Multiple sequence alignment - TraesCS2B01G158200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G158200 chr2B 100.000 3108 0 0 1 3108 132059353 132056246 0.000000e+00 5740
1 TraesCS2B01G158200 chr2B 87.158 2048 198 39 552 2558 608202001 608204024 0.000000e+00 2265
2 TraesCS2B01G158200 chr2B 99.080 435 3 1 123 557 495153126 495152693 0.000000e+00 780
3 TraesCS2B01G158200 chr5D 97.425 2563 56 7 553 3108 432216840 432219399 0.000000e+00 4359
4 TraesCS2B01G158200 chr5D 95.420 131 4 1 1 129 432216723 432216853 1.130000e-49 207
5 TraesCS2B01G158200 chr7B 87.250 2047 200 35 552 2558 270533643 270531618 0.000000e+00 2278
6 TraesCS2B01G158200 chr7B 79.745 706 135 6 1356 2056 747224566 747225268 3.580000e-139 505
7 TraesCS2B01G158200 chr2A 93.223 1446 57 11 1667 3108 704710380 704711788 0.000000e+00 2089
8 TraesCS2B01G158200 chr3B 81.795 2329 329 58 553 2853 68290774 68288513 0.000000e+00 1864
9 TraesCS2B01G158200 chr3B 85.877 878 111 8 1346 2213 525238927 525239801 0.000000e+00 922
10 TraesCS2B01G158200 chr3B 99.309 434 3 0 124 557 332929098 332928665 0.000000e+00 785
11 TraesCS2B01G158200 chr5A 85.455 880 113 10 1346 2213 522109986 522109110 0.000000e+00 902
12 TraesCS2B01G158200 chr5A 98.420 443 6 1 115 557 325690893 325691334 0.000000e+00 778
13 TraesCS2B01G158200 chr4B 87.500 768 93 2 1346 2111 618616206 618616972 0.000000e+00 883
14 TraesCS2B01G158200 chr6B 82.664 946 125 21 1345 2261 86409886 86408951 0.000000e+00 802
15 TraesCS2B01G158200 chr6B 98.633 439 4 2 119 557 671738654 671738218 0.000000e+00 776
16 TraesCS2B01G158200 chr6B 84.290 662 76 14 607 1258 86410614 86409971 3.400000e-174 621
17 TraesCS2B01G158200 chr1B 99.309 434 3 0 124 557 655769500 655769933 0.000000e+00 785
18 TraesCS2B01G158200 chr1B 76.354 1569 278 62 569 2110 170581064 170579562 0.000000e+00 756
19 TraesCS2B01G158200 chr1B 88.710 124 14 0 1 124 170581195 170581072 5.370000e-33 152
20 TraesCS2B01G158200 chr7A 99.535 430 2 0 128 557 281734728 281734299 0.000000e+00 784
21 TraesCS2B01G158200 chr6A 99.535 430 2 0 128 557 94260451 94260880 0.000000e+00 784
22 TraesCS2B01G158200 chr1A 99.535 430 2 0 128 557 7343542 7343113 0.000000e+00 784
23 TraesCS2B01G158200 chr1A 83.824 204 33 0 630 833 42499773 42499570 8.790000e-46 195
24 TraesCS2B01G158200 chr3A 98.858 438 4 1 120 557 482974287 482974723 0.000000e+00 780
25 TraesCS2B01G158200 chr7D 82.374 278 45 4 557 832 457114396 457114671 4.010000e-59 239
26 TraesCS2B01G158200 chr4D 80.894 246 45 2 559 803 508532332 508532088 3.160000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G158200 chr2B 132056246 132059353 3107 True 5740.0 5740 100.0000 1 3108 1 chr2B.!!$R1 3107
1 TraesCS2B01G158200 chr2B 608202001 608204024 2023 False 2265.0 2265 87.1580 552 2558 1 chr2B.!!$F1 2006
2 TraesCS2B01G158200 chr5D 432216723 432219399 2676 False 2283.0 4359 96.4225 1 3108 2 chr5D.!!$F1 3107
3 TraesCS2B01G158200 chr7B 270531618 270533643 2025 True 2278.0 2278 87.2500 552 2558 1 chr7B.!!$R1 2006
4 TraesCS2B01G158200 chr7B 747224566 747225268 702 False 505.0 505 79.7450 1356 2056 1 chr7B.!!$F1 700
5 TraesCS2B01G158200 chr2A 704710380 704711788 1408 False 2089.0 2089 93.2230 1667 3108 1 chr2A.!!$F1 1441
6 TraesCS2B01G158200 chr3B 68288513 68290774 2261 True 1864.0 1864 81.7950 553 2853 1 chr3B.!!$R1 2300
7 TraesCS2B01G158200 chr3B 525238927 525239801 874 False 922.0 922 85.8770 1346 2213 1 chr3B.!!$F1 867
8 TraesCS2B01G158200 chr5A 522109110 522109986 876 True 902.0 902 85.4550 1346 2213 1 chr5A.!!$R1 867
9 TraesCS2B01G158200 chr4B 618616206 618616972 766 False 883.0 883 87.5000 1346 2111 1 chr4B.!!$F1 765
10 TraesCS2B01G158200 chr6B 86408951 86410614 1663 True 711.5 802 83.4770 607 2261 2 chr6B.!!$R2 1654
11 TraesCS2B01G158200 chr1B 170579562 170581195 1633 True 454.0 756 82.5320 1 2110 2 chr1B.!!$R1 2109

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
371 374 0.026803 CATTCTCCGCACGCTTTAGC 59.973 55.0 0.00 0.0 37.78 3.09 F
511 514 0.033405 TTCCGGACTCGATCCTTCCT 60.033 55.0 1.83 0.0 46.69 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1861 1919 0.306533 GAGCTTTTCCGTTCGTTGCA 59.693 50.000 0.00 0.0 0.00 4.08 R
2473 2570 2.034687 GCTGTGGCCACATGGACT 59.965 61.111 37.66 0.0 45.91 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 64 1.689273 ACACGAAGAGGAGCAAGTTCT 59.311 47.619 0.00 0.00 0.00 3.01
115 118 4.202111 TGTTGACAGTTGATGAGTTCGAGA 60.202 41.667 0.00 0.00 0.00 4.04
116 119 3.902150 TGACAGTTGATGAGTTCGAGAC 58.098 45.455 0.00 0.00 0.00 3.36
117 120 3.570125 TGACAGTTGATGAGTTCGAGACT 59.430 43.478 0.71 0.71 42.70 3.24
118 121 4.760204 TGACAGTTGATGAGTTCGAGACTA 59.240 41.667 1.08 0.00 39.19 2.59
119 122 5.049398 ACAGTTGATGAGTTCGAGACTAC 57.951 43.478 1.08 0.00 39.19 2.73
120 123 4.519350 ACAGTTGATGAGTTCGAGACTACA 59.481 41.667 1.08 2.85 39.19 2.74
121 124 5.184096 ACAGTTGATGAGTTCGAGACTACAT 59.816 40.000 1.08 6.41 39.19 2.29
122 125 5.514559 CAGTTGATGAGTTCGAGACTACATG 59.485 44.000 0.00 0.00 39.19 3.21
123 126 4.639135 TGATGAGTTCGAGACTACATGG 57.361 45.455 0.00 0.00 39.19 3.66
124 127 4.270008 TGATGAGTTCGAGACTACATGGA 58.730 43.478 0.00 0.00 39.19 3.41
125 128 4.705023 TGATGAGTTCGAGACTACATGGAA 59.295 41.667 0.00 0.00 39.19 3.53
126 129 4.703645 TGAGTTCGAGACTACATGGAAG 57.296 45.455 0.00 0.00 39.19 3.46
127 130 3.119459 TGAGTTCGAGACTACATGGAAGC 60.119 47.826 0.00 0.00 39.19 3.86
128 131 2.826128 AGTTCGAGACTACATGGAAGCA 59.174 45.455 0.00 0.00 36.65 3.91
129 132 3.258372 AGTTCGAGACTACATGGAAGCAA 59.742 43.478 0.00 0.00 36.65 3.91
130 133 3.232213 TCGAGACTACATGGAAGCAAC 57.768 47.619 0.00 0.00 0.00 4.17
131 134 2.560981 TCGAGACTACATGGAAGCAACA 59.439 45.455 0.00 0.00 0.00 3.33
132 135 3.006430 TCGAGACTACATGGAAGCAACAA 59.994 43.478 0.00 0.00 0.00 2.83
133 136 3.123621 CGAGACTACATGGAAGCAACAAC 59.876 47.826 0.00 0.00 0.00 3.32
134 137 4.065088 GAGACTACATGGAAGCAACAACA 58.935 43.478 0.00 0.00 0.00 3.33
135 138 4.460263 AGACTACATGGAAGCAACAACAA 58.540 39.130 0.00 0.00 0.00 2.83
136 139 4.275936 AGACTACATGGAAGCAACAACAAC 59.724 41.667 0.00 0.00 0.00 3.32
137 140 3.951037 ACTACATGGAAGCAACAACAACA 59.049 39.130 0.00 0.00 0.00 3.33
138 141 3.883830 ACATGGAAGCAACAACAACAA 57.116 38.095 0.00 0.00 0.00 2.83
139 142 3.520569 ACATGGAAGCAACAACAACAAC 58.479 40.909 0.00 0.00 0.00 3.32
140 143 3.056250 ACATGGAAGCAACAACAACAACA 60.056 39.130 0.00 0.00 0.00 3.33
141 144 3.667497 TGGAAGCAACAACAACAACAA 57.333 38.095 0.00 0.00 0.00 2.83
142 145 3.321497 TGGAAGCAACAACAACAACAAC 58.679 40.909 0.00 0.00 0.00 3.32
143 146 3.243873 TGGAAGCAACAACAACAACAACA 60.244 39.130 0.00 0.00 0.00 3.33
144 147 3.743396 GGAAGCAACAACAACAACAACAA 59.257 39.130 0.00 0.00 0.00 2.83
145 148 4.376920 GGAAGCAACAACAACAACAACAAC 60.377 41.667 0.00 0.00 0.00 3.32
146 149 3.722147 AGCAACAACAACAACAACAACA 58.278 36.364 0.00 0.00 0.00 3.33
147 150 4.122776 AGCAACAACAACAACAACAACAA 58.877 34.783 0.00 0.00 0.00 2.83
148 151 4.025313 AGCAACAACAACAACAACAACAAC 60.025 37.500 0.00 0.00 0.00 3.32
149 152 4.260375 GCAACAACAACAACAACAACAACA 60.260 37.500 0.00 0.00 0.00 3.33
150 153 5.727791 GCAACAACAACAACAACAACAACAA 60.728 36.000 0.00 0.00 0.00 2.83
151 154 6.250819 CAACAACAACAACAACAACAACAAA 58.749 32.000 0.00 0.00 0.00 2.83
152 155 6.042144 ACAACAACAACAACAACAACAAAG 57.958 33.333 0.00 0.00 0.00 2.77
153 156 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
154 157 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
155 158 3.676291 ACAACAACAACAACAAAGCCT 57.324 38.095 0.00 0.00 0.00 4.58
156 159 4.001618 ACAACAACAACAACAAAGCCTT 57.998 36.364 0.00 0.00 0.00 4.35
157 160 4.384940 ACAACAACAACAACAAAGCCTTT 58.615 34.783 0.00 0.00 0.00 3.11
158 161 5.542779 ACAACAACAACAACAAAGCCTTTA 58.457 33.333 0.00 0.00 0.00 1.85
159 162 5.637387 ACAACAACAACAACAAAGCCTTTAG 59.363 36.000 0.00 0.00 0.00 1.85
160 163 5.400066 ACAACAACAACAAAGCCTTTAGT 57.600 34.783 0.00 0.00 0.00 2.24
161 164 5.407502 ACAACAACAACAAAGCCTTTAGTC 58.592 37.500 0.00 0.00 0.00 2.59
