Multiple sequence alignment - TraesCS2B01G157100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G157100 chr2B 100.000 6179 0 0 1 6179 131285109 131291287 0.000000e+00 11411.0
1 TraesCS2B01G157100 chr2B 87.847 757 65 18 1156 1897 131180161 131180905 0.000000e+00 863.0
2 TraesCS2B01G157100 chr2B 95.763 118 5 0 5672 5789 359312321 359312204 2.270000e-44 191.0
3 TraesCS2B01G157100 chr2B 88.235 102 9 3 4908 5007 137711036 137711136 1.090000e-22 119.0
4 TraesCS2B01G157100 chr2D 94.785 1745 74 6 544 2278 79873272 79875009 0.000000e+00 2702.0
5 TraesCS2B01G157100 chr2D 92.849 1720 74 23 627 2324 42934933 42933241 0.000000e+00 2449.0
6 TraesCS2B01G157100 chr2D 88.896 1540 102 48 4175 5680 79877134 79878638 0.000000e+00 1832.0
7 TraesCS2B01G157100 chr2D 85.613 1550 124 54 4175 5680 42888139 42886645 0.000000e+00 1535.0
8 TraesCS2B01G157100 chr2D 90.029 682 45 15 1226 1897 79686171 79686839 0.000000e+00 861.0
9 TraesCS2B01G157100 chr2D 98.241 398 7 0 5782 6179 42886644 42886247 0.000000e+00 697.0
10 TraesCS2B01G157100 chr2D 90.947 486 26 11 1 477 79872803 79873279 6.750000e-179 638.0
11 TraesCS2B01G157100 chr2D 94.250 400 21 2 5782 6179 79878635 79879034 1.470000e-170 610.0
12 TraesCS2B01G157100 chr2D 94.017 234 10 4 2415 2647 79875085 79875315 9.850000e-93 351.0
13 TraesCS2B01G157100 chr2D 82.143 420 40 17 3589 3981 79876486 79876897 1.660000e-85 327.0
14 TraesCS2B01G157100 chr2D 75.492 559 61 42 3669 4181 42888711 42888183 2.920000e-48 204.0
15 TraesCS2B01G157100 chr2D 94.059 101 5 1 2665 2764 42900049 42899949 1.070000e-32 152.0
16 TraesCS2B01G157100 chr2D 91.089 101 5 3 2433 2532 42933181 42933084 3.890000e-27 134.0
17 TraesCS2B01G157100 chr2D 81.250 128 22 2 2475 2601 79688209 79688335 1.100000e-17 102.0
18 TraesCS2B01G157100 chr2D 98.039 51 1 0 2720 2770 79875313 79875363 8.530000e-14 89.8
19 TraesCS2B01G157100 chr2A 90.464 2003 89 36 752 2716 80475358 80477296 0.000000e+00 2547.0
20 TraesCS2B01G157100 chr2A 88.425 1149 110 13 4552 5680 80478823 80479968 0.000000e+00 1363.0
21 TraesCS2B01G157100 chr2A 90.560 678 43 11 1226 1897 80264172 80264834 0.000000e+00 878.0
22 TraesCS2B01G157100 chr2A 89.027 401 20 11 5782 6179 80479965 80480344 5.600000e-130 475.0
23 TraesCS2B01G157100 chr2A 88.976 381 21 11 53 423 80461375 80461744 9.450000e-123 451.0
24 TraesCS2B01G157100 chr2A 86.111 360 32 16 4176 4532 80478417 80478761 7.560000e-99 372.0
25 TraesCS2B01G157100 chr2A 82.716 405 35 21 3605 3981 80477692 80478089 1.660000e-85 327.0
26 TraesCS2B01G157100 chr2A 88.318 214 16 7 545 756 80474869 80475075 1.330000e-61 248.0
27 TraesCS2B01G157100 chr2A 100.000 107 0 0 5679 5785 166787138 166787032 1.360000e-46 198.0
28 TraesCS2B01G157100 chr2A 91.852 135 7 4 5661 5794 32230217 32230086 1.060000e-42 185.0
29 TraesCS2B01G157100 chr2A 84.574 188 25 1 4984 5167 80267337 80267524 3.800000e-42 183.0
30 TraesCS2B01G157100 chr2A 95.652 69 3 0 2811 2879 80477325 80477393 1.820000e-20 111.0
31 TraesCS2B01G157100 chr2A 95.349 43 2 0 1 43 80460971 80461013 1.110000e-07 69.4
32 TraesCS2B01G157100 chr2A 100.000 28 0 0 491 518 734994982 734994955 1.100000e-02 52.8
33 TraesCS2B01G157100 chr5B 96.013 602 21 3 2882 3481 282846514 282847114 0.000000e+00 976.0
34 TraesCS2B01G157100 chr5B 94.333 600 28 4 2884 3481 492264641 492265236 0.000000e+00 915.0
35 TraesCS2B01G157100 chr5B 94.010 601 33 3 2883 3481 382630919 382631518 0.000000e+00 907.0
36 TraesCS2B01G157100 chr5B 95.309 405 19 0 4495 4899 546457205 546457609 1.450000e-180 643.0
37 TraesCS2B01G157100 chr5B 79.263 217 43 2 1627 1842 421834121 421833906 3.860000e-32 150.0
38 TraesCS2B01G157100 chr5B 89.216 102 8 3 4908 5007 534881834 534881734 2.340000e-24 124.0
39 TraesCS2B01G157100 chr5B 90.625 96 6 3 4908 5001 546457590 546457684 2.340000e-24 124.0
40 TraesCS2B01G157100 chr5B 87.037 108 14 0 1405 1512 421861409 421861302 8.410000e-24 122.0
41 TraesCS2B01G157100 chr5B 89.109 101 8 3 4908 5006 534873559 534873460 8.410000e-24 122.0
42 TraesCS2B01G157100 chr3D 94.176 601 30 5 2884 3481 131349061 131348463 0.000000e+00 911.0
43 TraesCS2B01G157100 chr3D 93.532 603 33 6 2883 3481 521591262 521590662 0.000000e+00 893.0
44 TraesCS2B01G157100 chr7D 93.171 615 40 2 2874 3487 405389530 405388917 0.000000e+00 902.0
45 TraesCS2B01G157100 chr7D 93.178 601 36 5 2884 3481 165113520 165112922 0.000000e+00 878.0
46 TraesCS2B01G157100 chr4D 93.189 602 35 6 2884 3481 221284717 221285316 0.000000e+00 880.0
47 TraesCS2B01G157100 chr4D 95.148 371 18 0 3108 3478 431671164 431671534 2.480000e-163 586.0
48 TraesCS2B01G157100 chr7B 93.178 601 35 6 2884 3481 138036693 138036096 0.000000e+00 878.0
49 TraesCS2B01G157100 chr7B 95.062 405 20 0 4495 4899 690176596 690177000 6.750000e-179 638.0
50 TraesCS2B01G157100 chr7B 93.798 129 6 2 5679 5807 423767093 423767219 6.320000e-45 193.0
51 TraesCS2B01G157100 chr7B 95.833 120 2 3 5669 5785 22070287 22070406 2.270000e-44 191.0
52 TraesCS2B01G157100 chr7B 91.667 96 5 3 4908 5001 690176981 690177075 5.030000e-26 130.0
53 TraesCS2B01G157100 chr7B 88.235 102 9 3 4908 5007 612587927 612588027 1.090000e-22 119.0
54 TraesCS2B01G157100 chr7B 94.595 37 1 1 491 526 891535 891571 8.650000e-04 56.5
55 TraesCS2B01G157100 chr7B 90.698 43 3 1 492 534 595572933 595572892 8.650000e-04 56.5
56 TraesCS2B01G157100 chr3B 95.062 405 20 0 4495 4899 35683133 35683537 6.750000e-179 638.0
57 TraesCS2B01G157100 chr3B 89.216 102 8 3 4908 5007 403866273 403866373 2.340000e-24 124.0
58 TraesCS2B01G157100 chrUn 94.815 405 21 0 4495 4899 205346200 205345796 3.140000e-177 632.0
59 TraesCS2B01G157100 chrUn 94.815 405 21 0 4495 4899 349933546 349933950 3.140000e-177 632.0
60 TraesCS2B01G157100 chrUn 93.827 405 25 0 4495 4899 168660148 168659744 1.470000e-170 610.0
61 TraesCS2B01G157100 chrUn 97.479 119 1 2 5677 5794 8133823 8133940 1.050000e-47 202.0
62 TraesCS2B01G157100 chrUn 95.763 118 3 2 5675 5792 260324738 260324623 8.180000e-44 189.0
63 TraesCS2B01G157100 chr1B 93.617 282 18 0 4618 4899 587582862 587583143 7.410000e-114 422.0
64 TraesCS2B01G157100 chr6B 96.522 115 4 0 5678 5792 489453844 489453730 2.270000e-44 191.0
65 TraesCS2B01G157100 chr6B 93.651 126 6 2 5661 5786 27997409 27997286 2.940000e-43 187.0
66 TraesCS2B01G157100 chr5D 79.325 237 47 2 1626 1861 357061773 357061538 1.380000e-36 165.0
67 TraesCS2B01G157100 chr5A 78.899 218 44 2 1626 1842 458316632 458316416 4.990000e-31 147.0
68 TraesCS2B01G157100 chr5A 100.000 28 0 0 3806 3833 621059929 621059956 1.100000e-02 52.8
69 TraesCS2B01G157100 chr7A 82.787 122 16 3 1398 1519 720912008 720912124 3.050000e-18 104.0
70 TraesCS2B01G157100 chr7A 100.000 28 0 0 3806 3833 388489336 388489309 1.100000e-02 52.8
71 TraesCS2B01G157100 chr4B 90.698 43 4 0 491 533 177860673 177860631 2.410000e-04 58.4
72 TraesCS2B01G157100 chr3A 100.000 28 0 0 3806 3833 149572338 149572365 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G157100 chr2B 131285109 131291287 6178 False 11411.000000 11411 100.000000 1 6179 1 chr2B.!!$F2 6178
1 TraesCS2B01G157100 chr2B 131180161 131180905 744 False 863.000000 863 87.847000 1156 1897 1 chr2B.!!$F1 741
2 TraesCS2B01G157100 chr2D 42933084 42934933 1849 True 1291.500000 2449 91.969000 627 2532 2 chr2D.!!$R3 1905
3 TraesCS2B01G157100 chr2D 79872803 79879034 6231 False 935.685714 2702 91.868143 1 6179 7 chr2D.!!$F2 6178
4 TraesCS2B01G157100 chr2D 42886247 42888711 2464 True 812.000000 1535 86.448667 3669 6179 3 chr2D.!!$R2 2510
5 TraesCS2B01G157100 chr2D 79686171 79688335 2164 False 481.500000 861 85.639500 1226 2601 2 chr2D.!!$F1 1375
6 TraesCS2B01G157100 chr2A 80474869 80480344 5475 False 777.571429 2547 88.673286 545 6179 7 chr2A.!!$F3 5634
