Multiple sequence alignment - TraesCS2B01G153000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G153000 chr2B 100.000 3131 0 0 1 3131 121378398 121375268 0.000000e+00 5782.0
1 TraesCS2B01G153000 chr2B 88.834 815 80 7 872 1678 121478935 121478124 0.000000e+00 990.0
2 TraesCS2B01G153000 chr2B 94.939 573 25 4 2562 3131 634624111 634623540 0.000000e+00 894.0
3 TraesCS2B01G153000 chr2B 81.860 1086 118 39 839 1872 121433325 121432267 0.000000e+00 841.0
4 TraesCS2B01G153000 chr2B 85.455 825 99 10 872 1683 121483466 121482650 0.000000e+00 839.0
5 TraesCS2B01G153000 chr2B 81.648 1068 113 30 842 1872 121383449 121382428 0.000000e+00 809.0
6 TraesCS2B01G153000 chr2B 86.067 689 71 16 1003 1683 121475104 121474433 0.000000e+00 717.0
7 TraesCS2B01G153000 chr2B 99.640 278 1 0 543 820 704875064 704875341 2.790000e-140 508.0
8 TraesCS2B01G153000 chr2D 93.097 1695 73 11 853 2536 78406642 78404981 0.000000e+00 2442.0
9 TraesCS2B01G153000 chr2D 87.864 824 85 10 872 1683 78509201 78508381 0.000000e+00 953.0
10 TraesCS2B01G153000 chr2D 93.849 569 32 3 2566 3131 635742740 635743308 0.000000e+00 854.0
11 TraesCS2B01G153000 chr2D 86.262 808 82 14 888 1684 78502565 78501776 0.000000e+00 850.0
12 TraesCS2B01G153000 chr2D 81.873 833 88 33 867 1683 78436339 78435554 0.000000e+00 643.0
13 TraesCS2B01G153000 chr2D 85.926 540 36 23 1 531 78412381 78411873 9.880000e-150 540.0
14 TraesCS2B01G153000 chr2D 83.925 535 60 13 1111 1628 145683392 145682867 3.630000e-134 488.0
15 TraesCS2B01G153000 chr2D 87.079 356 35 7 18 366 73224072 73223721 2.930000e-105 392.0
16 TraesCS2B01G153000 chr2D 84.211 95 11 4 1759 1852 78434216 78434125 4.300000e-14 89.8
17 TraesCS2B01G153000 chr2A 88.213 789 66 12 857 1627 78323109 78323888 0.000000e+00 917.0
18 TraesCS2B01G153000 chr2A 84.746 826 74 20 872 1684 78756631 78755845 0.000000e+00 780.0
19 TraesCS2B01G153000 chr2A 86.396 419 48 5 872 1282 78234259 78234676 1.710000e-122 449.0
20 TraesCS2B01G153000 chr2A 83.806 494 56 11 1147 1628 156514600 156515081 6.160000e-122 448.0
21 TraesCS2B01G153000 chr2A 85.609 271 30 5 2299 2565 78325628 78325893 3.080000e-70 276.0
22 TraesCS2B01G153000 chr2A 84.507 142 14 7 2034 2172 78324361 78324497 1.960000e-27 134.0
23 TraesCS2B01G153000 chr5D 95.280 572 25 2 2562 3131 455147432 455148003 0.000000e+00 905.0
24 TraesCS2B01G153000 chr5D 95.246 568 25 2 2566 3131 455075552 455076119 0.000000e+00 898.0
25 TraesCS2B01G153000 chr5D 95.070 568 26 2 2566 3131 455004510 455005077 0.000000e+00 893.0