162 165 4.649088 ACAACAACAAAGCCTTTAGTCC 57.351 40.909 0.00 0.00 0.00 3.85
163 166 3.383505 ACAACAACAAAGCCTTTAGTCCC 59.616 43.478 0.00 0.00 0.00 4.46
164 167 3.306472 ACAACAAAGCCTTTAGTCCCA 57.694 42.857 0.00 0.00 0.00 4.37
165 168 3.637769 ACAACAAAGCCTTTAGTCCCAA 58.362 40.909 0.00 0.00 0.00 4.12
166 169 4.027437 ACAACAAAGCCTTTAGTCCCAAA 58.973 39.130 0.00 0.00 0.00 3.28
167 170 4.142026 ACAACAAAGCCTTTAGTCCCAAAC 60.142 41.667 0.00 0.00 0.00 2.93
168 171 3.637769 ACAAAGCCTTTAGTCCCAAACA 58.362 40.909 0.00 0.00 0.00 2.83
169 172 4.027437 ACAAAGCCTTTAGTCCCAAACAA 58.973 39.130 0.00 0.00 0.00 2.83
170 173 4.099419 ACAAAGCCTTTAGTCCCAAACAAG 59.901 41.667 0.00 0.00 0.00 3.16
171 174 3.595190 AGCCTTTAGTCCCAAACAAGT 57.405 42.857 0.00 0.00 0.00 3.16
172 175 3.910989 AGCCTTTAGTCCCAAACAAGTT 58.089 40.909 0.00 0.00 0.00 2.66
173 176 3.636764 AGCCTTTAGTCCCAAACAAGTTG 59.363 43.478 0.00 0.00 36.94 3.16
182 185 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
183 186 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
184 187 3.081804 CAAACAAGTTGGGGTAGGCTAG 58.918 50.000 7.96 0.00 33.18 3.42
185 188 2.337359 ACAAGTTGGGGTAGGCTAGA 57.663 50.000 7.96 0.00 0.00 2.43
186 189 2.188817 ACAAGTTGGGGTAGGCTAGAG 58.811 52.381 7.96 0.00 0.00 2.43
187 190 1.486726 CAAGTTGGGGTAGGCTAGAGG 59.513 57.143 0.00 0.00 0.00 3.69
188 191 0.717196 AGTTGGGGTAGGCTAGAGGT 59.283 55.000 0.00 0.00 0.00 3.85
189 192 0.831307 GTTGGGGTAGGCTAGAGGTG 59.169 60.000 0.00 0.00 0.00 4.00
190 193 0.714180 TTGGGGTAGGCTAGAGGTGA 59.286 55.000 0.00 0.00 0.00 4.02
191 194 0.714180 TGGGGTAGGCTAGAGGTGAA 59.286 55.000 0.00 0.00 0.00 3.18
192 195 1.079825 TGGGGTAGGCTAGAGGTGAAA 59.920 52.381 0.00 0.00 0.00 2.69
193 196 1.485480 GGGGTAGGCTAGAGGTGAAAC 59.515 57.143 0.00 0.00 0.00 2.78
208 211 3.531538 GTGAAACCCATAAGATCTCGCA 58.468 45.455 0.00 0.00 0.00 5.10
209 212 3.938963 GTGAAACCCATAAGATCTCGCAA 59.061 43.478 0.00 0.00 0.00 4.85
210 213 3.938963 TGAAACCCATAAGATCTCGCAAC 59.061 43.478 0.00 0.00 0.00 4.17
211 214 2.622064 ACCCATAAGATCTCGCAACC 57.378 50.000 0.00 0.00 0.00 3.77
212 215 1.837439 ACCCATAAGATCTCGCAACCA 59.163 47.619 0.00 0.00 0.00 3.67
213 216 2.238646 ACCCATAAGATCTCGCAACCAA 59.761 45.455 0.00 0.00 0.00 3.67
214 217 2.614057 CCCATAAGATCTCGCAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
215 218 3.535561 CCATAAGATCTCGCAACCAACT 58.464 45.455 0.00 0.00 0.00 3.16
216 219 3.557595 CCATAAGATCTCGCAACCAACTC 59.442 47.826 0.00 0.00 0.00 3.01
217 220 2.839486 AAGATCTCGCAACCAACTCA 57.161 45.000 0.00 0.00 0.00 3.41
218 221 3.340814 AAGATCTCGCAACCAACTCAT 57.659 42.857 0.00 0.00 0.00 2.90
219 222 2.625737 AGATCTCGCAACCAACTCATG 58.374 47.619 0.00 0.00 0.00 3.07
227 230 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85
228 231 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
229 232 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
230 233 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
231 234 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
232 235 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
233 236 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
234 237 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
235 238 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
236 239 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
237 240 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
238 241 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
239 242 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
240 243 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
241 244 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
242 245 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
243 246 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
244 247 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
245 248 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
246 249 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
247 250 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
248 251 2.357009 CACATGGATAGCAAGCTTCCAC 59.643 50.000 20.41 0.00 42.09 4.02
249 252 1.600957 CATGGATAGCAAGCTTCCACG 59.399 52.381 20.41 13.24 42.09 4.94
250 253 0.744414 TGGATAGCAAGCTTCCACGC 60.744 55.000 16.61 0.00 34.65 5.34
251 254 0.744414 GGATAGCAAGCTTCCACGCA 60.744 55.000 8.96 0.00 0.00 5.24
252 255 0.375106 GATAGCAAGCTTCCACGCAC 59.625 55.000 8.96 0.00 0.00 5.34
253 256 1.026718 ATAGCAAGCTTCCACGCACC 61.027 55.000 8.96 0.00 0.00 5.01
254 257 4.043200 GCAAGCTTCCACGCACCC 62.043 66.667 0.00 0.00 0.00 4.61
255 258 3.365265 CAAGCTTCCACGCACCCC 61.365 66.667 0.00 0.00 0.00 4.95
256 259 3.570212 AAGCTTCCACGCACCCCT 61.570 61.111 0.00 0.00 0.00 4.79
257 260 3.850098 AAGCTTCCACGCACCCCTG 62.850 63.158 0.00 0.00 0.00 4.45
258 261 4.643387 GCTTCCACGCACCCCTGT 62.643 66.667 0.00 0.00 0.00 4.00
259 262 2.358737 CTTCCACGCACCCCTGTC 60.359 66.667 0.00 0.00 0.00 3.51
260 263 3.901797 CTTCCACGCACCCCTGTCC 62.902 68.421 0.00 0.00 0.00 4.02
262 265 4.033776 CCACGCACCCCTGTCCAT 62.034 66.667 0.00 0.00 0.00 3.41
263 266 2.665089 CCACGCACCCCTGTCCATA 61.665 63.158 0.00 0.00 0.00 2.74
264 267 1.153369 CACGCACCCCTGTCCATAG 60.153 63.158 0.00 0.00 0.00 2.23
265 268 2.203070 CGCACCCCTGTCCATAGC 60.203 66.667 0.00 0.00 0.00 2.97
266 269 2.735772 CGCACCCCTGTCCATAGCT 61.736 63.158 0.00 0.00 0.00 3.32
267 270 1.399744 CGCACCCCTGTCCATAGCTA 61.400 60.000 0.00 0.00 0.00 3.32
268 271 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
269 272 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
270 273 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
271 274 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
272 275 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
273 276 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
274 277 2.703007 CCCTGTCCATAGCTAGCTCTTT 59.297 50.000 23.26 4.57 0.00 2.52
275 278 3.494048 CCCTGTCCATAGCTAGCTCTTTG 60.494 52.174 23.26 16.78 0.00 2.77
276 279 3.133721 CCTGTCCATAGCTAGCTCTTTGT 59.866 47.826 23.26 0.00 0.00 2.83
277 280 4.367450 CTGTCCATAGCTAGCTCTTTGTC 58.633 47.826 23.26 12.44 0.00 3.18
278 281 3.181486 TGTCCATAGCTAGCTCTTTGTCG 60.181 47.826 23.26 6.37 0.00 4.35
279 282 3.066900 GTCCATAGCTAGCTCTTTGTCGA 59.933 47.826 23.26 8.50 0.00 4.20
280 283 3.891977 TCCATAGCTAGCTCTTTGTCGAT 59.108 43.478 23.26 3.19 0.00 3.59
281 284 5.048643 GTCCATAGCTAGCTCTTTGTCGATA 60.049 44.000 23.26 0.00 0.00 2.92
282 285 5.048643 TCCATAGCTAGCTCTTTGTCGATAC 60.049 44.000 23.26 0.00 0.00 2.24
283 286 5.048364 CCATAGCTAGCTCTTTGTCGATACT 60.048 44.000 23.26 0.00 0.00 2.12
284 287 4.561735 AGCTAGCTCTTTGTCGATACTC 57.438 45.455 12.68 0.00 0.00 2.59
285 288 3.316868 AGCTAGCTCTTTGTCGATACTCC 59.683 47.826 12.68 0.00 0.00 3.85
286 289 3.066900 GCTAGCTCTTTGTCGATACTCCA 59.933 47.826 7.70 0.00 0.00 3.86
287 290 4.440250 GCTAGCTCTTTGTCGATACTCCAA 60.440 45.833 7.70 0.00 0.00 3.53
288 291 4.744795 AGCTCTTTGTCGATACTCCAAT 57.255 40.909 0.00 0.00 0.00 3.16
289 292 4.688021 AGCTCTTTGTCGATACTCCAATC 58.312 43.478 0.00 0.00 0.00 2.67
290 293 3.804873 GCTCTTTGTCGATACTCCAATCC 59.195 47.826 0.00 0.00 0.00 3.01
291 294 4.442192 GCTCTTTGTCGATACTCCAATCCT 60.442 45.833 0.00 0.00 0.00 3.24
292 295 5.665459 CTCTTTGTCGATACTCCAATCCTT 58.335 41.667 0.00 0.00 0.00 3.36
293 296 5.661458 TCTTTGTCGATACTCCAATCCTTC 58.339 41.667 0.00 0.00 0.00 3.46
294 297 5.186992 TCTTTGTCGATACTCCAATCCTTCA 59.813 40.000 0.00 0.00 0.00 3.02
295 298 4.655762 TGTCGATACTCCAATCCTTCAG 57.344 45.455 0.00 0.00 0.00 3.02
296 299 3.384789 TGTCGATACTCCAATCCTTCAGG 59.615 47.826 0.00 0.00 0.00 3.86
297 300 3.385111 GTCGATACTCCAATCCTTCAGGT 59.615 47.826 0.00 0.00 36.34 4.00
298 301 3.637229 TCGATACTCCAATCCTTCAGGTC 59.363 47.826 0.00 0.00 36.34 3.85
299 302 3.639094 CGATACTCCAATCCTTCAGGTCT 59.361 47.826 0.00 0.00 36.34 3.85
300 303 4.261825 CGATACTCCAATCCTTCAGGTCTC 60.262 50.000 0.00 0.00 36.34 3.36
301 304 3.197927 ACTCCAATCCTTCAGGTCTCT 57.802 47.619 0.00 0.00 36.34 3.10