7 TraesCS2B01G157100 chr2A 80264172 80267524 3352 False 530.500000 878 87.567000 1226 5167 2 chr2A.!!$F1 3941
8 TraesCS2B01G157100 chr2A 80460971 80461744 773 False 260.200000 451 92.162500 1 423 2 chr2A.!!$F2 422
9 TraesCS2B01G157100 chr5B 282846514 282847114 600 False 976.000000 976 96.013000 2882 3481 1 chr5B.!!$F1 599
10 TraesCS2B01G157100 chr5B 492264641 492265236 595 False 915.000000 915 94.333000 2884 3481 1 chr5B.!!$F3 597
11 TraesCS2B01G157100 chr5B 382630919 382631518 599 False 907.000000 907 94.010000 2883 3481 1 chr5B.!!$F2 598
12 TraesCS2B01G157100 chr3D 131348463 131349061 598 True 911.000000 911 94.176000 2884 3481 1 chr3D.!!$R1 597
13 TraesCS2B01G157100 chr3D 521590662 521591262 600 True 893.000000 893 93.532000 2883 3481 1 chr3D.!!$R2 598
14 TraesCS2B01G157100 chr7D 405388917 405389530 613 True 902.000000 902 93.171000 2874 3487 1 chr7D.!!$R2 613
15 TraesCS2B01G157100 chr7D 165112922 165113520 598 True 878.000000 878 93.178000 2884 3481 1 chr7D.!!$R1 597
16 TraesCS2B01G157100 chr4D 221284717 221285316 599 False 880.000000 880 93.189000 2884 3481 1 chr4D.!!$F1 597
17 TraesCS2B01G157100 chr7B 138036096 138036693 597 True 878.000000 878 93.178000 2884 3481 1 chr7B.!!$R1 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
573 934 0.034337 CTCGAGGAAAAACGGTGGGA 59.966 55.0 3.91 0.00 0.00 4.37 F
1207 1869 0.109597 GACGAAAGCGACGGGTAGAA 60.110 55.0 0.00 0.00 41.64 2.10 F
2338 4206 0.038526 AGCACCGTACTGTACTGCAC 60.039 55.0 24.87 12.18 33.70 4.57 F
4087 7313 0.098376 GAAGATAGGTCACGCGTCGT 59.902 55.0 9.86 3.12 42.36 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 2294 1.516386 CCCGGTCGATCACTTGTCG 60.516 63.158 0.00 0.00 40.3 4.35 R
2623 4501 0.466124 GGAGTGAGTAGGATGGGTGC 59.534 60.000 0.00 0.00 0.0 5.01 R
4180 7421 0.250727 GGTAGTTGCAGTTCAGGCCA 60.251 55.000 5.01 0.00 0.0 5.36 R
5768 9191 0.033796 ACATACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.0 4.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 1.404986 CCGCTGAGGTTGACCGATTAA 60.405 52.381 0.00 0.00 42.08 1.40
45 46 2.416836 CGCTGAGGTTGACCGATTAAGA 60.417 50.000 0.00 0.00 42.08 2.10
46 47 2.930682 GCTGAGGTTGACCGATTAAGAC 59.069 50.000 0.00 0.00 42.08 3.01
47 48 3.368531 GCTGAGGTTGACCGATTAAGACT 60.369 47.826 0.00 0.00 42.08 3.24
49 50 3.194968 TGAGGTTGACCGATTAAGACTCC 59.805 47.826 0.00 0.00 42.08 3.85
50 51 3.442076 AGGTTGACCGATTAAGACTCCT 58.558 45.455 0.00 0.00 42.08 3.69
60 413 2.820728 TAAGACTCCTCCATCCGTGA 57.179 50.000 0.00 0.00 0.00 4.35
193 547 2.586258 AGTGGATCGGTCAAATCGAG 57.414 50.000 0.00 0.00 40.09 4.04
197 551 1.409427 GGATCGGTCAAATCGAGGTCT 59.591 52.381 0.00 0.00 40.09 3.85
198 552 2.464865 GATCGGTCAAATCGAGGTCTG 58.535 52.381 0.00 0.00 40.09 3.51
200 554 0.389817 CGGTCAAATCGAGGTCTGCA 60.390 55.000 0.00 0.00 0.00 4.41
201 555 1.079503 GGTCAAATCGAGGTCTGCAC 58.920 55.000 0.00 0.00 0.00 4.57
202 556 1.608025 GGTCAAATCGAGGTCTGCACA 60.608 52.381 0.00 0.00 0.00 4.57
209 564 1.202639 TCGAGGTCTGCACACACAATT 60.203 47.619 0.00 0.00 0.00 2.32
270 625 3.565905 ACCCAACGAACGAGTACTTAG 57.434 47.619 0.00 0.00 0.00 2.18
272 627 3.319122 ACCCAACGAACGAGTACTTAGTT 59.681 43.478 14.84 14.84 0.00 2.24
273 628 4.202151 ACCCAACGAACGAGTACTTAGTTT 60.202 41.667 15.69 2.62 0.00 2.66
274 629 4.383948 CCCAACGAACGAGTACTTAGTTTC 59.616 45.833 15.69 7.53 0.00 2.78
277 632 6.345565 CCAACGAACGAGTACTTAGTTTCTTG 60.346 42.308 15.69 16.75 0.00 3.02
278 633 6.064846 ACGAACGAGTACTTAGTTTCTTGA 57.935 37.500 15.69 0.00 0.00 3.02
356 711 4.606457 GGTTCTGATGAAGAAACCATCG 57.394 45.455 0.00 0.00 45.52 3.84
357 712 3.375299 GGTTCTGATGAAGAAACCATCGG 59.625 47.826 0.00 0.00 45.52 4.18
358 713 3.981071 TCTGATGAAGAAACCATCGGT 57.019 42.857 10.58 0.00 44.02 4.69
378 736 4.440250 CGGTCTCAACCTTTATCTCATCGT 60.440 45.833 0.00 0.00 44.04 3.73
400 758 2.721797 CGAAACGCGAAGTGATCTTTGG 60.722 50.000 15.93 0.00 44.57 3.28
409 770 3.354089 AGTGATCTTTGGCAAAACACG 57.646 42.857 24.47 12.37 33.00 4.49
442 803 3.349006 CTGCGACAGGGCACACAC 61.349 66.667 0.00 0.00 38.17 3.82
443 804 4.168291 TGCGACAGGGCACACACA 62.168 61.111 0.00 0.00 38.17 3.72
444 805 2.669569 GCGACAGGGCACACACAT 60.670 61.111 0.00 0.00 0.00 3.21
445 806 2.969806 GCGACAGGGCACACACATG 61.970 63.158 0.00 0.00 0.00 3.21
446 807 1.597854 CGACAGGGCACACACATGT 60.598 57.895 0.00 0.00 40.80 3.21
451 812 2.159114 ACAGGGCACACACATGTTTTTC 60.159 45.455 0.00 0.00 36.72 2.29
459 820 5.509771 CACACACATGTTTTTCTGATCGAA 58.490 37.500 0.00 0.00 36.72 3.71
476 837 9.992910 TCTGATCGAATTATCAAAGAAAACATG 57.007 29.630 0.00 0.00 35.51 3.21
477 838 9.992910 CTGATCGAATTATCAAAGAAAACATGA 57.007 29.630 0.00 0.00 35.51 3.07
507 868 7.883391 TTTCCCATGTACTAAAGTTGAAACA 57.117 32.000 0.00 0.00 0.00 2.83
508 869 6.870971 TCCCATGTACTAAAGTTGAAACAC 57.129 37.500 0.00 0.00 0.00 3.32
509 870 6.597562 TCCCATGTACTAAAGTTGAAACACT 58.402 36.000 0.00 0.00 0.00 3.55
510 871 7.057894 TCCCATGTACTAAAGTTGAAACACTT 58.942 34.615 0.00 0.00 38.74 3.16
511 872 8.212312 TCCCATGTACTAAAGTTGAAACACTTA 58.788 33.333 0.00 0.00 35.87 2.24
512 873 9.010029 CCCATGTACTAAAGTTGAAACACTTAT 57.990 33.333 0.00 0.00 35.87 1.73
521 882 8.614994 AAAGTTGAAACACTTATTTTGAGACG 57.385 30.769 0.00 0.00 35.87 4.18
522 883 6.725246 AGTTGAAACACTTATTTTGAGACGG 58.275 36.000 0.00 0.00 0.00 4.79
523 884 5.682943 TGAAACACTTATTTTGAGACGGG 57.317 39.130 0.00 0.00 0.00 5.28
524 885 5.127491 TGAAACACTTATTTTGAGACGGGT 58.873 37.500 0.00 0.00 0.00 5.28
525 886 5.008217 TGAAACACTTATTTTGAGACGGGTG 59.992 40.000 0.00 0.00 0.00 4.61
526 887 3.408634 ACACTTATTTTGAGACGGGTGG 58.591 45.455 0.00 0.00 0.00 4.61
527 888 3.071892 ACACTTATTTTGAGACGGGTGGA 59.928 43.478 0.00 0.00 0.00 4.02
528 889 4.069304 CACTTATTTTGAGACGGGTGGAA 58.931 43.478 0.00 0.00 0.00 3.53
529 890 4.700213 CACTTATTTTGAGACGGGTGGAAT 59.300 41.667 0.00 0.00 0.00 3.01
530 891 5.878116 CACTTATTTTGAGACGGGTGGAATA 59.122 40.000 0.00 0.00 0.00 1.75
531 892 6.542370 CACTTATTTTGAGACGGGTGGAATAT 59.458 38.462 0.00 0.00 0.00 1.28
532 893 7.067008 CACTTATTTTGAGACGGGTGGAATATT 59.933 37.037 0.00 0.00 0.00 1.28
533 894 7.614192 ACTTATTTTGAGACGGGTGGAATATTT 59.386 33.333 0.00 0.00 0.00 1.40
534 895 5.637006 TTTTGAGACGGGTGGAATATTTG 57.363 39.130 0.00 0.00 0.00 2.32
535 896 4.561500 TTGAGACGGGTGGAATATTTGA 57.438 40.909 0.00 0.00 0.00 2.69
536 897 3.869065 TGAGACGGGTGGAATATTTGAC 58.131 45.455 0.00 0.00 0.00 3.18
537 898 3.262151 TGAGACGGGTGGAATATTTGACA 59.738 43.478 0.00 0.00 0.00 3.58
538 899 4.258543 GAGACGGGTGGAATATTTGACAA 58.741 43.478 0.00 0.00 0.00 3.18
539 900 4.261801 AGACGGGTGGAATATTTGACAAG 58.738 43.478 0.00 0.00 0.00 3.16
540 901 2.752903 ACGGGTGGAATATTTGACAAGC 59.247 45.455 0.00 0.00 0.00 4.01
541 902 2.099098 CGGGTGGAATATTTGACAAGCC 59.901 50.000 0.00 0.00 0.00 4.35
542 903 3.096092 GGGTGGAATATTTGACAAGCCA 58.904 45.455 0.00 0.00 0.00 4.75
543 904 3.513515 GGGTGGAATATTTGACAAGCCAA 59.486 43.478 0.00 0.00 0.00 4.52
557 918 3.004734 ACAAGCCAAAAAGATGGTTCTCG 59.995 43.478 0.00 0.00 42.75 4.04
573 934 0.034337 CTCGAGGAAAAACGGTGGGA 59.966 55.000 3.91 0.00 0.00 4.37
574 935 0.469070 TCGAGGAAAAACGGTGGGAA 59.531 50.000 0.00 0.00 0.00 3.97
610 972 2.328155 AAAACGTAGGTGGCGTGGGT 62.328 55.000 0.00 0.00 42.10 4.51
621 983 1.658114 GCGTGGGTGGAAAAGGAAC 59.342 57.895 0.00 0.00 0.00 3.62
623 985 0.466555 CGTGGGTGGAAAAGGAACCA 60.467 55.000 0.00 0.00 35.56 3.67
631 993 4.463050 TGGAAAAGGAACCACATAACCT 57.537 40.909 0.00 0.00 0.00 3.50
648 1010 7.168302 CACATAACCTTTGCGTATGTTTTCAAA 59.832 33.333 0.00 0.00 29.89 2.69
689 1051 3.135712 TGCAACTTCACTGTTCCCTTCTA 59.864 43.478 0.00 0.00 0.00 2.10
697 1059 2.166664 ACTGTTCCCTTCTATGTCGAGC 59.833 50.000 0.00 0.00 0.00 5.03
750 1112 7.541162 TCAACAGAAGAAATTCATTAGCATGG 58.459 34.615 0.00 0.00 0.00 3.66
