Multiple sequence alignment - TraesCS2B01G155900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G155900 chr2B 100.000 3805 0 0 1 3805 126126338 126122534 0.000000e+00 7027.0
1 TraesCS2B01G155900 chr2B 98.779 2375 29 0 1431 3805 615909333 615911707 0.000000e+00 4226.0
2 TraesCS2B01G155900 chr2B 97.481 675 16 1 1 674 769061033 769060359 0.000000e+00 1151.0
3 TraesCS2B01G155900 chr2B 100.000 29 0 0 239 267 251037702 251037674 2.000000e-03 54.7
4 TraesCS2B01G155900 chr7A 98.737 2376 29 1 1431 3805 574109065 574106690 0.000000e+00 4220.0
5 TraesCS2B01G155900 chr7A 98.529 1904 27 1 1903 3805 424300200 424302103 0.000000e+00 3360.0
6 TraesCS2B01G155900 chr7A 87.915 422 30 6 1009 1430 1242519 1242119 9.560000e-131 477.0
7 TraesCS2B01G155900 chr7A 91.909 309 23 2 672 979 1242923 1242616 7.550000e-117 431.0
8 TraesCS2B01G155900 chr7A 85.106 188 25 3 486 671 235453672 235453486 5.020000e-44 189.0
9 TraesCS2B01G155900 chr1A 98.695 2376 30 1 1430 3805 509653871 509656245 0.000000e+00 4215.0
10 TraesCS2B01G155900 chr4A 98.654 2377 32 0 1429 3805 630786664 630784288 0.000000e+00 4213.0
11 TraesCS2B01G155900 chr4B 98.651 2373 31 1 1434 3805 27257716 27260088 0.000000e+00 4204.0
12 TraesCS2B01G155900 chr4B 98.113 2332 43 1 1430 3760 94824403 94822072 0.000000e+00 4061.0
13 TraesCS2B01G155900 chr4B 75.090 277 34 21 35 293 122849124 122849383 3.130000e-16 97.1
14 TraesCS2B01G155900 chr1B 98.526 2375 35 0 1431 3805 361813509 361811135 0.000000e+00 4193.0
15 TraesCS2B01G155900 chr1B 79.600 750 71 28 1 672 56874070 56874815 2.680000e-126 462.0
16 TraesCS2B01G155900 chr6A 97.935 2373 37 4 1434 3805 229787061 229784700 0.000000e+00 4100.0
17 TraesCS2B01G155900 chr3A 89.474 760 57 9 672 1430 21107273 21108010 0.000000e+00 939.0
18 TraesCS2B01G155900 chr3A 96.566 495 16 1 1431 1924 154925684 154926178 0.000000e+00 819.0
19 TraesCS2B01G155900 chr3A 84.865 185 24 4 486 668 536862906 536863088 2.330000e-42 183.0
20 TraesCS2B01G155900 chr3A 83.799 179 27 2 491 668 697247366 697247543 6.540000e-38 169.0
21 TraesCS2B01G155900 chr3A 83.240 179 28 2 491 668 559867000 559867177 3.040000e-36 163.0
22 TraesCS2B01G155900 chr7B 81.543 726 73 20 1 669 6916296 6915575 3.340000e-150 542.0
23 TraesCS2B01G155900 chrUn 87.915 422 30 6 1009 1430 416784426 416784826 9.560000e-131 477.0
24 TraesCS2B01G155900 chr3B 78.273 741 87 29 1 669 473573697 473572959 3.540000e-110 409.0
25 TraesCS2B01G155900 chr6D 76.326 773 126 46 666 1410 458111063 458111806 1.000000e-95 361.0
26 TraesCS2B01G155900 chr6B 76.246 682 81 47 51 671 35700039 35699378 1.730000e-73 287.0
27 TraesCS2B01G155900 chr5D 80.336 417 39 23 92 470 482755460 482755871 3.740000e-70 276.0
28 TraesCS2B01G155900 chr2D 77.470 506 78 28 925 1410 577539969 577540458 1.740000e-68 270.0
29 TraesCS2B01G155900 chr1D 77.075 506 80 28 925 1410 56876708 56877197 3.770000e-65 259.0
30 TraesCS2B01G155900 chr5B 74.854 684 98 37 44 668 234758749 234758081 3.800000e-60 243.0
31 TraesCS2B01G155900 chr3D 82.353 170 27 3 496 662 556003906 556003737 1.100000e-30 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G155900 chr2B 126122534 126126338 3804 True 7027 7027 100.000 1 3805 1 chr2B.!!$R1 3804
1 TraesCS2B01G155900 chr2B 615909333 615911707 2374 False 4226 4226 98.779 1431 3805 1 chr2B.!!$F1 2374
2 TraesCS2B01G155900 chr2B 769060359 769061033 674 True 1151 1151 97.481 1 674 1 chr2B.!!$R3 673
3 TraesCS2B01G155900 chr7A 574106690 574109065 2375 True 4220 4220 98.737 1431 3805 1 chr7A.!!$R2 2374
4 TraesCS2B01G155900 chr7A 424300200 424302103 1903 False 3360 3360 98.529 1903 3805 1 chr7A.!!$F1 1902
5 TraesCS2B01G155900 chr7A 1242119 1242923 804 True 454 477 89.912 672 1430 2 chr7A.!!$R3 758
6 TraesCS2B01G155900 chr1A 509653871 509656245 2374 False 4215 4215 98.695 1430 3805 1 chr1A.!!$F1 2375
7 TraesCS2B01G155900 chr4A 630784288 630786664 2376 True 4213 4213 98.654 1429 3805 1 chr4A.!!$R1 2376
8 TraesCS2B01G155900 chr4B 27257716 27260088 2372 False 4204 4204 98.651 1434 3805 1 chr4B.!!$F1 2371
9 TraesCS2B01G155900 chr4B 94822072 94824403 2331 True 4061 4061 98.113 1430 3760 1 chr4B.!!$R1 2330
10 TraesCS2B01G155900 chr1B 361811135 361813509 2374 True 4193 4193 98.526 1431 3805 1 chr1B.!!$R1 2374
11 TraesCS2B01G155900 chr1B 56874070 56874815 745 False 462 462 79.600 1 672 1 chr1B.!!$F1 671
12 TraesCS2B01G155900 chr6A 229784700 229787061 2361 True 4100 4100 97.935 1434 3805 1 chr6A.!!$R1 2371
13 TraesCS2B01G155900 chr3A 21107273 21108010 737 False 939 939 89.474 672 1430 1 chr3A.!!$F1 758
14 TraesCS2B01G155900 chr7B 6915575 6916296 721 True 542 542 81.543 1 669 1 chr7B.!!$R1 668
15 TraesCS2B01G155900 chr3B 473572959 473573697 738 True 409 409 78.273 1 669 1 chr3B.!!$R1 668
16 TraesCS2B01G155900 chr6D 458111063 458111806 743 False 361 361 76.326 666 1410 1 chr6D.!!$F1 744
17 TraesCS2B01G155900 chr6B 35699378 35700039 661 True 287 287 76.246 51 671 1 chr6B.!!$R1 620
18 TraesCS2B01G155900 chr5B 234758081 234758749 668 True 243 243 74.854 44 668 1 chr5B.!!$R1 624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
439 451 0.033920 GGGGCAGTTTTCCTTGCTTG 59.966 55.000 0.00 0.0 40.15 4.01 F
1243 1338 0.111253 CCCTTCCATATCCAGGTGCC 59.889 60.000 0.00 0.0 0.00 5.01 F
1830 2096 1.820906 GCAGATGGCGCTGATTCCA 60.821 57.895 7.64 0.0 38.14 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1342 1438 1.210204 ACCCAGCACATGAGGGATGT 61.210 55.0 19.13 0.00 46.98 3.06 R
2677 2943 0.110192 CTTTCGCTTTCGTTCCTGCC 60.110 55.0 0.00 0.00 36.96 4.85 R
3131 3398 0.394192 TGCATCGATGGAGGATGACC 59.606 55.0 26.00 7.18 43.07 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 0.813184 CAATGATGTGGTGGTGGAGC 59.187 55.000 0.00 0.00 0.00 4.70
37 48 1.486310 GATGTGGTGGTGGAGCAGATA 59.514 52.381 0.00 0.00 36.25 1.98
43 54 2.324541 GTGGTGGAGCAGATAGGATCT 58.675 52.381 0.00 0.00 41.15 2.75
48 59 3.057174 GTGGAGCAGATAGGATCTAACCG 60.057 52.174 0.00 0.00 37.58 4.44
101 113 1.696884 TGTGTGTGGCATGAAGACCTA 59.303 47.619 0.00 0.00 0.00 3.08
156 168 2.417936 GGGGAACGCGGATCTCTC 59.582 66.667 12.47 0.53 0.00 3.20
157 169 2.417936 GGGAACGCGGATCTCTCC 59.582 66.667 12.47 6.08 38.29 3.71
166 178 3.597550 GGATCTCTCCGGCTTAAGC 57.402 57.895 19.53 19.53 41.14 3.09
167 179 0.319125 GGATCTCTCCGGCTTAAGCG 60.319 60.000 20.80 15.31 43.26 4.68
168 180 0.941936 GATCTCTCCGGCTTAAGCGC 60.942 60.000 20.80 12.75 43.26 5.92
169 181 1.395826 ATCTCTCCGGCTTAAGCGCT 61.396 55.000 20.80 2.64 43.26 5.92
170 182 0.750546 TCTCTCCGGCTTAAGCGCTA 60.751 55.000 20.80 7.62 43.26 4.26
171 183 0.595310 CTCTCCGGCTTAAGCGCTAC 60.595 60.000 20.80 6.38 43.26 3.58
172 184 1.944676 CTCCGGCTTAAGCGCTACG 60.945 63.158 20.80 17.32 43.26 3.51
173 185 2.103538 CCGGCTTAAGCGCTACGA 59.896 61.111 20.80 0.00 43.26 3.43
174 186 2.228914 CCGGCTTAAGCGCTACGAC 61.229 63.158 20.80 2.81 43.26 4.34
175 187 2.565394 CGGCTTAAGCGCTACGACG 61.565 63.158 20.80 12.77 43.26 5.12
176 188 2.228914 GGCTTAAGCGCTACGACGG 61.229 63.158 20.80 0.00 43.26 4.79
177 189 2.857415 GCTTAAGCGCTACGACGGC 61.857 63.158 12.05 6.14 0.00 5.68
195 207 3.294493 GGCGGCACACCACATGTT 61.294 61.111 3.07 0.00 40.64 2.71
196 208 2.255252 GCGGCACACCACATGTTC 59.745 61.111 0.00 0.00 40.64 3.18
197 209 2.551006 GCGGCACACCACATGTTCA 61.551 57.895 0.00 0.00 40.64 3.18
198 210 1.865788 GCGGCACACCACATGTTCAT 61.866 55.000 0.00 0.00 40.64 2.57