302 305 3.103742 ACTCCAATCCTTCAGGTCTCTC 58.896 50.000 0.00 0.00 36.34 3.20
303 306 3.245948 ACTCCAATCCTTCAGGTCTCTCT 60.246 47.826 0.00 0.00 36.34 3.10
304 307 3.774216 CTCCAATCCTTCAGGTCTCTCTT 59.226 47.826 0.00 0.00 36.34 2.85
305 308 4.947883 TCCAATCCTTCAGGTCTCTCTTA 58.052 43.478 0.00 0.00 36.34 2.10
306 309 5.342017 TCCAATCCTTCAGGTCTCTCTTAA 58.658 41.667 0.00 0.00 36.34 1.85
307 310 5.187967 TCCAATCCTTCAGGTCTCTCTTAAC 59.812 44.000 0.00 0.00 36.34 2.01
308 311 4.993029 ATCCTTCAGGTCTCTCTTAACG 57.007 45.455 0.00 0.00 36.34 3.18
309 312 3.090037 TCCTTCAGGTCTCTCTTAACGG 58.910 50.000 0.00 0.00 36.34 4.44
310 313 3.090037 CCTTCAGGTCTCTCTTAACGGA 58.910 50.000 0.00 0.00 0.00 4.69
311 314 3.119424 CCTTCAGGTCTCTCTTAACGGAC 60.119 52.174 0.00 0.00 0.00 4.79
312 315 3.436577 TCAGGTCTCTCTTAACGGACT 57.563 47.619 0.00 0.00 0.00 3.85
313 316 3.345414 TCAGGTCTCTCTTAACGGACTC 58.655 50.000 0.00 0.00 0.00 3.36
314 317 2.424246 CAGGTCTCTCTTAACGGACTCC 59.576 54.545 0.00 0.00 0.00 3.85
315 318 2.309458 AGGTCTCTCTTAACGGACTCCT 59.691 50.000 0.00 0.00 0.00 3.69
316 319 2.684374 GGTCTCTCTTAACGGACTCCTC 59.316 54.545 0.00 0.00 0.00 3.71
317 320 2.684374 GTCTCTCTTAACGGACTCCTCC 59.316 54.545 0.00 0.00 0.00 4.30
318 321 2.025898 CTCTCTTAACGGACTCCTCCC 58.974 57.143 0.00 0.00 31.93 4.30
319 322 1.356738 TCTCTTAACGGACTCCTCCCA 59.643 52.381 0.00 0.00 31.93 4.37
320 323 2.024273 TCTCTTAACGGACTCCTCCCAT 60.024 50.000 0.00 0.00 31.93 4.00
321 324 2.101582 CTCTTAACGGACTCCTCCCATG 59.898 54.545 0.00 0.00 31.93 3.66
322 325 1.831736 CTTAACGGACTCCTCCCATGT 59.168 52.381 0.00 0.00 31.93 3.21
323 326 1.481871 TAACGGACTCCTCCCATGTC 58.518 55.000 0.00 0.00 31.93 3.06
324 327 0.544357 AACGGACTCCTCCCATGTCA 60.544 55.000 0.00 0.00 31.93 3.58
325 328 0.544357 ACGGACTCCTCCCATGTCAA 60.544 55.000 0.00 0.00 31.93 3.18
326 329 0.613260 CGGACTCCTCCCATGTCAAA 59.387 55.000 0.00 0.00 31.93 2.69
327 330 1.003118 CGGACTCCTCCCATGTCAAAA 59.997 52.381 0.00 0.00 31.93 2.44
328 331 2.356125 CGGACTCCTCCCATGTCAAAAT 60.356 50.000 0.00 0.00 31.93 1.82
329 332 3.282885 GGACTCCTCCCATGTCAAAATC 58.717 50.000 0.00 0.00 32.84 2.17
330 333 2.939103 GACTCCTCCCATGTCAAAATCG 59.061 50.000 0.00 0.00 0.00 3.34
331 334 2.292267 CTCCTCCCATGTCAAAATCGG 58.708 52.381 0.00 0.00 0.00 4.18
332 335 1.633432 TCCTCCCATGTCAAAATCGGT 59.367 47.619 0.00 0.00 0.00 4.69
333 336 2.017049 CCTCCCATGTCAAAATCGGTC 58.983 52.381 0.00 0.00 0.00 4.79
334 337 1.665679 CTCCCATGTCAAAATCGGTCG 59.334 52.381 0.00 0.00 0.00 4.79
335 338 1.276705 TCCCATGTCAAAATCGGTCGA 59.723 47.619 0.00 0.00 0.00 4.20
336 339 1.396996 CCCATGTCAAAATCGGTCGAC 59.603 52.381 7.13 7.13 0.00 4.20
337 340 1.396996 CCATGTCAAAATCGGTCGACC 59.603 52.381 25.28 25.28 0.00 4.79
338 341 1.396996 CATGTCAAAATCGGTCGACCC 59.603 52.381 28.52 12.33 0.00 4.46
339 342 0.320946 TGTCAAAATCGGTCGACCCC 60.321 55.000 28.52 5.39 0.00 4.95
349 352 4.377760 TCGACCCCGCCCTCTCTT 62.378 66.667 0.00 0.00 35.37 2.85
350 353 4.148825 CGACCCCGCCCTCTCTTG 62.149 72.222 0.00 0.00 0.00 3.02
351 354 2.683933 GACCCCGCCCTCTCTTGA 60.684 66.667 0.00 0.00 0.00 3.02
352 355 3.003763 ACCCCGCCCTCTCTTGAC 61.004 66.667 0.00 0.00 0.00 3.18
353 356 3.003173 CCCCGCCCTCTCTTGACA 61.003 66.667 0.00 0.00 0.00 3.58
354 357 2.370445 CCCCGCCCTCTCTTGACAT 61.370 63.158 0.00 0.00 0.00 3.06
355 358 1.604378 CCCGCCCTCTCTTGACATT 59.396 57.895 0.00 0.00 0.00 2.71
356 359 0.462759 CCCGCCCTCTCTTGACATTC 60.463 60.000 0.00 0.00 0.00 2.67
357 360 0.539051 CCGCCCTCTCTTGACATTCT 59.461 55.000 0.00 0.00 0.00 2.40
358 361 1.472376 CCGCCCTCTCTTGACATTCTC 60.472 57.143 0.00 0.00 0.00 2.87
359 362 1.472376 CGCCCTCTCTTGACATTCTCC 60.472 57.143 0.00 0.00 0.00 3.71
360 363 1.472376 GCCCTCTCTTGACATTCTCCG 60.472 57.143 0.00 0.00 0.00 4.63
361 364 1.472376 CCCTCTCTTGACATTCTCCGC 60.472 57.143 0.00 0.00 0.00 5.54
362 365 1.205655 CCTCTCTTGACATTCTCCGCA 59.794 52.381 0.00 0.00 0.00 5.69
363 366 2.266554 CTCTCTTGACATTCTCCGCAC 58.733 52.381 0.00 0.00 0.00 5.34
364 367 0.994995 CTCTTGACATTCTCCGCACG 59.005 55.000 0.00 0.00 0.00 5.34
365 368 1.014044 TCTTGACATTCTCCGCACGC 61.014 55.000 0.00 0.00 0.00 5.34
366 369 1.005037 TTGACATTCTCCGCACGCT 60.005 52.632 0.00 0.00 0.00 5.07
367 370 0.602638 TTGACATTCTCCGCACGCTT 60.603 50.000 0.00 0.00 0.00 4.68
368 371 0.602638 TGACATTCTCCGCACGCTTT 60.603 50.000 0.00 0.00 0.00 3.51
369 372 1.337354 TGACATTCTCCGCACGCTTTA 60.337 47.619 0.00 0.00 0.00 1.85
370 373 1.324736 GACATTCTCCGCACGCTTTAG 59.675 52.381 0.00 0.00 0.00 1.85
371 374 0.026803 CATTCTCCGCACGCTTTAGC 59.973 55.000 0.00 0.00 37.78 3.09
372 375 1.090052 ATTCTCCGCACGCTTTAGCC 61.090 55.000 0.00 0.00 37.91 3.93
373 376 3.554692 CTCCGCACGCTTTAGCCG 61.555 66.667 0.00 0.00 37.91 5.52
374 377 4.367023 TCCGCACGCTTTAGCCGT 62.367 61.111 0.00 0.00 37.91 5.68
375 378 3.849953 CCGCACGCTTTAGCCGTC 61.850 66.667 0.00 0.00 37.91 4.79
376 379 3.849953 CGCACGCTTTAGCCGTCC 61.850 66.667 0.00 0.00 37.91 4.79
377 380 3.849953 GCACGCTTTAGCCGTCCG 61.850 66.667 0.00 0.00 37.91 4.79
378 381 3.849953 CACGCTTTAGCCGTCCGC 61.850 66.667 0.00 0.00 37.91 5.54
387 390 3.264897 GCCGTCCGCTATGCACTG 61.265 66.667 0.00 0.00 0.00 3.66
388 391 2.586079 CCGTCCGCTATGCACTGG 60.586 66.667 0.00 0.00 0.00 4.00
389 392 2.494445 CGTCCGCTATGCACTGGA 59.506 61.111 0.00 0.00 0.00 3.86
390 393 1.589993 CGTCCGCTATGCACTGGAG 60.590 63.158 0.00 0.00 0.00 3.86
391 394 1.884926 GTCCGCTATGCACTGGAGC 60.885 63.158 0.00 0.00 0.00 4.70
392 395 2.060383 TCCGCTATGCACTGGAGCT 61.060 57.895 9.31 0.00 33.91 4.09
393 396 1.153289 CCGCTATGCACTGGAGCTT 60.153 57.895 9.31 0.00 33.91 3.74
394 397 1.156645 CCGCTATGCACTGGAGCTTC 61.157 60.000 9.31 0.00 33.91 3.86
395 398 0.179089 CGCTATGCACTGGAGCTTCT 60.179 55.000 9.31 0.00 33.91 2.85
396 399 1.297664 GCTATGCACTGGAGCTTCTG 58.702 55.000 0.00 0.00 33.28 3.02
397 400 1.950828 CTATGCACTGGAGCTTCTGG 58.049 55.000 3.68 0.00 34.99 3.86
398 401 1.483827 CTATGCACTGGAGCTTCTGGA 59.516 52.381 3.68 0.00 34.99 3.86
399 402 0.252479 ATGCACTGGAGCTTCTGGAG 59.748 55.000 3.68 0.00 34.99 3.86
400 403 1.078567 GCACTGGAGCTTCTGGAGG 60.079 63.158 3.68 0.00 0.00 4.30
401 404 1.835927 GCACTGGAGCTTCTGGAGGT 61.836 60.000 3.68 0.00 39.22 3.85
406 409 2.977178 AGCTTCTGGAGGTCAGCG 59.023 61.111 0.00 0.00 43.06 5.18
407 410 2.817396 GCTTCTGGAGGTCAGCGC 60.817 66.667 0.00 0.00 43.06 5.92
408 411 2.977178 CTTCTGGAGGTCAGCGCT 59.023 61.111 2.64 2.64 43.06 5.92
409 412 1.447489 CTTCTGGAGGTCAGCGCTG 60.447 63.158 31.53 31.53 43.06 5.18
410 413 1.881903 CTTCTGGAGGTCAGCGCTGA 61.882 60.000 35.30 35.30 43.06 4.26
411 414 1.471829 TTCTGGAGGTCAGCGCTGAA 61.472 55.000 39.63 23.63 43.06 3.02
412 415 1.220206 CTGGAGGTCAGCGCTGAAT 59.780 57.895 39.63 30.45 41.85 2.57
413 416 0.461548 CTGGAGGTCAGCGCTGAATA 59.538 55.000 39.63 22.18 41.85 1.75
414 417 1.069823 CTGGAGGTCAGCGCTGAATAT 59.930 52.381 39.63 27.57 41.85 1.28
415 418 1.202568 TGGAGGTCAGCGCTGAATATG 60.203 52.381 39.63 14.07 41.85 1.78
416 419 0.864455 GAGGTCAGCGCTGAATATGC 59.136 55.000 39.63 26.34 41.85 3.14
417 420 0.533755 AGGTCAGCGCTGAATATGCC 60.534 55.000 39.63 32.97 41.85 4.40
418 421 1.510480 GGTCAGCGCTGAATATGCCC 61.510 60.000 39.63 29.97 41.85 5.36
419 422 0.815213 GTCAGCGCTGAATATGCCCA 60.815 55.000 39.63 13.79 41.85 5.36
420 423 0.107263 TCAGCGCTGAATATGCCCAA 60.107 50.000 36.62 10.98 36.53 4.12
421 424 0.740149 CAGCGCTGAATATGCCCAAA 59.260 50.000 33.66 0.00 0.00 3.28
422 425 0.740737 AGCGCTGAATATGCCCAAAC 59.259 50.000 10.39 0.00 0.00 2.93
423 426 0.249031 GCGCTGAATATGCCCAAACC 60.249 55.000 0.00 0.00 0.00 3.27
424 427 1.102154 CGCTGAATATGCCCAAACCA 58.898 50.000 0.00 0.00 0.00 3.67
425 428 1.682854 CGCTGAATATGCCCAAACCAT 59.317 47.619 0.00 0.00 0.00 3.55
426 429 2.287788 CGCTGAATATGCCCAAACCATC 60.288 50.000 0.00 0.00 0.00 3.51
427 430 2.961062 GCTGAATATGCCCAAACCATCT 59.039 45.455 0.00 0.00 0.00 2.90
428 431 3.005155 GCTGAATATGCCCAAACCATCTC 59.995 47.826 0.00 0.00 0.00 2.75
