Multiple sequence alignment - TraesCS2B01G157600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G157600 chr2B 100.000 7125 0 0 1 7125 131567757 131574881 0.000000e+00 13158.0
1 TraesCS2B01G157600 chr2B 94.737 57 2 1 2803 2858 467552645 467552701 3.540000e-13 87.9
2 TraesCS2B01G157600 chr2A 97.140 4266 103 8 2878 7125 80589431 80593695 0.000000e+00 7184.0
3 TraesCS2B01G157600 chr2A 92.997 1942 81 26 888 2804 80587418 80589329 0.000000e+00 2782.0
4 TraesCS2B01G157600 chr2A 84.605 708 46 25 158 845 80586741 80587405 0.000000e+00 645.0
5 TraesCS2B01G157600 chr2A 92.126 127 8 1 1 127 80586616 80586740 2.040000e-40 178.0
6 TraesCS2B01G157600 chr2D 96.562 4276 121 11 2865 7125 79983881 79988145 0.000000e+00 7059.0
7 TraesCS2B01G157600 chr2D 91.149 2689 105 57 1 2630 79981056 79983670 0.000000e+00 3524.0
8 TraesCS2B01G157600 chr4B 96.280 457 17 0 2104 2560 653276406 653276862 0.000000e+00 750.0
9 TraesCS2B01G157600 chr4B 99.367 158 1 0 1518 1675 653276255 653276412 3.250000e-73 287.0
10 TraesCS2B01G157600 chr5A 98.077 52 1 0 2807 2858 312227297 312227348 2.740000e-14 91.6
11 TraesCS2B01G157600 chr3A 96.429 56 1 1 2803 2858 80689110 80689164 2.740000e-14 91.6
12 TraesCS2B01G157600 chr3A 98.077 52 1 0 2807 2858 596922628 596922577 2.740000e-14 91.6
13 TraesCS2B01G157600 chr3A 93.443 61 3 1 2799 2858 108462753 108462813 9.840000e-14 89.8
14 TraesCS2B01G157600 chr7D 98.039 51 1 0 2808 2858 611587309 611587259 9.840000e-14 89.8
15 TraesCS2B01G157600 chr4D 96.296 54 2 0 2805 2858 421896524 421896471 9.840000e-14 89.8
16 TraesCS2B01G157600 chr1A 91.803 61 5 0 2798 2858 550884834 550884894 1.270000e-12 86.1
17 TraesCS2B01G157600 chr1A 89.706 68 3 4 2791 2858 515551491 515551428 4.580000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G157600 chr2B 131567757 131574881 7124 False 13158.00 13158 100.0000 1 7125 1 chr2B.!!$F1 7124
1 TraesCS2B01G157600 chr2A 80586616 80593695 7079 False 2697.25 7184 91.7170 1 7125 4 chr2A.!!$F1 7124
2 TraesCS2B01G157600 chr2D 79981056 79988145 7089 False 5291.50 7059 93.8555 1 7125 2 chr2D.!!$F1 7124
3 TraesCS2B01G157600 chr4B 653276255 653276862 607 False 518.50 750 97.8235 1518 2560 2 chr4B.!!$F1 1042

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
345 393 0.027455 ACAAACATCACACACGCACG 59.973 50.0 0.00 0.0 0.00 5.34 F
400 448 0.247185 AAAATGCACGGCCCAAGATG 59.753 50.0 0.00 0.0 0.00 2.90 F
864 930 0.460987 CAAGGATCGAGAGCCACCAC 60.461 60.0 10.21 0.0 39.89 4.16 F
1239 1306 0.877071 TCAAGGTGGTCTACGTCGTC 59.123 55.0 0.00 0.0 0.00 4.20 F
2818 2917 0.033109 ACCATAGAAAAGGGGGCAGC 60.033 55.0 0.00 0.0 0.00 5.25 F
3389 3532 0.176680 AGAAGCTAGCCATCACCGTG 59.823 55.0 12.13 0.0 0.00 4.94 F
3422 3565 0.251297 CAGACAAGGGCAATGTGGGA 60.251 55.0 0.00 0.0 0.00 4.37 F
4064 4207 0.322277 CACCACCAGCTGAGAATGCT 60.322 55.0 17.39 0.0 42.06 3.79 F
5566 5709 0.179059 TGCTGGAGAAACGCAAGACA 60.179 50.0 0.00 0.0 43.62 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1974 2041 0.321919 TGACAATGTGGCTCCTCTGC 60.322 55.000 0.00 0.0 0.00 4.26 R
2103 2170 0.974010 TGATGGGGTCGACCAGGTAC 60.974 60.000 34.40 20.6 45.20 3.34 R
2588 2665 0.531532 CCAGGTGGATCGATGTGAGC 60.532 60.000 0.54 0.0 37.39 4.26 R
2962 3090 1.138266 AGGCTTACGGCGTTGATATGT 59.862 47.619 21.24 0.0 42.94 2.29 R
4460 4603 1.091771 CCAGTATGCCCTTGTCGCTG 61.092 60.000 0.00 0.0 31.97 5.18 R
5178 5321 0.174162 AAATCAAATGCAGAGGCGGC 59.826 50.000 0.00 0.0 45.35 6.53 R
5521 5664 1.556373 CCCCTGGAGCATCACTGTCA 61.556 60.000 0.00 0.0 36.25 3.58 R
5875 6018 1.131126 GATGTTGCACTCCATCCAACG 59.869 52.381 8.37 0.0 41.17 4.10 R