199 211 0.597568 CGGCACACCACATGTTCATT 59.402 50.000 0.00 0.00 40.64 2.57
200 212 1.666599 CGGCACACCACATGTTCATTG 60.667 52.381 0.00 0.00 40.64 2.82
201 213 1.337074 GGCACACCACATGTTCATTGG 60.337 52.381 0.00 0.00 40.64 3.16
202 214 1.340889 GCACACCACATGTTCATTGGT 59.659 47.619 0.00 0.00 44.83 3.67
206 218 1.631405 CCACATGTTCATTGGTGGGT 58.369 50.000 0.00 0.00 45.48 4.51
207 219 2.801483 CCACATGTTCATTGGTGGGTA 58.199 47.619 0.00 0.00 45.48 3.69
208 220 2.754552 CCACATGTTCATTGGTGGGTAG 59.245 50.000 0.00 0.00 45.48 3.18
209 221 3.561097 CCACATGTTCATTGGTGGGTAGA 60.561 47.826 0.00 0.00 45.48 2.59
210 222 3.691118 CACATGTTCATTGGTGGGTAGAG 59.309 47.826 0.00 0.00 0.00 2.43
211 223 3.587061 ACATGTTCATTGGTGGGTAGAGA 59.413 43.478 0.00 0.00 0.00 3.10
212 224 3.981071 TGTTCATTGGTGGGTAGAGAG 57.019 47.619 0.00 0.00 0.00 3.20
213 225 3.516586 TGTTCATTGGTGGGTAGAGAGA 58.483 45.455 0.00 0.00 0.00 3.10
214 226 3.907474 TGTTCATTGGTGGGTAGAGAGAA 59.093 43.478 0.00 0.00 0.00 2.87
215 227 4.020218 TGTTCATTGGTGGGTAGAGAGAAG 60.020 45.833 0.00 0.00 0.00 2.85
216 228 3.107601 TCATTGGTGGGTAGAGAGAAGG 58.892 50.000 0.00 0.00 0.00 3.46
217 229 3.107601 CATTGGTGGGTAGAGAGAAGGA 58.892 50.000 0.00 0.00 0.00 3.36
218 230 3.491766 TTGGTGGGTAGAGAGAAGGAT 57.508 47.619 0.00 0.00 0.00 3.24
219 231 4.620086 TTGGTGGGTAGAGAGAAGGATA 57.380 45.455 0.00 0.00 0.00 2.59
220 232 4.186077 TGGTGGGTAGAGAGAAGGATAG 57.814 50.000 0.00 0.00 0.00 2.08
221 233 3.792114 TGGTGGGTAGAGAGAAGGATAGA 59.208 47.826 0.00 0.00 0.00 1.98
222 234 4.420552 TGGTGGGTAGAGAGAAGGATAGAT 59.579 45.833 0.00 0.00 0.00 1.98
223 235 5.615692 TGGTGGGTAGAGAGAAGGATAGATA 59.384 44.000 0.00 0.00 0.00 1.98
224 236 6.184789 GGTGGGTAGAGAGAAGGATAGATAG 58.815 48.000 0.00 0.00 0.00 2.08
225 237 6.184789 GTGGGTAGAGAGAAGGATAGATAGG 58.815 48.000 0.00 0.00 0.00 2.57
226 238 5.254267 TGGGTAGAGAGAAGGATAGATAGGG 59.746 48.000 0.00 0.00 0.00 3.53
227 239 5.340528 GGGTAGAGAGAAGGATAGATAGGGG 60.341 52.000 0.00 0.00 0.00 4.79
228 240 5.493250 GGTAGAGAGAAGGATAGATAGGGGA 59.507 48.000 0.00 0.00 0.00 4.81
229 241 5.796502 AGAGAGAAGGATAGATAGGGGAG 57.203 47.826 0.00 0.00 0.00 4.30
230 242 4.544152 AGAGAGAAGGATAGATAGGGGAGG 59.456 50.000 0.00 0.00 0.00 4.30
231 243 4.528354 AGAGAAGGATAGATAGGGGAGGA 58.472 47.826 0.00 0.00 0.00 3.71
232 244 4.544152 AGAGAAGGATAGATAGGGGAGGAG 59.456 50.000 0.00 0.00 0.00 3.69
233 245 3.600617 AGAAGGATAGATAGGGGAGGAGG 59.399 52.174 0.00 0.00 0.00 4.30
234 246 3.041195 AGGATAGATAGGGGAGGAGGT 57.959 52.381 0.00 0.00 0.00 3.85
235 247 2.930405 AGGATAGATAGGGGAGGAGGTC 59.070 54.545 0.00 0.00 0.00 3.85
236 248 2.023791 GGATAGATAGGGGAGGAGGTCC 60.024 59.091 0.00 0.00 46.10 4.46
243 255 3.300013 GGAGGAGGTCCCGTCAAG 58.700 66.667 0.00 0.00 39.88 3.02
244 256 2.359967 GGAGGAGGTCCCGTCAAGG 61.360 68.421 0.00 0.00 39.88 3.61
245 257 1.305046 GAGGAGGTCCCGTCAAGGA 60.305 63.158 0.00 0.00 45.00 3.36
246 258 1.305381 AGGAGGTCCCGTCAAGGAG 60.305 63.158 0.00 0.00 45.00 3.69
247 259 2.359967 GGAGGTCCCGTCAAGGAGG 61.360 68.421 0.00 0.00 45.00 4.30
248 260 1.305046 GAGGTCCCGTCAAGGAGGA 60.305 63.158 0.00 0.00 45.00 3.71
249 261 1.305381 AGGTCCCGTCAAGGAGGAG 60.305 63.158 0.00 0.00 45.00 3.69
250 262 1.305046 GGTCCCGTCAAGGAGGAGA 60.305 63.158 0.00 0.00 45.00 3.71
251 263 1.324005 GGTCCCGTCAAGGAGGAGAG 61.324 65.000 0.00 0.00 45.00 3.20
252 264 1.682684 TCCCGTCAAGGAGGAGAGC 60.683 63.158 0.00 0.00 45.00 4.09
253 265 2.492090 CCGTCAAGGAGGAGAGCG 59.508 66.667 0.00 0.00 45.00 5.03
254 266 2.202676 CGTCAAGGAGGAGAGCGC 60.203 66.667 0.00 0.00 0.00 5.92
255 267 2.185608 GTCAAGGAGGAGAGCGCC 59.814 66.667 2.29 0.00 0.00 6.53
256 268 3.077556 TCAAGGAGGAGAGCGCCC 61.078 66.667 2.29 0.00 0.00 6.13
257 269 3.393970 CAAGGAGGAGAGCGCCCA 61.394 66.667 2.29 0.00 0.00 5.36
258 270 3.080121 AAGGAGGAGAGCGCCCAG 61.080 66.667 2.29 0.00 0.00 4.45
285 297 4.736896 GCCACACCCCGTCGTCTC 62.737 72.222 0.00 0.00 0.00 3.36
286 298 4.065281 CCACACCCCGTCGTCTCC 62.065 72.222 0.00 0.00 0.00 3.71
287 299 4.415332 CACACCCCGTCGTCTCCG 62.415 72.222 0.00 0.00 0.00 4.63
293 305 4.225340 CCGTCGTCTCCGCGAGAG 62.225 72.222 8.23 13.20 39.53 3.20
307 319 2.226602 CGAGAGCTTAAGTAAGGGGC 57.773 55.000 4.02 0.00 33.95 5.80
308 320 1.536284 CGAGAGCTTAAGTAAGGGGCG 60.536 57.143 4.02 0.00 33.95 6.13
309 321 0.831307 AGAGCTTAAGTAAGGGGCGG 59.169 55.000 4.02 0.00 33.95 6.13
310 322 0.814410 GAGCTTAAGTAAGGGGCGGC 60.814 60.000 0.00 0.00 33.95 6.53
311 323 2.178235 GCTTAAGTAAGGGGCGGCG 61.178 63.158 0.51 0.51 33.95 6.46
312 324 1.518774 CTTAAGTAAGGGGCGGCGA 59.481 57.895 12.98 0.00 0.00 5.54
313 325 0.808847 CTTAAGTAAGGGGCGGCGAC 60.809 60.000 12.98 8.16 0.00 5.19
314 326 1.543065 TTAAGTAAGGGGCGGCGACA 61.543 55.000 17.61 0.00 0.00 4.35
315 327 1.332144 TAAGTAAGGGGCGGCGACAT 61.332 55.000 17.61 1.88 0.00 3.06
316 328 1.332144 AAGTAAGGGGCGGCGACATA 61.332 55.000 17.61 0.68 0.00 2.29
317 329 1.144496 GTAAGGGGCGGCGACATAA 59.856 57.895 17.61 0.00 0.00 1.90
318 330 0.250166 GTAAGGGGCGGCGACATAAT 60.250 55.000 17.61 0.00 0.00 1.28
319 331 1.001181 GTAAGGGGCGGCGACATAATA 59.999 52.381 17.61 0.00 0.00 0.98
320 332 0.470766 AAGGGGCGGCGACATAATAA 59.529 50.000 17.61 0.00 0.00 1.40
321 333 0.250166 AGGGGCGGCGACATAATAAC 60.250 55.000 17.61 0.00 0.00 1.89
322 334 1.232621 GGGGCGGCGACATAATAACC 61.233 60.000 17.61 0.00 0.00 2.85
323 335 0.533308 GGGCGGCGACATAATAACCA 60.533 55.000 17.61 0.00 0.00 3.67
324 336 0.865769 GGCGGCGACATAATAACCAG 59.134 55.000 12.98 0.00 0.00 4.00
325 337 1.539496 GGCGGCGACATAATAACCAGA 60.539 52.381 12.98 0.00 0.00 3.86
326 338 2.413837 GCGGCGACATAATAACCAGAT 58.586 47.619 12.98 0.00 0.00 2.90
327 339 2.157668 GCGGCGACATAATAACCAGATG 59.842 50.000 12.98 0.00 0.00 2.90
328 340 2.157668 CGGCGACATAATAACCAGATGC 59.842 50.000 0.00 0.00 0.00 3.91
329 341 2.157668 GGCGACATAATAACCAGATGCG 59.842 50.000 0.00 0.00 0.00 4.73
330 342 2.411547 GCGACATAATAACCAGATGCGC 60.412 50.000 0.00 0.00 38.19 6.09
331 343 2.157668 CGACATAATAACCAGATGCGCC 59.842 50.000 4.18 0.00 0.00 6.53
332 344 2.143122 ACATAATAACCAGATGCGCCG 58.857 47.619 4.18 0.00 0.00 6.46
333 345 1.135972 CATAATAACCAGATGCGCCGC 60.136 52.381 4.18 0.00 0.00 6.53
334 346 0.882927 TAATAACCAGATGCGCCGCC 60.883 55.000 6.63 0.00 0.00 6.13
345 357 4.012895 CGCCGCCGGATTGCATAC 62.013 66.667 7.68 0.00 0.00 2.39
346 358 2.591715 GCCGCCGGATTGCATACT 60.592 61.111 7.68 0.00 0.00 2.12
347 359 2.607892 GCCGCCGGATTGCATACTC 61.608 63.158 7.68 0.00 0.00 2.59
348 360 1.069765 CCGCCGGATTGCATACTCT 59.930 57.895 5.05 0.00 0.00 3.24
349 361 0.946221 CCGCCGGATTGCATACTCTC 60.946 60.000 5.05 0.00 0.00 3.20
350 362 0.946221 CGCCGGATTGCATACTCTCC 60.946 60.000 5.05 0.00 0.00 3.71
351 363 0.394565 GCCGGATTGCATACTCTCCT 59.605 55.000 5.05 0.00 0.00 3.69
352 364 1.202698 GCCGGATTGCATACTCTCCTT 60.203 52.381 5.05 0.00 0.00 3.36
353 365 2.760374 CCGGATTGCATACTCTCCTTC 58.240 52.381 0.00 0.00 0.00 3.46
354 366 2.366916 CCGGATTGCATACTCTCCTTCT 59.633 50.000 0.00 0.00 0.00 2.85
355 367 3.553922 CCGGATTGCATACTCTCCTTCTC 60.554 52.174 0.00 0.00 0.00 2.87
356 368 3.553922 CGGATTGCATACTCTCCTTCTCC 60.554 52.174 0.00 0.00 0.00 3.71
357 369 3.244387 GGATTGCATACTCTCCTTCTCCC 60.244 52.174 0.00 0.00 0.00 4.30
358 370 2.856760 TGCATACTCTCCTTCTCCCT 57.143 50.000 0.00 0.00 0.00 4.20
359 371 3.121929 TGCATACTCTCCTTCTCCCTT 57.878 47.619 0.00 0.00 0.00 3.95
360 372 3.034635 TGCATACTCTCCTTCTCCCTTC 58.965 50.000 0.00 0.00 0.00 3.46