429 432 4.209538 CTGAATATGCCCAAACCATCTCA 58.790 43.478 0.00 0.00 0.00 3.27
430 433 4.608269 TGAATATGCCCAAACCATCTCAA 58.392 39.130 0.00 0.00 0.00 3.02
431 434 5.022122 TGAATATGCCCAAACCATCTCAAA 58.978 37.500 0.00 0.00 0.00 2.69
432 435 5.105392 TGAATATGCCCAAACCATCTCAAAC 60.105 40.000 0.00 0.00 0.00 2.93
433 436 0.958091 TGCCCAAACCATCTCAAACG 59.042 50.000 0.00 0.00 0.00 3.60
434 437 1.243902 GCCCAAACCATCTCAAACGA 58.756 50.000 0.00 0.00 0.00 3.85
435 438 1.818674 GCCCAAACCATCTCAAACGAT 59.181 47.619 0.00 0.00 0.00 3.73
436 439 2.415893 GCCCAAACCATCTCAAACGATG 60.416 50.000 0.00 0.00 40.32 3.84
437 440 2.819608 CCCAAACCATCTCAAACGATGT 59.180 45.455 0.00 0.00 39.26 3.06
438 441 3.255642 CCCAAACCATCTCAAACGATGTT 59.744 43.478 0.00 0.00 39.26 2.71
439 442 4.229096 CCAAACCATCTCAAACGATGTTG 58.771 43.478 0.00 0.00 39.26 3.33
440 443 4.229096 CAAACCATCTCAAACGATGTTGG 58.771 43.478 0.00 0.70 39.26 3.77
441 444 3.417069 ACCATCTCAAACGATGTTGGA 57.583 42.857 0.00 0.00 39.26 3.53
442 445 3.074412 ACCATCTCAAACGATGTTGGAC 58.926 45.455 0.00 0.00 39.26 4.02
443 446 3.073678 CCATCTCAAACGATGTTGGACA 58.926 45.455 0.00 0.00 39.26 4.02
444 447 3.501828 CCATCTCAAACGATGTTGGACAA 59.498 43.478 0.00 0.00 39.26 3.18
445 448 4.378770 CCATCTCAAACGATGTTGGACAAG 60.379 45.833 0.00 0.00 39.26 3.16
446 449 2.548057 TCTCAAACGATGTTGGACAAGC 59.452 45.455 0.00 0.00 0.00 4.01
447 450 2.549754 CTCAAACGATGTTGGACAAGCT 59.450 45.455 0.00 0.00 0.00 3.74
448 451 2.948979 TCAAACGATGTTGGACAAGCTT 59.051 40.909 0.00 0.00 0.00 3.74
449 452 3.003275 TCAAACGATGTTGGACAAGCTTC 59.997 43.478 0.00 0.00 0.00 3.86
450 453 2.550830 ACGATGTTGGACAAGCTTCT 57.449 45.000 0.00 0.00 0.00 2.85
451 454 2.417719 ACGATGTTGGACAAGCTTCTC 58.582 47.619 0.00 0.00 0.00 2.87
452 455 1.734465 CGATGTTGGACAAGCTTCTCC 59.266 52.381 13.47 13.47 0.00 3.71
453 456 2.613977 CGATGTTGGACAAGCTTCTCCT 60.614 50.000 19.96 1.39 0.00 3.69
454 457 2.550830 TGTTGGACAAGCTTCTCCTC 57.449 50.000 19.96 13.65 0.00 3.71
455 458 1.768275 TGTTGGACAAGCTTCTCCTCA 59.232 47.619 19.96 15.67 0.00 3.86
456 459 2.172505 TGTTGGACAAGCTTCTCCTCAA 59.827 45.455 19.96 5.96 0.00 3.02
457 460 3.181440 TGTTGGACAAGCTTCTCCTCAAT 60.181 43.478 19.96 0.00 0.00 2.57
458 461 3.795688 TGGACAAGCTTCTCCTCAATT 57.204 42.857 19.96 0.00 0.00 2.32
459 462 3.415212 TGGACAAGCTTCTCCTCAATTG 58.585 45.455 19.96 0.00 0.00 2.32
460 463 2.751806 GGACAAGCTTCTCCTCAATTGG 59.248 50.000 13.12 0.00 0.00 3.16
461 464 3.416156 GACAAGCTTCTCCTCAATTGGT 58.584 45.455 5.42 0.00 0.00 3.67
462 465 3.152341 ACAAGCTTCTCCTCAATTGGTG 58.848 45.455 5.42 0.00 0.00 4.17
463 466 1.831580 AGCTTCTCCTCAATTGGTGC 58.168 50.000 5.42 0.62 0.00 5.01
464 467 1.353694 AGCTTCTCCTCAATTGGTGCT 59.646 47.619 5.42 2.81 0.00 4.40
465 468 2.573462 AGCTTCTCCTCAATTGGTGCTA 59.427 45.455 5.42 0.00 0.00 3.49
466 469 2.680339 GCTTCTCCTCAATTGGTGCTAC 59.320 50.000 5.42 0.00 0.00 3.58
467 470 3.274288 CTTCTCCTCAATTGGTGCTACC 58.726 50.000 5.42 0.00 39.22 3.18
468 471 1.559682 TCTCCTCAATTGGTGCTACCC 59.440 52.381 5.42 0.00 37.50 3.69
469 472 0.623723 TCCTCAATTGGTGCTACCCC 59.376 55.000 5.42 0.00 37.50 4.95
470 473 0.331278 CCTCAATTGGTGCTACCCCA 59.669 55.000 5.42 0.00 37.50 4.96
471 474 1.272425 CCTCAATTGGTGCTACCCCAA 60.272 52.381 5.42 0.00 45.55 4.12
472 475 1.818674 CTCAATTGGTGCTACCCCAAC 59.181 52.381 5.42 0.00 44.36 3.77
473 476 1.427368 TCAATTGGTGCTACCCCAACT 59.573 47.619 5.42 0.00 44.36 3.16
474 477 1.818674 CAATTGGTGCTACCCCAACTC 59.181 52.381 0.00 0.00 44.36 3.01
475 478 1.372501 ATTGGTGCTACCCCAACTCT 58.627 50.000 0.00 0.00 44.36 3.24
476 479 2.032965 TTGGTGCTACCCCAACTCTA 57.967 50.000 3.33 0.00 37.50 2.43
477 480 2.263895 TGGTGCTACCCCAACTCTAT 57.736 50.000 3.33 0.00 37.50 1.98
478 481 2.116238 TGGTGCTACCCCAACTCTATC 58.884 52.381 3.33 0.00 37.50 2.08
479 482 2.292918 TGGTGCTACCCCAACTCTATCT 60.293 50.000 3.33 0.00 37.50 1.98
480 483 2.365941 GGTGCTACCCCAACTCTATCTC 59.634 54.545 0.00 0.00 30.04 2.75
481 484 2.034812 GTGCTACCCCAACTCTATCTCG 59.965 54.545 0.00 0.00 0.00 4.04
482 485 2.308690 GCTACCCCAACTCTATCTCGT 58.691 52.381 0.00 0.00 0.00 4.18
483 486 3.117776 TGCTACCCCAACTCTATCTCGTA 60.118 47.826 0.00 0.00 0.00 3.43
484 487 4.080687 GCTACCCCAACTCTATCTCGTAT 58.919 47.826 0.00 0.00 0.00 3.06
485 488 5.221986 TGCTACCCCAACTCTATCTCGTATA 60.222 44.000 0.00 0.00 0.00 1.47
486 489 5.887035 GCTACCCCAACTCTATCTCGTATAT 59.113 44.000 0.00 0.00 0.00 0.86
487 490 6.038492 GCTACCCCAACTCTATCTCGTATATC 59.962 46.154 0.00 0.00 0.00 1.63
488 491 5.888901 ACCCCAACTCTATCTCGTATATCA 58.111 41.667 0.00 0.00 0.00 2.15
489 492 6.494952 ACCCCAACTCTATCTCGTATATCAT 58.505 40.000 0.00 0.00 0.00 2.45
490 493 6.603997 ACCCCAACTCTATCTCGTATATCATC 59.396 42.308 0.00 0.00 0.00 2.92
491 494 6.603599 CCCCAACTCTATCTCGTATATCATCA 59.396 42.308 0.00 0.00 0.00 3.07
492 495 7.286546 CCCCAACTCTATCTCGTATATCATCAT 59.713 40.741 0.00 0.00 0.00 2.45
493 496 8.690884 CCCAACTCTATCTCGTATATCATCATT 58.309 37.037 0.00 0.00 0.00 2.57
494 497 9.729023 CCAACTCTATCTCGTATATCATCATTC 57.271 37.037 0.00 0.00 0.00 2.67
495 498 9.729023 CAACTCTATCTCGTATATCATCATTCC 57.271 37.037 0.00 0.00 0.00 3.01
496 499 8.148807 ACTCTATCTCGTATATCATCATTCCG 57.851 38.462 0.00 0.00 0.00 4.30
497 500 7.227711 ACTCTATCTCGTATATCATCATTCCGG 59.772 40.741 0.00 0.00 0.00 5.14
498 501 7.280356 TCTATCTCGTATATCATCATTCCGGA 58.720 38.462 0.00 0.00 0.00 5.14
499 502 5.562506 TCTCGTATATCATCATTCCGGAC 57.437 43.478 1.83 0.00 0.00 4.79
500 503 5.254115 TCTCGTATATCATCATTCCGGACT 58.746 41.667 1.83 0.00 0.00 3.85
501 504 5.354513 TCTCGTATATCATCATTCCGGACTC 59.645 44.000 1.83 0.00 0.00 3.36
502 505 4.094442 TCGTATATCATCATTCCGGACTCG 59.906 45.833 1.83 0.00 0.00 4.18
503 506 4.094442 CGTATATCATCATTCCGGACTCGA 59.906 45.833 1.83 0.34 39.00 4.04
504 507 5.220873 CGTATATCATCATTCCGGACTCGAT 60.221 44.000 1.83 3.28 39.00 3.59
505 508 3.584406 ATCATCATTCCGGACTCGATC 57.416 47.619 1.83 0.00 39.00 3.69
506 509 1.613925 TCATCATTCCGGACTCGATCC 59.386 52.381 1.83 4.37 45.20 3.36
507 510 1.615883 CATCATTCCGGACTCGATCCT 59.384 52.381 1.83 0.00 46.69 3.24
508 511 1.776662 TCATTCCGGACTCGATCCTT 58.223 50.000 1.83 0.00 46.69 3.36
509 512 1.681793 TCATTCCGGACTCGATCCTTC 59.318 52.381 1.83 0.00 46.69 3.46
510 513 1.041437 ATTCCGGACTCGATCCTTCC 58.959 55.000 1.83 3.28 46.69 3.46
511 514 0.033405 TTCCGGACTCGATCCTTCCT 60.033 55.000 1.83 0.00 46.69 3.36
512 515 0.465824 TCCGGACTCGATCCTTCCTC 60.466 60.000 0.00 0.00 46.69 3.71
513 516 1.649815 CGGACTCGATCCTTCCTCG 59.350 63.158 10.77 0.00 46.69 4.63
514 517 1.096386 CGGACTCGATCCTTCCTCGT 61.096 60.000 10.77 0.00 46.69 4.18
515 518 0.382515 GGACTCGATCCTTCCTCGTG 59.617 60.000 6.63 0.00 45.22 4.35
516 519 1.096416 GACTCGATCCTTCCTCGTGT 58.904 55.000 0.70 0.70 43.19 4.49
517 520 0.811915 ACTCGATCCTTCCTCGTGTG 59.188 55.000 0.34 0.00 40.21 3.82
518 521 0.101399 CTCGATCCTTCCTCGTGTGG 59.899 60.000 0.00 0.00 37.40 4.17
519 522 1.519455 CGATCCTTCCTCGTGTGGC 60.519 63.158 0.00 0.00 0.00 5.01
520 523 1.153349 GATCCTTCCTCGTGTGGCC 60.153 63.158 0.00 0.00 0.00 5.36
521 524 1.899437 GATCCTTCCTCGTGTGGCCA 61.899 60.000 0.00 0.00 0.00 5.36
522 525 2.185310 ATCCTTCCTCGTGTGGCCAC 62.185 60.000 29.67 29.67 38.27 5.01
523 526 2.425592 CTTCCTCGTGTGGCCACA 59.574 61.111 34.74 34.74 41.93 4.17
533 536 2.785868 GTGGCCACACATCCATCTC 58.214 57.895 31.23 0.00 46.90 2.75
534 537 0.035152 GTGGCCACACATCCATCTCA 60.035 55.000 31.23 0.00 46.90 3.27
535 538 0.697658 TGGCCACACATCCATCTCAA 59.302 50.000 0.00 0.00 0.00 3.02
536 539 1.098050 GGCCACACATCCATCTCAAC 58.902 55.000 0.00 0.00 0.00 3.18
537 540 1.614051 GGCCACACATCCATCTCAACA 60.614 52.381 0.00 0.00 0.00 3.33
538 541 2.372264 GCCACACATCCATCTCAACAT 58.628 47.619 0.00 0.00 0.00 2.71
539 542 3.544684 GCCACACATCCATCTCAACATA 58.455 45.455 0.00 0.00 0.00 2.29
540 543 3.313526 GCCACACATCCATCTCAACATAC 59.686 47.826 0.00 0.00 0.00 2.39
541 544 3.557185 CCACACATCCATCTCAACATACG 59.443 47.826 0.00 0.00 0.00 3.06