26 TraesCS2B01G153000 chr5D 84.794 388 44 10 6 384 51249306 51249687 2.950000e-100 375.0
27 TraesCS2B01G153000 chr5D 84.800 375 46 7 16 383 515044322 515043952 1.770000e-97 366.0
28 TraesCS2B01G153000 chr5D 84.278 388 46 10 6 384 51325869 51326250 6.380000e-97 364.0
29 TraesCS2B01G153000 chr3B 95.062 567 24 3 2567 3131 466277623 466278187 0.000000e+00 889.0
30 TraesCS2B01G153000 chr3B 98.921 278 3 0 543 820 335120207 335120484 6.030000e-137 497.0
31 TraesCS2B01G153000 chr7B 94.894 568 27 2 2566 3131 436664578 436665145 0.000000e+00 887.0
32 TraesCS2B01G153000 chr7B 98.917 277 3 0 542 818 560540247 560540523 2.170000e-136 496.0
33 TraesCS2B01G153000 chr3A 94.718 568 28 2 2566 3131 711128742 711128175 0.000000e+00 881.0
34 TraesCS2B01G153000 chr1B 94.718 568 28 2 2566 3131 525662612 525663179 0.000000e+00 881.0
35 TraesCS2B01G153000 chr1B 84.384 333 41 7 6 331 473718016 473718344 1.810000e-82 316.0
36 TraesCS2B01G153000 chr6B 99.638 276 1 0 545 820 663020645 663020370 3.600000e-139 505.0
37 TraesCS2B01G153000 chr6A 99.281 278 1 1 545 821 2174810 2175087 4.660000e-138 501.0
38 TraesCS2B01G153000 chr6A 98.227 282 3 2 538 818 5957709 5957429 2.810000e-135 492.0
39 TraesCS2B01G153000 chr4B 99.281 278 1 1 543 820 233235710 233235986 4.660000e-138 501.0
40 TraesCS2B01G153000 chrUn 98.929 280 2 1 538 817 348465224 348465502 1.680000e-137 499.0
41 TraesCS2B01G153000 chr1A 99.270 274 2 0 545 818 564527931 564527658 2.170000e-136 496.0
42 TraesCS2B01G153000 chr5A 85.561 374 43 6 18 384 45445569 45445200 6.340000e-102 381.0
43 TraesCS2B01G153000 chr4A 83.467 375 48 8 18 385 45150580 45150213 1.390000e-88 337.0
44 TraesCS2B01G153000 chr3D 82.663 323 44 8 6 321 402811547 402811864 3.080000e-70 276.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G153000 chr2B 121375268 121378398 3130 True 5782.000000 5782 100.000000 1 3131 1 chr2B.!!$R1 3130
1 TraesCS2B01G153000 chr2B 634623540 634624111 571 True 894.000000 894 94.939000 2562 3131 1 chr2B.!!$R4 569
2 TraesCS2B01G153000 chr2B 121474433 121483466 9033 True 848.666667 990 86.785333 872 1683 3 chr2B.!!$R5 811
3 TraesCS2B01G153000 chr2B 121432267 121433325 1058 True 841.000000 841 81.860000 839 1872 1 chr2B.!!$R3 1033
4 TraesCS2B01G153000 chr2B 121382428 121383449 1021 True 809.000000 809 81.648000 842 1872 1 chr2B.!!$R2 1030
5 TraesCS2B01G153000 chr2D 78404981 78406642 1661 True 2442.000000 2442 93.097000 853 2536 1 chr2D.!!$R2 1683