768 1417 0.749454 GGAAGCATGTGCCTAGTGGG 60.749 60.000 0.57 0.00 43.38 4.61
815 1464 7.148323 ACGATCTATCTTGTATCGGATGAGAAG 60.148 40.741 0.00 0.58 45.13 2.85
817 1472 3.735237 TCTTGTATCGGATGAGAAGCC 57.265 47.619 0.00 0.00 0.00 4.35
1047 1709 2.985282 CTGGTGGCGGTGCAATGT 60.985 61.111 0.00 0.00 0.00 2.71
1207 1869 0.109597 GACGAAAGCGACGGGTAGAA 60.110 55.000 0.00 0.00 41.64 2.10
1593 2294 1.821136 CCTGAAAGCCATTGAGGAACC 59.179 52.381 0.00 0.00 41.22 3.62
1620 2321 2.616842 GTGATCGACCGGGCAATTAATT 59.383 45.455 8.76 0.00 0.00 1.40
1621 2322 3.810941 GTGATCGACCGGGCAATTAATTA 59.189 43.478 8.76 0.00 0.00 1.40
1928 2675 9.216117 GTAGTTAATTAATGACATAATCCGGCT 57.784 33.333 0.00 0.00 0.00 5.52
1952 2699 1.112113 ACACACGTCAACCTCAGTCT 58.888 50.000 0.00 0.00 0.00 3.24
2247 3007 2.507324 GAGAAGCTCGTCACGCCC 60.507 66.667 0.00 0.00 0.00 6.13
2331 4199 2.030562 GTGGCAGCACCGTACTGT 59.969 61.111 0.73 0.00 43.94 3.55
2332 4200 1.290955 GTGGCAGCACCGTACTGTA 59.709 57.895 0.73 0.00 43.94 2.74
2335 4203 0.736325 GGCAGCACCGTACTGTACTG 60.736 60.000 15.35 12.06 37.47 2.74
2336 4204 1.352156 GCAGCACCGTACTGTACTGC 61.352 60.000 21.96 21.96 45.46 4.40
2337 4205 0.038618 CAGCACCGTACTGTACTGCA 60.039 55.000 24.87 0.00 33.70 4.41
2338 4206 0.038526 AGCACCGTACTGTACTGCAC 60.039 55.000 24.87 12.18 33.70 4.57
2339 4207 1.012486 GCACCGTACTGTACTGCACC 61.012 60.000 20.72 3.99 32.15 5.01
2340 4208 0.315886 CACCGTACTGTACTGCACCA 59.684 55.000 15.35 0.00 0.00 4.17
2343 4211 0.731514 CGTACTGTACTGCACCACCG 60.732 60.000 15.35 0.00 0.00 4.94
2345 4213 2.162338 TACTGTACTGCACCACCGGC 62.162 60.000 0.00 0.00 0.00 6.13
2392 4260 7.094592 TGAGGCTAGTTAGTTAGATCATCATCG 60.095 40.741 0.00 0.00 33.75 3.84
2623 4501 3.631227 GCTACCTACCCTACACTACACTG 59.369 52.174 0.00 0.00 0.00 3.66
2638 4524 0.904649 CACTGCACCCATCCTACTCA 59.095 55.000 0.00 0.00 0.00 3.41
2652 4538 3.714798 TCCTACTCACTCCACCACTTTTT 59.285 43.478 0.00 0.00 0.00 1.94
2719 4605 8.947115 ACAAGATTAATTAAGCTAGTGTTGACC 58.053 33.333 15.92 0.00 30.76 4.02
2720 4606 8.398665 CAAGATTAATTAAGCTAGTGTTGACCC 58.601 37.037 15.92 0.00 30.76 4.46
2721 4607 7.630082 AGATTAATTAAGCTAGTGTTGACCCA 58.370 34.615 14.15 0.00 28.87 4.51
2739 4625 1.929169 CCATGCATCTCACACAGTACG 59.071 52.381 0.00 0.00 0.00 3.67
2770 4656 2.958355 CCTGGAGACTCCTCTCTGATTC 59.042 54.545 22.14 0.00 42.55 2.52
2773 4659 2.357637 GGAGACTCCTCTCTGATTCACG 59.642 54.545 14.72 0.00 42.55 4.35
2779 4725 6.829298 AGACTCCTCTCTGATTCACGTAATAA 59.171 38.462 0.00 0.00 0.00 1.40
2849 4795 8.738645 ATCTTGGACGAAAAATATCTTAAGCT 57.261 30.769 0.00 0.00 0.00 3.74
2949 5716 7.414873 GCTCAGCTCAACTCATATGAAAATTCA 60.415 37.037 6.90 0.00 42.14 2.57
3182 5959 5.065346 GGCCTAAATCTTCTCTGCACTTAAC 59.935 44.000 0.00 0.00 0.00 2.01
3190 5967 8.910351 ATCTTCTCTGCACTTAACTAAGTTTT 57.090 30.769 0.00 0.00 43.57 2.43
3487 6273 1.055849 TCTTGCAGCCCTACTTGTGA 58.944 50.000 0.00 0.00 0.00 3.58
3488 6274 1.630369 TCTTGCAGCCCTACTTGTGAT 59.370 47.619 0.00 0.00 0.00 3.06
3489 6275 2.040278 TCTTGCAGCCCTACTTGTGATT 59.960 45.455 0.00 0.00 0.00 2.57
3490 6276 1.825090 TGCAGCCCTACTTGTGATTG 58.175 50.000 0.00 0.00 0.00 2.67
3494 6280 2.163010 CAGCCCTACTTGTGATTGCTTG 59.837 50.000 0.00 0.00 0.00 4.01
3515 6301 3.276846 AACGGCGGCACAAGTGTC 61.277 61.111 13.24 0.00 0.00 3.67
3541 6329 3.094572 TGATGATCTGAGAGCACAGTGA 58.905 45.455 1.07 0.00 38.79 3.41
3542 6330 3.512724 TGATGATCTGAGAGCACAGTGAA 59.487 43.478 1.07 0.00 38.79 3.18
3555 6343 4.901627 GTGAAGCGCACAAGTGTC 57.098 55.556 11.47 0.00 46.91 3.67
3563 6402 1.804151 GCGCACAAGTGTCTTATTGGA 59.196 47.619 0.30 0.00 0.00 3.53
3579 6418 3.414549 TTGGAGTTTCTTTTGTGCGAC 57.585 42.857 0.00 0.00 0.00 5.19
3580 6419 1.673920 TGGAGTTTCTTTTGTGCGACC 59.326 47.619 0.00 0.00 0.00 4.79
3581 6420 1.001706 GGAGTTTCTTTTGTGCGACCC 60.002 52.381 0.00 0.00 0.00 4.46
3582 6421 0.661020 AGTTTCTTTTGTGCGACCCG 59.339 50.000 0.00 0.00 0.00 5.28
3583 6422 0.379316 GTTTCTTTTGTGCGACCCGT 59.621 50.000 0.00 0.00 0.00 5.28
3584 6423 0.658897 TTTCTTTTGTGCGACCCGTC 59.341 50.000 0.00 0.00 0.00 4.79
3585 6424 0.462225 TTCTTTTGTGCGACCCGTCA 60.462 50.000 0.00 0.00 0.00 4.35
3586 6425 0.462225 TCTTTTGTGCGACCCGTCAA 60.462 50.000 0.00 0.00 0.00 3.18
3587 6426 0.591170 CTTTTGTGCGACCCGTCAAT 59.409 50.000 0.00 0.00 0.00 2.57
3625 6600 4.831674 AGTACTAACCGGGTTGCTTTAT 57.168 40.909 22.44 1.41 0.00 1.40
3627 6602 3.994931 ACTAACCGGGTTGCTTTATCT 57.005 42.857 22.44 0.00 0.00 1.98
3639 6614 2.622470 TGCTTTATCTTGCTGCACAACA 59.378 40.909 0.00 0.00 33.68 3.33
3665 6640 5.996513 GCAGGAGGAGGCAATCATATATATG 59.003 44.000 15.47 15.47 35.04 1.78
3732 6709 5.461032 AATCAATACCCTTGCACGAAAAA 57.539 34.783 0.00 0.00 0.00 1.94
3761 6753 0.108615 CGCCAGACCAGTTAGACCAG 60.109 60.000 0.00 0.00 0.00 4.00
3784 6776 6.876257 CAGCACTTTATCCTACCAATATCCTC 59.124 42.308 0.00 0.00 0.00 3.71
3785 6777 6.789959 AGCACTTTATCCTACCAATATCCTCT 59.210 38.462 0.00 0.00 0.00 3.69
3789 6786 6.611613 TTATCCTACCAATATCCTCTGCAG 57.388 41.667 7.63 7.63 0.00 4.41
3794 6791 3.019564 ACCAATATCCTCTGCAGCAAAC 58.980 45.455 9.47 0.00 0.00 2.93
3795 6792 3.018856 CCAATATCCTCTGCAGCAAACA 58.981 45.455 9.47 0.00 0.00 2.83
3796 6793 3.444742 CCAATATCCTCTGCAGCAAACAA 59.555 43.478 9.47 0.00 0.00 2.83
3799 6796 6.015688 CCAATATCCTCTGCAGCAAACAATAT 60.016 38.462 9.47 3.81 0.00 1.28
3800 6797 4.913335 ATCCTCTGCAGCAAACAATATG 57.087 40.909 9.47 0.00 0.00 1.78
3801 6798 3.954200 TCCTCTGCAGCAAACAATATGA 58.046 40.909 9.47 0.00 0.00 2.15
3802 6799 4.529897 TCCTCTGCAGCAAACAATATGAT 58.470 39.130 9.47 0.00 0.00 2.45
3804 6801 5.761726 TCCTCTGCAGCAAACAATATGATAG 59.238 40.000 9.47 0.00 0.00 2.08
3805 6802 5.761726 CCTCTGCAGCAAACAATATGATAGA 59.238 40.000 9.47 0.00 0.00 1.98
3806 6803 6.430308 CCTCTGCAGCAAACAATATGATAGAT 59.570 38.462 9.47 0.00 0.00 1.98
3807 6804 7.605309 CCTCTGCAGCAAACAATATGATAGATA 59.395 37.037 9.47 0.00 0.00 1.98
3808 6805 9.163899 CTCTGCAGCAAACAATATGATAGATAT 57.836 33.333 9.47 0.00 0.00 1.63
3809 6806 9.511272 TCTGCAGCAAACAATATGATAGATATT 57.489 29.630 9.47 0.00 0.00 1.28
3822 6819 7.885209 ATGATAGATATTATGGGATGGAGGG 57.115 40.000 0.00 0.00 0.00 4.30
3823 6820 7.008770 TGATAGATATTATGGGATGGAGGGA 57.991 40.000 0.00 0.00 0.00 4.20
3826 6823 6.438111 AGATATTATGGGATGGAGGGAGTA 57.562 41.667 0.00 0.00 0.00 2.59
3833 6831 4.350245 TGGGATGGAGGGAGTATTATACG 58.650 47.826 0.00 0.00 0.00 3.06
3913 6925 9.128107 CTTGTAAGCAACAATGTGGTAATTTAG 57.872 33.333 5.26 0.00 46.81 1.85
3960 6972 0.102844 TTGCTCAAACTTGCAGCACC 59.897 50.000 12.89 0.00 39.35 5.01
3972 6984 1.202615 TGCAGCACCTGATCTAGATGC 60.203 52.381 10.74 8.63 32.44 3.91
3977 6989 3.007074 AGCACCTGATCTAGATGCAGATG 59.993 47.826 23.05 19.79 38.79 2.90
3978 6990 3.327626 CACCTGATCTAGATGCAGATGC 58.672 50.000 23.05 0.00 35.37 3.91
3988 7000 4.717988 GCAGATGCAGATCGACGA 57.282 55.556 0.00 0.00 41.59 4.20
3989 7001 2.963499 GCAGATGCAGATCGACGAA 58.037 52.632 0.00 0.00 41.59 3.85
3990 7002 0.574454 GCAGATGCAGATCGACGAAC 59.426 55.000 0.00 0.00 41.59 3.95
3991 7003 1.800655 GCAGATGCAGATCGACGAACT 60.801 52.381 0.00 0.51 41.59 3.01
3992 7004 1.851053 CAGATGCAGATCGACGAACTG 59.149 52.381 25.66 25.66 35.90 3.16
3993 7005 1.474478 AGATGCAGATCGACGAACTGT 59.526 47.619 28.65 15.27 35.38 3.55
3994 7006 2.094494 AGATGCAGATCGACGAACTGTT 60.094 45.455 28.65 19.65 35.38 3.16
3997 7214 1.125021 GCAGATCGACGAACTGTTGTG 59.875 52.381 28.65 11.54 35.38 3.33
4016 7233 5.092554 TGTGCAAATTACCGGAGATTAGA 57.907 39.130 9.46 0.00 0.00 2.10
4017 7234 5.680619 TGTGCAAATTACCGGAGATTAGAT 58.319 37.500 9.46 0.00 0.00 1.98
4018 7235 6.119536 TGTGCAAATTACCGGAGATTAGATT 58.880 36.000 9.46 0.00 0.00 2.40
4019 7236 7.276658 TGTGCAAATTACCGGAGATTAGATTA 58.723 34.615 9.46 0.00 0.00 1.75