542 545 3.001634 CACACATCCATCTCAACATACGC 59.998 47.826 0.00 0.00 0.00 4.42
543 546 3.197265 CACATCCATCTCAACATACGCA 58.803 45.455 0.00 0.00 0.00 5.24
544 547 3.811497 CACATCCATCTCAACATACGCAT 59.189 43.478 0.00 0.00 0.00 4.73
545 548 4.060900 ACATCCATCTCAACATACGCATC 58.939 43.478 0.00 0.00 0.00 3.91
546 549 4.202295 ACATCCATCTCAACATACGCATCT 60.202 41.667 0.00 0.00 0.00 2.90
547 550 3.982475 TCCATCTCAACATACGCATCTC 58.018 45.455 0.00 0.00 0.00 2.75
548 551 3.062763 CCATCTCAACATACGCATCTCC 58.937 50.000 0.00 0.00 0.00 3.71
549 552 2.492019 TCTCAACATACGCATCTCCG 57.508 50.000 0.00 0.00 0.00 4.63
550 553 0.855349 CTCAACATACGCATCTCCGC 59.145 55.000 0.00 0.00 0.00 5.54
555 558 1.227263 ATACGCATCTCCGCCACAC 60.227 57.895 0.00 0.00 0.00 3.82
577 580 4.142790 CCATGGAAGCAGCTGATAGAAAT 58.857 43.478 20.43 0.00 0.00 2.17
1022 1041 8.912988 AGTTATGTTTGAGAAATTTGGTGAAGA 58.087 29.630 0.00 0.00 0.00 2.87
1099 1118 2.431771 CGCGACGACACCATCCAA 60.432 61.111 0.00 0.00 0.00 3.53
1156 1176 5.513233 AGGTTGAAGTTATTGATGATGGCT 58.487 37.500 0.00 0.00 0.00 4.75
1375 1422 3.007973 GCAGGTCCTCGGTGTCCTC 62.008 68.421 0.00 0.00 0.00 3.71
1652 1702 1.452108 GGGATGGGGCTTGAAGACG 60.452 63.158 0.00 0.00 0.00 4.18
1737 1787 1.204941 AGACAACGATGCAGAGGGTAC 59.795 52.381 0.00 0.00 0.00 3.34
2075 2137 1.979855 AGTGGTGCTGCATGTTGTTA 58.020 45.000 5.27 0.00 0.00 2.41
2278 2372 4.696479 ATCTCTCTTTCCCGCACATAAT 57.304 40.909 0.00 0.00 0.00 1.28
2472 2569 7.224753 ACAAACTATGCATGTAAGAATACTCCG 59.775 37.037 10.16 0.00 32.98 4.63
2473 2570 6.650427 ACTATGCATGTAAGAATACTCCGA 57.350 37.500 10.16 0.00 32.98 4.55
2854 2958 1.228228 GGGGGATGATTCTGCAGCA 59.772 57.895 9.47 0.00 0.00 4.41
2889 2993 1.280133 TCCAGGAGATGTTTCTGCAGG 59.720 52.381 15.13 0.41 44.99 4.85
3013 3120 0.250338 GCTTGTCCTGGAAGTCCGTT 60.250 55.000 0.00 0.00 39.43 4.44
3064 3171 0.722848 CCCACGCGTACACAATAACC 59.277 55.000 13.44 0.00 0.00 2.85
3080 3187 2.400467 AACCATCCCGCCTATACTCT 57.600 50.000 0.00 0.00 0.00 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 118 3.951037 TGTTGTTGTTGCTTCCATGTAGT 59.049 39.130 0.00 0.00 0.00 2.73
116 119 4.566545 TGTTGTTGTTGCTTCCATGTAG 57.433 40.909 0.00 0.00 0.00 2.74
117 120 4.158579 TGTTGTTGTTGTTGCTTCCATGTA 59.841 37.500 0.00 0.00 0.00 2.29
118 121 3.056250 TGTTGTTGTTGTTGCTTCCATGT 60.056 39.130 0.00 0.00 0.00 3.21
119 122 3.519579 TGTTGTTGTTGTTGCTTCCATG 58.480 40.909 0.00 0.00 0.00 3.66
120 123 3.883830 TGTTGTTGTTGTTGCTTCCAT 57.116 38.095 0.00 0.00 0.00 3.41
121 124 3.243873 TGTTGTTGTTGTTGTTGCTTCCA 60.244 39.130 0.00 0.00 0.00 3.53
122 125 3.321497 TGTTGTTGTTGTTGTTGCTTCC 58.679 40.909 0.00 0.00 0.00 3.46
123 126 4.210120 TGTTGTTGTTGTTGTTGTTGCTTC 59.790 37.500 0.00 0.00 0.00 3.86
124 127 4.122776 TGTTGTTGTTGTTGTTGTTGCTT 58.877 34.783 0.00 0.00 0.00 3.91
125 128 3.722147 TGTTGTTGTTGTTGTTGTTGCT 58.278 36.364 0.00 0.00 0.00 3.91
126 129 4.207599 GTTGTTGTTGTTGTTGTTGTTGC 58.792 39.130 0.00 0.00 0.00 4.17
127 130 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
128 131 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
129 132 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
130 133 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
131 134 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
132 135 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
133 136 3.745458 AGGCTTTGTTGTTGTTGTTGTTG 59.255 39.130 0.00 0.00 0.00 3.33
134 137 4.001618 AGGCTTTGTTGTTGTTGTTGTT 57.998 36.364 0.00 0.00 0.00 2.83
135 138 3.676291 AGGCTTTGTTGTTGTTGTTGT 57.324 38.095 0.00 0.00 0.00 3.32
136 139 5.637387 ACTAAAGGCTTTGTTGTTGTTGTTG 59.363 36.000 22.32 0.00 0.00 3.33
137 140 5.789521 ACTAAAGGCTTTGTTGTTGTTGTT 58.210 33.333 22.32 0.00 0.00 2.83
138 141 5.400066 ACTAAAGGCTTTGTTGTTGTTGT 57.600 34.783 22.32 0.00 0.00 3.32
139 142 4.803613 GGACTAAAGGCTTTGTTGTTGTTG 59.196 41.667 22.32 0.00 0.00 3.33
140 143 4.142026 GGGACTAAAGGCTTTGTTGTTGTT 60.142 41.667 22.32 0.00 0.00 2.83
141 144 3.383505 GGGACTAAAGGCTTTGTTGTTGT 59.616 43.478 22.32 10.58 0.00 3.32
142 145 3.383185 TGGGACTAAAGGCTTTGTTGTTG 59.617 43.478 22.32 7.79 0.00 3.33
143 146 3.637769 TGGGACTAAAGGCTTTGTTGTT 58.362 40.909 22.32 1.84 0.00 2.83
144 147 3.306472 TGGGACTAAAGGCTTTGTTGT 57.694 42.857 22.32 16.69 0.00 3.32
145 148 4.142049 TGTTTGGGACTAAAGGCTTTGTTG 60.142 41.667 22.32 13.85 0.00 3.33
146 149 4.027437 TGTTTGGGACTAAAGGCTTTGTT 58.973 39.130 22.32 8.73 0.00 2.83
147 150 3.637769 TGTTTGGGACTAAAGGCTTTGT 58.362 40.909 22.32 16.86 0.00 2.83
148 151 4.099419 ACTTGTTTGGGACTAAAGGCTTTG 59.901 41.667 22.32 13.97 0.00 2.77
149 152 4.286707 ACTTGTTTGGGACTAAAGGCTTT 58.713 39.130 17.76 17.76 0.00 3.51
150 153 3.910989 ACTTGTTTGGGACTAAAGGCTT 58.089 40.909 0.00 0.00 0.00 4.35
151 154 3.595190 ACTTGTTTGGGACTAAAGGCT 57.405 42.857 0.00 0.00 0.00 4.58
152 155 3.977427 CAACTTGTTTGGGACTAAAGGC 58.023 45.455 0.00 0.00 0.00 4.35
163 166 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
164 167 2.983898 TCTAGCCTACCCCAACTTGTTT 59.016 45.455 0.00 0.00 0.00 2.83
165 168 2.572104 CTCTAGCCTACCCCAACTTGTT 59.428 50.000 0.00 0.00 0.00 2.83
166 169 2.188817 CTCTAGCCTACCCCAACTTGT 58.811 52.381 0.00 0.00 0.00 3.16
167 170 1.486726 CCTCTAGCCTACCCCAACTTG 59.513 57.143 0.00 0.00 0.00 3.16
168 171 1.080666 ACCTCTAGCCTACCCCAACTT 59.919 52.381 0.00 0.00 0.00 2.66
169 172 0.717196 ACCTCTAGCCTACCCCAACT 59.283 55.000 0.00 0.00 0.00 3.16
170 173 0.831307 CACCTCTAGCCTACCCCAAC 59.169 60.000 0.00 0.00 0.00 3.77
171 174 0.714180 TCACCTCTAGCCTACCCCAA 59.286 55.000 0.00 0.00 0.00 4.12
172 175 0.714180 TTCACCTCTAGCCTACCCCA 59.286 55.000 0.00 0.00 0.00 4.96
173 176 1.485480 GTTTCACCTCTAGCCTACCCC 59.515 57.143 0.00 0.00 0.00 4.95
174 177 1.485480 GGTTTCACCTCTAGCCTACCC 59.515 57.143 0.00 0.00 34.73 3.69
175 178 1.485480 GGGTTTCACCTCTAGCCTACC 59.515 57.143 0.00 0.00 38.64 3.18
176 179 2.185387 TGGGTTTCACCTCTAGCCTAC 58.815 52.381 0.00 0.00 38.64 3.18
177 180 2.634639 TGGGTTTCACCTCTAGCCTA 57.365 50.000 0.00 0.00 38.64 3.93
178 181 1.972588 ATGGGTTTCACCTCTAGCCT 58.027 50.000 0.00 0.00 38.64 4.58
179 182 3.454812 TCTTATGGGTTTCACCTCTAGCC 59.545 47.826 0.00 0.00 38.64 3.93
180 183 4.755266 TCTTATGGGTTTCACCTCTAGC 57.245 45.455 0.00 0.00 38.64 3.42
181 184 6.515862 CGAGATCTTATGGGTTTCACCTCTAG 60.516 46.154 0.00 0.00 38.64 2.43
182 185 5.302059 CGAGATCTTATGGGTTTCACCTCTA 59.698 44.000 0.00 0.00 38.64 2.43
183 186 4.100189 CGAGATCTTATGGGTTTCACCTCT 59.900 45.833 0.00 0.00 38.64 3.69
184 187 4.372656 CGAGATCTTATGGGTTTCACCTC 58.627 47.826 0.00 0.00 38.64 3.85
185 188 3.432326 GCGAGATCTTATGGGTTTCACCT 60.432 47.826 0.00 0.00 38.64 4.00
186 189 2.872858 GCGAGATCTTATGGGTTTCACC 59.127 50.000 0.00 0.00 37.60 4.02
187 190 3.531538 TGCGAGATCTTATGGGTTTCAC 58.468 45.455 0.00 0.00 0.00 3.18
188 191 3.904800 TGCGAGATCTTATGGGTTTCA 57.095 42.857 0.00 0.00 0.00 2.69
189 192 3.312697 GGTTGCGAGATCTTATGGGTTTC 59.687 47.826 0.00 0.00 0.00 2.78
190 193 3.279434 GGTTGCGAGATCTTATGGGTTT 58.721 45.455 0.00 0.00 0.00 3.27
191 194 2.238646 TGGTTGCGAGATCTTATGGGTT 59.761 45.455 0.00 0.00 0.00 4.11
192 195 1.837439 TGGTTGCGAGATCTTATGGGT 59.163 47.619 0.00 0.00 0.00 4.51
193 196 2.614057 GTTGGTTGCGAGATCTTATGGG 59.386 50.000 0.00 0.00 0.00 4.00
194 197 3.535561 AGTTGGTTGCGAGATCTTATGG 58.464 45.455 0.00 0.00 0.00 2.74
195 198 4.183865 TGAGTTGGTTGCGAGATCTTATG 58.816 43.478 0.00 0.00 0.00 1.90
196 199 4.471904 TGAGTTGGTTGCGAGATCTTAT 57.528 40.909 0.00 0.00 0.00 1.73
197 200 3.953712 TGAGTTGGTTGCGAGATCTTA 57.046 42.857 0.00 0.00 0.00 2.10
198 201 2.839486 TGAGTTGGTTGCGAGATCTT 57.161 45.000 0.00 0.00 0.00 2.40
199 202 2.625737 CATGAGTTGGTTGCGAGATCT 58.374 47.619 0.00 0.00 0.00 2.75
200 203 1.667724 CCATGAGTTGGTTGCGAGATC 59.332 52.381 0.00 0.00 40.99 2.75
201 204 1.742761 CCATGAGTTGGTTGCGAGAT 58.257 50.000 0.00 0.00 40.99 2.75
202 205 3.231734 CCATGAGTTGGTTGCGAGA 57.768 52.632 0.00 0.00 40.99 4.04
211 214 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