6 TraesCS2B01G153000 chr2D 78508381 78509201 820 True 953.000000 953 87.864000 872 1683 1 chr2D.!!$R5 811
7 TraesCS2B01G153000 chr2D 635742740 635743308 568 False 854.000000 854 93.849000 2566 3131 1 chr2D.!!$F1 565
8 TraesCS2B01G153000 chr2D 78501776 78502565 789 True 850.000000 850 86.262000 888 1684 1 chr2D.!!$R4 796
9 TraesCS2B01G153000 chr2D 78411873 78412381 508 True 540.000000 540 85.926000 1 531 1 chr2D.!!$R3 530
10 TraesCS2B01G153000 chr2D 145682867 145683392 525 True 488.000000 488 83.925000 1111 1628 1 chr2D.!!$R6 517
11 TraesCS2B01G153000 chr2D 78434125 78436339 2214 True 366.400000 643 83.042000 867 1852 2 chr2D.!!$R7 985
12 TraesCS2B01G153000 chr2A 78755845 78756631 786 True 780.000000 780 84.746000 872 1684 1 chr2A.!!$R1 812
13 TraesCS2B01G153000 chr2A 78323109 78325893 2784 False 442.333333 917 86.109667 857 2565 3 chr2A.!!$F3 1708
14 TraesCS2B01G153000 chr5D 455147432 455148003 571 False 905.000000 905 95.280000 2562 3131 1 chr5D.!!$F5 569
15 TraesCS2B01G153000 chr5D 455075552 455076119 567 False 898.000000 898 95.246000 2566 3131 1 chr5D.!!$F4 565
16 TraesCS2B01G153000 chr5D 455004510 455005077 567 False 893.000000 893 95.070000 2566 3131 1 chr5D.!!$F3 565
17 TraesCS2B01G153000 chr3B 466277623 466278187 564 False 889.000000 889 95.062000 2567 3131 1 chr3B.!!$F2 564
18 TraesCS2B01G153000 chr7B 436664578 436665145 567 False 887.000000 887 94.894000 2566 3131 1 chr7B.!!$F1 565
19 TraesCS2B01G153000 chr3A 711128175 711128742 567 True 881.000000 881 94.718000 2566 3131 1 chr3A.!!$R1 565
20 TraesCS2B01G153000 chr1B 525662612 525663179 567 False 881.000000 881 94.718000 2566 3131 1 chr1B.!!$F2 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
540 552 0.041663 AAATTGGTCACGCAACGTCG 60.042 50.0 0.0 0.0 38.32 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2514 9679 0.246635 GCACGCTCCCTAGAAACTCA 59.753 55.0 0.0 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 4.697756 CGGCACCCTTGAAGCGGA 62.698 66.667 6.70 0.00 0.00 5.54
144 145 0.390124 TAACCGGCGACACACTTTCT 59.610 50.000 9.30 0.00 0.00 2.52
145 146 0.390124 AACCGGCGACACACTTTCTA 59.610 50.000 9.30 0.00 0.00 2.10
156 157 5.221145 CGACACACTTTCTAGATCAGCCTAT 60.221 44.000 0.00 0.00 0.00 2.57
181 182 6.595772 GTCATCTTGACGCTGAGATTAAAT 57.404 37.500 0.00 0.00 37.67 1.40
203 205 4.553330 TCACTTGGATGTTAGGGAGTTC 57.447 45.455 0.00 0.00 0.00 3.01
204 206 3.907474 TCACTTGGATGTTAGGGAGTTCA 59.093 43.478 0.00 0.00 0.00 3.18