4020 7237 7.441157 TGTGCAAATTACCGGAGATTAGATTAG 59.559 37.037 9.46 0.00 0.00 1.73
4022 7239 8.644216 TGCAAATTACCGGAGATTAGATTAGTA 58.356 33.333 9.46 0.00 0.00 1.82
4032 7249 7.486551 CGGAGATTAGATTAGTATACTTGCTGC 59.513 40.741 11.40 0.00 0.00 5.25
4035 7252 4.939052 AGATTAGTATACTTGCTGCCGT 57.061 40.909 11.40 0.00 0.00 5.68
4039 7256 1.197910 GTATACTTGCTGCCGTCGTC 58.802 55.000 0.00 0.00 0.00 4.20
4040 7257 0.101759 TATACTTGCTGCCGTCGTCC 59.898 55.000 0.00 0.00 0.00 4.79
4041 7258 1.884075 ATACTTGCTGCCGTCGTCCA 61.884 55.000 0.00 0.00 0.00 4.02
4052 7269 1.128692 CCGTCGTCCAGCAATTTTCTC 59.871 52.381 0.00 0.00 0.00 2.87
4065 7291 6.142320 CAGCAATTTTCTCCGAGTTAACAAAC 59.858 38.462 8.61 0.00 0.00 2.93
4080 7306 6.867293 AGTTAACAAACGAGAAGATAGGTCAC 59.133 38.462 8.61 0.00 0.00 3.67
4083 7309 0.377554 ACGAGAAGATAGGTCACGCG 59.622 55.000 3.53 3.53 34.59 6.01
4085 7311 1.595003 CGAGAAGATAGGTCACGCGTC 60.595 57.143 9.86 0.00 0.00 5.19
4086 7312 0.377554 AGAAGATAGGTCACGCGTCG 59.622 55.000 9.86 5.44 0.00 5.12
4087 7313 0.098376 GAAGATAGGTCACGCGTCGT 59.902 55.000 9.86 3.12 42.36 4.34
4089 7315 0.654683 AGATAGGTCACGCGTCGTAC 59.345 55.000 9.86 8.18 38.32 3.67
4090 7316 0.316524 GATAGGTCACGCGTCGTACC 60.317 60.000 21.54 21.54 38.32 3.34
4091 7317 1.026182 ATAGGTCACGCGTCGTACCA 61.026 55.000 27.43 17.67 38.32 3.25
4093 7319 2.253452 GTCACGCGTCGTACCAGT 59.747 61.111 9.86 0.00 38.32 4.00
4095 7321 2.503375 CACGCGTCGTACCAGTCC 60.503 66.667 9.86 0.00 38.32 3.85
4107 7333 3.861797 CAGTCCGCCCCGCCTAAT 61.862 66.667 0.00 0.00 0.00 1.73
4109 7335 2.124445 GTCCGCCCCGCCTAATTT 60.124 61.111 0.00 0.00 0.00 1.82
4111 7337 1.146707 TCCGCCCCGCCTAATTTAC 59.853 57.895 0.00 0.00 0.00 2.01
4112 7338 1.153127 CCGCCCCGCCTAATTTACA 60.153 57.895 0.00 0.00 0.00 2.41
4113 7339 1.164041 CCGCCCCGCCTAATTTACAG 61.164 60.000 0.00 0.00 0.00 2.74
4115 7341 0.750182 GCCCCGCCTAATTTACAGCA 60.750 55.000 0.00 0.00 0.00 4.41
4127 7360 1.438651 TTACAGCATGCGTGTTCTCC 58.561 50.000 22.11 0.00 42.53 3.71
4138 7371 3.190874 GCGTGTTCTCCAGGAAAGATAG 58.809 50.000 0.00 0.00 35.51 2.08
4140 7373 3.195825 CGTGTTCTCCAGGAAAGATAGGT 59.804 47.826 0.00 0.00 35.51 3.08
4183 7424 1.133025 GTGTTATCACCTGCACATGGC 59.867 52.381 0.00 0.00 39.74 4.40
4184 7425 0.740737 GTTATCACCTGCACATGGCC 59.259 55.000 0.00 0.00 43.89 5.36
4185 7426 0.625316 TTATCACCTGCACATGGCCT 59.375 50.000 3.32 0.00 43.89 5.19
4200 7491 1.298859 GGCCTGAACTGCAACTACCG 61.299 60.000 0.00 0.00 0.00 4.02
4202 7493 0.602638 CCTGAACTGCAACTACCGCA 60.603 55.000 0.00 0.00 37.88 5.69
4203 7494 1.225855 CTGAACTGCAACTACCGCAA 58.774 50.000 0.00 0.00 39.30 4.85
4225 7517 8.863049 CGCAAATATGTTCTTGCTTTCTTTAAT 58.137 29.630 7.94 0.00 44.62 1.40
4247 7540 3.077705 GCACATGCATTTGCGCAG 58.922 55.556 21.08 0.00 46.99 5.18
4268 7562 1.468520 CATGCGCCGAATTATTAGGGG 59.531 52.381 14.83 14.83 40.44 4.79
4269 7563 0.759959 TGCGCCGAATTATTAGGGGA 59.240 50.000 21.34 7.11 39.96 4.81
4271 7565 2.224670 TGCGCCGAATTATTAGGGGATT 60.225 45.455 21.34 0.00 39.96 3.01
4272 7566 3.008157 TGCGCCGAATTATTAGGGGATTA 59.992 43.478 21.34 7.07 39.96 1.75
4273 7567 4.196971 GCGCCGAATTATTAGGGGATTAT 58.803 43.478 21.34 0.00 39.96 1.28
4274 7568 5.104859 TGCGCCGAATTATTAGGGGATTATA 60.105 40.000 21.34 3.06 39.96 0.98
4275 7569 5.995897 GCGCCGAATTATTAGGGGATTATAT 59.004 40.000 21.34 0.00 39.96 0.86
4276 7570 7.156673 GCGCCGAATTATTAGGGGATTATATA 58.843 38.462 21.34 0.00 39.96 0.86
4277 7571 7.658575 GCGCCGAATTATTAGGGGATTATATAA 59.341 37.037 21.34 0.00 39.96 0.98
4278 7572 9.204570 CGCCGAATTATTAGGGGATTATATAAG 57.795 37.037 14.16 0.00 39.96 1.73
4279 7573 9.000486 GCCGAATTATTAGGGGATTATATAAGC 58.000 37.037 6.25 1.97 0.00 3.09
4297 7591 6.690194 ATAAGCTTTCATCTTGCTAGTTGG 57.310 37.500 3.20 0.00 35.85 3.77
4331 7625 2.491152 GTGGCCCATGTGCAATCG 59.509 61.111 0.00 0.00 0.00 3.34
4344 7638 2.929641 TGCAATCGCATCCTTCCAATA 58.070 42.857 0.00 0.00 45.36 1.90
4347 7641 4.455533 TGCAATCGCATCCTTCCAATATAC 59.544 41.667 0.00 0.00 45.36 1.47
4357 7664 7.576287 GCATCCTTCCAATATACATCACATTGG 60.576 40.741 6.28 6.28 46.69 3.16
4358 7665 5.769662 TCCTTCCAATATACATCACATTGGC 59.230 40.000 7.54 0.00 45.50 4.52
4359 7666 5.535783 CCTTCCAATATACATCACATTGGCA 59.464 40.000 7.54 0.00 45.50 4.92
4360 7667 6.389830 TTCCAATATACATCACATTGGCAC 57.610 37.500 7.54 0.00 45.50 5.01
4361 7668 5.444176 TCCAATATACATCACATTGGCACA 58.556 37.500 7.54 0.00 45.50 4.57
4362 7669 6.069994 TCCAATATACATCACATTGGCACAT 58.930 36.000 7.54 0.00 45.50 3.21
4363 7670 6.207221 TCCAATATACATCACATTGGCACATC 59.793 38.462 7.54 0.00 45.50 3.06
4364 7671 6.016108 CCAATATACATCACATTGGCACATCA 60.016 38.462 0.00 0.00 41.53 3.07
4365 7672 7.427214 CAATATACATCACATTGGCACATCAA 58.573 34.615 0.00 0.00 39.30 2.57
4366 7673 3.861276 ACATCACATTGGCACATCAAG 57.139 42.857 0.00 0.00 39.30 3.02
4367 7674 3.159472 ACATCACATTGGCACATCAAGT 58.841 40.909 0.00 0.00 39.30 3.16
4368 7675 3.575256 ACATCACATTGGCACATCAAGTT 59.425 39.130 0.00 0.00 39.30 2.66
4369 7676 3.921119 TCACATTGGCACATCAAGTTC 57.079 42.857 0.00 0.00 39.30 3.01
4370 7677 3.489355 TCACATTGGCACATCAAGTTCT 58.511 40.909 0.00 0.00 39.30 3.01
4371 7678 3.890756 TCACATTGGCACATCAAGTTCTT 59.109 39.130 0.00 0.00 39.30 2.52
4372 7679 4.341806 TCACATTGGCACATCAAGTTCTTT 59.658 37.500 0.00 0.00 39.30 2.52
4373 7680 5.051816 CACATTGGCACATCAAGTTCTTTT 58.948 37.500 0.00 0.00 39.30 2.27
4374 7681 5.050634 CACATTGGCACATCAAGTTCTTTTG 60.051 40.000 0.00 0.00 39.30 2.44
4401 7708 2.920724 TGGTTCGAAGAACCATGTCA 57.079 45.000 25.48 7.52 44.74 3.58
4407 7714 6.432783 TGGTTCGAAGAACCATGTCATAATTT 59.567 34.615 25.48 0.00 44.74 1.82
4541 7849 5.368230 TCTGGGTTTACAGGTATGCATGATA 59.632 40.000 10.16 0.00 38.98 2.15
4542 7850 5.620206 TGGGTTTACAGGTATGCATGATAG 58.380 41.667 10.16 0.00 0.00 2.08
4545 7853 2.462456 ACAGGTATGCATGATAGGCG 57.538 50.000 10.16 0.00 0.00 5.52
4562 7913 3.518590 AGGCGTTTTCGGATACTACTTG 58.481 45.455 0.00 0.00 44.29 3.16
4605 7977 8.102676 TGACATTCCAGAATAGAAGTGAAATGA 58.897 33.333 0.00 0.00 0.00 2.57
4678 8064 1.606601 TGGAGACACTGACGGGAGG 60.607 63.158 0.00 0.00 33.40 4.30
4732 8118 3.324930 CTCCAGCTCCCAGTGGCA 61.325 66.667 2.61 0.00 33.43 4.92
4782 8168 4.759693 CACCAAGGTGCTAACTTACAATCA 59.240 41.667 6.27 0.00 39.39 2.57
4785 8171 4.634012 AGGTGCTAACTTACAATCACCA 57.366 40.909 11.20 0.00 44.60 4.17
4826 8213 2.031560 TCACTGCAACAACAAGCTAACG 59.968 45.455 0.00 0.00 0.00 3.18
4832 8221 2.755836 ACAACAAGCTAACGCAACAG 57.244 45.000 0.00 0.00 39.10 3.16
4838 8227 3.315191 ACAAGCTAACGCAACAGATTGTT 59.685 39.130 6.32 0.00 46.19 2.83
4885 8274 5.705609 ACAGAAGTGCACGGAAATAATTT 57.294 34.783 12.01 0.00 0.00 1.82
4891 8280 6.584185 AGTGCACGGAAATAATTTTAACCT 57.416 33.333 12.01 0.00 0.00 3.50
4893 8282 6.015772 AGTGCACGGAAATAATTTTAACCTGT 60.016 34.615 12.01 0.00 0.00 4.00
4897 8286 7.061789 GCACGGAAATAATTTTAACCTGTTGAG 59.938 37.037 0.00 0.00 0.00 3.02
4899 8288 9.020731 ACGGAAATAATTTTAACCTGTTGAGAT 57.979 29.630 0.00 0.00 0.00 2.75
4900 8289 9.289303 CGGAAATAATTTTAACCTGTTGAGATG 57.711 33.333 0.00 0.00 0.00 2.90
4918 8307 9.727627 GTTGAGATGATCAGGATAATTTGAAAC 57.272 33.333 0.09 0.00 39.68 2.78
4922 8311 9.129532 AGATGATCAGGATAATTTGAAACCTTC 57.870 33.333 0.09 0.00 0.00 3.46
5244 8651 4.728882 GCTTCGCAGGTTGTATCATTTGAG 60.729 45.833 0.00 0.00 0.00 3.02
5359 8773 8.230486 GCAAATGTTCCATATAGATAGGAAACG 58.770 37.037 0.00 0.00 42.59 3.60
5397 8811 6.341316 TGTTAAGTCTGAAGATCTATGCCAC 58.659 40.000 0.00 0.00 0.00 5.01
5628 9051 7.340122 TCAAAGTATCAAACCACATGTTTCA 57.660 32.000 0.00 0.00 45.35 2.69
5684 9107 9.708092 GGTTTCACATAGATATAAAGTACTCCC 57.292 37.037 0.00 0.00 0.00 4.30
5687 9110 8.880991 TCACATAGATATAAAGTACTCCCTCC 57.119 38.462 0.00 0.00 0.00 4.30
5688 9111 7.610692 TCACATAGATATAAAGTACTCCCTCCG 59.389 40.741 0.00 0.00 0.00 4.63