361 373 2.367241 GCATACTCTCCTTCTCCCTTCC 59.633 54.545 0.00 0.00 0.00 3.46
362 374 2.850695 TACTCTCCTTCTCCCTTCCC 57.149 55.000 0.00 0.00 0.00 3.97
363 375 0.324830 ACTCTCCTTCTCCCTTCCCG 60.325 60.000 0.00 0.00 0.00 5.14
364 376 0.324830 CTCTCCTTCTCCCTTCCCGT 60.325 60.000 0.00 0.00 0.00 5.28
365 377 0.116541 TCTCCTTCTCCCTTCCCGTT 59.883 55.000 0.00 0.00 0.00 4.44
366 378 0.537653 CTCCTTCTCCCTTCCCGTTC 59.462 60.000 0.00 0.00 0.00 3.95
367 379 1.218316 CCTTCTCCCTTCCCGTTCG 59.782 63.158 0.00 0.00 0.00 3.95
368 380 1.218316 CTTCTCCCTTCCCGTTCGG 59.782 63.158 4.08 4.08 0.00 4.30
369 381 2.854187 CTTCTCCCTTCCCGTTCGGC 62.854 65.000 5.66 0.00 0.00 5.54
370 382 4.814294 CTCCCTTCCCGTTCGGCG 62.814 72.222 0.00 0.00 40.95 6.46
396 408 4.874521 TGGGACAGACTGGGAGAG 57.125 61.111 7.51 0.00 0.00 3.20
397 409 2.173852 TGGGACAGACTGGGAGAGA 58.826 57.895 7.51 0.00 0.00 3.10
398 410 0.040351 TGGGACAGACTGGGAGAGAG 59.960 60.000 7.51 0.00 0.00 3.20
399 411 0.333312 GGGACAGACTGGGAGAGAGA 59.667 60.000 7.51 0.00 0.00 3.10
400 412 1.063266 GGGACAGACTGGGAGAGAGAT 60.063 57.143 7.51 0.00 0.00 2.75
401 413 2.031120 GGACAGACTGGGAGAGAGATG 58.969 57.143 7.51 0.00 0.00 2.90
402 414 1.408702 GACAGACTGGGAGAGAGATGC 59.591 57.143 7.51 0.00 0.00 3.91
403 415 0.385029 CAGACTGGGAGAGAGATGCG 59.615 60.000 0.00 0.00 0.00 4.73
404 416 0.754957 AGACTGGGAGAGAGATGCGG 60.755 60.000 0.00 0.00 0.00 5.69
405 417 1.743321 GACTGGGAGAGAGATGCGGG 61.743 65.000 0.00 0.00 0.00 6.13
406 418 2.444706 TGGGAGAGAGATGCGGGG 60.445 66.667 0.00 0.00 0.00 5.73
407 419 2.444895 GGGAGAGAGATGCGGGGT 60.445 66.667 0.00 0.00 0.00 4.95
408 420 2.801631 GGGAGAGAGATGCGGGGTG 61.802 68.421 0.00 0.00 0.00 4.61
409 421 2.801631 GGAGAGAGATGCGGGGTGG 61.802 68.421 0.00 0.00 0.00 4.61
410 422 2.765807 AGAGAGATGCGGGGTGGG 60.766 66.667 0.00 0.00 0.00 4.61
411 423 3.866582 GAGAGATGCGGGGTGGGG 61.867 72.222 0.00 0.00 0.00 4.96
429 441 2.941583 GAGGGGAGGGGGCAGTTT 60.942 66.667 0.00 0.00 0.00 2.66
430 442 2.454511 AGGGGAGGGGGCAGTTTT 60.455 61.111 0.00 0.00 0.00 2.43
431 443 2.037367 GGGGAGGGGGCAGTTTTC 59.963 66.667 0.00 0.00 0.00 2.29
432 444 2.037367 GGGAGGGGGCAGTTTTCC 59.963 66.667 0.00 0.00 0.00 3.13
433 445 2.548547 GGGAGGGGGCAGTTTTCCT 61.549 63.158 0.00 0.00 0.00 3.36
434 446 1.465172 GGAGGGGGCAGTTTTCCTT 59.535 57.895 0.00 0.00 0.00 3.36
435 447 0.900182 GGAGGGGGCAGTTTTCCTTG 60.900 60.000 0.00 0.00 0.00 3.61
436 448 1.533994 AGGGGGCAGTTTTCCTTGC 60.534 57.895 0.00 0.00 39.56 4.01
437 449 1.533994 GGGGGCAGTTTTCCTTGCT 60.534 57.895 0.00 0.00 40.15 3.91
438 450 1.121407 GGGGGCAGTTTTCCTTGCTT 61.121 55.000 0.00 0.00 40.15 3.91
439 451 0.033920 GGGGCAGTTTTCCTTGCTTG 59.966 55.000 0.00 0.00 40.15 4.01
440 452 0.033920 GGGCAGTTTTCCTTGCTTGG 59.966 55.000 0.00 0.00 40.15 3.61
441 453 0.752658 GGCAGTTTTCCTTGCTTGGT 59.247 50.000 0.00 0.00 40.15 3.67
442 454 1.138859 GGCAGTTTTCCTTGCTTGGTT 59.861 47.619 0.00 0.00 40.15 3.67
443 455 2.204237 GCAGTTTTCCTTGCTTGGTTG 58.796 47.619 0.00 0.00 37.35 3.77
444 456 2.204237 CAGTTTTCCTTGCTTGGTTGC 58.796 47.619 0.00 0.00 0.00 4.17
445 457 1.202405 AGTTTTCCTTGCTTGGTTGCG 60.202 47.619 0.00 0.00 35.36 4.85
446 458 0.820871 TTTTCCTTGCTTGGTTGCGT 59.179 45.000 0.00 0.00 35.36 5.24
447 459 0.820871 TTTCCTTGCTTGGTTGCGTT 59.179 45.000 0.00 0.00 35.36 4.84
448 460 0.820871 TTCCTTGCTTGGTTGCGTTT 59.179 45.000 0.00 0.00 35.36 3.60
449 461 0.820871 TCCTTGCTTGGTTGCGTTTT 59.179 45.000 0.00 0.00 35.36 2.43
450 462 1.205893 TCCTTGCTTGGTTGCGTTTTT 59.794 42.857 0.00 0.00 35.36 1.94
451 463 1.592543 CCTTGCTTGGTTGCGTTTTTC 59.407 47.619 0.00 0.00 35.36 2.29
452 464 2.539476 CTTGCTTGGTTGCGTTTTTCT 58.461 42.857 0.00 0.00 35.36 2.52
453 465 2.202295 TGCTTGGTTGCGTTTTTCTC 57.798 45.000 0.00 0.00 35.36 2.87
454 466 1.120437 GCTTGGTTGCGTTTTTCTCG 58.880 50.000 0.00 0.00 0.00 4.04
455 467 1.268335 GCTTGGTTGCGTTTTTCTCGA 60.268 47.619 0.00 0.00 0.00 4.04
456 468 2.639751 CTTGGTTGCGTTTTTCTCGAG 58.360 47.619 5.93 5.93 0.00 4.04
457 469 0.941542 TGGTTGCGTTTTTCTCGAGG 59.058 50.000 13.56 0.00 0.00 4.63
458 470 0.237498 GGTTGCGTTTTTCTCGAGGG 59.763 55.000 13.56 0.00 0.00 4.30
459 471 0.237498 GTTGCGTTTTTCTCGAGGGG 59.763 55.000 13.56 0.00 0.00 4.79
460 472 0.179040 TTGCGTTTTTCTCGAGGGGT 60.179 50.000 13.56 0.00 0.00 4.95
461 473 0.601841 TGCGTTTTTCTCGAGGGGTC 60.602 55.000 13.56 0.00 0.00 4.46
462 474 1.296755 GCGTTTTTCTCGAGGGGTCC 61.297 60.000 13.56 0.00 0.00 4.46
463 475 0.320697 CGTTTTTCTCGAGGGGTCCT 59.679 55.000 13.56 0.00 36.03 3.85
464 476 1.672145 CGTTTTTCTCGAGGGGTCCTC 60.672 57.143 13.56 3.96 46.44 3.71
471 483 2.364448 GAGGGGTCCTCGGCTCTT 60.364 66.667 0.00 0.00 41.08 2.85
472 484 2.364448 AGGGGTCCTCGGCTCTTC 60.364 66.667 0.00 0.00 0.00 2.87
473 485 3.839432 GGGGTCCTCGGCTCTTCG 61.839 72.222 0.00 0.00 0.00 3.79
474 486 4.516195 GGGTCCTCGGCTCTTCGC 62.516 72.222 0.00 0.00 38.13 4.70
475 487 3.453679 GGTCCTCGGCTCTTCGCT 61.454 66.667 0.00 0.00 39.13 4.93
476 488 2.574399 GTCCTCGGCTCTTCGCTT 59.426 61.111 0.00 0.00 39.13 4.68
477 489 1.517475 GTCCTCGGCTCTTCGCTTC 60.517 63.158 0.00 0.00 39.13 3.86
478 490 2.202810 CCTCGGCTCTTCGCTTCC 60.203 66.667 0.00 0.00 39.13 3.46
479 491 2.580867 CTCGGCTCTTCGCTTCCG 60.581 66.667 0.00 0.00 42.96 4.30
480 492 4.129737 TCGGCTCTTCGCTTCCGG 62.130 66.667 0.00 0.00 41.98 5.14
484 496 4.082523 CTCTTCGCTTCCGGCCCA 62.083 66.667 0.00 0.00 37.74 5.36
485 497 4.388499 TCTTCGCTTCCGGCCCAC 62.388 66.667 0.00 0.00 37.74 4.61
497 509 3.219198 GCCCACGATGGCCCAATC 61.219 66.667 0.00 0.00 46.11 2.67
498 510 2.275089 CCCACGATGGCCCAATCA 59.725 61.111 0.00 0.00 35.79 2.57
499 511 1.379710 CCCACGATGGCCCAATCAA 60.380 57.895 0.00 0.00 35.79 2.57
500 512 1.666209 CCCACGATGGCCCAATCAAC 61.666 60.000 0.00 0.00 35.79 3.18
501 513 1.666209 CCACGATGGCCCAATCAACC 61.666 60.000 0.00 0.00 0.00 3.77
502 514 0.964860 CACGATGGCCCAATCAACCA 60.965 55.000 0.00 0.00 37.99 3.67
503 515 0.680921 ACGATGGCCCAATCAACCAG 60.681 55.000 0.00 0.00 36.78 4.00
504 516 1.386525 CGATGGCCCAATCAACCAGG 61.387 60.000 0.00 0.00 36.78 4.45
505 517 1.679559 GATGGCCCAATCAACCAGGC 61.680 60.000 0.00 0.00 44.99 4.85
506 518 3.451894 GGCCCAATCAACCAGGCG 61.452 66.667 0.00 0.00 46.75 5.52
507 519 3.451894 GCCCAATCAACCAGGCGG 61.452 66.667 0.00 0.00 35.30 6.13
508 520 3.451894 CCCAATCAACCAGGCGGC 61.452 66.667 0.00 0.00 34.57 6.53
509 521 3.814268 CCAATCAACCAGGCGGCG 61.814 66.667 0.51 0.51 34.57 6.46
510 522 4.481112 CAATCAACCAGGCGGCGC 62.481 66.667 26.17 26.17 34.57 6.53
526 538 2.566010 GCCAATTTTGCCGCGAGA 59.434 55.556 8.23 0.00 0.00 4.04
527 539 1.514873 GCCAATTTTGCCGCGAGAG 60.515 57.895 8.23 0.00 0.00 3.20
540 552 4.400961 GAGAGCAGCTGCCCGGTT 62.401 66.667 34.39 16.62 43.38 4.44
541 553 4.400961 AGAGCAGCTGCCCGGTTC 62.401 66.667 34.39 24.03 43.38 3.62
542 554 4.704833 GAGCAGCTGCCCGGTTCA 62.705 66.667 34.39 0.00 43.38 3.18
543 555 4.711949 AGCAGCTGCCCGGTTCAG 62.712 66.667 34.39 14.59 43.38 3.02
545 557 2.743928 CAGCTGCCCGGTTCAGTC 60.744 66.667 18.51 12.43 34.21 3.51
546 558 4.379243 AGCTGCCCGGTTCAGTCG 62.379 66.667 18.51 0.00 34.21 4.18
552 564 4.367023 CCGGTTCAGTCGCGGGAA 62.367 66.667 6.13 5.41 0.00 3.97
553 565 2.809601 CGGTTCAGTCGCGGGAAG 60.810 66.667 6.13 0.00 0.00 3.46
554 566 2.342648 GGTTCAGTCGCGGGAAGT 59.657 61.111 6.13 0.00 0.00 3.01
555 567 2.027625 GGTTCAGTCGCGGGAAGTG 61.028 63.158 6.13 5.21 0.00 3.16