212 215 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
213 216 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
214 217 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
215 218 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
216 219 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
217 220 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
218 221 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
219 222 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
220 223 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
221 224 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
222 225 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
223 226 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
224 227 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
225 228 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
226 229 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
227 230 2.357009 GTGGAAGCTTGCTATCCATGTG 59.643 50.000 19.34 0.00 44.55 3.21
228 231 2.648059 GTGGAAGCTTGCTATCCATGT 58.352 47.619 19.34 0.00 44.55 3.21
229 232 1.600957 CGTGGAAGCTTGCTATCCATG 59.399 52.381 19.34 20.51 44.55 3.66
230 233 1.959042 CGTGGAAGCTTGCTATCCAT 58.041 50.000 19.34 0.00 44.55 3.41
231 234 0.744414 GCGTGGAAGCTTGCTATCCA 60.744 55.000 19.34 9.80 40.84 3.41
232 235 0.744414 TGCGTGGAAGCTTGCTATCC 60.744 55.000 19.34 6.99 38.13 2.59
233 236 0.375106 GTGCGTGGAAGCTTGCTATC 59.625 55.000 19.34 8.59 38.13 2.08
234 237 1.026718 GGTGCGTGGAAGCTTGCTAT 61.027 55.000 19.34 0.00 38.13 2.97
235 238 1.671054 GGTGCGTGGAAGCTTGCTA 60.671 57.895 19.34 2.82 38.13 3.49
236 239 2.980233 GGTGCGTGGAAGCTTGCT 60.980 61.111 19.34 0.00 38.13 3.91
237 240 4.043200 GGGTGCGTGGAAGCTTGC 62.043 66.667 11.58 11.58 38.13 4.01
238 241 3.365265 GGGGTGCGTGGAAGCTTG 61.365 66.667 2.10 0.00 38.13 4.01
239 242 3.570212 AGGGGTGCGTGGAAGCTT 61.570 61.111 0.00 0.00 38.13 3.74
240 243 4.335647 CAGGGGTGCGTGGAAGCT 62.336 66.667 0.00 0.00 38.13 3.74
241 244 4.643387 ACAGGGGTGCGTGGAAGC 62.643 66.667 0.00 0.00 37.71 3.86
242 245 2.358737 GACAGGGGTGCGTGGAAG 60.359 66.667 0.00 0.00 0.00 3.46
243 246 3.948719 GGACAGGGGTGCGTGGAA 61.949 66.667 0.00 0.00 0.00 3.53
245 248 2.593468 CTATGGACAGGGGTGCGTGG 62.593 65.000 0.00 0.00 38.35 4.94
246 249 1.153369 CTATGGACAGGGGTGCGTG 60.153 63.158 0.00 0.00 38.35 5.34
247 250 3.031417 GCTATGGACAGGGGTGCGT 62.031 63.158 0.00 0.00 38.35 5.24
248 251 1.399744 TAGCTATGGACAGGGGTGCG 61.400 60.000 0.00 0.00 38.35 5.34
249 252 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
250 253 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
251 254 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
252 255 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
253 256 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
254 257 3.133721 ACAAAGAGCTAGCTATGGACAGG 59.866 47.826 19.38 4.81 0.00 4.00
255 258 4.367450 GACAAAGAGCTAGCTATGGACAG 58.633 47.826 19.38 6.25 0.00 3.51
256 259 3.181486 CGACAAAGAGCTAGCTATGGACA 60.181 47.826 19.38 0.00 0.00 4.02
257 260 3.066900 TCGACAAAGAGCTAGCTATGGAC 59.933 47.826 19.38 10.10 0.00 4.02
258 261 3.288092 TCGACAAAGAGCTAGCTATGGA 58.712 45.455 19.38 8.12 0.00 3.41
259 262 3.717400 TCGACAAAGAGCTAGCTATGG 57.283 47.619 19.38 13.23 0.00 2.74
260 263 6.007936 AGTATCGACAAAGAGCTAGCTATG 57.992 41.667 19.38 18.66 0.00 2.23
261 264 5.182380 GGAGTATCGACAAAGAGCTAGCTAT 59.818 44.000 19.38 12.73 34.37 2.97
262 265 4.515944 GGAGTATCGACAAAGAGCTAGCTA 59.484 45.833 19.38 0.00 34.37 3.32
263 266 3.316868 GGAGTATCGACAAAGAGCTAGCT 59.683 47.826 19.45 19.45 34.37 3.32
264 267 3.066900 TGGAGTATCGACAAAGAGCTAGC 59.933 47.826 6.62 6.62 34.37 3.42
265 268 4.902443 TGGAGTATCGACAAAGAGCTAG 57.098 45.455 0.00 0.00 34.37 3.42
266 269 5.221263 GGATTGGAGTATCGACAAAGAGCTA 60.221 44.000 0.00 0.00 34.37 3.32
267 270 4.442192 GGATTGGAGTATCGACAAAGAGCT 60.442 45.833 0.00 0.00 34.37 4.09
268 271 3.804873 GGATTGGAGTATCGACAAAGAGC 59.195 47.826 0.00 0.00 34.37 4.09
269 272 5.269505 AGGATTGGAGTATCGACAAAGAG 57.730 43.478 0.00 0.00 34.37 2.85
270 273 5.186992 TGAAGGATTGGAGTATCGACAAAGA 59.813 40.000 0.00 0.00 34.37 2.52
271 274 5.419542 TGAAGGATTGGAGTATCGACAAAG 58.580 41.667 0.00 0.00 34.37 2.77
272 275 5.414789 TGAAGGATTGGAGTATCGACAAA 57.585 39.130 0.00 0.00 34.37 2.83
273 276 4.141937 CCTGAAGGATTGGAGTATCGACAA 60.142 45.833 0.00 0.00 37.39 3.18
274 277 3.384789 CCTGAAGGATTGGAGTATCGACA 59.615 47.826 0.00 0.00 37.39 4.35
275 278 3.385111 ACCTGAAGGATTGGAGTATCGAC 59.615 47.826 2.62 0.00 38.94 4.20
276 279 3.637229 GACCTGAAGGATTGGAGTATCGA 59.363 47.826 2.62 0.00 38.94 3.59
277 280 3.639094 AGACCTGAAGGATTGGAGTATCG 59.361 47.826 2.62 0.00 38.94 2.92
278 281 4.898861 AGAGACCTGAAGGATTGGAGTATC 59.101 45.833 2.62 0.00 38.94 2.24
279 282 4.889780 AGAGACCTGAAGGATTGGAGTAT 58.110 43.478 2.62 0.00 38.94 2.12
280 283 4.017037 AGAGAGACCTGAAGGATTGGAGTA 60.017 45.833 2.62 0.00 38.94 2.59
281 284 3.103742 GAGAGACCTGAAGGATTGGAGT 58.896 50.000 2.62 0.00 38.94 3.85
282 285 3.373830 AGAGAGACCTGAAGGATTGGAG 58.626 50.000 2.62 0.00 38.94 3.86
283 286 3.481559 AGAGAGACCTGAAGGATTGGA 57.518 47.619 2.62 0.00 38.94 3.53
284 287 5.423886 GTTAAGAGAGACCTGAAGGATTGG 58.576 45.833 2.62 0.00 38.94 3.16
285 288 5.105752 CGTTAAGAGAGACCTGAAGGATTG 58.894 45.833 2.62 0.00 38.94 2.67
286 289 4.160626 CCGTTAAGAGAGACCTGAAGGATT 59.839 45.833 2.62 0.00 38.94 3.01
287 290 3.702045 CCGTTAAGAGAGACCTGAAGGAT 59.298 47.826 2.62 0.00 38.94 3.24
288 291 3.090037 CCGTTAAGAGAGACCTGAAGGA 58.910 50.000 2.62 0.00 38.94 3.36
289 292 3.090037 TCCGTTAAGAGAGACCTGAAGG 58.910 50.000 0.00 0.00 42.17 3.46
290 293 3.759618 AGTCCGTTAAGAGAGACCTGAAG 59.240 47.826 0.00 0.00 0.00 3.02
291 294 3.757493 GAGTCCGTTAAGAGAGACCTGAA 59.243 47.826 0.00 0.00 0.00 3.02
292 295 3.345414 GAGTCCGTTAAGAGAGACCTGA 58.655 50.000 0.00 0.00 0.00 3.86
293 296 2.424246 GGAGTCCGTTAAGAGAGACCTG 59.576 54.545 0.00 0.00 0.00 4.00
294 297 2.309458 AGGAGTCCGTTAAGAGAGACCT 59.691 50.000 2.76 0.00 0.00 3.85
295 298 2.684374 GAGGAGTCCGTTAAGAGAGACC 59.316 54.545 2.76 0.00 0.00 3.85
296 299 2.684374 GGAGGAGTCCGTTAAGAGAGAC 59.316 54.545 2.76 0.00 31.37 3.36
297 300 2.356947 GGGAGGAGTCCGTTAAGAGAGA 60.357 54.545 2.76 0.00 45.05 3.10
298 301 2.025898 GGGAGGAGTCCGTTAAGAGAG 58.974 57.143 2.76 0.00 45.05 3.20
299 302 1.356738 TGGGAGGAGTCCGTTAAGAGA 59.643 52.381 2.76 0.00 45.05 3.10
300 303 1.848652 TGGGAGGAGTCCGTTAAGAG 58.151 55.000 2.76 0.00 45.05 2.85
301 304 2.108168 CATGGGAGGAGTCCGTTAAGA 58.892 52.381 2.76 0.00 45.05 2.10
302 305 1.831736 ACATGGGAGGAGTCCGTTAAG 59.168 52.381 2.76 0.00 45.05 1.85
303 306 1.829222 GACATGGGAGGAGTCCGTTAA 59.171 52.381 2.76 0.00 45.05 2.01
304 307 1.272816 TGACATGGGAGGAGTCCGTTA 60.273 52.381 2.76 0.00 45.05 3.18
305 308 0.544357 TGACATGGGAGGAGTCCGTT 60.544 55.000 2.76 0.00 45.05 4.44
306 309 0.544357 TTGACATGGGAGGAGTCCGT 60.544 55.000 2.76 0.00 45.05 4.69
307 310 0.613260 TTTGACATGGGAGGAGTCCG 59.387 55.000 2.76 0.00 45.05 4.79
308 311 2.879103 TTTTGACATGGGAGGAGTCC 57.121 50.000 0.00 0.00 43.05 3.85
309 312 2.939103 CGATTTTGACATGGGAGGAGTC 59.061 50.000 0.00 0.00 0.00 3.36
310 313 2.356125 CCGATTTTGACATGGGAGGAGT 60.356 50.000 0.00 0.00 0.00 3.85
311 314 2.292267 CCGATTTTGACATGGGAGGAG 58.708 52.381 0.00 0.00 0.00 3.69
312 315 1.633432 ACCGATTTTGACATGGGAGGA 59.367 47.619 0.00 0.00 0.00 3.71
313 316 2.017049 GACCGATTTTGACATGGGAGG 58.983 52.381 0.00 0.00 0.00 4.30
314 317 1.665679 CGACCGATTTTGACATGGGAG 59.334 52.381 0.00 0.00 0.00 4.30
315 318 1.276705 TCGACCGATTTTGACATGGGA 59.723 47.619 0.00 0.00 0.00 4.37
316 319 1.396996 GTCGACCGATTTTGACATGGG 59.603 52.381 3.51 0.00 31.01 4.00
317 320 1.396996 GGTCGACCGATTTTGACATGG 59.603 52.381 20.85 0.00 32.13 3.66
318 321 1.396996 GGGTCGACCGATTTTGACATG 59.603 52.381 27.68 0.00 36.71 3.21
319 322 1.677820 GGGGTCGACCGATTTTGACAT 60.678 52.381 27.68 0.00 41.60 3.06
320 323 0.320946 GGGGTCGACCGATTTTGACA 60.321 55.000 27.68 0.00 41.60 3.58