5689 9112 7.393796 CACATAGATATAAAGTACTCCCTCCGT 59.606 40.741 0.00 0.00 0.00 4.69
5690 9113 7.949006 ACATAGATATAAAGTACTCCCTCCGTT 59.051 37.037 0.00 0.00 0.00 4.44
5691 9114 6.897706 AGATATAAAGTACTCCCTCCGTTC 57.102 41.667 0.00 0.00 0.00 3.95
5692 9115 5.472820 AGATATAAAGTACTCCCTCCGTTCG 59.527 44.000 0.00 0.00 0.00 3.95
5693 9116 0.893447 AAAGTACTCCCTCCGTTCGG 59.107 55.000 4.74 4.74 0.00 4.30
5694 9117 0.038744 AAGTACTCCCTCCGTTCGGA 59.961 55.000 13.34 13.34 0.00 4.55
5695 9118 0.038744 AGTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
5696 9119 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
5697 9120 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
5698 9121 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5699 9122 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5700 9123 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5701 9124 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5702 9125 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5703 9126 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5704 9127 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5705 9128 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
5706 9129 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
5707 9130 3.256383 TCCGTTCGGAATTACTTGTCTCA 59.744 43.478 11.66 0.00 0.00 3.27
5708 9131 3.612860 CCGTTCGGAATTACTTGTCTCAG 59.387 47.826 5.19 0.00 0.00 3.35
5709 9132 4.482386 CGTTCGGAATTACTTGTCTCAGA 58.518 43.478 0.00 0.00 0.00 3.27
5710 9133 4.921515 CGTTCGGAATTACTTGTCTCAGAA 59.078 41.667 0.00 0.00 0.00 3.02
5711 9134 5.404366 CGTTCGGAATTACTTGTCTCAGAAA 59.596 40.000 0.00 0.00 0.00 2.52
5712 9135 6.090898 CGTTCGGAATTACTTGTCTCAGAAAT 59.909 38.462 0.00 0.00 0.00 2.17
5713 9136 6.968131 TCGGAATTACTTGTCTCAGAAATG 57.032 37.500 0.00 0.00 0.00 2.32
5714 9137 5.874810 TCGGAATTACTTGTCTCAGAAATGG 59.125 40.000 0.00 0.00 0.00 3.16
5715 9138 5.874810 CGGAATTACTTGTCTCAGAAATGGA 59.125 40.000 0.00 0.00 0.00 3.41
5716 9139 6.540189 CGGAATTACTTGTCTCAGAAATGGAT 59.460 38.462 0.00 0.00 0.00 3.41
5717 9140 7.466455 CGGAATTACTTGTCTCAGAAATGGATG 60.466 40.741 0.00 0.00 0.00 3.51
5718 9141 7.337942 GGAATTACTTGTCTCAGAAATGGATGT 59.662 37.037 0.00 0.00 0.00 3.06
5719 9142 9.383519 GAATTACTTGTCTCAGAAATGGATGTA 57.616 33.333 0.00 0.00 0.00 2.29
5720 9143 9.911788 AATTACTTGTCTCAGAAATGGATGTAT 57.088 29.630 0.00 0.00 0.00 2.29
5721 9144 8.948631 TTACTTGTCTCAGAAATGGATGTATC 57.051 34.615 0.00 0.00 0.00 2.24
5722 9145 7.192852 ACTTGTCTCAGAAATGGATGTATCT 57.807 36.000 0.00 0.00 0.00 1.98
5723 9146 8.311395 ACTTGTCTCAGAAATGGATGTATCTA 57.689 34.615 0.00 0.00 0.00 1.98
5724 9147 8.420222 ACTTGTCTCAGAAATGGATGTATCTAG 58.580 37.037 0.00 0.00 0.00 2.43
5725 9148 8.539117 TTGTCTCAGAAATGGATGTATCTAGA 57.461 34.615 0.00 0.00 0.00 2.43
5726 9149 8.539117 TGTCTCAGAAATGGATGTATCTAGAA 57.461 34.615 0.00 0.00 0.00 2.10
5727 9150 8.417106 TGTCTCAGAAATGGATGTATCTAGAAC 58.583 37.037 0.00 0.00 0.00 3.01
5728 9151 8.637986 GTCTCAGAAATGGATGTATCTAGAACT 58.362 37.037 0.00 0.00 0.00 3.01
5729 9152 9.868160 TCTCAGAAATGGATGTATCTAGAACTA 57.132 33.333 0.00 0.00 0.00 2.24
5760 9183 9.900710 ACATCTAGATACATTCATTTCTACGAC 57.099 33.333 4.54 0.00 0.00 4.34
5761 9184 9.899226 CATCTAGATACATTCATTTCTACGACA 57.101 33.333 4.54 0.00 0.00 4.35
5763 9186 9.952188 TCTAGATACATTCATTTCTACGACAAG 57.048 33.333 0.00 0.00 0.00 3.16
5764 9187 9.737427 CTAGATACATTCATTTCTACGACAAGT 57.263 33.333 0.00 0.00 0.00 3.16
5770 9193 8.665685 ACATTCATTTCTACGACAAGTAATTCC 58.334 33.333 0.00 0.00 34.45 3.01
5771 9194 6.880822 TCATTTCTACGACAAGTAATTCCG 57.119 37.500 0.00 0.00 34.45 4.30
5772 9195 6.623486 TCATTTCTACGACAAGTAATTCCGA 58.377 36.000 0.00 0.00 34.45 4.55
5773 9196 7.092079 TCATTTCTACGACAAGTAATTCCGAA 58.908 34.615 0.00 0.00 34.45 4.30
5774 9197 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
5775 9198 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
5776 9199 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
5777 9200 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
5778 9201 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
5779 9202 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5780 9203 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5850 9277 2.352805 CGAAAAGCTGGGGCCTCT 59.647 61.111 3.07 0.00 39.73 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 3.437213 TGGAGGAGTCTTAATCGGTCAA 58.563 45.455 0.00 0.00 0.00 3.18
43 44 0.333312 ACTCACGGATGGAGGAGTCT 59.667 55.000 0.00 0.00 35.85 3.24
45 46 0.039764 TCACTCACGGATGGAGGAGT 59.960 55.000 0.00 0.00 41.04 3.85
46 47 1.407936 ATCACTCACGGATGGAGGAG 58.592 55.000 0.00 0.00 36.70 3.69
47 48 1.866015 AATCACTCACGGATGGAGGA 58.134 50.000 0.00 0.00 36.70 3.71
49 50 6.272822 TGATATAATCACTCACGGATGGAG 57.727 41.667 0.00 0.00 38.36 3.86
50 51 6.493458 TCTTGATATAATCACTCACGGATGGA 59.507 38.462 0.00 0.00 39.39 3.41
60 413 6.980978 CCGTGTCTTGTCTTGATATAATCACT 59.019 38.462 0.00 0.00 39.39 3.41
162 516 5.160607 ACCGATCCACTATTGAAAGTTGA 57.839 39.130 0.00 0.00 0.00 3.18
163 517 4.935205 TGACCGATCCACTATTGAAAGTTG 59.065 41.667 0.00 0.00 0.00 3.16
164 518 5.160607 TGACCGATCCACTATTGAAAGTT 57.839 39.130 0.00 0.00 0.00 2.66
193 547 1.334059 CGTGAATTGTGTGTGCAGACC 60.334 52.381 12.00 3.60 0.00 3.85
197 551 3.181492 ACAAATCGTGAATTGTGTGTGCA 60.181 39.130 2.65 0.00 38.29 4.57
198 552 3.371168 ACAAATCGTGAATTGTGTGTGC 58.629 40.909 2.65 0.00 38.29 4.57
200 554 4.319190 CGGTACAAATCGTGAATTGTGTGT 60.319 41.667 12.38 0.00 39.89 3.72
201 555 4.084276 TCGGTACAAATCGTGAATTGTGTG 60.084 41.667 12.38 3.87 39.89 3.82
202 556 4.059511 TCGGTACAAATCGTGAATTGTGT 58.940 39.130 12.38 0.00 39.89 3.72
209 564 3.311106 GTCTTGTCGGTACAAATCGTGA 58.689 45.455 0.00 0.00 44.79 4.35
270 625 1.725931 CGCCGCTGTCAATCAAGAAAC 60.726 52.381 0.00 0.00 0.00 2.78
272 627 0.602638 ACGCCGCTGTCAATCAAGAA 60.603 50.000 0.00 0.00 0.00 2.52
273 628 1.005037 ACGCCGCTGTCAATCAAGA 60.005 52.632 0.00 0.00 0.00 3.02
274 629 1.016130 AGACGCCGCTGTCAATCAAG 61.016 55.000 14.76 0.00 41.41 3.02
277 632 3.084579 CAGACGCCGCTGTCAATC 58.915 61.111 14.76 0.00 41.41 2.67
278 633 3.121030 GCAGACGCCGCTGTCAAT 61.121 61.111 14.76 0.00 41.41 2.57
356 711 5.012328 ACGATGAGATAAAGGTTGAGACC 57.988 43.478 0.00 0.00 46.92 3.85
357 712 4.735822 CGACGATGAGATAAAGGTTGAGAC 59.264 45.833 0.00 0.00 0.00 3.36
358 713 4.638865 TCGACGATGAGATAAAGGTTGAGA 59.361 41.667 0.00 0.00 0.00 3.27
378 736 2.060326 AAGATCACTTCGCGTTTCGA 57.940 45.000 5.77 0.00 46.88 3.71
387 745 3.730715 CGTGTTTTGCCAAAGATCACTTC 59.269 43.478 14.95 1.03 35.05 3.01
400 758 1.917303 CGGCCAATTATCGTGTTTTGC 59.083 47.619 2.24 0.00 0.00 3.68
409 770 1.009675 CAGCGCACGGCCAATTATC 60.010 57.895 11.47 0.00 45.17 1.75
433 794 2.100584 TCAGAAAAACATGTGTGTGCCC 59.899 45.455 0.00 0.00 38.92 5.36
451 812 9.992910 TCATGTTTTCTTTGATAATTCGATCAG 57.007 29.630 0.00 0.00 37.16 2.90
481 842 9.575868 TGTTTCAACTTTAGTACATGGGAAATA 57.424 29.630 0.00 0.00 0.00 1.40
482 843 8.357402 GTGTTTCAACTTTAGTACATGGGAAAT 58.643 33.333 0.00 0.00 0.00 2.17
483 844 7.558444 AGTGTTTCAACTTTAGTACATGGGAAA 59.442 33.333 0.00 0.00 0.00 3.13
484 845 7.057894 AGTGTTTCAACTTTAGTACATGGGAA 58.942 34.615 0.00 0.00 0.00 3.97
485 846 6.597562 AGTGTTTCAACTTTAGTACATGGGA 58.402 36.000 0.00 0.00 0.00 4.37
486 847 6.877611 AGTGTTTCAACTTTAGTACATGGG 57.122 37.500 0.00 0.00 0.00 4.00
495 856 9.710979 CGTCTCAAAATAAGTGTTTCAACTTTA 57.289 29.630 0.00 0.00 40.77 1.85
496 857 7.700656 CCGTCTCAAAATAAGTGTTTCAACTTT 59.299 33.333 0.00 0.00 40.77 2.66
497 858 7.193595 CCGTCTCAAAATAAGTGTTTCAACTT 58.806 34.615 0.00 0.00 42.89 2.66
498 859 6.238648 CCCGTCTCAAAATAAGTGTTTCAACT 60.239 38.462 0.00 0.00 0.00 3.16