6990 7138 4.261363 GCCAATTACAGAAGAAGCATAGGC 60.261 45.833 0.00 0.0 41.61 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.795329 TCAAATTCTTGGCAGAGACCC 58.205 47.619 0.00 0.00 33.01 4.46
44 45 1.470098 CAAATTCTTGGCAGAGACCCG 59.530 52.381 0.00 0.00 0.00 5.28
50 51 0.250234 TTGGCAGAGACCCGAGAATG 59.750 55.000 0.00 0.00 0.00 2.67
138 139 1.597027 CACGAGACCCGCCAAAACT 60.597 57.895 0.00 0.00 43.32 2.66
151 152 1.413118 CAAAACTGAAACCCCTGGCT 58.587 50.000 0.00 0.00 0.00 4.75
191 209 2.127232 GGCAACCATCCCATTCCCG 61.127 63.158 0.00 0.00 0.00 5.14
202 220 3.134127 ATTCCCGCGGCAGAAAGC 61.134 61.111 22.85 0.00 44.65 3.51
246 265 2.102357 CTCACGGACGGACCATCG 59.898 66.667 0.00 0.00 38.90 3.84
273 320 4.619320 CACAGCCCCCAAAGCCCA 62.619 66.667 0.00 0.00 0.00 5.36
274 321 4.305956 ACAGCCCCCAAAGCCCAG 62.306 66.667 0.00 0.00 0.00 4.45
341 389 0.310543 CCCCACAAACATCACACACG 59.689 55.000 0.00 0.00 0.00 4.49
343 391 0.380024 CCACAAACATCACACACGCA 59.620 50.000 0.00 0.00 0.00 5.24
344 392 1.465837 CACAAACATCACACACGCAC 58.534 50.000 0.00 0.00 0.00 5.34
345 393 0.027455 ACAAACATCACACACGCACG 59.973 50.000 0.00 0.00 0.00 5.34
346 394 0.657077 CAAACATCACACACGCACGG 60.657 55.000 0.00 0.00 0.00 4.94
365 413 2.340328 GGACGGGCATCACCAAACC 61.340 63.158 0.00 0.00 42.05 3.27
366 414 1.303317 GACGGGCATCACCAAACCT 60.303 57.895 0.00 0.00 42.05 3.50
369 417 1.076549 GGGCATCACCAAACCTGGA 59.923 57.895 0.00 0.00 46.92 3.86
400 448 0.247185 AAAATGCACGGCCCAAGATG 59.753 50.000 0.00 0.00 0.00 2.90
401 449 0.899717 AAATGCACGGCCCAAGATGT 60.900 50.000 0.00 0.00 0.00 3.06
634 690 2.032071 CGCTTTTCTCACCCCCGT 59.968 61.111 0.00 0.00 0.00 5.28
724 781 4.388499 CTTGCCCGCCACCGTACT 62.388 66.667 0.00 0.00 0.00 2.73
726 783 4.690719 TGCCCGCCACCGTACTTG 62.691 66.667 0.00 0.00 0.00 3.16
732 789 4.218722 CCACCGTACTTGGCATCC 57.781 61.111 0.00 0.00 0.00 3.51
733 790 1.602237 CCACCGTACTTGGCATCCT 59.398 57.895 0.00 0.00 0.00 3.24
734 791 0.462047 CCACCGTACTTGGCATCCTC 60.462 60.000 0.00 0.00 0.00 3.71
735 792 0.462047 CACCGTACTTGGCATCCTCC 60.462 60.000 0.00 0.00 0.00 4.30
736 793 1.146263 CCGTACTTGGCATCCTCCC 59.854 63.158 0.00 0.00 0.00 4.30
737 794 1.146263 CGTACTTGGCATCCTCCCC 59.854 63.158 0.00 0.00 0.00 4.81
738 795 1.338136 CGTACTTGGCATCCTCCCCT 61.338 60.000 0.00 0.00 0.00 4.79
849 915 3.439476 CAGAATCCAAGAACAGAGCAAGG 59.561 47.826 0.00 0.00 0.00 3.61
851 917 4.018597 AGAATCCAAGAACAGAGCAAGGAT 60.019 41.667 0.00 0.00 36.02 3.24
863 929 1.900351 CAAGGATCGAGAGCCACCA 59.100 57.895 10.21 0.00 39.89 4.17
864 930 0.460987 CAAGGATCGAGAGCCACCAC 60.461 60.000 10.21 0.00 39.89 4.16
866 932 2.501610 GATCGAGAGCCACCACCC 59.498 66.667 0.00 0.00 0.00 4.61
867 933 2.039624 ATCGAGAGCCACCACCCT 59.960 61.111 0.00 0.00 0.00 4.34
868 934 2.022240 GATCGAGAGCCACCACCCTC 62.022 65.000 0.00 0.00 0.00 4.30
869 935 2.805313 ATCGAGAGCCACCACCCTCA 62.805 60.000 0.00 0.00 0.00 3.86
870 936 2.985456 GAGAGCCACCACCCTCAG 59.015 66.667 0.00 0.00 0.00 3.35
909 975 1.031571 TGGATTGCCGCTCCATTGTC 61.032 55.000 0.00 0.00 37.87 3.18
913 979 1.851021 TTGCCGCTCCATTGTCGTTG 61.851 55.000 0.00 0.00 0.00 4.10
914 980 2.325082 GCCGCTCCATTGTCGTTGT 61.325 57.895 0.00 0.00 0.00 3.32
915 981 1.852067 GCCGCTCCATTGTCGTTGTT 61.852 55.000 0.00 0.00 0.00 2.83
916 982 1.434555 CCGCTCCATTGTCGTTGTTA 58.565 50.000 0.00 0.00 0.00 2.41
920 986 4.283678 CGCTCCATTGTCGTTGTTAAAAA 58.716 39.130 0.00 0.00 0.00 1.94
1091 1158 2.811317 GCACTCGTTCCTGCTCGG 60.811 66.667 0.00 0.00 0.00 4.63
1239 1306 0.877071 TCAAGGTGGTCTACGTCGTC 59.123 55.000 0.00 0.00 0.00 4.20