321 324 2.463592 GGGGTCGACCGATTTTGAC 58.536 57.895 27.68 11.35 41.60 3.18
332 335 4.377760 AAGAGAGGGCGGGGTCGA 62.378 66.667 0.00 0.00 39.00 4.20
333 336 4.148825 CAAGAGAGGGCGGGGTCG 62.149 72.222 0.00 0.00 39.81 4.79
334 337 2.683933 TCAAGAGAGGGCGGGGTC 60.684 66.667 0.00 0.00 0.00 4.46
335 338 3.003763 GTCAAGAGAGGGCGGGGT 61.004 66.667 0.00 0.00 0.00 4.95
336 339 1.915078 AATGTCAAGAGAGGGCGGGG 61.915 60.000 0.00 0.00 0.00 5.73
337 340 0.462759 GAATGTCAAGAGAGGGCGGG 60.463 60.000 0.00 0.00 0.00 6.13
338 341 0.539051 AGAATGTCAAGAGAGGGCGG 59.461 55.000 0.00 0.00 0.00 6.13
339 342 1.472376 GGAGAATGTCAAGAGAGGGCG 60.472 57.143 0.00 0.00 0.00 6.13
340 343 1.472376 CGGAGAATGTCAAGAGAGGGC 60.472 57.143 0.00 0.00 0.00 5.19
341 344 1.472376 GCGGAGAATGTCAAGAGAGGG 60.472 57.143 0.00 0.00 0.00 4.30
342 345 1.205655 TGCGGAGAATGTCAAGAGAGG 59.794 52.381 0.00 0.00 0.00 3.69
343 346 2.266554 GTGCGGAGAATGTCAAGAGAG 58.733 52.381 0.00 0.00 0.00 3.20
344 347 1.402852 CGTGCGGAGAATGTCAAGAGA 60.403 52.381 0.00 0.00 0.00 3.10
345 348 0.994995 CGTGCGGAGAATGTCAAGAG 59.005 55.000 0.00 0.00 0.00 2.85
346 349 1.014044 GCGTGCGGAGAATGTCAAGA 61.014 55.000 0.00 0.00 0.00 3.02
347 350 1.016130 AGCGTGCGGAGAATGTCAAG 61.016 55.000 0.00 0.00 0.00 3.02
348 351 0.602638 AAGCGTGCGGAGAATGTCAA 60.603 50.000 0.00 0.00 0.00 3.18
349 352 0.602638 AAAGCGTGCGGAGAATGTCA 60.603 50.000 0.00 0.00 0.00 3.58
350 353 1.324736 CTAAAGCGTGCGGAGAATGTC 59.675 52.381 0.00 0.00 0.00 3.06
351 354 1.359848 CTAAAGCGTGCGGAGAATGT 58.640 50.000 0.00 0.00 0.00 2.71
352 355 0.026803 GCTAAAGCGTGCGGAGAATG 59.973 55.000 0.00 0.00 0.00 2.67
353 356 1.090052 GGCTAAAGCGTGCGGAGAAT 61.090 55.000 0.00 0.00 43.26 2.40
354 357 1.740296 GGCTAAAGCGTGCGGAGAA 60.740 57.895 0.00 0.00 43.26 2.87
355 358 2.125673 GGCTAAAGCGTGCGGAGA 60.126 61.111 0.00 0.00 43.26 3.71
356 359 3.554692 CGGCTAAAGCGTGCGGAG 61.555 66.667 0.00 0.00 43.26 4.63
357 360 4.367023 ACGGCTAAAGCGTGCGGA 62.367 61.111 0.00 0.00 43.26 5.54
358 361 3.849953 GACGGCTAAAGCGTGCGG 61.850 66.667 0.00 0.00 43.26 5.69
359 362 3.849953 GGACGGCTAAAGCGTGCG 61.850 66.667 0.00 1.74 43.26 5.34
360 363 3.849953 CGGACGGCTAAAGCGTGC 61.850 66.667 0.00 0.00 43.26 5.34
361 364 3.849953 GCGGACGGCTAAAGCGTG 61.850 66.667 0.00 0.00 43.26 5.34
370 373 3.264897 CAGTGCATAGCGGACGGC 61.265 66.667 0.00 0.00 41.69 5.68
371 374 2.586079 CCAGTGCATAGCGGACGG 60.586 66.667 0.00 0.00 41.69 4.79
372 375 1.589993 CTCCAGTGCATAGCGGACG 60.590 63.158 0.00 0.00 41.69 4.79
373 376 1.884926 GCTCCAGTGCATAGCGGAC 60.885 63.158 0.00 0.00 35.88 4.79
374 377 1.617018 AAGCTCCAGTGCATAGCGGA 61.617 55.000 0.00 0.00 41.19 5.54
375 378 1.153289 AAGCTCCAGTGCATAGCGG 60.153 57.895 0.00 0.00 41.19 5.52
376 379 0.179089 AGAAGCTCCAGTGCATAGCG 60.179 55.000 0.00 0.00 41.19 4.26
377 380 1.297664 CAGAAGCTCCAGTGCATAGC 58.702 55.000 0.00 0.00 36.48 2.97
378 381 1.483827 TCCAGAAGCTCCAGTGCATAG 59.516 52.381 0.00 0.00 34.99 2.23
379 382 1.483827 CTCCAGAAGCTCCAGTGCATA 59.516 52.381 0.00 0.00 34.99 3.14
380 383 0.252479 CTCCAGAAGCTCCAGTGCAT 59.748 55.000 0.00 0.00 34.99 3.96
381 384 1.675801 CTCCAGAAGCTCCAGTGCA 59.324 57.895 0.00 0.00 34.99 4.57
382 385 1.078567 CCTCCAGAAGCTCCAGTGC 60.079 63.158 0.00 0.00 0.00 4.40
383 386 0.248843 GACCTCCAGAAGCTCCAGTG 59.751 60.000 0.00 0.00 0.00 3.66
384 387 0.178921 TGACCTCCAGAAGCTCCAGT 60.179 55.000 0.00 0.00 0.00 4.00
385 388 0.536260 CTGACCTCCAGAAGCTCCAG 59.464 60.000 0.00 0.00 45.78 3.86
386 389 1.548357 GCTGACCTCCAGAAGCTCCA 61.548 60.000 0.00 0.00 45.78 3.86
387 390 1.220477 GCTGACCTCCAGAAGCTCC 59.780 63.158 0.00 0.00 45.78 4.70
388 391 1.153667 CGCTGACCTCCAGAAGCTC 60.154 63.158 0.00 0.00 45.78 4.09
389 392 2.977178 CGCTGACCTCCAGAAGCT 59.023 61.111 0.00 0.00 45.78 3.74
390 393 2.817396 GCGCTGACCTCCAGAAGC 60.817 66.667 0.00 0.00 45.78 3.86
391 394 1.447489 CAGCGCTGACCTCCAGAAG 60.447 63.158 33.66 0.00 45.78 2.85
392 395 1.471829 TTCAGCGCTGACCTCCAGAA 61.472 55.000 38.36 19.46 45.78 3.02
393 396 1.260538 ATTCAGCGCTGACCTCCAGA 61.261 55.000 38.36 22.92 45.78 3.86
394 397 0.461548 TATTCAGCGCTGACCTCCAG 59.538 55.000 38.36 10.43 45.67 3.86
395 398 1.123077 ATATTCAGCGCTGACCTCCA 58.877 50.000 38.36 24.45 39.66 3.86
396 399 1.506493 CATATTCAGCGCTGACCTCC 58.494 55.000 38.36 0.00 39.66 4.30
397 400 0.864455 GCATATTCAGCGCTGACCTC 59.136 55.000 38.36 21.15 39.66 3.85
398 401 0.533755 GGCATATTCAGCGCTGACCT 60.534 55.000 38.36 28.79 39.66 3.85
399 402 1.510480 GGGCATATTCAGCGCTGACC 61.510 60.000 38.36 32.10 39.66 4.02
400 403 0.815213 TGGGCATATTCAGCGCTGAC 60.815 55.000 38.36 25.62 44.29 3.51
401 404 0.107263 TTGGGCATATTCAGCGCTGA 60.107 50.000 35.30 35.30 44.29 4.26
402 405 0.740149 TTTGGGCATATTCAGCGCTG 59.260 50.000 31.53 31.53 44.29 5.18
403 406 0.740737 GTTTGGGCATATTCAGCGCT 59.259 50.000 2.64 2.64 44.29 5.92
404 407 0.249031 GGTTTGGGCATATTCAGCGC 60.249 55.000 0.00 0.00 44.24 5.92
405 408 1.102154 TGGTTTGGGCATATTCAGCG 58.898 50.000 0.00 0.00 0.00 5.18
406 409 2.961062 AGATGGTTTGGGCATATTCAGC 59.039 45.455 0.00 0.00 0.00 4.26
407 410 4.209538 TGAGATGGTTTGGGCATATTCAG 58.790 43.478 0.00 0.00 0.00 3.02
408 411 4.248174 TGAGATGGTTTGGGCATATTCA 57.752 40.909 0.00 0.00 0.00 2.57
409 412 5.351458 GTTTGAGATGGTTTGGGCATATTC 58.649 41.667 0.00 0.00 0.00 1.75
410 413 4.142182 CGTTTGAGATGGTTTGGGCATATT 60.142 41.667 0.00 0.00 0.00 1.28
411 414 3.381272 CGTTTGAGATGGTTTGGGCATAT 59.619 43.478 0.00 0.00 0.00 1.78
412 415 2.752354 CGTTTGAGATGGTTTGGGCATA 59.248 45.455 0.00 0.00 0.00 3.14
413 416 1.545582 CGTTTGAGATGGTTTGGGCAT 59.454 47.619 0.00 0.00 0.00 4.40
414 417 0.958091 CGTTTGAGATGGTTTGGGCA 59.042 50.000 0.00 0.00 0.00 5.36
415 418 1.243902 TCGTTTGAGATGGTTTGGGC 58.756 50.000 0.00 0.00 0.00 5.36
416 419 3.255642 AACATCGTTTGAGATGGTTTGGG 59.744 43.478 11.06 0.00 45.46 4.12
417 420 4.229096 CAACATCGTTTGAGATGGTTTGG 58.771 43.478 11.06 0.00 45.46 3.28
418 421 4.023279 TCCAACATCGTTTGAGATGGTTTG 60.023 41.667 11.06 7.37 45.46 2.93
419 422 4.023193 GTCCAACATCGTTTGAGATGGTTT 60.023 41.667 11.06 0.00 45.46 3.27
420 423 3.502211 GTCCAACATCGTTTGAGATGGTT 59.498 43.478 11.06 1.84 45.46 3.67
424 427 3.189287 GCTTGTCCAACATCGTTTGAGAT 59.811 43.478 0.00 0.00 0.00 2.75
425 428 2.548057 GCTTGTCCAACATCGTTTGAGA 59.452 45.455 0.00 0.00 0.00 3.27
426 429 2.549754 AGCTTGTCCAACATCGTTTGAG 59.450 45.455 0.00 0.00 0.00 3.02
427 430 2.571212 AGCTTGTCCAACATCGTTTGA 58.429 42.857 0.00 0.00 0.00 2.69
428 431 3.003689 AGAAGCTTGTCCAACATCGTTTG 59.996 43.478 2.10 0.00 0.00 2.93
429 432 3.214328 AGAAGCTTGTCCAACATCGTTT 58.786 40.909 2.10 0.00 0.00 3.60
430 433 2.808543 GAGAAGCTTGTCCAACATCGTT 59.191 45.455 12.50 0.00 0.00 3.85
431 434 2.417719 GAGAAGCTTGTCCAACATCGT 58.582 47.619 12.50 0.00 0.00 3.73
432 435 1.734465 GGAGAAGCTTGTCCAACATCG 59.266 52.381 32.06 0.00 40.18 3.84
433 436 3.006247 GAGGAGAAGCTTGTCCAACATC 58.994 50.000 36.25 24.18 42.72 3.06
434 437 2.373169 TGAGGAGAAGCTTGTCCAACAT 59.627 45.455 36.25 20.88 42.72 2.71
435 438 1.768275 TGAGGAGAAGCTTGTCCAACA 59.232 47.619 36.25 30.84 42.72 3.33
436 439 2.550830 TGAGGAGAAGCTTGTCCAAC 57.449 50.000 36.25 29.11 42.72 3.77
437 440 3.795688 ATTGAGGAGAAGCTTGTCCAA 57.204 42.857 36.25 25.72 42.72 3.53
438 441 3.415212 CAATTGAGGAGAAGCTTGTCCA 58.585 45.455 36.25 21.34 42.72 4.02
439 442 2.751806 CCAATTGAGGAGAAGCTTGTCC 59.248 50.000 30.49 30.49 40.72 4.02
440 443 3.190118 CACCAATTGAGGAGAAGCTTGTC 59.810 47.826 15.04 15.04 0.00 3.18
441 444 3.152341 CACCAATTGAGGAGAAGCTTGT 58.848 45.455 2.10 0.00 0.00 3.16
442 445 2.094854 GCACCAATTGAGGAGAAGCTTG 60.095 50.000 2.10 0.00 0.00 4.01
443 446 2.165998 GCACCAATTGAGGAGAAGCTT 58.834 47.619 7.12 0.00 0.00 3.74
444 447 1.353694 AGCACCAATTGAGGAGAAGCT 59.646 47.619 7.12 3.13 0.00 3.74
445 448 1.831580 AGCACCAATTGAGGAGAAGC 58.168 50.000 7.12 0.92 0.00 3.86
446 449 3.274288 GGTAGCACCAATTGAGGAGAAG 58.726 50.000 7.12 0.00 38.42 2.85
447 450 2.026262 GGGTAGCACCAATTGAGGAGAA 60.026 50.000 7.12 0.00 41.02 2.87