216 222 8.698973 TGTTAGGGAGTTCATTGTAAAATTGA 57.301 30.769 0.00 0.00 0.00 2.57
244 250 8.174085 AGAGAGTATAATAGGGTAGCACATCTT 58.826 37.037 0.00 0.00 0.00 2.40
255 261 3.034721 AGCACATCTTTTGGCACATTG 57.965 42.857 0.00 0.00 39.30 2.82
259 265 4.559300 GCACATCTTTTGGCACATTGTAGT 60.559 41.667 0.00 0.00 39.30 2.73
270 282 5.537295 TGGCACATTGTAGTCGTACCTATAT 59.463 40.000 0.00 0.00 0.00 0.86
285 297 7.069702 TCGTACCTATATTGTGGTATGGTTGAA 59.930 37.037 15.41 1.65 42.82 2.69
286 298 7.876068 CGTACCTATATTGTGGTATGGTTGAAT 59.124 37.037 10.93 0.00 40.37 2.57
287 299 9.569122 GTACCTATATTGTGGTATGGTTGAATT 57.431 33.333 0.00 0.00 40.43 2.17
288 300 8.691661 ACCTATATTGTGGTATGGTTGAATTC 57.308 34.615 0.00 0.00 34.36 2.17
289 301 8.278639 ACCTATATTGTGGTATGGTTGAATTCA 58.721 33.333 3.38 3.38 34.36 2.57
290 302 9.130661 CCTATATTGTGGTATGGTTGAATTCAA 57.869 33.333 16.91 16.91 0.00 2.69
315 327 5.998454 ACTCAAGTCTTTCATGTTGTGAG 57.002 39.130 0.00 0.00 38.29 3.51
319 331 3.406764 AGTCTTTCATGTTGTGAGGAGC 58.593 45.455 0.00 0.00 38.29 4.70
373 385 4.601857 TGGATTAGAACTTCCTTTCACCCT 59.398 41.667 0.00 0.00 32.95 4.34
406 418 7.464830 AAACTATTTCGGATATCACAGAACG 57.535 36.000 4.83 0.00 0.00 3.95
407 419 6.387041 ACTATTTCGGATATCACAGAACGA 57.613 37.500 4.83 0.20 0.00 3.85
408 420 6.439599 ACTATTTCGGATATCACAGAACGAG 58.560 40.000 4.83 8.61 0.00 4.18
409 421 4.713824 TTTCGGATATCACAGAACGAGT 57.286 40.909 4.83 0.00 0.00 4.18
410 422 4.713824 TTCGGATATCACAGAACGAGTT 57.286 40.909 4.83 0.00 0.00 3.01
411 423 4.288670 TCGGATATCACAGAACGAGTTC 57.711 45.455 4.83 7.83 39.78 3.01
412 424 3.066342 TCGGATATCACAGAACGAGTTCC 59.934 47.826 11.87 0.00 40.33 3.62
413 425 3.718815 GGATATCACAGAACGAGTTCCC 58.281 50.000 11.87 1.01 40.33 3.97
414 426 3.385111 GGATATCACAGAACGAGTTCCCT 59.615 47.826 11.87 0.00 40.33 4.20
415 427 4.141914 GGATATCACAGAACGAGTTCCCTT 60.142 45.833 11.87 0.00 40.33 3.95
416 428 2.814280 TCACAGAACGAGTTCCCTTC 57.186 50.000 11.87 0.00 40.33 3.46
417 429 1.000607 TCACAGAACGAGTTCCCTTCG 60.001 52.381 11.87 0.00 43.38 3.79
418 430 0.317479 ACAGAACGAGTTCCCTTCGG 59.683 55.000 11.87 0.00 42.12 4.30
419 431 0.601558 CAGAACGAGTTCCCTTCGGA 59.398 55.000 11.87 0.00 42.12 4.55
420 432 1.204941 CAGAACGAGTTCCCTTCGGAT 59.795 52.381 11.87 0.00 42.12 4.18
421 433 2.426024 CAGAACGAGTTCCCTTCGGATA 59.574 50.000 11.87 0.00 42.12 2.59
422 434 2.688958 AGAACGAGTTCCCTTCGGATAG 59.311 50.000 11.87 0.00 42.12 2.08
423 435 1.400737 ACGAGTTCCCTTCGGATAGG 58.599 55.000 0.00 0.00 42.12 2.57