1263 1330 2.184579 GCGCAGTACCAGTCCTCC 59.815 66.667 0.30 0.00 0.00 4.30
1269 1336 0.959372 AGTACCAGTCCTCCGTCACG 60.959 60.000 0.00 0.00 0.00 4.35
1350 1417 3.805307 CTCGTCGAGGAGCTGCGT 61.805 66.667 21.00 0.00 0.00 5.24
1539 1606 4.681421 CTCAACAAGCTCGGCTCA 57.319 55.556 0.00 0.00 38.25 4.26
1877 1944 4.830765 GCTCGCGCCCACCATGTA 62.831 66.667 0.00 0.00 0.00 2.29
1953 2020 2.269241 CTCAAGAACCCCGAGGCC 59.731 66.667 0.00 0.00 36.11 5.19
1974 2041 1.300465 CATCATCGGCCTCGTCCTG 60.300 63.158 0.00 0.00 37.69 3.86
2109 2176 2.417516 CCCATCGAGCGGTACCTG 59.582 66.667 10.90 4.84 0.00 4.00
2405 2472 1.318158 CCAAGATCAGGCAAGCCACC 61.318 60.000 14.40 0.00 38.92 4.61
2476 2553 2.205022 TTGAGCTGAACTGGGAATGG 57.795 50.000 0.00 0.00 0.00 3.16
2588 2665 6.173339 TCAAGAGGAAAACTAAGGTATGCAG 58.827 40.000 0.00 0.00 0.00 4.41
2604 2681 1.156645 GCAGCTCACATCGATCCACC 61.157 60.000 0.00 0.00 0.00 4.61
2611 2688 1.066215 CACATCGATCCACCTGGTTGA 60.066 52.381 2.77 2.77 36.34 3.18
2620 2697 5.997746 CGATCCACCTGGTTGATGTATATTT 59.002 40.000 17.29 0.00 36.34 1.40
2622 2699 4.887071 TCCACCTGGTTGATGTATATTTGC 59.113 41.667 0.00 0.00 36.34 3.68
2623 2700 4.889409 CCACCTGGTTGATGTATATTTGCT 59.111 41.667 0.00 0.00 0.00 3.91
2624 2701 6.061441 CCACCTGGTTGATGTATATTTGCTA 58.939 40.000 0.00 0.00 0.00 3.49
2625 2702 6.205464 CCACCTGGTTGATGTATATTTGCTAG 59.795 42.308 0.00 0.00 0.00 3.42
2626 2703 6.767902 CACCTGGTTGATGTATATTTGCTAGT 59.232 38.462 0.00 0.00 0.00 2.57
2627 2704 7.931407 CACCTGGTTGATGTATATTTGCTAGTA 59.069 37.037 0.00 0.00 0.00 1.82
2632 2709 9.502091 GGTTGATGTATATTTGCTAGTATCCAA 57.498 33.333 0.00 0.00 0.00 3.53
2643 2720 5.009631 TGCTAGTATCCAAATTGCACTGTT 58.990 37.500 0.00 0.00 0.00 3.16
2644 2721 5.476599 TGCTAGTATCCAAATTGCACTGTTT 59.523 36.000 0.00 0.00 0.00 2.83
2646 2723 7.175816 TGCTAGTATCCAAATTGCACTGTTTAA 59.824 33.333 0.00 0.00 0.00 1.52
2652 2729 6.810911 TCCAAATTGCACTGTTTAAGCTAAA 58.189 32.000 0.00 0.00 0.00 1.85
2682 2766 6.658188 AAGCTAGCCTATAAGTAGTTCTGG 57.342 41.667 12.13 0.00 0.00 3.86
2685 2769 3.297736 AGCCTATAAGTAGTTCTGGCGT 58.702 45.455 12.48 3.21 43.15 5.68
2698 2782 2.735151 TCTGGCGTCCATCTCTTCTTA 58.265 47.619 0.00 0.00 30.82 2.10
2699 2783 3.096852 TCTGGCGTCCATCTCTTCTTAA 58.903 45.455 0.00 0.00 30.82 1.85
2700 2784 3.706594 TCTGGCGTCCATCTCTTCTTAAT 59.293 43.478 0.00 0.00 30.82 1.40
2701 2785 4.893524 TCTGGCGTCCATCTCTTCTTAATA 59.106 41.667 0.00 0.00 30.82 0.98
2739 2823 8.978564 ATGAACTTATCGACATATTAGCTCAG 57.021 34.615 0.00 0.00 0.00 3.35
2742 2826 7.689446 ACTTATCGACATATTAGCTCAGCTA 57.311 36.000 0.83 0.83 40.44 3.32
2743 2827 7.757526 ACTTATCGACATATTAGCTCAGCTAG 58.242 38.462 6.46 0.00 42.34 3.42
2744 2828 7.392113 ACTTATCGACATATTAGCTCAGCTAGT 59.608 37.037 6.46 6.72 42.34 2.57
2745 2829 6.582677 ATCGACATATTAGCTCAGCTAGTT 57.417 37.500 7.06 1.84 42.34 2.24
2746 2830 6.003234 TCGACATATTAGCTCAGCTAGTTC 57.997 41.667 7.06 0.00 42.34 3.01
2747 2831 5.531287 TCGACATATTAGCTCAGCTAGTTCA 59.469 40.000 7.06 0.00 42.34 3.18
2748 2832 6.207614 TCGACATATTAGCTCAGCTAGTTCAT 59.792 38.462 7.06 0.33 42.34 2.57
2749 2833 6.865726 CGACATATTAGCTCAGCTAGTTCATT 59.134 38.462 7.06 0.00 42.34 2.57
2750 2834 7.148836 CGACATATTAGCTCAGCTAGTTCATTG 60.149 40.741 7.06 3.83 42.34 2.82
2754 2853 3.415212 AGCTCAGCTAGTTCATTGCAAA 58.585 40.909 1.71 0.00 36.99 3.68
2771 2870 3.761218 TGCAAACTGAAAACTGGAACTGA 59.239 39.130 0.00 0.00 0.00 3.41
2804 2903 4.148079 TGTGCATCAAACCTTCAACCATA 58.852 39.130 0.00 0.00 0.00 2.74
2805 2904 4.218200 TGTGCATCAAACCTTCAACCATAG 59.782 41.667 0.00 0.00 0.00 2.23