499 860 5.912955 CCCGTCTCAAAATAAGTGTTTCAAC 59.087 40.000 0.00 0.00 0.00 3.18
500 861 5.591067 ACCCGTCTCAAAATAAGTGTTTCAA 59.409 36.000 0.00 0.00 0.00 2.69
501 862 5.008217 CACCCGTCTCAAAATAAGTGTTTCA 59.992 40.000 0.00 0.00 0.00 2.69
502 863 5.449304 CACCCGTCTCAAAATAAGTGTTTC 58.551 41.667 0.00 0.00 0.00 2.78
503 864 4.277423 CCACCCGTCTCAAAATAAGTGTTT 59.723 41.667 0.00 0.00 0.00 2.83
504 865 3.818773 CCACCCGTCTCAAAATAAGTGTT 59.181 43.478 0.00 0.00 0.00 3.32
505 866 3.071892 TCCACCCGTCTCAAAATAAGTGT 59.928 43.478 0.00 0.00 0.00 3.55
506 867 3.670625 TCCACCCGTCTCAAAATAAGTG 58.329 45.455 0.00 0.00 0.00 3.16
507 868 4.360951 TTCCACCCGTCTCAAAATAAGT 57.639 40.909 0.00 0.00 0.00 2.24
508 869 7.568199 AATATTCCACCCGTCTCAAAATAAG 57.432 36.000 0.00 0.00 0.00 1.73
509 870 7.612244 TCAAATATTCCACCCGTCTCAAAATAA 59.388 33.333 0.00 0.00 0.00 1.40
510 871 7.066525 GTCAAATATTCCACCCGTCTCAAAATA 59.933 37.037 0.00 0.00 0.00 1.40
511 872 5.949354 TCAAATATTCCACCCGTCTCAAAAT 59.051 36.000 0.00 0.00 0.00 1.82
512 873 5.182380 GTCAAATATTCCACCCGTCTCAAAA 59.818 40.000 0.00 0.00 0.00 2.44
513 874 4.698304 GTCAAATATTCCACCCGTCTCAAA 59.302 41.667 0.00 0.00 0.00 2.69
514 875 4.258543 GTCAAATATTCCACCCGTCTCAA 58.741 43.478 0.00 0.00 0.00 3.02
515 876 3.262151 TGTCAAATATTCCACCCGTCTCA 59.738 43.478 0.00 0.00 0.00 3.27
516 877 3.869065 TGTCAAATATTCCACCCGTCTC 58.131 45.455 0.00 0.00 0.00 3.36
517 878 3.992943 TGTCAAATATTCCACCCGTCT 57.007 42.857 0.00 0.00 0.00 4.18
518 879 3.181500 GCTTGTCAAATATTCCACCCGTC 60.181 47.826 0.00 0.00 0.00 4.79
519 880 2.752903 GCTTGTCAAATATTCCACCCGT 59.247 45.455 0.00 0.00 0.00 5.28
520 881 2.099098 GGCTTGTCAAATATTCCACCCG 59.901 50.000 0.00 0.00 0.00 5.28
521 882 3.096092 TGGCTTGTCAAATATTCCACCC 58.904 45.455 0.00 0.00 0.00 4.61
522 883 4.799564 TTGGCTTGTCAAATATTCCACC 57.200 40.909 0.00 0.00 0.00 4.61
523 884 6.928492 TCTTTTTGGCTTGTCAAATATTCCAC 59.072 34.615 1.09 0.00 36.63 4.02
524 885 7.060383 TCTTTTTGGCTTGTCAAATATTCCA 57.940 32.000 1.09 0.00 36.63 3.53
525 886 7.064966 CCATCTTTTTGGCTTGTCAAATATTCC 59.935 37.037 1.09 0.00 36.63 3.01
526 887 7.603784 ACCATCTTTTTGGCTTGTCAAATATTC 59.396 33.333 1.09 0.00 40.68 1.75
527 888 7.452562 ACCATCTTTTTGGCTTGTCAAATATT 58.547 30.769 1.09 0.00 40.68 1.28
528 889 7.008021 ACCATCTTTTTGGCTTGTCAAATAT 57.992 32.000 1.09 0.00 40.68 1.28
529 890 6.418057 ACCATCTTTTTGGCTTGTCAAATA 57.582 33.333 1.09 0.00 40.68 1.40
530 891 5.294734 ACCATCTTTTTGGCTTGTCAAAT 57.705 34.783 1.09 0.00 40.68 2.32
531 892 4.751767 ACCATCTTTTTGGCTTGTCAAA 57.248 36.364 0.00 0.00 40.68 2.69
532 893 4.405358 AGAACCATCTTTTTGGCTTGTCAA 59.595 37.500 0.00 0.00 40.68 3.18
533 894 3.960102 AGAACCATCTTTTTGGCTTGTCA 59.040 39.130 0.00 0.00 40.68 3.58
534 895 4.550422 GAGAACCATCTTTTTGGCTTGTC 58.450 43.478 0.00 0.00 40.68 3.18
535 896 3.004734 CGAGAACCATCTTTTTGGCTTGT 59.995 43.478 0.00 0.00 40.68 3.16
536 897 3.253188 TCGAGAACCATCTTTTTGGCTTG 59.747 43.478 0.00 0.00 40.68 4.01
537 898 3.486383 TCGAGAACCATCTTTTTGGCTT 58.514 40.909 0.00 0.00 40.68 4.35
538 899 3.077359 CTCGAGAACCATCTTTTTGGCT 58.923 45.455 6.58 0.00 40.68 4.75
539 900 2.162408 CCTCGAGAACCATCTTTTTGGC 59.838 50.000 15.71 0.00 40.68 4.52
540 901 3.674997 TCCTCGAGAACCATCTTTTTGG 58.325 45.455 15.71 0.00 42.82 3.28
541 902 5.689383 TTTCCTCGAGAACCATCTTTTTG 57.311 39.130 15.71 0.00 35.54 2.44
542 903 6.504398 GTTTTTCCTCGAGAACCATCTTTTT 58.496 36.000 15.71 0.00 35.54 1.94
543 904 5.277828 CGTTTTTCCTCGAGAACCATCTTTT 60.278 40.000 15.71 0.00 35.54 2.27
557 918 3.804786 TTTTTCCCACCGTTTTTCCTC 57.195 42.857 0.00 0.00 0.00 3.71
610 972 4.463050 AGGTTATGTGGTTCCTTTTCCA 57.537 40.909 0.00 0.00 0.00 3.53
621 983 4.695217 AACATACGCAAAGGTTATGTGG 57.305 40.909 0.00 0.00 32.42 4.17
623 985 6.320494 TGAAAACATACGCAAAGGTTATGT 57.680 33.333 0.00 0.00 33.32 2.29
624 986 7.630470 TTTGAAAACATACGCAAAGGTTATG 57.370 32.000 0.00 0.00 0.00 1.90
625 987 9.349145 GTATTTGAAAACATACGCAAAGGTTAT 57.651 29.630 0.00 0.00 34.21 1.89
626 988 7.534578 CGTATTTGAAAACATACGCAAAGGTTA 59.465 33.333 0.00 0.00 41.18 2.85
627 989 6.361214 CGTATTTGAAAACATACGCAAAGGTT 59.639 34.615 0.00 0.00 41.18 3.50
629 991 6.081049 TCGTATTTGAAAACATACGCAAAGG 58.919 36.000 6.80 0.00 45.16 3.11
631 993 6.889494 TCTCGTATTTGAAAACATACGCAAA 58.111 32.000 6.80 0.00 45.16 3.68
648 1010 2.996621 GCAACTTGCAAGTCTCTCGTAT 59.003 45.455 31.20 11.34 44.26 3.06
689 1051 1.893137 TGTTAGTCTGGTGCTCGACAT 59.107 47.619 0.00 0.00 32.68 3.06
697 1059 2.095059 GCCATTTGCTGTTAGTCTGGTG 60.095 50.000 0.00 0.00 36.87 4.17
750 1112 2.785868 CCCACTAGGCACATGCTTC 58.214 57.895 3.48 0.00 41.70 3.86
768 1417 0.317269 CATTTGATCCGTCCATGCGC 60.317 55.000 0.00 0.00 0.00 6.09
1020 1682 3.745803 GCCACCAGCAGCAAGAGC 61.746 66.667 0.00 0.00 42.97 4.09
1593 2294 1.516386 CCCGGTCGATCACTTGTCG 60.516 63.158 0.00 0.00 40.30 4.35
1620 2321 2.046796 TTCGCCGCTGCACCATTA 60.047 55.556 0.00 0.00 37.32 1.90
1621 2322 3.737172 GTTCGCCGCTGCACCATT 61.737 61.111 0.00 0.00 37.32 3.16
1928 2675 2.515057 GGTTGACGTGTGTGGCCA 60.515 61.111 0.00 0.00 0.00 5.36
1952 2699 2.732016 CGTCGTCAGGGGTGACAA 59.268 61.111 6.36 0.00 38.65 3.18
2184 2944 2.047002 TGTAGATGTCGATGTCCCGA 57.953 50.000 0.00 0.00 36.06 5.14
2336 4204 3.118454 CAGTTAGCGCCGGTGGTG 61.118 66.667 29.06 8.95 36.10 4.17
2351 4219 3.661944 AGCCTCATCGATCATTTAGCAG 58.338 45.455 0.00 0.00 0.00 4.24
2392 4260 6.817765 TCATGTCAAGAAAAACATCCCTAC 57.182 37.500 0.00 0.00 33.92 3.18
2431 4304 9.620660 AGCAAACTTAATTACTAAAACCAATCG 57.379 29.630 0.00 0.00 0.00 3.34
2604 4482 2.225192 TGCAGTGTAGTGTAGGGTAGGT 60.225 50.000 0.00 0.00 0.00 3.08
2623 4501 0.466124 GGAGTGAGTAGGATGGGTGC 59.534 60.000 0.00 0.00 0.00 5.01
2660 4546 3.073209 TGGGCAACTACCTACATTTGTCA 59.927 43.478 0.00 0.00 0.00 3.58
2661 4547 3.681593 TGGGCAACTACCTACATTTGTC 58.318 45.455 0.00 0.00 0.00 3.18
2663 4549 3.950397 TCTGGGCAACTACCTACATTTG 58.050 45.455 0.00 0.00 0.00 2.32
2716 4602 1.339438 ACTGTGTGAGATGCATGGGTC 60.339 52.381 2.46 0.00 0.00 4.46
2719 4605 1.929169 CGTACTGTGTGAGATGCATGG 59.071 52.381 2.46 0.00 0.00 3.66
2720 4606 2.879826 TCGTACTGTGTGAGATGCATG 58.120 47.619 2.46 0.00 0.00 4.06
2721 4607 3.808466 ATCGTACTGTGTGAGATGCAT 57.192 42.857 0.00 0.00 0.00 3.96
2739 4625 2.693074 GGAGTCTCCAGGTCTCTGAATC 59.307 54.545 14.46 0.00 43.49 2.52
2803 4749 8.954350 CAAGATAATGAAAGATGAAGACCAAGT 58.046 33.333 0.00 0.00 0.00 3.16
2804 4750 8.404000 CCAAGATAATGAAAGATGAAGACCAAG 58.596 37.037 0.00 0.00 0.00 3.61
2806 4752 7.554118 GTCCAAGATAATGAAAGATGAAGACCA 59.446 37.037 0.00 0.00 0.00 4.02
2808 4754 7.492669 TCGTCCAAGATAATGAAAGATGAAGAC 59.507 37.037 0.00 0.00 0.00 3.01
2849 4795 4.695993 TGATGCAAGCGACGGCCA 62.696 61.111 2.24 0.00 41.24 5.36
2949 5716 3.386768 TCACTTAGTTTGAGCTCGCTT 57.613 42.857 9.64 0.00 0.00 4.68
3190 5967 8.112016 TCCATTTTATTTACCAACGAACATGA 57.888 30.769 0.00 0.00 0.00 3.07
3515 6301 5.163530 ACTGTGCTCTCAGATCATCACTAAG 60.164 44.000 6.02 0.00 38.63 2.18
3541 6329 2.226437 CCAATAAGACACTTGTGCGCTT 59.774 45.455 9.73 11.97 0.00 4.68
3542 6330 1.806542 CCAATAAGACACTTGTGCGCT 59.193 47.619 9.73 0.00 0.00 5.92
3551 6339 6.417930 GCACAAAAGAAACTCCAATAAGACAC 59.582 38.462 0.00 0.00 0.00 3.67
3552 6340 6.503524 GCACAAAAGAAACTCCAATAAGACA 58.496 36.000 0.00 0.00 0.00 3.41
3553 6341 5.625311 CGCACAAAAGAAACTCCAATAAGAC 59.375 40.000 0.00 0.00 0.00 3.01
3554 6342 5.529430 TCGCACAAAAGAAACTCCAATAAGA 59.471 36.000 0.00 0.00 0.00 2.10
3555 6343 5.625311 GTCGCACAAAAGAAACTCCAATAAG 59.375 40.000 0.00 0.00 0.00 1.73
3563 6402 0.661020 CGGGTCGCACAAAAGAAACT 59.339 50.000 0.00 0.00 0.00 2.66
3579 6418 0.734889 GTTGAGGCATGATTGACGGG 59.265 55.000 0.00 0.00 35.32 5.28
3580 6419 1.742761 AGTTGAGGCATGATTGACGG 58.257 50.000 0.00 0.00 35.32 4.79