556 568 1.300697 GTTCAGTCGCGGGAAGTGT 60.301 57.895 6.13 0.00 0.00 3.55
557 569 1.006571 TTCAGTCGCGGGAAGTGTC 60.007 57.895 6.13 0.00 0.00 3.67
558 570 2.742710 TTCAGTCGCGGGAAGTGTCG 62.743 60.000 6.13 0.00 0.00 4.35
565 577 2.028484 GGGAAGTGTCGCGTGTGA 59.972 61.111 5.77 0.00 0.00 3.58
566 578 1.374252 GGGAAGTGTCGCGTGTGAT 60.374 57.895 5.77 0.00 0.00 3.06
567 579 0.949105 GGGAAGTGTCGCGTGTGATT 60.949 55.000 5.77 0.00 0.00 2.57
568 580 0.865769 GGAAGTGTCGCGTGTGATTT 59.134 50.000 5.77 0.00 0.00 2.17
569 581 1.263217 GGAAGTGTCGCGTGTGATTTT 59.737 47.619 5.77 0.00 0.00 1.82
570 582 2.286772 GGAAGTGTCGCGTGTGATTTTT 60.287 45.455 5.77 0.00 0.00 1.94
571 583 3.059461 GGAAGTGTCGCGTGTGATTTTTA 60.059 43.478 5.77 0.00 0.00 1.52
572 584 4.378046 GGAAGTGTCGCGTGTGATTTTTAT 60.378 41.667 5.77 0.00 0.00 1.40
573 585 4.322101 AGTGTCGCGTGTGATTTTTATC 57.678 40.909 5.77 0.00 0.00 1.75
574 586 3.081445 GTGTCGCGTGTGATTTTTATCG 58.919 45.455 5.77 0.00 0.00 2.92
575 587 2.092995 TGTCGCGTGTGATTTTTATCGG 59.907 45.455 5.77 0.00 0.00 4.18
576 588 2.346244 GTCGCGTGTGATTTTTATCGGA 59.654 45.455 5.77 0.00 0.00 4.55
577 589 2.346244 TCGCGTGTGATTTTTATCGGAC 59.654 45.455 5.77 0.00 0.00 4.79
578 590 2.689635 GCGTGTGATTTTTATCGGACG 58.310 47.619 0.00 0.00 33.57 4.79
579 591 2.536130 GCGTGTGATTTTTATCGGACGG 60.536 50.000 0.00 0.00 32.09 4.79
580 592 2.536130 CGTGTGATTTTTATCGGACGGC 60.536 50.000 0.00 0.00 0.00 5.68
581 593 2.011222 TGTGATTTTTATCGGACGGCC 58.989 47.619 0.00 0.00 0.00 6.13
594 606 3.835378 GGACGGCCGAAAAATCTAAAA 57.165 42.857 35.90 0.00 0.00 1.52
595 607 3.754955 GGACGGCCGAAAAATCTAAAAG 58.245 45.455 35.90 0.00 0.00 2.27
596 608 3.189910 GGACGGCCGAAAAATCTAAAAGT 59.810 43.478 35.90 2.70 0.00 2.66
597 609 4.155310 ACGGCCGAAAAATCTAAAAGTG 57.845 40.909 35.90 0.00 0.00 3.16
598 610 3.816523 ACGGCCGAAAAATCTAAAAGTGA 59.183 39.130 35.90 0.00 0.00 3.41
599 611 4.276431 ACGGCCGAAAAATCTAAAAGTGAA 59.724 37.500 35.90 0.00 0.00 3.18
600 612 4.851558 CGGCCGAAAAATCTAAAAGTGAAG 59.148 41.667 24.07 0.00 0.00 3.02
601 613 5.334569 CGGCCGAAAAATCTAAAAGTGAAGA 60.335 40.000 24.07 0.00 0.00 2.87
602 614 6.621613 GGCCGAAAAATCTAAAAGTGAAGAT 58.378 36.000 0.00 0.00 33.87 2.40
603 615 6.747739 GGCCGAAAAATCTAAAAGTGAAGATC 59.252 38.462 0.00 0.00 31.20 2.75
604 616 7.362142 GGCCGAAAAATCTAAAAGTGAAGATCT 60.362 37.037 0.00 0.00 31.20 2.75
605 617 8.665685 GCCGAAAAATCTAAAAGTGAAGATCTA 58.334 33.333 0.00 0.00 31.20 1.98
613 625 9.965902 ATCTAAAAGTGAAGATCTAATGGTTGT 57.034 29.630 0.00 0.00 0.00 3.32
614 626 9.219603 TCTAAAAGTGAAGATCTAATGGTTGTG 57.780 33.333 0.00 0.00 0.00 3.33
615 627 9.219603 CTAAAAGTGAAGATCTAATGGTTGTGA 57.780 33.333 0.00 0.00 0.00 3.58
616 628 7.678947 AAAGTGAAGATCTAATGGTTGTGAG 57.321 36.000 0.00 0.00 0.00 3.51
617 629 6.365970 AGTGAAGATCTAATGGTTGTGAGT 57.634 37.500 0.00 0.00 0.00 3.41
618 630 6.169094 AGTGAAGATCTAATGGTTGTGAGTG 58.831 40.000 0.00 0.00 0.00 3.51
619 631 4.937620 TGAAGATCTAATGGTTGTGAGTGC 59.062 41.667 0.00 0.00 0.00 4.40
620 632 4.833478 AGATCTAATGGTTGTGAGTGCT 57.167 40.909 0.00 0.00 0.00 4.40
621 633 4.511527 AGATCTAATGGTTGTGAGTGCTG 58.488 43.478 0.00 0.00 0.00 4.41
622 634 4.223700 AGATCTAATGGTTGTGAGTGCTGA 59.776 41.667 0.00 0.00 0.00 4.26
623 635 4.558226 TCTAATGGTTGTGAGTGCTGAT 57.442 40.909 0.00 0.00 0.00 2.90
624 636 4.256110 TCTAATGGTTGTGAGTGCTGATG 58.744 43.478 0.00 0.00 0.00 3.07
625 637 1.830279 ATGGTTGTGAGTGCTGATGG 58.170 50.000 0.00 0.00 0.00 3.51
626 638 0.890542 TGGTTGTGAGTGCTGATGGC 60.891 55.000 0.00 0.00 42.22 4.40
627 639 1.589716 GGTTGTGAGTGCTGATGGCC 61.590 60.000 0.00 0.00 40.92 5.36
628 640 0.607489 GTTGTGAGTGCTGATGGCCT 60.607 55.000 3.32 0.00 40.92 5.19
629 641 0.607217 TTGTGAGTGCTGATGGCCTG 60.607 55.000 3.32 0.00 40.92 4.85
630 642 1.297689 GTGAGTGCTGATGGCCTGA 59.702 57.895 3.32 0.00 40.92 3.86
631 643 0.743701 GTGAGTGCTGATGGCCTGAG 60.744 60.000 3.32 0.00 40.92 3.35
632 644 0.906282 TGAGTGCTGATGGCCTGAGA 60.906 55.000 3.32 0.00 40.92 3.27
633 645 0.179078 GAGTGCTGATGGCCTGAGAG 60.179 60.000 3.32 0.00 40.92 3.20
634 646 0.616964 AGTGCTGATGGCCTGAGAGA 60.617 55.000 3.32 0.00 40.92 3.10
635 647 0.179078 GTGCTGATGGCCTGAGAGAG 60.179 60.000 3.32 0.00 40.92 3.20
636 648 1.227615 GCTGATGGCCTGAGAGAGC 60.228 63.158 3.32 0.00 34.27 4.09
637 649 1.688269 GCTGATGGCCTGAGAGAGCT 61.688 60.000 3.32 0.00 34.27 4.09
638 650 0.390124 CTGATGGCCTGAGAGAGCTC 59.610 60.000 5.27 5.27 41.67 4.09
639 651 1.047596 TGATGGCCTGAGAGAGCTCC 61.048 60.000 10.93 1.70 40.55 4.70
640 652 0.760189 GATGGCCTGAGAGAGCTCCT 60.760 60.000 10.93 7.30 40.55 3.69
641 653 0.560193 ATGGCCTGAGAGAGCTCCTA 59.440 55.000 10.93 0.00 40.55 2.94
642 654 0.336392 TGGCCTGAGAGAGCTCCTAA 59.664 55.000 10.93 0.00 40.55 2.69
643 655 1.039856 GGCCTGAGAGAGCTCCTAAG 58.960 60.000 10.93 9.61 40.55 2.18
644 656 1.039856 GCCTGAGAGAGCTCCTAAGG 58.960 60.000 22.59 22.59 40.55 2.69
645 657 1.687996 GCCTGAGAGAGCTCCTAAGGT 60.688 57.143 25.29 4.39 40.55 3.50
646 658 2.031120 CCTGAGAGAGCTCCTAAGGTG 58.969 57.143 20.20 4.35 40.55 4.00
647 659 1.408702 CTGAGAGAGCTCCTAAGGTGC 59.591 57.143 10.93 0.00 41.85 5.01
648 660 1.272704 TGAGAGAGCTCCTAAGGTGCA 60.273 52.381 10.93 0.00 43.69 4.57
649 661 1.136110 GAGAGAGCTCCTAAGGTGCAC 59.864 57.143 10.93 8.80 43.69 4.57
650 662 0.898320 GAGAGCTCCTAAGGTGCACA 59.102 55.000 20.43 0.00 43.69 4.57
651 663 0.901124 AGAGCTCCTAAGGTGCACAG 59.099 55.000 20.43 7.47 43.69 3.66
652 664 0.610687 GAGCTCCTAAGGTGCACAGT 59.389 55.000 20.43 8.02 43.69 3.55
653 665 1.002544 GAGCTCCTAAGGTGCACAGTT 59.997 52.381 20.43 13.72 43.69 3.16
654 666 1.421646 AGCTCCTAAGGTGCACAGTTT 59.578 47.619 20.43 12.00 43.69 2.66
655 667 2.158608 AGCTCCTAAGGTGCACAGTTTT 60.159 45.455 20.43 9.50 43.69 2.43
656 668 3.072476 AGCTCCTAAGGTGCACAGTTTTA 59.928 43.478 20.43 10.13 43.69 1.52
657 669 3.818773 GCTCCTAAGGTGCACAGTTTTAA 59.181 43.478 20.43 0.00 41.27 1.52
658 670 4.459337 GCTCCTAAGGTGCACAGTTTTAAT 59.541 41.667 20.43 0.00 41.27 1.40
659 671 5.619981 GCTCCTAAGGTGCACAGTTTTAATG 60.620 44.000 20.43 1.88 41.27 1.90
660 672 5.381757 TCCTAAGGTGCACAGTTTTAATGT 58.618 37.500 20.43 0.00 0.00 2.71
661 673 6.535540 TCCTAAGGTGCACAGTTTTAATGTA 58.464 36.000 20.43 0.00 0.00 2.29
662 674 7.172342 TCCTAAGGTGCACAGTTTTAATGTAT 58.828 34.615 20.43 0.00 0.00 2.29
663 675 7.335924 TCCTAAGGTGCACAGTTTTAATGTATC 59.664 37.037 20.43 0.00 0.00 2.24
664 676 7.336931 CCTAAGGTGCACAGTTTTAATGTATCT 59.663 37.037 20.43 0.00 0.00 1.98
665 677 9.378551 CTAAGGTGCACAGTTTTAATGTATCTA 57.621 33.333 20.43 0.00 0.00 1.98
666 678 8.630054 AAGGTGCACAGTTTTAATGTATCTAA 57.370 30.769 20.43 0.00 0.00 2.10
667 679 8.630054 AGGTGCACAGTTTTAATGTATCTAAA 57.370 30.769 20.43 0.00 0.00 1.85
668 680 9.243105 AGGTGCACAGTTTTAATGTATCTAAAT 57.757 29.630 20.43 0.00 0.00 1.40
669 681 9.855021 GGTGCACAGTTTTAATGTATCTAAATT 57.145 29.630 20.43 0.00 0.00 1.82
705 717 1.140852 TCGGCCCATGGAAGTAAGATG 59.859 52.381 15.22 0.00 0.00 2.90
722 734 1.588404 GATGTATTCCTGTCGTGCGTG 59.412 52.381 0.00 0.00 0.00 5.34
836 854 1.635663 CTGGCGCTCACCGGTTAAAG 61.636 60.000 2.97 3.89 37.44 1.85
838 856 1.232621 GGCGCTCACCGGTTAAAGTT 61.233 55.000 2.97 0.00 37.44 2.66
839 857 0.165295 GCGCTCACCGGTTAAAGTTC 59.835 55.000 2.97 0.00 37.44 3.01
842 860 2.762745 GCTCACCGGTTAAAGTTCTGA 58.237 47.619 2.97 0.00 0.00 3.27
854 872 7.021790 GGTTAAAGTTCTGAAATAAAGCCTCG 58.978 38.462 0.00 0.00 0.00 4.63