2806 2905 4.458989 GTGCATCAAACCTTCAACCATAGA 59.541 41.667 0.00 0.00 0.00 1.98
2807 2906 5.048083 GTGCATCAAACCTTCAACCATAGAA 60.048 40.000 0.00 0.00 0.00 2.10
2811 2910 6.648879 TCAAACCTTCAACCATAGAAAAGG 57.351 37.500 0.00 0.00 41.81 3.11
2812 2911 5.538433 TCAAACCTTCAACCATAGAAAAGGG 59.462 40.000 4.63 0.00 40.66 3.95
2813 2912 4.047627 ACCTTCAACCATAGAAAAGGGG 57.952 45.455 4.63 0.00 40.66 4.79
2814 2913 3.245622 ACCTTCAACCATAGAAAAGGGGG 60.246 47.826 4.63 0.00 40.66 5.40
2815 2914 2.525105 TCAACCATAGAAAAGGGGGC 57.475 50.000 0.00 0.00 0.00 5.80
2817 2916 2.102578 CAACCATAGAAAAGGGGGCAG 58.897 52.381 0.00 0.00 0.00 4.85
2818 2917 0.033109 ACCATAGAAAAGGGGGCAGC 60.033 55.000 0.00 0.00 0.00 5.25
2819 2918 0.756815 CCATAGAAAAGGGGGCAGCC 60.757 60.000 1.26 1.26 0.00 4.85
2820 2919 0.756815 CATAGAAAAGGGGGCAGCCC 60.757 60.000 24.23 24.23 44.51 5.19
2821 2920 2.284515 ATAGAAAAGGGGGCAGCCCG 62.285 60.000 25.18 0.00 46.66 6.13
2831 2930 3.204827 GCAGCCCGGTGCATGTAG 61.205 66.667 13.70 0.91 43.41 2.74
2832 2931 3.204827 CAGCCCGGTGCATGTAGC 61.205 66.667 15.92 2.56 44.83 3.58
2833 2932 3.402681 AGCCCGGTGCATGTAGCT 61.403 61.111 15.92 4.82 45.94 3.32
2834 2933 2.897350 GCCCGGTGCATGTAGCTC 60.897 66.667 11.25 0.00 45.94 4.09
2842 2941 0.179084 TGCATGTAGCTCCCGCTTAC 60.179 55.000 0.00 0.00 46.47 2.34
2844 2943 1.067582 ATGTAGCTCCCGCTTACGC 59.932 57.895 0.00 0.00 46.47 4.42
2846 2945 1.589196 GTAGCTCCCGCTTACGCAG 60.589 63.158 0.00 0.00 46.47 5.18
2847 2946 2.782222 TAGCTCCCGCTTACGCAGG 61.782 63.158 0.00 0.00 46.47 4.85
2850 2949 3.718210 CTCCCGCTTACGCAGGGTC 62.718 68.421 16.64 0.00 44.78 4.46
2851 2950 4.832608 CCCGCTTACGCAGGGTCC 62.833 72.222 11.33 0.00 41.79 4.46
2874 2981 4.083484 CGGGGAACAGACAAACTAATCAAC 60.083 45.833 0.00 0.00 0.00 3.18
2875 2982 4.217767 GGGGAACAGACAAACTAATCAACC 59.782 45.833 0.00 0.00 0.00 3.77
2876 2983 4.825085 GGGAACAGACAAACTAATCAACCA 59.175 41.667 0.00 0.00 0.00 3.67
2877 2984 5.476945 GGGAACAGACAAACTAATCAACCAT 59.523 40.000 0.00 0.00 0.00 3.55
2878 2985 6.381801 GGAACAGACAAACTAATCAACCATG 58.618 40.000 0.00 0.00 0.00 3.66
2880 2987 6.560253 ACAGACAAACTAATCAACCATGTC 57.440 37.500 0.00 0.00 36.77 3.06
2881 2988 6.061441 ACAGACAAACTAATCAACCATGTCA 58.939 36.000 0.00 0.00 38.46 3.58
2882 2989 6.716628 ACAGACAAACTAATCAACCATGTCAT 59.283 34.615 0.00 0.00 38.46 3.06
2883 2990 7.025365 CAGACAAACTAATCAACCATGTCATG 58.975 38.462 5.79 5.79 38.46 3.07
2896 3024 5.613329 ACCATGTCATGCAAAAACTGAAAT 58.387 33.333 7.35 0.00 0.00 2.17
2914 3042 5.478407 TGAAATTACTCGCTCAGTTGATCA 58.522 37.500 0.00 0.00 36.43 2.92
2921 3049 4.327357 ACTCGCTCAGTTGATCAATTAACG 59.673 41.667 12.12 12.04 32.24 3.18
2925 3053 5.393962 GCTCAGTTGATCAATTAACGCTTT 58.606 37.500 12.12 0.00 32.24 3.51
2962 3090 3.692101 CACCCACTGAACAGTTTGTTGTA 59.308 43.478 4.63 0.00 41.28 2.41
2963 3091 3.692593 ACCCACTGAACAGTTTGTTGTAC 59.307 43.478 4.63 0.00 41.28 2.90
3015 3143 9.416794 CTGCTATGAGAACGAGATGTTAAATAT 57.583 33.333 0.00 0.00 42.09 1.28
3040 3169 2.827322 TGAAAAGTCCAATGCATCCTGG 59.173 45.455 10.70 10.70 0.00 4.45
3059 3188 5.360999 TCCTGGTAATGCCTATCTATCATCG 59.639 44.000 0.00 0.00 38.35 3.84
3061 3190 4.466015 TGGTAATGCCTATCTATCATCGCA 59.534 41.667 0.00 0.00 38.35 5.10
3072 3201 4.540824 TCTATCATCGCATCGAAGTTCAG 58.459 43.478 3.32 0.00 39.99 3.02
3119 3248 7.379098 AGGTTAAGCTAACAAATGCTAACTC 57.621 36.000 5.12 0.00 40.39 3.01
3142 3271 7.943447 ACTCACTGAACTTCTACTTACTCCTTA 59.057 37.037 0.00 0.00 0.00 2.69
3230 3359 8.999431 TCAGTTATGTGATTTACTTTCCACTTC 58.001 33.333 0.00 0.00 0.00 3.01