448 451 1.559682 GGGTAGCACCAATTGAGGAGA 59.440 52.381 7.12 0.00 41.02 3.71
449 452 1.408822 GGGGTAGCACCAATTGAGGAG 60.409 57.143 7.12 0.00 41.02 3.69
450 453 0.623723 GGGGTAGCACCAATTGAGGA 59.376 55.000 7.12 0.00 41.02 3.71
451 454 0.331278 TGGGGTAGCACCAATTGAGG 59.669 55.000 7.12 0.00 41.02 3.86
452 455 2.214376 TTGGGGTAGCACCAATTGAG 57.786 50.000 7.12 0.00 42.75 3.02
457 460 2.032965 TAGAGTTGGGGTAGCACCAA 57.967 50.000 9.86 9.86 45.25 3.67
458 461 2.116238 GATAGAGTTGGGGTAGCACCA 58.884 52.381 7.49 0.00 41.02 4.17
459 462 2.365941 GAGATAGAGTTGGGGTAGCACC 59.634 54.545 0.00 0.00 37.60 5.01
460 463 2.034812 CGAGATAGAGTTGGGGTAGCAC 59.965 54.545 0.00 0.00 0.00 4.40
461 464 2.307768 CGAGATAGAGTTGGGGTAGCA 58.692 52.381 0.00 0.00 0.00 3.49
462 465 2.308690 ACGAGATAGAGTTGGGGTAGC 58.691 52.381 0.00 0.00 0.00 3.58
463 466 7.110810 TGATATACGAGATAGAGTTGGGGTAG 58.889 42.308 0.00 0.00 0.00 3.18
464 467 7.024345 TGATATACGAGATAGAGTTGGGGTA 57.976 40.000 0.00 0.00 0.00 3.69
465 468 5.888901 TGATATACGAGATAGAGTTGGGGT 58.111 41.667 0.00 0.00 0.00 4.95
466 469 6.603599 TGATGATATACGAGATAGAGTTGGGG 59.396 42.308 0.00 0.00 0.00 4.96
467 470 7.631717 TGATGATATACGAGATAGAGTTGGG 57.368 40.000 0.00 0.00 0.00 4.12
468 471 9.729023 GAATGATGATATACGAGATAGAGTTGG 57.271 37.037 0.00 0.00 0.00 3.77
469 472 9.729023 GGAATGATGATATACGAGATAGAGTTG 57.271 37.037 0.00 0.00 0.00 3.16
470 473 8.616942 CGGAATGATGATATACGAGATAGAGTT 58.383 37.037 0.00 0.00 0.00 3.01
471 474 7.227711 CCGGAATGATGATATACGAGATAGAGT 59.772 40.741 0.00 0.00 0.00 3.24
472 475 7.442666 TCCGGAATGATGATATACGAGATAGAG 59.557 40.741 0.00 0.00 0.00 2.43
473 476 7.226918 GTCCGGAATGATGATATACGAGATAGA 59.773 40.741 5.23 0.00 0.00 1.98
474 477 7.227711 AGTCCGGAATGATGATATACGAGATAG 59.772 40.741 5.23 0.00 0.00 2.08
475 478 7.054751 AGTCCGGAATGATGATATACGAGATA 58.945 38.462 5.23 0.00 0.00 1.98
476 479 5.888724 AGTCCGGAATGATGATATACGAGAT 59.111 40.000 5.23 0.00 0.00 2.75
477 480 5.254115 AGTCCGGAATGATGATATACGAGA 58.746 41.667 5.23 0.00 0.00 4.04
478 481 5.568685 AGTCCGGAATGATGATATACGAG 57.431 43.478 5.23 0.00 0.00 4.18
479 482 4.094442 CGAGTCCGGAATGATGATATACGA 59.906 45.833 10.26 0.00 0.00 3.43
480 483 4.094442 TCGAGTCCGGAATGATGATATACG 59.906 45.833 10.26 2.94 36.24 3.06
481 484 5.562506 TCGAGTCCGGAATGATGATATAC 57.437 43.478 10.26 0.00 36.24 1.47
482 485 5.299531 GGATCGAGTCCGGAATGATGATATA 59.700 44.000 10.26 0.00 37.23 0.86
483 486 4.098654 GGATCGAGTCCGGAATGATGATAT 59.901 45.833 10.26 0.00 37.23 1.63
484 487 3.444034 GGATCGAGTCCGGAATGATGATA 59.556 47.826 10.26 0.00 37.23 2.15
485 488 2.232452 GGATCGAGTCCGGAATGATGAT 59.768 50.000 10.26 9.95 37.23 2.45
486 489 1.613925 GGATCGAGTCCGGAATGATGA 59.386 52.381 10.26 4.67 37.23 2.92
487 490 2.071688 GGATCGAGTCCGGAATGATG 57.928 55.000 10.26 0.00 37.23 3.07
497 500 1.096416 ACACGAGGAAGGATCGAGTC 58.904 55.000 1.94 0.00 39.27 3.36
498 501 0.811915 CACACGAGGAAGGATCGAGT 59.188 55.000 1.94 0.00 43.22 4.18
499 502 0.101399 CCACACGAGGAAGGATCGAG 59.899 60.000 1.94 0.00 42.76 4.04
500 503 1.945354 GCCACACGAGGAAGGATCGA 61.945 60.000 1.94 0.00 42.76 3.59
501 504 1.519455 GCCACACGAGGAAGGATCG 60.519 63.158 0.00 0.00 45.54 3.69
502 505 1.153349 GGCCACACGAGGAAGGATC 60.153 63.158 0.00 0.00 0.00 3.36
503 506 1.918293 TGGCCACACGAGGAAGGAT 60.918 57.895 0.00 0.00 0.00 3.24
504 507 2.525629 TGGCCACACGAGGAAGGA 60.526 61.111 0.00 0.00 0.00 3.36
505 508 2.358737 GTGGCCACACGAGGAAGG 60.359 66.667 31.23 0.00 37.94 3.46
515 518 0.035152 TGAGATGGATGTGTGGCCAC 60.035 55.000 29.67 29.67 42.19 5.01
516 519 0.697658 TTGAGATGGATGTGTGGCCA 59.302 50.000 0.00 0.00 38.78 5.36
517 520 1.098050 GTTGAGATGGATGTGTGGCC 58.902 55.000 0.00 0.00 0.00 5.36
518 521 1.825090 TGTTGAGATGGATGTGTGGC 58.175 50.000 0.00 0.00 0.00 5.01
519 522 3.557185 CGTATGTTGAGATGGATGTGTGG 59.443 47.826 0.00 0.00 0.00 4.17
520 523 3.001634 GCGTATGTTGAGATGGATGTGTG 59.998 47.826 0.00 0.00 0.00 3.82
521 524 3.198068 GCGTATGTTGAGATGGATGTGT 58.802 45.455 0.00 0.00 0.00 3.72
522 525 3.197265 TGCGTATGTTGAGATGGATGTG 58.803 45.455 0.00 0.00 0.00 3.21
523 526 3.541996 TGCGTATGTTGAGATGGATGT 57.458 42.857 0.00 0.00 0.00 3.06
524 527 4.313282 AGATGCGTATGTTGAGATGGATG 58.687 43.478 0.00 0.00 0.00 3.51
525 528 4.562347 GGAGATGCGTATGTTGAGATGGAT 60.562 45.833 0.00 0.00 0.00 3.41
526 529 3.243873 GGAGATGCGTATGTTGAGATGGA 60.244 47.826 0.00 0.00 0.00 3.41
527 530 3.062763 GGAGATGCGTATGTTGAGATGG 58.937 50.000 0.00 0.00 0.00 3.51
528 531 2.728318 CGGAGATGCGTATGTTGAGATG 59.272 50.000 0.00 0.00 0.00 2.90
529 532 2.864097 GCGGAGATGCGTATGTTGAGAT 60.864 50.000 0.00 0.00 0.00 2.75
530 533 1.536072 GCGGAGATGCGTATGTTGAGA 60.536 52.381 0.00 0.00 0.00 3.27
531 534 0.855349 GCGGAGATGCGTATGTTGAG 59.145 55.000 0.00 0.00 0.00 3.02
532 535 0.529773 GGCGGAGATGCGTATGTTGA 60.530 55.000 0.00 0.00 35.06 3.18
533 536 0.809636 TGGCGGAGATGCGTATGTTG 60.810 55.000 0.00 0.00 35.06 3.33
534 537 0.810031 GTGGCGGAGATGCGTATGTT 60.810 55.000 0.00 0.00 35.06 2.71
535 538 1.227263 GTGGCGGAGATGCGTATGT 60.227 57.895 0.00 0.00 35.06 2.29
536 539 1.227234 TGTGGCGGAGATGCGTATG 60.227 57.895 0.00 0.00 35.06 2.39
537 540 1.227263 GTGTGGCGGAGATGCGTAT 60.227 57.895 0.00 0.00 35.06 3.06
538 541 2.183300 GTGTGGCGGAGATGCGTA 59.817 61.111 0.00 0.00 35.06 4.42
539 542 4.760047 GGTGTGGCGGAGATGCGT 62.760 66.667 0.00 0.00 35.06 5.24
540 543 4.758251 TGGTGTGGCGGAGATGCG 62.758 66.667 0.00 0.00 35.06 4.73
541 544 2.124570 ATGGTGTGGCGGAGATGC 60.125 61.111 0.00 0.00 0.00 3.91
542 545 1.820906 CCATGGTGTGGCGGAGATG 60.821 63.158 2.57 0.00 42.12 2.90
543 546 2.591753 CCATGGTGTGGCGGAGAT 59.408 61.111 2.57 0.00 42.12 2.75
555 558 2.924757 TCTATCAGCTGCTTCCATGG 57.075 50.000 9.47 4.97 0.00 3.66
650 653 5.549742 TTTTTGCACAGAATCTTCCCATT 57.450 34.783 0.00 0.00 0.00 3.16
652 655 4.588106 TCATTTTTGCACAGAATCTTCCCA 59.412 37.500 0.00 0.00 0.00 4.37
653 656 4.925646 GTCATTTTTGCACAGAATCTTCCC 59.074 41.667 0.00 0.00 0.00 3.97
658 661 3.676646 GCTGGTCATTTTTGCACAGAATC 59.323 43.478 1.24 0.00 0.00 2.52
998 1017 9.528018 GTTCTTCACCAAATTTCTCAAACATAA 57.472 29.630 0.00 0.00 0.00 1.90
1022 1041 5.940617 TGTATTGCCCTGCTTCATATAGTT 58.059 37.500 0.00 0.00 0.00 2.24
1099 1118 4.039488 TCTGCACCATTTTTCATGCTTCTT 59.961 37.500 0.00 0.00 38.90 2.52
1156 1176 6.148811 TCGCACACTATCGATACTATTGATGA 59.851 38.462 0.00 0.00 35.13 2.92
1161 1181 5.238868 ACACTCGCACACTATCGATACTATT 59.761 40.000 0.00 0.00 33.98 1.73
1368 1415 1.757118 TCTGATCCATTCCGAGGACAC 59.243 52.381 0.00 0.00 38.13 3.67
1375 1422 2.037641 TGCTGGTATCTGATCCATTCCG 59.962 50.000 8.58 1.32 33.01 4.30
1652 1702 7.013750 GTCTTTCCCCTTATCTGAATGAATTCC 59.986 40.741 2.27 0.00 35.97 3.01
1729 1779 0.834687 TTCCAACCGCAGTACCCTCT 60.835 55.000 0.00 0.00 0.00 3.69
1737 1787 2.518949 CGATGAAATTTCCAACCGCAG 58.481 47.619 15.48 0.00 0.00 5.18
1861 1919 0.306533 GAGCTTTTCCGTTCGTTGCA 59.693 50.000 0.00 0.00 0.00 4.08
2075 2137 2.699846 TCTGCTCCAAGGTTGCATTTTT 59.300 40.909 9.17 0.00 36.07 1.94
2278 2372 7.397892 TTTTTAAGACATGAAAGTGGTCACA 57.602 32.000 0.00 0.00 34.04 3.58
2472 2569 2.042831 GCTGTGGCCACATGGACTC 61.043 63.158 37.66 18.30 45.91 3.36
2473 2570 2.034687 GCTGTGGCCACATGGACT 59.965 61.111 37.66 0.00 45.91 3.85
2539 2636 1.768684 TTGAACTGGCCGAGCTTCCT 61.769 55.000 0.00 0.00 0.00 3.36
2622 2720 2.079925 GAACAGAAGGTGTGAGGCATC 58.920 52.381 0.00 0.00 40.26 3.91
2839 2943 1.404391 CACCTTGCTGCAGAATCATCC 59.596 52.381 20.43 0.00 0.00 3.51
2854 2958 3.184628 TCCTGGACTGATGAATCACCTT 58.815 45.455 0.00 0.00 32.50 3.50
2889 2993 2.675371 GGCCCACCTAACACCTCC 59.325 66.667 0.00 0.00 0.00 4.30
2995 3102 1.070134 TGAACGGACTTCCAGGACAAG 59.930 52.381 0.00 0.00 35.14 3.16
3013 3120 4.648651 TGACGATCGTTAGGATAGGATGA 58.351 43.478 23.63 0.00 34.82 2.92
3064 3171 3.322254 AGTCAAAGAGTATAGGCGGGATG 59.678 47.826 0.00 0.00 0.00 3.51
3080 3187 1.267806 GGACTGGTCGTCGTAGTCAAA 59.732 52.381 20.16 0.00 43.79 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.