902 920 0.752009 AGACCCGAGCTATCTTCGCA 60.752 55.000 0.00 0.00 0.00 5.10
916 934 1.340399 TTCGCATCCCAGCCTCATCT 61.340 55.000 0.00 0.00 0.00 2.90
933 956 0.980754 TCTCAAATCCCTAGCCGCCA 60.981 55.000 0.00 0.00 0.00 5.69
964 988 1.153429 CCCCAAATCCCTCGTCGTC 60.153 63.158 0.00 0.00 0.00 4.20
994 1018 4.060667 CCGGCCCAATCCCACCTT 62.061 66.667 0.00 0.00 0.00 3.50
1020 1111 1.519455 GCGCCGCAGTTCTATCACT 60.519 57.895 3.15 0.00 0.00 3.41
1058 1149 3.591835 CCTCTCGCTCGCTCCCTC 61.592 72.222 0.00 0.00 0.00 4.30
1073 1164 0.474184 CCCTCCCACCATATTCGCTT 59.526 55.000 0.00 0.00 0.00 4.68
1092 1185 2.315386 GGTGACGACCAAGAACGGC 61.315 63.158 0.00 0.00 42.59 5.68
1134 1228 0.398664 CCTTCCCACTACCTCCGGAT 60.399 60.000 3.57 0.00 0.00 4.18
1138 1232 1.062428 TCCCACTACCTCCGGATGATT 60.062 52.381 14.21 0.00 0.00 2.57
1142 1236 2.430694 CACTACCTCCGGATGATTGTCA 59.569 50.000 14.21 0.00 0.00 3.58
1208 1303 2.420687 CCTTATCTGAGTGCCACCCTTC 60.421 54.545 0.00 0.00 0.00 3.46
1232 1327 2.042261 AGGTACCGCCCCTTCCAT 59.958 61.111 6.18 0.00 38.26 3.41
1243 1338 0.111253 CCCTTCCATATCCAGGTGCC 59.889 60.000 0.00 0.00 0.00 5.01
1342 1438 5.592282 TCACCAGAAACTACAAGCATTTTGA 59.408 36.000 0.00 0.00 0.00 2.69
1830 2096 1.820906 GCAGATGGCGCTGATTCCA 60.821 57.895 7.64 0.00 38.14 3.53
2313 2579 2.653726 TGTGCGCCAATTATGAGGAAT 58.346 42.857 4.18 0.00 0.00 3.01
2318 2584 3.378427 GCGCCAATTATGAGGAATATCCC 59.622 47.826 0.00 0.00 37.19 3.85
2457 2723 2.483714 CCGCCTCTGTGCATGTACTATT 60.484 50.000 15.25 0.00 0.00 1.73
2551 2817 2.087501 TTATTTGCGGAAGAGCGACA 57.912 45.000 0.00 0.00 40.67 4.35
2613 2879 8.904834 AGAGAGAGTTAAAAGAATACTATGCGA 58.095 33.333 0.00 0.00 0.00 5.10
2677 2943 4.899239 GGCTCGTCGCATGGAGGG 62.899 72.222 0.00 0.00 41.67 4.30
2688 2954 1.923395 ATGGAGGGGCAGGAACGAA 60.923 57.895 0.00 0.00 0.00 3.85
3213 3480 3.056536 ACGATGCAGAACTCTTGCTCTTA 60.057 43.478 0.00 0.00 0.00 2.10
3450 3717 2.239654 CTCATAGGTCCTTTCAGGCCAA 59.760 50.000 5.01 0.00 35.05 4.52
3641 3909 4.734917 ACTACACTACACTCGAATGCTTC 58.265 43.478 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 0.034767 CTGCTCCACCACCACATCAT 60.035 55.000 0.00 0.00 0.00 2.45
32 33 4.021894 CCTTGGACGGTTAGATCCTATCTG 60.022 50.000 0.00 0.00 40.51 2.90
37 48 1.497161 CCCTTGGACGGTTAGATCCT 58.503 55.000 0.00 0.00 35.86 3.24
101 113 1.152525 ACAGACGACCACCACCTCT 60.153 57.895 0.00 0.00 0.00 3.69
137 149 0.822532 GAGAGATCCGCGTTCCCCTA 60.823 60.000 4.92 0.00 0.00 3.53
138 150 2.042843 AGAGATCCGCGTTCCCCT 60.043 61.111 4.92 0.00 0.00 4.79
139 151 2.417936 GAGAGATCCGCGTTCCCC 59.582 66.667 4.92 0.00 0.00 4.81
140 152 2.417936 GGAGAGATCCGCGTTCCC 59.582 66.667 4.92 0.00 0.00 3.97
141 153 2.026301 CGGAGAGATCCGCGTTCC 59.974 66.667 4.92 1.25 46.76 3.62
148 160 0.319125 CGCTTAAGCCGGAGAGATCC 60.319 60.000 21.53 0.00 37.91 3.36
149 161 0.941936 GCGCTTAAGCCGGAGAGATC 60.942 60.000 21.53 0.00 37.91 2.75
150 162 1.068250 GCGCTTAAGCCGGAGAGAT 59.932 57.895 21.53 0.00 37.91 2.75
151 163 0.750546 TAGCGCTTAAGCCGGAGAGA 60.751 55.000 18.68 0.00 37.91 3.10
152 164 0.595310 GTAGCGCTTAAGCCGGAGAG 60.595 60.000 18.68 7.60 37.91 3.20
153 165 1.436336 GTAGCGCTTAAGCCGGAGA 59.564 57.895 18.68 0.18 37.91 3.71
154 166 1.944676 CGTAGCGCTTAAGCCGGAG 60.945 63.158 18.68 8.70 37.91 4.63
155 167 2.103538 CGTAGCGCTTAAGCCGGA 59.896 61.111 18.68 3.86 37.91 5.14
156 168 2.103538 TCGTAGCGCTTAAGCCGG 59.896 61.111 18.68 9.80 37.91 6.13
157 169 2.565394 CGTCGTAGCGCTTAAGCCG 61.565 63.158 18.68 17.96 37.91 5.52
158 170 2.228914 CCGTCGTAGCGCTTAAGCC 61.229 63.158 18.68 13.93 37.91 4.35
159 171 2.857415 GCCGTCGTAGCGCTTAAGC 61.857 63.158 18.68 17.83 37.78 3.09
160 172 3.296584 GCCGTCGTAGCGCTTAAG 58.703 61.111 18.68 7.78 0.00 1.85
178 190 3.267597 GAACATGTGGTGTGCCGCC 62.268 63.158 0.00 0.00 44.42 6.13
179 191 1.865788 ATGAACATGTGGTGTGCCGC 61.866 55.000 0.00 0.00 41.14 6.53
180 192 0.597568 AATGAACATGTGGTGTGCCG 59.402 50.000 0.00 0.00 41.14 5.69
181 193 1.337074 CCAATGAACATGTGGTGTGCC 60.337 52.381 0.00 0.00 41.14 5.01
182 194 1.340889 ACCAATGAACATGTGGTGTGC 59.659 47.619 0.00 0.00 44.05 4.57
186 198 1.133199 ACCCACCAATGAACATGTGGT 60.133 47.619 17.14 14.74 46.72 4.16
187 199 1.631405 ACCCACCAATGAACATGTGG 58.369 50.000 0.00 13.76 46.22 4.17
188 200 3.684908 TCTACCCACCAATGAACATGTG 58.315 45.455 0.00 0.00 0.00 3.21
189 201 3.587061 TCTCTACCCACCAATGAACATGT 59.413 43.478 0.00 0.00 0.00 3.21
190 202 4.080919 TCTCTCTACCCACCAATGAACATG 60.081 45.833 0.00 0.00 0.00 3.21
191 203 4.104086 TCTCTCTACCCACCAATGAACAT 58.896 43.478 0.00 0.00 0.00 2.71
192 204 3.516586 TCTCTCTACCCACCAATGAACA 58.483 45.455 0.00 0.00 0.00 3.18
193 205 4.508662 CTTCTCTCTACCCACCAATGAAC 58.491 47.826 0.00 0.00 0.00 3.18
194 206 3.519510 CCTTCTCTCTACCCACCAATGAA 59.480 47.826 0.00 0.00 0.00 2.57
195 207 3.107601 CCTTCTCTCTACCCACCAATGA 58.892 50.000 0.00 0.00 0.00 2.57
196 208 3.107601 TCCTTCTCTCTACCCACCAATG 58.892 50.000 0.00 0.00 0.00 2.82
197 209 3.491766 TCCTTCTCTCTACCCACCAAT 57.508 47.619 0.00 0.00 0.00 3.16
198 210 3.491766 ATCCTTCTCTCTACCCACCAA 57.508 47.619 0.00 0.00 0.00 3.67
199 211 3.792114 TCTATCCTTCTCTCTACCCACCA 59.208 47.826 0.00 0.00 0.00 4.17
200 212 4.456662 TCTATCCTTCTCTCTACCCACC 57.543 50.000 0.00 0.00 0.00 4.61
201 213 6.184789 CCTATCTATCCTTCTCTCTACCCAC 58.815 48.000 0.00 0.00 0.00 4.61
202 214 5.254267 CCCTATCTATCCTTCTCTCTACCCA 59.746 48.000 0.00 0.00 0.00 4.51
203 215 5.340528 CCCCTATCTATCCTTCTCTCTACCC 60.341 52.000 0.00 0.00 0.00 3.69
204 216 5.493250 TCCCCTATCTATCCTTCTCTCTACC 59.507 48.000 0.00 0.00 0.00 3.18
205 217 6.353602 CCTCCCCTATCTATCCTTCTCTCTAC 60.354 50.000 0.00 0.00 0.00 2.59
206 218 5.734140 CCTCCCCTATCTATCCTTCTCTCTA 59.266 48.000 0.00 0.00 0.00 2.43
207 219 4.544152 CCTCCCCTATCTATCCTTCTCTCT 59.456 50.000 0.00 0.00 0.00 3.10
208 220 4.542525 TCCTCCCCTATCTATCCTTCTCTC 59.457 50.000 0.00 0.00 0.00 3.20
209 221 4.528354 TCCTCCCCTATCTATCCTTCTCT 58.472 47.826 0.00 0.00 0.00 3.10
210 222 4.325816 CCTCCTCCCCTATCTATCCTTCTC 60.326 54.167 0.00 0.00 0.00 2.87
211 223 3.600617 CCTCCTCCCCTATCTATCCTTCT 59.399 52.174 0.00 0.00 0.00 2.85
212 224 3.338519 ACCTCCTCCCCTATCTATCCTTC 59.661 52.174 0.00 0.00 0.00 3.46
213 225 3.338519 GACCTCCTCCCCTATCTATCCTT 59.661 52.174 0.00 0.00 0.00 3.36
214 226 2.930405 GACCTCCTCCCCTATCTATCCT 59.070 54.545 0.00 0.00 0.00 3.24
215 227 2.023791 GGACCTCCTCCCCTATCTATCC 60.024 59.091 0.00 0.00 31.83 2.59
216 228 3.391799 GGACCTCCTCCCCTATCTATC 57.608 57.143 0.00 0.00 31.83 2.08
226 238 2.359967 CCTTGACGGGACCTCCTCC 61.360 68.421 0.00 0.00 38.55 4.30
227 239 1.305046 TCCTTGACGGGACCTCCTC 60.305 63.158 0.00 0.00 35.95 3.71
228 240 1.305381 CTCCTTGACGGGACCTCCT 60.305 63.158 0.00 0.00 35.95 3.69
229 241 2.359967 CCTCCTTGACGGGACCTCC 61.360 68.421 0.00 0.00 0.00 4.30
230 242 1.305046 TCCTCCTTGACGGGACCTC 60.305 63.158 0.00 0.00 0.00 3.85
231 243 1.305381 CTCCTCCTTGACGGGACCT 60.305 63.158 0.00 0.00 0.00 3.85
232 244 1.305046 TCTCCTCCTTGACGGGACC 60.305 63.158 0.00 0.00 0.00 4.46
233 245 1.950973 GCTCTCCTCCTTGACGGGAC 61.951 65.000 0.00 0.00 0.00 4.46
234 246 1.682684 GCTCTCCTCCTTGACGGGA 60.683 63.158 0.00 0.00 0.00 5.14
235 247 2.896443 GCTCTCCTCCTTGACGGG 59.104 66.667 0.00 0.00 0.00 5.28
236 248 2.492090 CGCTCTCCTCCTTGACGG 59.508 66.667 0.00 0.00 0.00 4.79
237 249 2.202676 GCGCTCTCCTCCTTGACG 60.203 66.667 0.00 0.00 0.00 4.35
238 250 2.185608 GGCGCTCTCCTCCTTGAC 59.814 66.667 7.64 0.00 0.00 3.18