3282 3411 2.092914 GGGTACTCAAACTCCTCATGGG 60.093 54.545 0.00 0.00 0.00 4.00
3289 3418 4.739793 TCAAACTCCTCATGGGTGAAAAT 58.260 39.130 8.66 0.00 33.05 1.82
3322 3451 2.683968 TCTCGGTTCTTGTATGCACAC 58.316 47.619 0.00 0.00 33.30 3.82
3374 3517 9.003658 ACTTGTTTATTGTAGATGGACAAGAAG 57.996 33.333 17.17 0.00 42.95 2.85
3389 3532 0.176680 AGAAGCTAGCCATCACCGTG 59.823 55.000 12.13 0.00 0.00 4.94
3419 3562 0.599558 CACCAGACAAGGGCAATGTG 59.400 55.000 0.00 0.00 0.00 3.21
3422 3565 0.251297 CAGACAAGGGCAATGTGGGA 60.251 55.000 0.00 0.00 0.00 4.37
3632 3775 3.391382 GCACTCACCCCCTACGCT 61.391 66.667 0.00 0.00 0.00 5.07
3659 3802 1.065410 TGGAGGAGAACTGGGGCAAA 61.065 55.000 0.00 0.00 0.00 3.68
3887 4030 4.699522 GGCACACACGGGTCCCTC 62.700 72.222 6.29 0.00 0.00 4.30
4064 4207 0.322277 CACCACCAGCTGAGAATGCT 60.322 55.000 17.39 0.00 42.06 3.79
4076 4219 4.318332 CTGAGAATGCTGGTCTGTACAAA 58.682 43.478 0.00 0.00 0.00 2.83
4130 4273 1.343069 ACCAGTCTCTCAAGGACACC 58.657 55.000 0.00 0.00 36.29 4.16
4268 4411 1.520787 CGTCGGGAAGGTGTATGGC 60.521 63.158 0.00 0.00 0.00 4.40
4460 4603 3.209410 CATTGAAGATGTCTACAGGGGC 58.791 50.000 0.00 0.00 0.00 5.80
5126 5269 2.100916 CCCTAGGATTGATGTCGTCGTT 59.899 50.000 11.48 0.00 0.00 3.85
5135 5278 1.918609 GATGTCGTCGTTAACTGCTCC 59.081 52.381 3.71 0.00 0.00 4.70
5173 5316 8.057623 AGATCTTTTCATCAACCAGGTATGAAT 58.942 33.333 15.75 4.28 38.89 2.57
5521 5664 1.069049 AGCCGCAAGTCTTTTGCATTT 59.931 42.857 11.83 0.00 45.14 2.32
5551 5694 2.194056 CCAGGGGTAGGCATGCTG 59.806 66.667 18.92 5.73 0.00 4.41
5566 5709 0.179059 TGCTGGAGAAACGCAAGACA 60.179 50.000 0.00 0.00 43.62 3.41
5812 5955 3.052033 AGCTACTGAACCCTAGGTGGTAT 60.052 47.826 8.29 0.00 37.76 2.73
5875 6018 1.666189 GAGAAGCGGCTGACAAATACC 59.334 52.381 1.81 0.00 0.00 2.73
5980 6123 0.908198 GGAAGAGGCTGATGGACACT 59.092 55.000 0.00 0.00 0.00 3.55
5992 6135 5.439721 CTGATGGACACTAATCCCAATTCA 58.560 41.667 0.00 0.00 38.06 2.57
6167 6310 3.960102 AGTTCCAGCATTTGACCAAGAAA 59.040 39.130 0.00 0.00 0.00 2.52
6242 6387 5.312895 AGTTGTAACATGCAATACAGACCA 58.687 37.500 9.43 0.00 33.85 4.02
6339 6487 3.253230 TGCTGTCACATGTTCATCTACG 58.747 45.455 0.00 0.00 0.00 3.51
6456 6604 4.331968 TGCAACAGTCCAATAGGTAAAGG 58.668 43.478 0.00 0.00 35.89 3.11
6462 6610 6.790319 ACAGTCCAATAGGTAAAGGTTTCAT 58.210 36.000 0.00 0.00 35.89 2.57
6932 7080 2.883122 ACGAGGTAGGAGAAGTCACT 57.117 50.000 0.00 0.00 0.00 3.41
6990 7138 7.578852 TGCTGCAATGAATTATCTTATCTTCG 58.421 34.615 0.00 0.00 0.00 3.79
7003 7151 5.533482 TCTTATCTTCGCCTATGCTTCTTC 58.467 41.667 0.00 0.00 34.43 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 139 0.331278 CATGGTAGCCAGGGGTTTCA 59.669 55.000 0.00 0.00 36.75 2.69
179 180 4.873810 TGCCGCGGGAATGGGATG 62.874 66.667 29.38 0.00 0.00 3.51
202 220 1.734465 GACAAAGGTTGCGATCTCTGG 59.266 52.381 0.00 0.00 0.00 3.86
267 314 2.919328 GGTTTGCTGGCTGGGCTT 60.919 61.111 0.00 0.00 0.00 4.35
268 315 4.223125 TGGTTTGCTGGCTGGGCT 62.223 61.111 0.00 0.00 0.00 5.19
269 316 3.994853 GTGGTTTGCTGGCTGGGC 61.995 66.667 0.00 0.00 0.00 5.36
270 317 3.305516 GGTGGTTTGCTGGCTGGG 61.306 66.667 0.00 0.00 0.00 4.45
271 318 1.684386 TTTGGTGGTTTGCTGGCTGG 61.684 55.000 0.00 0.00 0.00 4.85
272 319 0.530431 GTTTGGTGGTTTGCTGGCTG 60.530 55.000 0.00 0.00 0.00 4.85
273 320 1.822615 GTTTGGTGGTTTGCTGGCT 59.177 52.632 0.00 0.00 0.00 4.75
274 321 1.591327 CGTTTGGTGGTTTGCTGGC 60.591 57.895 0.00 0.00 0.00 4.85
345 393 3.577334 TTTGGTGATGCCCGTCCCC 62.577 63.158 0.00 0.00 36.04 4.81
346 394 2.034999 TTTGGTGATGCCCGTCCC 59.965 61.111 0.00 0.00 36.04 4.46