3581 6420 3.525537 AGTAGTTGAGGCATGATTGACG 58.474 45.455 0.00 0.00 35.32 4.35
3582 6421 6.109359 ACTTAGTAGTTGAGGCATGATTGAC 58.891 40.000 0.00 0.00 0.00 3.18
3583 6422 6.299805 ACTTAGTAGTTGAGGCATGATTGA 57.700 37.500 0.00 0.00 0.00 2.57
3584 6423 7.268586 AGTACTTAGTAGTTGAGGCATGATTG 58.731 38.462 0.00 0.00 35.78 2.67
3585 6424 7.425224 AGTACTTAGTAGTTGAGGCATGATT 57.575 36.000 0.00 0.00 35.78 2.57
3586 6425 8.414778 GTTAGTACTTAGTAGTTGAGGCATGAT 58.585 37.037 0.00 0.00 35.78 2.45
3587 6426 7.147949 GGTTAGTACTTAGTAGTTGAGGCATGA 60.148 40.741 0.00 0.00 35.78 3.07
3639 6614 0.851469 ATGATTGCCTCCTCCTGCAT 59.149 50.000 0.00 0.00 37.33 3.96
3642 6617 7.134362 ACATATATATGATTGCCTCCTCCTG 57.866 40.000 26.05 0.00 37.15 3.86
3665 6640 2.029918 GCAAGGGTTCACTGGAATCAAC 60.030 50.000 0.00 0.00 35.77 3.18
3761 6753 6.876257 CAGAGGATATTGGTAGGATAAAGTGC 59.124 42.308 0.00 0.00 0.00 4.40
3796 6793 9.571823 CCCTCCATCCCATAATATCTATCATAT 57.428 37.037 0.00 0.00 0.00 1.78
3799 6796 7.008770 TCCCTCCATCCCATAATATCTATCA 57.991 40.000 0.00 0.00 0.00 2.15
3800 6797 7.079048 ACTCCCTCCATCCCATAATATCTATC 58.921 42.308 0.00 0.00 0.00 2.08
3801 6798 7.014736 ACTCCCTCCATCCCATAATATCTAT 57.985 40.000 0.00 0.00 0.00 1.98
3802 6799 6.438111 ACTCCCTCCATCCCATAATATCTA 57.562 41.667 0.00 0.00 0.00 1.98
3804 6801 7.698163 AATACTCCCTCCATCCCATAATATC 57.302 40.000 0.00 0.00 0.00 1.63
3806 6803 9.670442 GTATAATACTCCCTCCATCCCATAATA 57.330 37.037 0.00 0.00 0.00 0.98
3807 6804 7.290248 CGTATAATACTCCCTCCATCCCATAAT 59.710 40.741 0.00 0.00 0.00 1.28
3808 6805 6.610020 CGTATAATACTCCCTCCATCCCATAA 59.390 42.308 0.00 0.00 0.00 1.90
3809 6806 6.134055 CGTATAATACTCCCTCCATCCCATA 58.866 44.000 0.00 0.00 0.00 2.74
3811 6808 4.350245 CGTATAATACTCCCTCCATCCCA 58.650 47.826 0.00 0.00 0.00 4.37
3812 6809 3.132467 GCGTATAATACTCCCTCCATCCC 59.868 52.174 0.00 0.00 0.00 3.85
3813 6810 3.132467 GGCGTATAATACTCCCTCCATCC 59.868 52.174 0.00 0.00 0.00 3.51
3814 6811 4.388378 GGCGTATAATACTCCCTCCATC 57.612 50.000 0.00 0.00 0.00 3.51
3848 6848 2.379030 GATGCACCTACCCCTACCGC 62.379 65.000 0.00 0.00 0.00 5.68
3913 6925 5.823045 ACCAGCCTTTTCAGCATACTAATAC 59.177 40.000 0.00 0.00 0.00 1.89
3916 6928 4.301072 ACCAGCCTTTTCAGCATACTAA 57.699 40.909 0.00 0.00 0.00 2.24
3920 6932 2.170166 CCAACCAGCCTTTTCAGCATA 58.830 47.619 0.00 0.00 0.00 3.14
3927 6939 0.752658 GAGCAACCAACCAGCCTTTT 59.247 50.000 0.00 0.00 0.00 2.27
3972 6984 1.851053 CAGTTCGTCGATCTGCATCTG 59.149 52.381 17.79 5.51 0.00 2.90
3977 6989 1.125021 CACAACAGTTCGTCGATCTGC 59.875 52.381 25.94 6.01 33.98 4.26
3978 6990 1.125021 GCACAACAGTTCGTCGATCTG 59.875 52.381 24.89 24.89 36.00 2.90
3979 6991 1.269569 TGCACAACAGTTCGTCGATCT 60.270 47.619 0.00 0.00 0.00 2.75
3980 6992 1.136690 TGCACAACAGTTCGTCGATC 58.863 50.000 0.00 0.00 0.00 3.69
3981 6993 1.577468 TTGCACAACAGTTCGTCGAT 58.423 45.000 0.00 0.00 0.00 3.59
3982 6994 1.360820 TTTGCACAACAGTTCGTCGA 58.639 45.000 0.00 0.00 0.00 4.20
3983 6995 2.383298 ATTTGCACAACAGTTCGTCG 57.617 45.000 0.00 0.00 0.00 5.12
3984 6996 3.972502 GGTAATTTGCACAACAGTTCGTC 59.027 43.478 0.00 0.00 0.00 4.20
3985 6997 3.547214 CGGTAATTTGCACAACAGTTCGT 60.547 43.478 0.00 0.00 0.00 3.85
3986 6998 2.970609 CGGTAATTTGCACAACAGTTCG 59.029 45.455 0.00 0.00 0.00 3.95
3988 7000 2.952978 TCCGGTAATTTGCACAACAGTT 59.047 40.909 0.00 0.00 0.00 3.16
3989 7001 2.552315 CTCCGGTAATTTGCACAACAGT 59.448 45.455 0.00 0.00 0.00 3.55
3990 7002 2.811431 TCTCCGGTAATTTGCACAACAG 59.189 45.455 0.00 0.00 0.00 3.16
3991 7003 2.852449 TCTCCGGTAATTTGCACAACA 58.148 42.857 0.00 0.00 0.00 3.33
3992 7004 4.434713 AATCTCCGGTAATTTGCACAAC 57.565 40.909 0.00 0.00 0.00 3.32
3993 7005 5.492895 TCTAATCTCCGGTAATTTGCACAA 58.507 37.500 0.00 0.00 0.00 3.33
3994 7006 5.092554 TCTAATCTCCGGTAATTTGCACA 57.907 39.130 0.00 0.00 0.00 4.57
3997 7214 7.964604 ACTAATCTAATCTCCGGTAATTTGC 57.035 36.000 0.00 0.00 0.00 3.68
4016 7233 3.067742 ACGACGGCAGCAAGTATACTAAT 59.932 43.478 5.65 0.00 0.00 1.73
4017 7234 2.424601 ACGACGGCAGCAAGTATACTAA 59.575 45.455 5.65 0.00 0.00 2.24
4018 7235 2.019249 ACGACGGCAGCAAGTATACTA 58.981 47.619 5.65 0.00 0.00 1.82
4019 7236 0.815734 ACGACGGCAGCAAGTATACT 59.184 50.000 0.00 0.00 0.00 2.12
4020 7237 1.197910 GACGACGGCAGCAAGTATAC 58.802 55.000 0.00 0.00 0.00 1.47
4022 7239 1.153628 GGACGACGGCAGCAAGTAT 60.154 57.895 1.63 0.00 0.00 2.12
4032 7249 1.128692 GAGAAAATTGCTGGACGACGG 59.871 52.381 0.00 0.00 0.00 4.79
4035 7252 1.001520 TCGGAGAAAATTGCTGGACGA 59.998 47.619 0.00 0.00 0.00 4.20
4039 7256 4.215399 TGTTAACTCGGAGAAAATTGCTGG 59.785 41.667 12.86 0.00 34.09 4.85
4040 7257 5.356882 TGTTAACTCGGAGAAAATTGCTG 57.643 39.130 12.86 0.00 34.09 4.41
4041 7258 6.206498 GTTTGTTAACTCGGAGAAAATTGCT 58.794 36.000 12.86 0.00 34.09 3.91
4052 7269 5.515626 CCTATCTTCTCGTTTGTTAACTCGG 59.484 44.000 7.22 4.51 31.89 4.63
4065 7291 0.377554 ACGCGTGACCTATCTTCTCG 59.622 55.000 12.93 0.00 34.04 4.04
4083 7309 4.139234 GGGGCGGACTGGTACGAC 62.139 72.222 9.71 6.04 46.40 4.34
4090 7316 2.886730 AAATTAGGCGGGGCGGACTG 62.887 60.000 0.00 0.00 0.00 3.51
4091 7317 1.339644 TAAATTAGGCGGGGCGGACT 61.340 55.000 0.00 0.00 0.00 3.85
4093 7319 1.146707 GTAAATTAGGCGGGGCGGA 59.853 57.895 0.00 0.00 0.00 5.54
4095 7321 1.782028 GCTGTAAATTAGGCGGGGCG 61.782 60.000 0.00 0.00 0.00 6.13
4098 7324 1.001378 GCATGCTGTAAATTAGGCGGG 60.001 52.381 11.37 0.00 0.00 6.13
4101 7327 2.097466 ACACGCATGCTGTAAATTAGGC 59.903 45.455 17.13 0.00 0.00 3.93
4107 7333 1.804151 GGAGAACACGCATGCTGTAAA 59.196 47.619 17.13 0.00 0.00 2.01
4109 7335 0.320050 TGGAGAACACGCATGCTGTA 59.680 50.000 17.13 1.36 0.00 2.74
4111 7337 1.642037 CCTGGAGAACACGCATGCTG 61.642 60.000 17.13 14.95 0.00 4.41
4112 7338 1.376424 CCTGGAGAACACGCATGCT 60.376 57.895 17.13 0.00 0.00 3.79
4113 7339 0.955428 TTCCTGGAGAACACGCATGC 60.955 55.000 7.91 7.91 0.00 4.06
4115 7341 1.347707 TCTTTCCTGGAGAACACGCAT 59.652 47.619 0.00 0.00 32.95 4.73
4127 7360 6.889198 TCTTGGTATGAACCTATCTTTCCTG 58.111 40.000 0.00 0.00 46.91 3.86
4138 7371 8.598041 ACCATTAGATAGATCTTGGTATGAACC 58.402 37.037 11.96 0.00 43.00 3.62
4140 7373 9.159254 ACACCATTAGATAGATCTTGGTATGAA 57.841 33.333 13.00 0.00 42.96 2.57
4178 7419 1.470098 GTAGTTGCAGTTCAGGCCATG 59.530 52.381 5.01 0.00 0.00 3.66
4179 7420 1.614317 GGTAGTTGCAGTTCAGGCCAT 60.614 52.381 5.01 0.00 0.00 4.40
4180 7421 0.250727 GGTAGTTGCAGTTCAGGCCA 60.251 55.000 5.01 0.00 0.00 5.36
4181 7422 1.298859 CGGTAGTTGCAGTTCAGGCC 61.299 60.000 0.00 0.00 0.00 5.19
4182 7423 1.912371 GCGGTAGTTGCAGTTCAGGC 61.912 60.000 0.00 0.00 0.00 4.85
4183 7424 0.602638 TGCGGTAGTTGCAGTTCAGG 60.603 55.000 0.00 0.00 37.44 3.86
4184 7425 1.225855 TTGCGGTAGTTGCAGTTCAG 58.774 50.000 0.00 0.00 44.28 3.02
4185 7426 1.669604 TTTGCGGTAGTTGCAGTTCA 58.330 45.000 0.00 0.00 44.28 3.18
4247 7540 1.135689 CCCTAATAATTCGGCGCATGC 60.136 52.381 10.83 7.91 41.71 4.06
4271 7565 9.494271 CCAACTAGCAAGATGAAAGCTTATATA 57.506 33.333 0.00 0.00 43.18 0.86
4272 7566 7.040823 GCCAACTAGCAAGATGAAAGCTTATAT 60.041 37.037 0.00 0.00 43.18 0.86
4273 7567 6.260936 GCCAACTAGCAAGATGAAAGCTTATA 59.739 38.462 0.00 0.00 43.18 0.98
4274 7568 5.067023 GCCAACTAGCAAGATGAAAGCTTAT 59.933 40.000 0.00 0.00 43.18 1.73
4275 7569 4.396166 GCCAACTAGCAAGATGAAAGCTTA 59.604 41.667 0.00 0.00 43.18 3.09
4277 7571 2.751806 GCCAACTAGCAAGATGAAAGCT 59.248 45.455 0.00 0.00 42.14 3.74
4278 7572 2.159324 GGCCAACTAGCAAGATGAAAGC 60.159 50.000 0.00 0.00 0.00 3.51
4279 7573 3.084039 TGGCCAACTAGCAAGATGAAAG 58.916 45.455 0.61 0.00 0.00 2.62
4297 7591 1.750399 ACCGAGTCATTGGCATGGC 60.750 57.895 13.29 13.29 34.94 4.40
4305 7599 1.077501 CATGGGCCACCGAGTCATT 60.078 57.895 9.28 0.00 40.75 2.57
4312 7606 3.067480 GATTGCACATGGGCCACCG 62.067 63.158 19.33 5.65 40.75 4.94
4331 7625 7.310664 CAATGTGATGTATATTGGAAGGATGC 58.689 38.462 0.00 0.00 35.09 3.91