239 251 3.077556 GGGCGCTCTCCTCCTTGA 61.078 66.667 7.64 0.00 0.00 3.02
240 252 3.382803 CTGGGCGCTCTCCTCCTTG 62.383 68.421 9.62 0.00 0.00 3.61
241 253 3.080121 CTGGGCGCTCTCCTCCTT 61.080 66.667 9.62 0.00 0.00 3.36
244 256 3.844090 GACCTGGGCGCTCTCCTC 61.844 72.222 9.62 0.00 0.00 3.71
268 280 4.736896 GAGACGACGGGGTGTGGC 62.737 72.222 0.00 0.00 0.00 5.01
269 281 4.065281 GGAGACGACGGGGTGTGG 62.065 72.222 0.00 0.00 0.00 4.17
281 293 0.452585 ACTTAAGCTCTCGCGGAGAC 59.547 55.000 23.26 15.68 44.45 3.36
282 294 2.034104 TACTTAAGCTCTCGCGGAGA 57.966 50.000 23.26 15.77 44.45 3.71
283 295 2.541999 CCTTACTTAAGCTCTCGCGGAG 60.542 54.545 17.10 17.10 44.49 4.63
284 296 1.404391 CCTTACTTAAGCTCTCGCGGA 59.596 52.381 6.13 1.01 42.32 5.54
285 297 1.536284 CCCTTACTTAAGCTCTCGCGG 60.536 57.143 6.13 0.00 42.32 6.46
286 298 1.536284 CCCCTTACTTAAGCTCTCGCG 60.536 57.143 0.00 0.00 42.32 5.87
287 299 1.807000 GCCCCTTACTTAAGCTCTCGC 60.807 57.143 1.29 0.00 32.02 5.03
288 300 1.536284 CGCCCCTTACTTAAGCTCTCG 60.536 57.143 1.29 0.00 32.02 4.04
289 301 1.202545 CCGCCCCTTACTTAAGCTCTC 60.203 57.143 1.29 0.00 32.02 3.20
290 302 0.831307 CCGCCCCTTACTTAAGCTCT 59.169 55.000 1.29 0.00 32.02 4.09
291 303 0.814410 GCCGCCCCTTACTTAAGCTC 60.814 60.000 1.29 0.00 32.02 4.09
292 304 1.223763 GCCGCCCCTTACTTAAGCT 59.776 57.895 1.29 0.00 32.02 3.74
293 305 2.178235 CGCCGCCCCTTACTTAAGC 61.178 63.158 1.29 0.00 32.02 3.09
294 306 0.808847 GTCGCCGCCCCTTACTTAAG 60.809 60.000 0.00 0.00 0.00 1.85
295 307 1.218854 GTCGCCGCCCCTTACTTAA 59.781 57.895 0.00 0.00 0.00 1.85
296 308 1.332144 ATGTCGCCGCCCCTTACTTA 61.332 55.000 0.00 0.00 0.00 2.24
297 309 1.332144 TATGTCGCCGCCCCTTACTT 61.332 55.000 0.00 0.00 0.00 2.24
298 310 1.332144 TTATGTCGCCGCCCCTTACT 61.332 55.000 0.00 0.00 0.00 2.24
299 311 0.250166 ATTATGTCGCCGCCCCTTAC 60.250 55.000 0.00 0.00 0.00 2.34
300 312 1.340088 TATTATGTCGCCGCCCCTTA 58.660 50.000 0.00 0.00 0.00 2.69
301 313 0.470766 TTATTATGTCGCCGCCCCTT 59.529 50.000 0.00 0.00 0.00 3.95
302 314 0.250166 GTTATTATGTCGCCGCCCCT 60.250 55.000 0.00 0.00 0.00 4.79
303 315 1.232621 GGTTATTATGTCGCCGCCCC 61.233 60.000 0.00 0.00 0.00 5.80
304 316 0.533308 TGGTTATTATGTCGCCGCCC 60.533 55.000 0.00 0.00 0.00 6.13
305 317 0.865769 CTGGTTATTATGTCGCCGCC 59.134 55.000 0.00 0.00 0.00 6.13
306 318 1.860676 TCTGGTTATTATGTCGCCGC 58.139 50.000 0.00 0.00 0.00 6.53
307 319 2.157668 GCATCTGGTTATTATGTCGCCG 59.842 50.000 0.00 0.00 0.00 6.46
308 320 2.157668 CGCATCTGGTTATTATGTCGCC 59.842 50.000 0.00 0.00 0.00 5.54
309 321 2.411547 GCGCATCTGGTTATTATGTCGC 60.412 50.000 0.30 0.00 38.20 5.19
310 322 2.157668 GGCGCATCTGGTTATTATGTCG 59.842 50.000 10.83 0.00 0.00 4.35
311 323 2.157668 CGGCGCATCTGGTTATTATGTC 59.842 50.000 10.83 0.00 0.00 3.06
312 324 2.143122 CGGCGCATCTGGTTATTATGT 58.857 47.619 10.83 0.00 0.00 2.29
313 325 1.135972 GCGGCGCATCTGGTTATTATG 60.136 52.381 29.21 0.00 0.00 1.90
314 326 1.156736 GCGGCGCATCTGGTTATTAT 58.843 50.000 29.21 0.00 0.00 1.28
315 327 0.882927 GGCGGCGCATCTGGTTATTA 60.883 55.000 34.36 0.00 0.00 0.98
316 328 2.186826 GGCGGCGCATCTGGTTATT 61.187 57.895 34.36 0.00 0.00 1.40
317 329 2.591715 GGCGGCGCATCTGGTTAT 60.592 61.111 34.36 0.00 0.00 1.89
328 340 4.012895 GTATGCAATCCGGCGGCG 62.013 66.667 26.12 26.12 36.28 6.46
329 341 2.591715 AGTATGCAATCCGGCGGC 60.592 61.111 23.83 10.34 36.28 6.53
330 342 0.946221 GAGAGTATGCAATCCGGCGG 60.946 60.000 22.51 22.51 36.28 6.13
331 343 0.946221 GGAGAGTATGCAATCCGGCG 60.946 60.000 0.00 0.00 36.28 6.46
332 344 0.394565 AGGAGAGTATGCAATCCGGC 59.605 55.000 0.00 0.00 36.91 6.13
333 345 2.366916 AGAAGGAGAGTATGCAATCCGG 59.633 50.000 0.00 0.00 36.91 5.14
334 346 3.553922 GGAGAAGGAGAGTATGCAATCCG 60.554 52.174 0.00 0.00 36.91 4.18
335 347 3.244387 GGGAGAAGGAGAGTATGCAATCC 60.244 52.174 0.00 0.00 0.00 3.01
336 348 3.645687 AGGGAGAAGGAGAGTATGCAATC 59.354 47.826 0.00 0.00 0.00 2.67
337 349 3.663198 AGGGAGAAGGAGAGTATGCAAT 58.337 45.455 0.00 0.00 0.00 3.56
338 350 3.121929 AGGGAGAAGGAGAGTATGCAA 57.878 47.619 0.00 0.00 0.00 4.08
339 351 2.856760 AGGGAGAAGGAGAGTATGCA 57.143 50.000 0.00 0.00 0.00 3.96
340 352 2.367241 GGAAGGGAGAAGGAGAGTATGC 59.633 54.545 0.00 0.00 0.00 3.14
341 353 2.969262 GGGAAGGGAGAAGGAGAGTATG 59.031 54.545 0.00 0.00 0.00 2.39
342 354 2.425102 CGGGAAGGGAGAAGGAGAGTAT 60.425 54.545 0.00 0.00 0.00 2.12
343 355 1.063867 CGGGAAGGGAGAAGGAGAGTA 60.064 57.143 0.00 0.00 0.00 2.59
344 356 0.324830 CGGGAAGGGAGAAGGAGAGT 60.325 60.000 0.00 0.00 0.00 3.24
345 357 0.324830 ACGGGAAGGGAGAAGGAGAG 60.325 60.000 0.00 0.00 0.00 3.20
346 358 0.116541 AACGGGAAGGGAGAAGGAGA 59.883 55.000 0.00 0.00 0.00 3.71
347 359 0.537653 GAACGGGAAGGGAGAAGGAG 59.462 60.000 0.00 0.00 0.00 3.69
348 360 1.255667 CGAACGGGAAGGGAGAAGGA 61.256 60.000 0.00 0.00 0.00 3.36
349 361 1.218316 CGAACGGGAAGGGAGAAGG 59.782 63.158 0.00 0.00 0.00 3.46
350 362 1.218316 CCGAACGGGAAGGGAGAAG 59.782 63.158 5.25 0.00 38.47 2.85
351 363 2.951101 GCCGAACGGGAAGGGAGAA 61.951 63.158 15.01 0.00 38.47 2.87
352 364 3.387947 GCCGAACGGGAAGGGAGA 61.388 66.667 15.01 0.00 38.47 3.71
353 365 4.814294 CGCCGAACGGGAAGGGAG 62.814 72.222 15.01 0.00 38.47 4.30
372 384 4.498520 AGTCTGTCCCATCGCGCG 62.499 66.667 26.76 26.76 0.00 6.86
373 385 2.887568 CAGTCTGTCCCATCGCGC 60.888 66.667 0.00 0.00 0.00 6.86
374 386 2.202797 CCAGTCTGTCCCATCGCG 60.203 66.667 0.00 0.00 0.00 5.87
375 387 2.187946 CCCAGTCTGTCCCATCGC 59.812 66.667 0.00 0.00 0.00 4.58
376 388 0.684479 TCTCCCAGTCTGTCCCATCG 60.684 60.000 0.00 0.00 0.00 3.84
377 389 1.118838 CTCTCCCAGTCTGTCCCATC 58.881 60.000 0.00 0.00 0.00 3.51
378 390 0.712979 TCTCTCCCAGTCTGTCCCAT 59.287 55.000 0.00 0.00 0.00 4.00
379 391 0.040351 CTCTCTCCCAGTCTGTCCCA 59.960 60.000 0.00 0.00 0.00 4.37
380 392 0.333312 TCTCTCTCCCAGTCTGTCCC 59.667 60.000 0.00 0.00 0.00 4.46
381 393 2.031120 CATCTCTCTCCCAGTCTGTCC 58.969 57.143 0.00 0.00 0.00 4.02
382 394 1.408702 GCATCTCTCTCCCAGTCTGTC 59.591 57.143 0.00 0.00 0.00 3.51
383 395 1.484038 GCATCTCTCTCCCAGTCTGT 58.516 55.000 0.00 0.00 0.00 3.41
384 396 0.385029 CGCATCTCTCTCCCAGTCTG 59.615 60.000 0.00 0.00 0.00 3.51
385 397 0.754957 CCGCATCTCTCTCCCAGTCT 60.755 60.000 0.00 0.00 0.00 3.24
386 398 1.739049 CCGCATCTCTCTCCCAGTC 59.261 63.158 0.00 0.00 0.00 3.51
387 399 1.760086 CCCGCATCTCTCTCCCAGT 60.760 63.158 0.00 0.00 0.00 4.00
388 400 2.506061 CCCCGCATCTCTCTCCCAG 61.506 68.421 0.00 0.00 0.00 4.45
389 401 2.444706 CCCCGCATCTCTCTCCCA 60.445 66.667 0.00 0.00 0.00 4.37
390 402 2.444895 ACCCCGCATCTCTCTCCC 60.445 66.667 0.00 0.00 0.00 4.30
391 403 2.801631 CCACCCCGCATCTCTCTCC 61.802 68.421 0.00 0.00 0.00 3.71
392 404 2.801631 CCCACCCCGCATCTCTCTC 61.802 68.421 0.00 0.00 0.00 3.20
393 405 2.765807 CCCACCCCGCATCTCTCT 60.766 66.667 0.00 0.00 0.00 3.10
394 406 3.866582 CCCCACCCCGCATCTCTC 61.867 72.222 0.00 0.00 0.00 3.20
412 424 2.500815 GAAAACTGCCCCCTCCCCTC 62.501 65.000 0.00 0.00 0.00 4.30
413 425 2.454511 AAAACTGCCCCCTCCCCT 60.455 61.111 0.00 0.00 0.00 4.79
414 426 2.037367 GAAAACTGCCCCCTCCCC 59.963 66.667 0.00 0.00 0.00 4.81
415 427 2.037367 GGAAAACTGCCCCCTCCC 59.963 66.667 0.00 0.00 0.00 4.30
416 428 0.900182 CAAGGAAAACTGCCCCCTCC 60.900 60.000 0.00 0.00 0.00 4.30
417 429 1.536073 GCAAGGAAAACTGCCCCCTC 61.536 60.000 0.00 0.00 0.00 4.30
418 430 1.533994 GCAAGGAAAACTGCCCCCT 60.534 57.895 0.00 0.00 0.00 4.79