356 404 1.144708 TGATGCTTCCAGGTTTGGTGA 59.855 47.619 0.00 0.00 45.26 4.02
365 413 3.365820 GCATTTTCGTTTGATGCTTCCAG 59.634 43.478 0.00 0.00 42.12 3.86
366 414 3.243670 TGCATTTTCGTTTGATGCTTCCA 60.244 39.130 8.73 0.00 44.84 3.53
368 416 3.181550 CGTGCATTTTCGTTTGATGCTTC 60.182 43.478 8.73 0.00 44.84 3.86
369 417 2.725723 CGTGCATTTTCGTTTGATGCTT 59.274 40.909 8.73 0.00 44.84 3.91
400 448 5.592104 TTCTCCTTCCTTTGTTTTTCCAC 57.408 39.130 0.00 0.00 0.00 4.02
401 449 5.393678 CGTTTCTCCTTCCTTTGTTTTTCCA 60.394 40.000 0.00 0.00 0.00 3.53
413 461 1.653151 CGGATTCCGTTTCTCCTTCC 58.347 55.000 17.08 0.00 42.73 3.46
727 784 1.305213 TTGCCAAAGGGGAGGATGC 60.305 57.895 0.00 0.00 40.01 3.91
728 785 0.332632 TCTTGCCAAAGGGGAGGATG 59.667 55.000 0.00 0.00 35.66 3.51
729 786 1.084018 TTCTTGCCAAAGGGGAGGAT 58.916 50.000 0.00 0.00 40.30 3.24
730 787 0.856982 TTTCTTGCCAAAGGGGAGGA 59.143 50.000 0.00 0.00 38.88 3.71
731 788 0.969149 GTTTCTTGCCAAAGGGGAGG 59.031 55.000 0.00 0.00 40.01 4.30
732 789 0.969149 GGTTTCTTGCCAAAGGGGAG 59.031 55.000 0.00 0.00 40.01 4.30
733 790 0.560688 AGGTTTCTTGCCAAAGGGGA 59.439 50.000 0.00 0.00 40.01 4.81
734 791 2.302587 TAGGTTTCTTGCCAAAGGGG 57.697 50.000 0.00 0.00 40.85 4.79
735 792 4.340617 TGTATAGGTTTCTTGCCAAAGGG 58.659 43.478 0.00 0.00 33.90 3.95
736 793 6.405842 GGAATGTATAGGTTTCTTGCCAAAGG 60.406 42.308 0.00 0.00 33.90 3.11
737 794 6.405842 GGGAATGTATAGGTTTCTTGCCAAAG 60.406 42.308 0.00 0.00 34.45 2.77
738 795 5.420739 GGGAATGTATAGGTTTCTTGCCAAA 59.579 40.000 0.00 0.00 0.00 3.28
849 915 2.022240 GAGGGTGGTGGCTCTCGATC 62.022 65.000 0.00 0.00 0.00 3.69
851 917 2.680352 GAGGGTGGTGGCTCTCGA 60.680 66.667 0.00 0.00 0.00 4.04
863 929 1.303398 TCGTCTCTTCGCTGAGGGT 60.303 57.895 0.00 0.00 34.98 4.34
864 930 1.431440 CTCGTCTCTTCGCTGAGGG 59.569 63.158 5.01 0.00 34.98 4.30
866 932 0.179176 CACCTCGTCTCTTCGCTGAG 60.179 60.000 0.00 0.00 35.52 3.35
867 933 0.889638 ACACCTCGTCTCTTCGCTGA 60.890 55.000 0.00 0.00 0.00 4.26
868 934 0.803117 TACACCTCGTCTCTTCGCTG 59.197 55.000 0.00 0.00 0.00 5.18
869 935 1.088306 CTACACCTCGTCTCTTCGCT 58.912 55.000 0.00 0.00 0.00 4.93
870 936 0.803740 ACTACACCTCGTCTCTTCGC 59.196 55.000 0.00 0.00 0.00 4.70
920 986 3.721021 ACTACCACTGGCACCTAGTATT 58.279 45.455 0.00 0.00 0.00 1.89
971 1038 4.664064 TCCCCACCCGGATAAAATAATACA 59.336 41.667 0.73 0.00 0.00 2.29
1223 1290 0.959372 CAGGACGACGTAGACCACCT 60.959 60.000 17.98 10.22 0.00 4.00
1239 1306 3.376935 CTGGTACTGCGCCTCCAGG 62.377 68.421 21.31 9.33 42.38 4.45
1335 1402 4.103103 TCACGCAGCTCCTCGACG 62.103 66.667 6.56 0.00 0.00 5.12
1491 1558 2.750237 GGCATGGACGGGAACACC 60.750 66.667 0.00 0.00 0.00 4.16
1539 1606 2.439701 AGCTGCGCCATGCTGAAT 60.440 55.556 16.75 0.00 46.63 2.57
1953 2020 3.521529 GACGAGGCCGATGATGGGG 62.522 68.421 0.00 0.00 39.50 4.96
1957 2024 3.133014 CAGGACGAGGCCGATGAT 58.867 61.111 0.00 0.00 39.50 2.45
1974 2041 0.321919 TGACAATGTGGCTCCTCTGC 60.322 55.000 0.00 0.00 0.00 4.26
1978 2045 1.003355 CGGTGACAATGTGGCTCCT 60.003 57.895 0.00 0.00 36.91 3.69
2103 2170 0.974010 TGATGGGGTCGACCAGGTAC 60.974 60.000 34.40 20.60 45.20 3.34
2109 2176 1.078426 CTTGGTGATGGGGTCGACC 60.078 63.158 27.04 27.04 39.11 4.79
2388 2455 1.000396 GGGTGGCTTGCCTGATCTT 60.000 57.895 13.18 0.00 0.00 2.40
2476 2553 4.293415 CCTGCATCAAACACAAGAAAGAC 58.707 43.478 0.00 0.00 0.00 3.01
2588 2665 0.531532 CCAGGTGGATCGATGTGAGC 60.532 60.000 0.54 0.00 37.39 4.26
2604 2681 9.155975 GGATACTAGCAAATATACATCAACCAG 57.844 37.037 0.00 0.00 0.00 4.00
2620 2697 4.588899 ACAGTGCAATTTGGATACTAGCA 58.411 39.130 0.00 0.00 37.61 3.49