4344 7638 4.951715 ACTTGATGTGCCAATGTGATGTAT 59.048 37.500 0.00 0.00 0.00 2.29
4347 7641 3.861276 ACTTGATGTGCCAATGTGATG 57.139 42.857 0.00 0.00 0.00 3.07
4383 7690 6.436843 AATTATGACATGGTTCTTCGAACC 57.563 37.500 16.75 16.75 40.67 3.62
4388 7695 7.887996 TTTGCAAATTATGACATGGTTCTTC 57.112 32.000 8.05 0.00 0.00 2.87
4389 7696 8.851541 ATTTTGCAAATTATGACATGGTTCTT 57.148 26.923 13.65 0.00 0.00 2.52
4440 7748 1.367840 GACCCAGCGTGTCAAGACT 59.632 57.895 1.53 0.00 32.91 3.24
4541 7849 3.194116 TCAAGTAGTATCCGAAAACGCCT 59.806 43.478 0.00 0.00 0.00 5.52
4542 7850 3.514645 TCAAGTAGTATCCGAAAACGCC 58.485 45.455 0.00 0.00 0.00 5.68
4545 7853 9.235537 GACTCTAATCAAGTAGTATCCGAAAAC 57.764 37.037 0.00 0.00 0.00 2.43
4551 7859 8.453238 TCACAGACTCTAATCAAGTAGTATCC 57.547 38.462 0.00 0.00 0.00 2.59
4562 7913 6.478344 GGAATGTCACATCACAGACTCTAATC 59.522 42.308 0.00 0.00 35.81 1.75
4605 7977 5.655974 TCACCATTGCATGTATACCACAAAT 59.344 36.000 0.00 0.00 41.55 2.32
4626 8012 2.095415 GGTCAGTGGCCGTTATTTTCAC 60.095 50.000 0.00 0.00 0.00 3.18
4636 8022 0.744281 AAACAAAAGGTCAGTGGCCG 59.256 50.000 8.44 0.00 0.00 6.13
4726 8112 1.377725 CCTCCATTTCGCTGCCACT 60.378 57.895 0.00 0.00 0.00 4.00
4732 8118 1.454479 CCATGGCCTCCATTTCGCT 60.454 57.895 3.32 0.00 42.23 4.93
4779 8165 1.434513 TTGGGCAGGGAAGTGGTGAT 61.435 55.000 0.00 0.00 0.00 3.06
4782 8168 0.251787 GATTTGGGCAGGGAAGTGGT 60.252 55.000 0.00 0.00 0.00 4.16
4785 8171 2.702270 AAAGATTTGGGCAGGGAAGT 57.298 45.000 0.00 0.00 0.00 3.01
4844 8233 9.726438 ACTTCTGTAGCAACTGAATTATAAGTT 57.274 29.630 0.00 0.00 41.14 2.66
4848 8237 7.064609 GTGCACTTCTGTAGCAACTGAATTATA 59.935 37.037 10.32 0.00 41.14 0.98
4885 8274 6.566079 ATCCTGATCATCTCAACAGGTTAA 57.434 37.500 0.00 0.00 46.68 2.01
4891 8280 9.465199 TTTCAAATTATCCTGATCATCTCAACA 57.535 29.630 0.00 0.00 32.14 3.33
4893 8282 8.906867 GGTTTCAAATTATCCTGATCATCTCAA 58.093 33.333 0.00 0.00 32.14 3.02
4897 8286 8.906867 TGAAGGTTTCAAATTATCCTGATCATC 58.093 33.333 0.00 0.00 36.59 2.92
4899 8288 8.648698 TTGAAGGTTTCAAATTATCCTGATCA 57.351 30.769 0.00 0.00 45.94 2.92
4914 8303 6.765036 TCATGATATGAGAGCTTGAAGGTTTC 59.235 38.462 7.85 7.85 33.59 2.78
4918 8307 9.451002 AATAATCATGATATGAGAGCTTGAAGG 57.549 33.333 9.04 0.00 43.53 3.46
4922 8311 9.887629 AGGTAATAATCATGATATGAGAGCTTG 57.112 33.333 9.04 0.00 43.53 4.01
5244 8651 8.682128 TGATTTTGTTTGTTTCTTGTACTGAC 57.318 30.769 0.00 0.00 0.00 3.51
5280 8688 1.963515 GGGTTGATGGCTTTCTGTGTT 59.036 47.619 0.00 0.00 0.00 3.32
5359 8773 7.553334 TCAGACTTAACAGATTACACCATACC 58.447 38.462 0.00 0.00 0.00 2.73
5397 8811 3.191669 CCAGTATTGCAACATGCCATTG 58.808 45.455 0.00 0.00 44.23 2.82
5676 9099 0.038744 TTCCGAACGGAGGGAGTACT 59.961 55.000 15.34 0.00 46.06 2.73
5677 9100 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
5678 9101 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
5679 9102 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
5680 9103 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
5681 9104 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
5682 9105 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
5683 9106 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
5684 9107 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
5685 9108 3.256383 TGAGACAAGTAATTCCGAACGGA 59.744 43.478 12.04 12.04 43.52 4.69
5686 9109 3.581755 TGAGACAAGTAATTCCGAACGG 58.418 45.455 6.94 6.94 0.00 4.44
5687 9110 4.482386 TCTGAGACAAGTAATTCCGAACG 58.518 43.478 0.00 0.00 0.00 3.95
5688 9111 6.780706 TTTCTGAGACAAGTAATTCCGAAC 57.219 37.500 0.00 0.00 0.00 3.95
5689 9112 6.371548 CCATTTCTGAGACAAGTAATTCCGAA 59.628 38.462 0.00 0.00 0.00 4.30
5690 9113 5.874810 CCATTTCTGAGACAAGTAATTCCGA 59.125 40.000 0.00 0.00 0.00 4.55
5691 9114 5.874810 TCCATTTCTGAGACAAGTAATTCCG 59.125 40.000 0.00 0.00 0.00 4.30
5692 9115 7.337942 ACATCCATTTCTGAGACAAGTAATTCC 59.662 37.037 0.00 0.00 0.00 3.01
5693 9116 8.273780 ACATCCATTTCTGAGACAAGTAATTC 57.726 34.615 0.00 0.00 0.00 2.17
5694 9117 9.911788 ATACATCCATTTCTGAGACAAGTAATT 57.088 29.630 0.00 0.00 0.00 1.40
5695 9118 9.553064 GATACATCCATTTCTGAGACAAGTAAT 57.447 33.333 0.00 0.00 0.00 1.89
5696 9119 8.762645 AGATACATCCATTTCTGAGACAAGTAA 58.237 33.333 0.00 0.00 0.00 2.24
5697 9120 8.311395 AGATACATCCATTTCTGAGACAAGTA 57.689 34.615 0.00 0.00 0.00 2.24
5698 9121 7.192852 AGATACATCCATTTCTGAGACAAGT 57.807 36.000 0.00 0.00 0.00 3.16
5699 9122 8.637099 TCTAGATACATCCATTTCTGAGACAAG 58.363 37.037 0.00 0.00 0.00 3.16
5700 9123 8.539117 TCTAGATACATCCATTTCTGAGACAA 57.461 34.615 0.00 0.00 0.00 3.18
5701 9124 8.417106 GTTCTAGATACATCCATTTCTGAGACA 58.583 37.037 0.00 0.00 0.00 3.41
5702 9125 8.637986 AGTTCTAGATACATCCATTTCTGAGAC 58.362 37.037 0.00 0.00 0.00 3.36
5703 9126 8.774546 AGTTCTAGATACATCCATTTCTGAGA 57.225 34.615 0.00 0.00 0.00 3.27
5734 9157 9.900710 GTCGTAGAAATGAATGTATCTAGATGT 57.099 33.333 15.79 0.00 39.69 3.06
5735 9158 9.899226 TGTCGTAGAAATGAATGTATCTAGATG 57.101 33.333 15.79 0.00 39.69 2.90
5737 9160 9.952188 CTTGTCGTAGAAATGAATGTATCTAGA 57.048 33.333 0.00 0.00 39.69 2.43
5738 9161 9.737427 ACTTGTCGTAGAAATGAATGTATCTAG 57.263 33.333 0.00 0.00 39.69 2.43
5744 9167 8.665685 GGAATTACTTGTCGTAGAAATGAATGT 58.334 33.333 0.00 0.00 39.69 2.71
5745 9168 7.846107 CGGAATTACTTGTCGTAGAAATGAATG 59.154 37.037 0.00 0.00 39.69 2.67
5746 9169 7.762615 TCGGAATTACTTGTCGTAGAAATGAAT 59.237 33.333 0.00 0.00 39.69 2.57
5747 9170 7.092079 TCGGAATTACTTGTCGTAGAAATGAA 58.908 34.615 0.00 0.00 39.69 2.57
5748 9171 6.623486 TCGGAATTACTTGTCGTAGAAATGA 58.377 36.000 0.00 0.00 39.69 2.57
5749 9172 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
5750 9173 6.034256 CGTTCGGAATTACTTGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
5751 9174 5.343058 CGTTCGGAATTACTTGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
5752 9175 4.853196 CGTTCGGAATTACTTGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
5753 9176 4.406069 CGTTCGGAATTACTTGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
5754 9177 3.545078 CCGTTCGGAATTACTTGTCGTAG 59.455 47.826 5.19 0.00 0.00 3.51
5755 9178 3.190327 TCCGTTCGGAATTACTTGTCGTA 59.810 43.478 11.66 0.00 0.00 3.43
5756 9179 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
5757 9180 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
5758 9181 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
5759 9182 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
5760 9183 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
5761 9184 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
5762 9185 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
5763 9186 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
5764 9187 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
5765 9188 1.856629 TACTCCCTCCGTTCGGAATT 58.143 50.000 14.79 0.00 33.41 2.17
5766 9189 1.687123 CATACTCCCTCCGTTCGGAAT 59.313 52.381 14.79 2.14 33.41 3.01
5767 9190 1.108776 CATACTCCCTCCGTTCGGAA 58.891 55.000 14.79 0.00 33.41 4.30
5768 9191 0.033796 ACATACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
5769 9192 1.683943 TACATACTCCCTCCGTTCGG 58.316 55.000 4.74 4.74 0.00 4.30
5770 9193 2.882761 TCATACATACTCCCTCCGTTCG 59.117 50.000 0.00 0.00 0.00 3.95
5771 9194 4.281182 ACATCATACATACTCCCTCCGTTC 59.719 45.833 0.00 0.00 0.00 3.95
5772 9195 4.223953 ACATCATACATACTCCCTCCGTT 58.776 43.478 0.00 0.00 0.00 4.44
5773 9196 3.845860 ACATCATACATACTCCCTCCGT 58.154 45.455 0.00 0.00 0.00 4.69
5774 9197 5.977489 TTACATCATACATACTCCCTCCG 57.023 43.478 0.00 0.00 0.00 4.63
5778 9201 9.871238 ACGATAAATTACATCATACATACTCCC 57.129 33.333 0.00 0.00 0.00 4.30
5850 9277 7.179516 TCTCCTGGTTAGTCATTGTAACACATA 59.820 37.037 0.00 0.00 32.85 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.