419 431 1.121407 AAGCAAGGAAAACTGCCCCC 61.121 55.000 0.00 0.00 0.00 5.40
420 432 0.033920 CAAGCAAGGAAAACTGCCCC 59.966 55.000 0.00 0.00 0.00 5.80
421 433 0.033920 CCAAGCAAGGAAAACTGCCC 59.966 55.000 0.00 0.00 0.00 5.36
422 434 0.752658 ACCAAGCAAGGAAAACTGCC 59.247 50.000 1.01 0.00 0.00 4.85
423 435 2.204237 CAACCAAGCAAGGAAAACTGC 58.796 47.619 1.01 0.00 0.00 4.40
424 436 2.204237 GCAACCAAGCAAGGAAAACTG 58.796 47.619 1.01 0.00 0.00 3.16
425 437 1.202405 CGCAACCAAGCAAGGAAAACT 60.202 47.619 1.01 0.00 0.00 2.66
426 438 1.208259 CGCAACCAAGCAAGGAAAAC 58.792 50.000 1.01 0.00 0.00 2.43
427 439 0.820871 ACGCAACCAAGCAAGGAAAA 59.179 45.000 1.01 0.00 0.00 2.29
428 440 0.820871 AACGCAACCAAGCAAGGAAA 59.179 45.000 1.01 0.00 0.00 3.13
429 441 0.820871 AAACGCAACCAAGCAAGGAA 59.179 45.000 1.01 0.00 0.00 3.36
430 442 0.820871 AAAACGCAACCAAGCAAGGA 59.179 45.000 1.01 0.00 0.00 3.36
431 443 1.592543 GAAAAACGCAACCAAGCAAGG 59.407 47.619 0.00 0.00 0.00 3.61
432 444 2.535574 GAGAAAAACGCAACCAAGCAAG 59.464 45.455 0.00 0.00 0.00 4.01
433 445 2.535331 GAGAAAAACGCAACCAAGCAA 58.465 42.857 0.00 0.00 0.00 3.91
434 446 1.532921 CGAGAAAAACGCAACCAAGCA 60.533 47.619 0.00 0.00 0.00 3.91
435 447 1.120437 CGAGAAAAACGCAACCAAGC 58.880 50.000 0.00 0.00 0.00 4.01
436 448 2.602217 CCTCGAGAAAAACGCAACCAAG 60.602 50.000 15.71 0.00 0.00 3.61
437 449 1.332375 CCTCGAGAAAAACGCAACCAA 59.668 47.619 15.71 0.00 0.00 3.67
438 450 0.941542 CCTCGAGAAAAACGCAACCA 59.058 50.000 15.71 0.00 0.00 3.67
439 451 0.237498 CCCTCGAGAAAAACGCAACC 59.763 55.000 15.71 0.00 0.00 3.77
440 452 0.237498 CCCCTCGAGAAAAACGCAAC 59.763 55.000 15.71 0.00 0.00 4.17
441 453 0.179040 ACCCCTCGAGAAAAACGCAA 60.179 50.000 15.71 0.00 0.00 4.85
442 454 0.601841 GACCCCTCGAGAAAAACGCA 60.602 55.000 15.71 0.00 0.00 5.24
443 455 1.296755 GGACCCCTCGAGAAAAACGC 61.297 60.000 15.71 0.00 0.00 4.84
444 456 0.320697 AGGACCCCTCGAGAAAAACG 59.679 55.000 15.71 0.00 0.00 3.60
445 457 2.096220 GAGGACCCCTCGAGAAAAAC 57.904 55.000 15.71 0.92 41.08 2.43
454 466 2.364448 AAGAGCCGAGGACCCCTC 60.364 66.667 2.97 2.97 46.44 4.30
455 467 2.364448 GAAGAGCCGAGGACCCCT 60.364 66.667 0.00 0.00 36.03 4.79
456 468 3.839432 CGAAGAGCCGAGGACCCC 61.839 72.222 0.00 0.00 0.00 4.95
457 469 4.516195 GCGAAGAGCCGAGGACCC 62.516 72.222 0.00 0.00 40.81 4.46
467 479 4.082523 TGGGCCGGAAGCGAAGAG 62.083 66.667 5.05 0.00 45.17 2.85
468 480 4.388499 GTGGGCCGGAAGCGAAGA 62.388 66.667 5.05 0.00 45.17 2.87
481 493 1.379710 TTGATTGGGCCATCGTGGG 60.380 57.895 7.26 0.00 38.19 4.61
482 494 1.666209 GGTTGATTGGGCCATCGTGG 61.666 60.000 7.26 0.25 41.55 4.94
483 495 0.964860 TGGTTGATTGGGCCATCGTG 60.965 55.000 7.26 0.00 0.00 4.35
484 496 0.680921 CTGGTTGATTGGGCCATCGT 60.681 55.000 7.26 0.00 0.00 3.73
485 497 1.386525 CCTGGTTGATTGGGCCATCG 61.387 60.000 7.26 0.00 0.00 3.84
486 498 1.679559 GCCTGGTTGATTGGGCCATC 61.680 60.000 7.26 8.06 38.77 3.51
487 499 1.686800 GCCTGGTTGATTGGGCCAT 60.687 57.895 7.26 0.00 38.77 4.40
488 500 2.283821 GCCTGGTTGATTGGGCCA 60.284 61.111 0.00 0.00 38.77 5.36
489 501 3.451894 CGCCTGGTTGATTGGGCC 61.452 66.667 0.00 0.00 41.35 5.80
490 502 3.451894 CCGCCTGGTTGATTGGGC 61.452 66.667 0.00 0.00 41.02 5.36
491 503 3.451894 GCCGCCTGGTTGATTGGG 61.452 66.667 0.00 0.00 37.67 4.12
492 504 3.814268 CGCCGCCTGGTTGATTGG 61.814 66.667 0.00 0.00 37.67 3.16
493 505 4.481112 GCGCCGCCTGGTTGATTG 62.481 66.667 0.00 0.00 37.67 2.67
510 522 1.514873 GCTCTCGCGGCAAAATTGG 60.515 57.895 6.13 0.00 0.00 3.16
511 523 0.795735 CTGCTCTCGCGGCAAAATTG 60.796 55.000 6.13 0.00 39.30 2.32
512 524 1.503542 CTGCTCTCGCGGCAAAATT 59.496 52.632 6.13 0.00 39.30 1.82
513 525 3.181367 CTGCTCTCGCGGCAAAAT 58.819 55.556 6.13 0.00 39.30 1.82
523 535 4.400961 AACCGGGCAGCTGCTCTC 62.401 66.667 34.48 23.11 40.01 3.20
524 536 4.400961 GAACCGGGCAGCTGCTCT 62.401 66.667 34.48 18.11 40.01 4.09
525 537 4.704833 TGAACCGGGCAGCTGCTC 62.705 66.667 35.82 32.79 41.70 4.26
526 538 4.711949 CTGAACCGGGCAGCTGCT 62.712 66.667 35.82 18.07 41.70 4.24
528 540 2.743928 GACTGAACCGGGCAGCTG 60.744 66.667 22.04 10.11 36.86 4.24
529 541 4.379243 CGACTGAACCGGGCAGCT 62.379 66.667 22.04 12.06 36.86 4.24
535 547 4.367023 TTCCCGCGACTGAACCGG 62.367 66.667 8.23 0.00 41.60 5.28
536 548 2.809601 CTTCCCGCGACTGAACCG 60.810 66.667 8.23 0.00 0.00 4.44
537 549 2.027625 CACTTCCCGCGACTGAACC 61.028 63.158 8.23 0.00 0.00 3.62
538 550 1.282930 GACACTTCCCGCGACTGAAC 61.283 60.000 8.23 0.00 0.00 3.18
539 551 1.006571 GACACTTCCCGCGACTGAA 60.007 57.895 8.23 6.60 0.00 3.02
540 552 2.649034 GACACTTCCCGCGACTGA 59.351 61.111 8.23 0.00 0.00 3.41
541 553 2.805353 CGACACTTCCCGCGACTG 60.805 66.667 8.23 0.00 0.00 3.51
542 554 4.719369 GCGACACTTCCCGCGACT 62.719 66.667 8.23 0.00 42.02 4.18
547 559 3.403057 CACACGCGACACTTCCCG 61.403 66.667 15.93 0.00 0.00 5.14
548 560 0.949105 AATCACACGCGACACTTCCC 60.949 55.000 15.93 0.00 0.00 3.97
549 561 0.865769 AAATCACACGCGACACTTCC 59.134 50.000 15.93 0.00 0.00 3.46
550 562 2.663279 AAAATCACACGCGACACTTC 57.337 45.000 15.93 0.00 0.00 3.01
551 563 4.665645 CGATAAAAATCACACGCGACACTT 60.666 41.667 15.93 0.00 0.00 3.16
552 564 3.181534 CGATAAAAATCACACGCGACACT 60.182 43.478 15.93 0.00 0.00 3.55
553 565 3.081445 CGATAAAAATCACACGCGACAC 58.919 45.455 15.93 0.00 0.00 3.67
554 566 2.092995 CCGATAAAAATCACACGCGACA 59.907 45.455 15.93 0.00 0.00 4.35
555 567 2.346244 TCCGATAAAAATCACACGCGAC 59.654 45.455 15.93 0.00 0.00 5.19
556 568 2.346244 GTCCGATAAAAATCACACGCGA 59.654 45.455 15.93 0.00 0.00 5.87
557 569 2.689635 GTCCGATAAAAATCACACGCG 58.310 47.619 3.53 3.53 0.00 6.01
558 570 2.536130 CCGTCCGATAAAAATCACACGC 60.536 50.000 0.00 0.00 0.00 5.34
559 571 2.536130 GCCGTCCGATAAAAATCACACG 60.536 50.000 0.00 0.00 0.00 4.49
560 572 2.223180 GGCCGTCCGATAAAAATCACAC 60.223 50.000 0.00 0.00 0.00 3.82
561 573 2.011222 GGCCGTCCGATAAAAATCACA 58.989 47.619 0.00 0.00 0.00 3.58
562 574 2.750301 GGCCGTCCGATAAAAATCAC 57.250 50.000 0.00 0.00 0.00 3.06
574 586 3.189910 ACTTTTAGATTTTTCGGCCGTCC 59.810 43.478 27.15 8.90 0.00 4.79
575 587 4.083696 TCACTTTTAGATTTTTCGGCCGTC 60.084 41.667 27.15 15.22 0.00 4.79
576 588 3.816523 TCACTTTTAGATTTTTCGGCCGT 59.183 39.130 27.15 4.54 0.00 5.68
577 589 4.413495 TCACTTTTAGATTTTTCGGCCG 57.587 40.909 22.12 22.12 0.00 6.13
578 590 6.009115 TCTTCACTTTTAGATTTTTCGGCC 57.991 37.500 0.00 0.00 0.00 6.13
579 591 7.530863 AGATCTTCACTTTTAGATTTTTCGGC 58.469 34.615 0.00 0.00 31.46 5.54
587 599 9.965902 ACAACCATTAGATCTTCACTTTTAGAT 57.034 29.630 0.00 0.00 33.92 1.98
588 600 9.219603 CACAACCATTAGATCTTCACTTTTAGA 57.780 33.333 0.00 0.00 0.00 2.10
589 601 9.219603 TCACAACCATTAGATCTTCACTTTTAG 57.780 33.333 0.00 0.00 0.00 1.85
590 602 9.219603 CTCACAACCATTAGATCTTCACTTTTA 57.780 33.333 0.00 0.00 0.00 1.52
591 603 7.721399 ACTCACAACCATTAGATCTTCACTTTT 59.279 33.333 0.00 0.00 0.00 2.27
592 604 7.173907 CACTCACAACCATTAGATCTTCACTTT 59.826 37.037 0.00 0.00 0.00 2.66
593 605 6.652481 CACTCACAACCATTAGATCTTCACTT 59.348 38.462 0.00 0.00 0.00 3.16
594 606 6.169094 CACTCACAACCATTAGATCTTCACT 58.831 40.000 0.00 0.00 0.00 3.41
595 607 5.163814 GCACTCACAACCATTAGATCTTCAC 60.164 44.000 0.00 0.00 0.00 3.18
596 608 4.937620 GCACTCACAACCATTAGATCTTCA 59.062 41.667 0.00 0.00 0.00 3.02
597 609 5.064452 CAGCACTCACAACCATTAGATCTTC 59.936 44.000 0.00 0.00 0.00 2.87
598 610 4.940046 CAGCACTCACAACCATTAGATCTT 59.060 41.667 0.00 0.00 0.00 2.40
599 611 4.223700 TCAGCACTCACAACCATTAGATCT 59.776 41.667 0.00 0.00 0.00 2.75