2622 2699 7.698130 GCTTAAACAGTGCAATTTGGATACTAG 59.302 37.037 0.00 0.00 37.61 2.57
2623 2700 7.393234 AGCTTAAACAGTGCAATTTGGATACTA 59.607 33.333 0.00 0.00 37.61 1.82
2624 2701 6.209391 AGCTTAAACAGTGCAATTTGGATACT 59.791 34.615 0.00 0.00 37.61 2.12
2625 2702 6.389906 AGCTTAAACAGTGCAATTTGGATAC 58.610 36.000 0.00 0.00 0.00 2.24
2626 2703 6.588719 AGCTTAAACAGTGCAATTTGGATA 57.411 33.333 0.00 0.00 0.00 2.59
2627 2704 5.473066 AGCTTAAACAGTGCAATTTGGAT 57.527 34.783 0.00 0.00 0.00 3.41
2632 2709 6.152379 GCTCTTTAGCTTAAACAGTGCAATT 58.848 36.000 0.00 0.00 45.85 2.32
2652 2729 6.325286 ACTACTTATAGGCTAGCTTTTGCTCT 59.675 38.462 15.72 3.59 43.21 4.09
2667 2744 4.913335 TGGACGCCAGAACTACTTATAG 57.087 45.455 0.00 0.00 34.25 1.31
2672 2749 1.751924 GAGATGGACGCCAGAACTACT 59.248 52.381 4.90 0.00 36.75 2.57
2682 2766 5.602628 ACCTTATTAAGAAGAGATGGACGC 58.397 41.667 11.41 0.00 0.00 5.19
2721 2805 7.390718 TGAACTAGCTGAGCTAATATGTCGATA 59.609 37.037 15.85 0.00 40.82 2.92
2739 2823 5.979517 AGTTTTCAGTTTGCAATGAACTAGC 59.020 36.000 13.67 4.65 35.68 3.42
2742 2826 5.105392 TCCAGTTTTCAGTTTGCAATGAACT 60.105 36.000 13.67 5.78 37.82 3.01
2743 2827 5.108517 TCCAGTTTTCAGTTTGCAATGAAC 58.891 37.500 13.67 3.49 35.25 3.18
2744 2828 5.336150 TCCAGTTTTCAGTTTGCAATGAA 57.664 34.783 10.69 10.69 33.73 2.57
2745 2829 4.998671 TCCAGTTTTCAGTTTGCAATGA 57.001 36.364 0.00 0.00 0.00 2.57
2746 2830 5.005971 CAGTTCCAGTTTTCAGTTTGCAATG 59.994 40.000 0.00 0.00 0.00 2.82
2747 2831 5.105392 TCAGTTCCAGTTTTCAGTTTGCAAT 60.105 36.000 0.00 0.00 0.00 3.56
2748 2832 4.219507 TCAGTTCCAGTTTTCAGTTTGCAA 59.780 37.500 0.00 0.00 0.00 4.08
2749 2833 3.761218 TCAGTTCCAGTTTTCAGTTTGCA 59.239 39.130 0.00 0.00 0.00 4.08
2750 2834 4.370364 TCAGTTCCAGTTTTCAGTTTGC 57.630 40.909 0.00 0.00 0.00 3.68
2754 2853 8.463930 TTGAATAATCAGTTCCAGTTTTCAGT 57.536 30.769 0.00 0.00 36.78 3.41
2813 2912 4.794648 TACATGCACCGGGCTGCC 62.795 66.667 11.05 11.05 45.15 4.85
2814 2913 3.204827 CTACATGCACCGGGCTGC 61.205 66.667 6.32 8.50 45.15 5.25
2815 2914 3.204827 GCTACATGCACCGGGCTG 61.205 66.667 6.32 9.21 45.15 4.85
2817 2916 2.897350 GAGCTACATGCACCGGGC 60.897 66.667 6.32 7.25 45.94 6.13
2818 2917 2.203070 GGAGCTACATGCACCGGG 60.203 66.667 6.32 0.00 42.21 5.73
2838 2937 4.157120 CCCCGGACCCTGCGTAAG 62.157 72.222 0.73 0.00 43.44 2.34
2844 2943 2.606519 TCTGTTCCCCGGACCCTG 60.607 66.667 0.73 0.00 0.00 4.45
2850 2949 2.554370 TTAGTTTGTCTGTTCCCCGG 57.446 50.000 0.00 0.00 0.00 5.73
2851 2950 3.670625 TGATTAGTTTGTCTGTTCCCCG 58.329 45.455 0.00 0.00 0.00 5.73
2852 2951 4.217767 GGTTGATTAGTTTGTCTGTTCCCC 59.782 45.833 0.00 0.00 0.00 4.81
2874 2981 6.548441 AATTTCAGTTTTTGCATGACATGG 57.452 33.333 17.03 0.00 0.00 3.66
2875 2982 8.301730 AGTAATTTCAGTTTTTGCATGACATG 57.698 30.769 11.27 11.27 0.00 3.21
2876 2983 7.326789 CGAGTAATTTCAGTTTTTGCATGACAT 59.673 33.333 0.00 0.00 0.00 3.06
2877 2984 6.636447 CGAGTAATTTCAGTTTTTGCATGACA 59.364 34.615 0.00 0.00 0.00 3.58
2878 2985 6.398935 GCGAGTAATTTCAGTTTTTGCATGAC 60.399 38.462 0.00 0.00 0.00 3.06
2880 2987 5.630680 AGCGAGTAATTTCAGTTTTTGCATG 59.369 36.000 0.00 0.00 0.00 4.06
2881 2988 5.772521 AGCGAGTAATTTCAGTTTTTGCAT 58.227 33.333 0.00 0.00 0.00 3.96
2882 2989 5.181690 AGCGAGTAATTTCAGTTTTTGCA 57.818 34.783 0.00 0.00 0.00 4.08
2883 2990 5.212194 TGAGCGAGTAATTTCAGTTTTTGC 58.788 37.500 0.00 0.00 0.00 3.68
2896 3024 6.034577 CGTTAATTGATCAACTGAGCGAGTAA 59.965 38.462 11.07 1.96 33.65 2.24
2914 3042 6.019779 TGGTGCAAGATAAAAGCGTTAATT 57.980 33.333 0.00 0.00 0.00 1.40
2921 3049 4.176271 GGTGAATGGTGCAAGATAAAAGC 58.824 43.478 0.00 0.00 0.00 3.51