600 612 4.507710 TCAGCACTCACAACCATTAGATC 58.492 43.478 0.00 0.00 0.00 2.75
601 613 4.558226 TCAGCACTCACAACCATTAGAT 57.442 40.909 0.00 0.00 0.00 1.98
602 614 4.256110 CATCAGCACTCACAACCATTAGA 58.744 43.478 0.00 0.00 0.00 2.10
603 615 3.376234 CCATCAGCACTCACAACCATTAG 59.624 47.826 0.00 0.00 0.00 1.73
604 616 3.346315 CCATCAGCACTCACAACCATTA 58.654 45.455 0.00 0.00 0.00 1.90
605 617 2.165167 CCATCAGCACTCACAACCATT 58.835 47.619 0.00 0.00 0.00 3.16
606 618 1.830279 CCATCAGCACTCACAACCAT 58.170 50.000 0.00 0.00 0.00 3.55
607 619 0.890542 GCCATCAGCACTCACAACCA 60.891 55.000 0.00 0.00 42.97 3.67
608 620 1.589716 GGCCATCAGCACTCACAACC 61.590 60.000 0.00 0.00 46.50 3.77
609 621 0.607489 AGGCCATCAGCACTCACAAC 60.607 55.000 5.01 0.00 46.50 3.32
610 622 0.607217 CAGGCCATCAGCACTCACAA 60.607 55.000 5.01 0.00 46.50 3.33
611 623 1.002990 CAGGCCATCAGCACTCACA 60.003 57.895 5.01 0.00 46.50 3.58
612 624 0.743701 CTCAGGCCATCAGCACTCAC 60.744 60.000 5.01 0.00 46.50 3.51
613 625 0.906282 TCTCAGGCCATCAGCACTCA 60.906 55.000 5.01 0.00 46.50 3.41
614 626 0.179078 CTCTCAGGCCATCAGCACTC 60.179 60.000 5.01 0.00 46.50 3.51
615 627 0.616964 TCTCTCAGGCCATCAGCACT 60.617 55.000 5.01 0.00 46.50 4.40
616 628 0.179078 CTCTCTCAGGCCATCAGCAC 60.179 60.000 5.01 0.00 46.50 4.40
617 629 1.969200 GCTCTCTCAGGCCATCAGCA 61.969 60.000 5.01 0.00 46.50 4.41
618 630 1.227615 GCTCTCTCAGGCCATCAGC 60.228 63.158 5.01 0.00 42.60 4.26
619 631 0.390124 GAGCTCTCTCAGGCCATCAG 59.610 60.000 5.01 0.00 39.16 2.90
620 632 1.047596 GGAGCTCTCTCAGGCCATCA 61.048 60.000 14.64 0.00 41.13 3.07
621 633 0.760189 AGGAGCTCTCTCAGGCCATC 60.760 60.000 14.64 0.00 41.13 3.51
622 634 0.560193 TAGGAGCTCTCTCAGGCCAT 59.440 55.000 14.64 0.00 41.13 4.40
623 635 0.336392 TTAGGAGCTCTCTCAGGCCA 59.664 55.000 14.64 0.00 41.13 5.36
624 636 1.039856 CTTAGGAGCTCTCTCAGGCC 58.960 60.000 14.64 0.00 41.13 5.19
625 637 1.039856 CCTTAGGAGCTCTCTCAGGC 58.960 60.000 14.64 0.00 41.13 4.85
626 638 2.031120 CACCTTAGGAGCTCTCTCAGG 58.969 57.143 21.56 21.56 41.13 3.86
627 639 1.408702 GCACCTTAGGAGCTCTCTCAG 59.591 57.143 14.64 9.61 41.13 3.35
628 640 1.272704 TGCACCTTAGGAGCTCTCTCA 60.273 52.381 20.42 0.00 39.93 3.27
629 641 1.136110 GTGCACCTTAGGAGCTCTCTC 59.864 57.143 20.42 0.00 39.93 3.20
630 642 1.190643 GTGCACCTTAGGAGCTCTCT 58.809 55.000 20.42 11.52 39.93 3.10
631 643 0.898320 TGTGCACCTTAGGAGCTCTC 59.102 55.000 20.42 11.72 39.93 3.20
632 644 0.901124 CTGTGCACCTTAGGAGCTCT 59.099 55.000 20.42 2.18 39.93 4.09
633 645 0.610687 ACTGTGCACCTTAGGAGCTC 59.389 55.000 20.42 17.19 39.93 4.09
634 646 1.059913 AACTGTGCACCTTAGGAGCT 58.940 50.000 20.42 0.00 39.93 4.09
635 647 1.897560 AAACTGTGCACCTTAGGAGC 58.102 50.000 15.69 13.71 39.68 4.70
636 648 5.473504 ACATTAAAACTGTGCACCTTAGGAG 59.526 40.000 15.69 6.21 0.00 3.69
637 649 5.381757 ACATTAAAACTGTGCACCTTAGGA 58.618 37.500 15.69 0.00 0.00 2.94
638 650 5.705609 ACATTAAAACTGTGCACCTTAGG 57.294 39.130 15.69 0.00 0.00 2.69
639 651 8.268850 AGATACATTAAAACTGTGCACCTTAG 57.731 34.615 15.69 7.82 0.00 2.18
640 652 9.727859 TTAGATACATTAAAACTGTGCACCTTA 57.272 29.630 15.69 4.16 0.00 2.69
641 653 8.630054 TTAGATACATTAAAACTGTGCACCTT 57.370 30.769 15.69 2.38 0.00 3.50
642 654 8.630054 TTTAGATACATTAAAACTGTGCACCT 57.370 30.769 15.69 0.94 0.00 4.00
643 655 9.855021 AATTTAGATACATTAAAACTGTGCACC 57.145 29.630 15.69 0.00 0.00 5.01
653 665 8.185505 GCCCGACACAAATTTAGATACATTAAA 58.814 33.333 0.00 0.00 0.00 1.52
654 666 7.201750 GGCCCGACACAAATTTAGATACATTAA 60.202 37.037 0.00 0.00 0.00 1.40
655 667 6.261381 GGCCCGACACAAATTTAGATACATTA 59.739 38.462 0.00 0.00 0.00 1.90
656 668 5.067283 GGCCCGACACAAATTTAGATACATT 59.933 40.000 0.00 0.00 0.00 2.71
657 669 4.578928 GGCCCGACACAAATTTAGATACAT 59.421 41.667 0.00 0.00 0.00 2.29
658 670 3.942748 GGCCCGACACAAATTTAGATACA 59.057 43.478 0.00 0.00 0.00 2.29
659 671 4.196971 AGGCCCGACACAAATTTAGATAC 58.803 43.478 0.00 0.00 0.00 2.24
660 672 4.497291 AGGCCCGACACAAATTTAGATA 57.503 40.909 0.00 0.00 0.00 1.98
661 673 3.366052 AGGCCCGACACAAATTTAGAT 57.634 42.857 0.00 0.00 0.00 1.98
662 674 2.817258 CAAGGCCCGACACAAATTTAGA 59.183 45.455 0.00 0.00 0.00 2.10
663 675 2.671070 GCAAGGCCCGACACAAATTTAG 60.671 50.000 0.00 0.00 0.00 1.85
664 676 1.271102 GCAAGGCCCGACACAAATTTA 59.729 47.619 0.00 0.00 0.00 1.40
665 677 0.033366 GCAAGGCCCGACACAAATTT 59.967 50.000 0.00 0.00 0.00 1.82
666 678 0.827507 AGCAAGGCCCGACACAAATT 60.828 50.000 0.00 0.00 0.00 1.82
667 679 1.228552 AGCAAGGCCCGACACAAAT 60.229 52.632 0.00 0.00 0.00 2.32
668 680 1.896660 GAGCAAGGCCCGACACAAA 60.897 57.895 0.00 0.00 0.00 2.83
669 681 2.281484 GAGCAAGGCCCGACACAA 60.281 61.111 0.00 0.00 0.00 3.33
670 682 4.680237 CGAGCAAGGCCCGACACA 62.680 66.667 0.00 0.00 0.00 3.72
693 705 5.421056 ACGACAGGAATACATCTTACTTCCA 59.579 40.000 0.00 0.00 39.71 3.53
694 706 5.749109 CACGACAGGAATACATCTTACTTCC 59.251 44.000 0.00 0.00 37.92 3.46
705 717 0.989890 GTCACGCACGACAGGAATAC 59.010 55.000 0.00 0.00 35.88 1.89
820 837 0.165295 GAACTTTAACCGGTGAGCGC 59.835 55.000 8.52 0.00 0.00 5.92
836 854 4.929808 TCACTCGAGGCTTTATTTCAGAAC 59.070 41.667 18.41 0.00 0.00 3.01
838 856 4.801330 TCACTCGAGGCTTTATTTCAGA 57.199 40.909 18.41 0.00 0.00 3.27
839 857 5.862924 TTTCACTCGAGGCTTTATTTCAG 57.137 39.130 18.41 0.00 0.00 3.02
902 920 2.107901 GGATTTGAGATGAGGCTGGGAT 59.892 50.000 0.00 0.00 0.00 3.85
916 934 1.223487 GTGGCGGCTAGGGATTTGA 59.777 57.895 11.43 0.00 0.00 2.69
979 1003 3.076916 GCAAGGTGGGATTGGGCC 61.077 66.667 0.00 0.00 0.00 5.80
980 1004 3.076916 GGCAAGGTGGGATTGGGC 61.077 66.667 0.00 0.00 0.00 5.36
983 1007 1.076777 ATCCGGCAAGGTGGGATTG 60.077 57.895 0.00 0.00 37.26 2.67
1024 1115 2.373707 GGCTGGAGGAGGTGCATCT 61.374 63.158 0.00 0.00 0.00 2.90
1049 1140 0.399949 AATATGGTGGGAGGGAGCGA 60.400 55.000 0.00 0.00 0.00 4.93
1092 1185 1.127951 GACGACAACATTTGTAGGCGG 59.872 52.381 0.00 0.00 45.52 6.13
1134 1228 1.213491 CACGTTGACGGTGACAATCA 58.787 50.000 8.52 0.00 44.95 2.57
1138 1232 2.586635 GGCACGTTGACGGTGACA 60.587 61.111 8.52 0.00 44.95 3.58
1208 1303 3.873812 GGGCGGTACCTGGATGGG 61.874 72.222 10.90 0.00 41.11 4.00
1232 1327 2.279935 ACAAAAACGGCACCTGGATA 57.720 45.000 0.00 0.00 0.00 2.59
1243 1338 7.443259 TCCTAAAGAAGGGAATACAAAAACG 57.557 36.000 0.00 0.00 46.55 3.60
1342 1438 1.210204 ACCCAGCACATGAGGGATGT 61.210 55.000 19.13 0.00 46.98 3.06
1830 2096 1.889105 CAGGTCGCTGTTGCACACT 60.889 57.895 0.00 0.00 39.64 3.55
2197 2463 3.256960 GGACTGCCACCCCAGGAA 61.257 66.667 0.00 0.00 37.16 3.36
2313 2579 2.230508 CTGAAATAGCTACGGCGGGATA 59.769 50.000 13.24 7.23 44.37 2.59
2318 2584 2.493713 ACTCTGAAATAGCTACGGCG 57.506 50.000 4.80 4.80 44.37 6.46
2457 2723 3.531538 GCTTCTCCGTGTCAATCCAATA 58.468 45.455 0.00 0.00 0.00 1.90
2551 2817 2.219325 CTCAGCTTCCGCCTTCTCGT 62.219 60.000 0.00 0.00 36.60 4.18
2677 2943 0.110192 CTTTCGCTTTCGTTCCTGCC 60.110 55.000 0.00 0.00 36.96 4.85
2688 2954 1.374758 CACGAGCCTCCTTTCGCTT 60.375 57.895 0.00 0.00 40.32 4.68
3086 3353 9.504708 TTTATTCCAGTTCTACCGTTTAATTCA 57.495 29.630 0.00 0.00 0.00 2.57
3131 3398 0.394192 TGCATCGATGGAGGATGACC 59.606 55.000 26.00 7.18 43.07 4.02
3213 3480 1.484240 GGCAAGAGTACTGCATCCTCT 59.516 52.381 0.00 4.57 37.16 3.69
3450 3717 3.167485 TCACCAATTACGTAGGTCTGGT 58.833 45.455 11.85 11.85 35.34 4.00
3641 3909 1.608717 CCCTTCAGACGGAGGTGGAG 61.609 65.000 0.00 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.