2925 3053 3.088532 GTGGGTGAATGGTGCAAGATAA 58.911 45.455 0.00 0.00 0.00 1.75
2962 3090 1.138266 AGGCTTACGGCGTTGATATGT 59.862 47.619 21.24 0.00 42.94 2.29
2963 3091 1.526887 CAGGCTTACGGCGTTGATATG 59.473 52.381 21.24 8.88 42.94 1.78
3015 3143 6.491062 CCAGGATGCATTGGACTTTTCATATA 59.509 38.462 11.41 0.00 36.55 0.86
3040 3169 5.400782 CGATGCGATGATAGATAGGCATTAC 59.599 44.000 0.00 0.00 40.82 1.89
3059 3188 4.474226 ACTTTTCACTGAACTTCGATGC 57.526 40.909 0.00 0.00 0.00 3.91
3061 3190 6.292919 GCTGTTACTTTTCACTGAACTTCGAT 60.293 38.462 0.00 0.00 0.00 3.59
3072 3201 5.168526 TGTGATGTGCTGTTACTTTTCAC 57.831 39.130 0.00 0.00 0.00 3.18
3119 3248 9.760077 TTTTAAGGAGTAAGTAGAAGTTCAGTG 57.240 33.333 5.50 0.00 0.00 3.66
3142 3271 8.676401 CCACAAAGGATCTTTTGTTTCAATTTT 58.324 29.630 27.74 5.95 46.18 1.82
3146 3275 6.537453 TCCACAAAGGATCTTTTGTTTCAA 57.463 33.333 27.74 13.86 46.18 2.69
3180 3309 6.551385 AGTTTAAGATTCTGCAGTGAAGTG 57.449 37.500 14.67 0.00 0.00 3.16
3217 3346 7.255801 GGAATTTGACATGGAAGTGGAAAGTAA 60.256 37.037 0.00 0.00 0.00 2.24
3266 3395 3.423539 TTCACCCATGAGGAGTTTGAG 57.576 47.619 7.17 0.00 39.89 3.02
3356 3499 5.363939 GCTAGCTTCTTGTCCATCTACAAT 58.636 41.667 7.70 0.00 38.61 2.71
3374 3517 0.391130 TGAACACGGTGATGGCTAGC 60.391 55.000 16.29 6.04 0.00 3.42
3389 3532 0.108585 TGTCTGGTGGGAAGCTGAAC 59.891 55.000 0.00 0.00 0.00 3.18
3419 3562 0.253044 TCAGGTATGCTGCAGTTCCC 59.747 55.000 16.64 10.36 0.00 3.97
3422 3565 3.012518 GACATTCAGGTATGCTGCAGTT 58.987 45.455 16.64 6.05 0.00 3.16
3632 3775 2.237143 CCAGTTCTCCTCCAGCATGTTA 59.763 50.000 0.00 0.00 0.00 2.41
3659 3802 1.136329 AGTTGAGATGCCCAGGTGGT 61.136 55.000 0.00 0.00 36.04 4.16
3887 4030 1.376683 TTTCCCGGGCATGAACTCG 60.377 57.895 18.49 0.00 0.00 4.18
4064 4207 1.429930 TCAGCCCTTTGTACAGACCA 58.570 50.000 0.00 0.00 0.00 4.02
4268 4411 4.619973 GTGACTCTATCTCCATGAGCTTG 58.380 47.826 0.00 0.00 0.00 4.01
4460 4603 1.091771 CCAGTATGCCCTTGTCGCTG 61.092 60.000 0.00 0.00 31.97 5.18
4575 4718 7.164230 TGGAACTGAGTTTGTTTGTAACATT 57.836 32.000 0.00 0.00 41.79 2.71
5126 5269 0.753867 TGAACACACCGGAGCAGTTA 59.246 50.000 9.46 0.00 0.00 2.24
5135 5278 4.058124 TGAAAAGATCTCTGAACACACCG 58.942 43.478 0.00 0.00 0.00 4.94
5178 5321 0.174162 AAATCAAATGCAGAGGCGGC 59.826 50.000 0.00 0.00 45.35 6.53
5521 5664 1.556373 CCCCTGGAGCATCACTGTCA 61.556 60.000 0.00 0.00 36.25 3.58
5551 5694 3.814945 CTCAAATGTCTTGCGTTTCTCC 58.185 45.455 0.00 0.00 34.31 3.71
5812 5955 2.121948 CCACTCTTCATCATCCCCTCA 58.878 52.381 0.00 0.00 0.00 3.86
5875 6018 1.131126 GATGTTGCACTCCATCCAACG 59.869 52.381 8.37 0.00 41.17 4.10
5980 6123 5.595542 CAGCTTCCTGAATGAATTGGGATTA 59.404 40.000 0.00 0.00 41.77 1.75
5992 6135 2.560105 GGTTTGAAGCAGCTTCCTGAAT 59.440 45.455 28.73 0.00 41.77 2.57
6079 6222 3.083293 GTCTTCAACCTCCGAGTAGAGT 58.917 50.000 0.00 0.00 31.53 3.24
6167 6310 3.893813 ACTCAGCAAGGCAGAAGAATTTT 59.106 39.130 0.00 0.00 0.00 1.82
6242 6387 4.094830 ACGAACCACCCTCTTTGTTAAT 57.905 40.909 0.00 0.00 0.00 1.40
6312 6460 5.942236 AGATGAACATGTGACAGCAAAGTAT 59.058 36.000 18.76 0.63 0.00 2.12
6339 6487 8.184304 ACACTCCATTCTCTGTTACTATATCC 57.816 38.462 0.00 0.00 0.00 2.59
6456 6604 7.882179 AACACCATTGTTTCCTAGTATGAAAC 58.118 34.615 18.79 18.79 43.89 2.78
6462 6610 8.158132 TCACATTAACACCATTGTTTCCTAGTA 58.842 33.333 0.00 0.00 43.89 1.82
6491 6639 8.305317 ACTTTTACCTTATCAGTAGTCTCACAC 58.695 37.037 0.00 0.00 0.00 3.82
6990 7138 4.261363 GCCAATTACAGAAGAAGCATAGGC 60.261 45.833 0.00 0.00 41.61 3.93
7003 7151 6.263344 CAGTTCATCATCAAGCCAATTACAG 58.737 40.000 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.