431 443 1.789523 CCTTCGGATAGGGACAAGGA 58.210 55.000 0.00 0.00 36.48 3.36
432 444 2.116238 CCTTCGGATAGGGACAAGGAA 58.884 52.381 0.00 0.00 36.48 3.36
433 445 2.103263 CCTTCGGATAGGGACAAGGAAG 59.897 54.545 0.00 0.00 36.48 3.46
434 446 1.120530 TCGGATAGGGACAAGGAAGC 58.879 55.000 0.00 0.00 0.00 3.86
435 447 0.106894 CGGATAGGGACAAGGAAGCC 59.893 60.000 0.00 0.00 0.00 4.35
436 448 0.106894 GGATAGGGACAAGGAAGCCG 59.893 60.000 0.00 0.00 0.00 5.52
437 449 1.120530 GATAGGGACAAGGAAGCCGA 58.879 55.000 0.00 0.00 0.00 5.54
438 450 1.485066 GATAGGGACAAGGAAGCCGAA 59.515 52.381 0.00 0.00 0.00 4.30
439 451 1.354101 TAGGGACAAGGAAGCCGAAA 58.646 50.000 0.00 0.00 0.00 3.46
440 452 0.476771 AGGGACAAGGAAGCCGAAAA 59.523 50.000 0.00 0.00 0.00 2.29
441 453 1.133606 AGGGACAAGGAAGCCGAAAAA 60.134 47.619 0.00 0.00 0.00 1.94
442 454 1.269723 GGGACAAGGAAGCCGAAAAAG 59.730 52.381 0.00 0.00 0.00 2.27
443 455 1.335964 GGACAAGGAAGCCGAAAAAGC 60.336 52.381 0.00 0.00 0.00 3.51
444 456 0.673985 ACAAGGAAGCCGAAAAAGCC 59.326 50.000 0.00 0.00 0.00 4.35
445 457 0.673437 CAAGGAAGCCGAAAAAGCCA 59.327 50.000 0.00 0.00 0.00 4.75
446 458 1.273327 CAAGGAAGCCGAAAAAGCCAT 59.727 47.619 0.00 0.00 0.00 4.40
447 459 1.632589 AGGAAGCCGAAAAAGCCATT 58.367 45.000 0.00 0.00 0.00 3.16
448 460 1.273327 AGGAAGCCGAAAAAGCCATTG 59.727 47.619 0.00 0.00 0.00 2.82
449 461 1.070821 GAAGCCGAAAAAGCCATTGC 58.929 50.000 0.00 0.00 37.95 3.56
450 462 0.667184 AAGCCGAAAAAGCCATTGCG 60.667 50.000 0.00 0.00 44.33 4.85
451 463 1.372872 GCCGAAAAAGCCATTGCGT 60.373 52.632 0.00 0.00 44.33 5.24
452 464 1.616872 GCCGAAAAAGCCATTGCGTG 61.617 55.000 0.00 0.00 44.33 5.34
461 473 3.111536 CCATTGCGTGGCTTCAAAG 57.888 52.632 0.00 0.00 42.12 2.77
462 474 0.597568 CCATTGCGTGGCTTCAAAGA 59.402 50.000 0.00 0.00 42.12 2.52
463 475 1.203052 CCATTGCGTGGCTTCAAAGAT 59.797 47.619 0.00 0.00 42.12 2.40
464 476 2.523015 CATTGCGTGGCTTCAAAGATC 58.477 47.619 0.00 0.00 0.00 2.75
465 477 1.603456 TTGCGTGGCTTCAAAGATCA 58.397 45.000 0.00 0.00 0.00 2.92
466 478 1.603456 TGCGTGGCTTCAAAGATCAA 58.397 45.000 0.00 0.00 0.00 2.57
467 479 1.266718 TGCGTGGCTTCAAAGATCAAC 59.733 47.619 0.00 0.00 0.00 3.18
468 480 1.537202 GCGTGGCTTCAAAGATCAACT 59.463 47.619 0.00 0.00 0.00 3.16
469 481 2.742053 GCGTGGCTTCAAAGATCAACTA 59.258 45.455 0.00 0.00 0.00 2.24
470 482 3.181516 GCGTGGCTTCAAAGATCAACTAG 60.182 47.826 0.00 0.00 0.00 2.57
471 483 4.245660 CGTGGCTTCAAAGATCAACTAGA 58.754 43.478 0.00 0.00 0.00 2.43
472 484 4.690748 CGTGGCTTCAAAGATCAACTAGAA 59.309 41.667 0.00 0.00 0.00 2.10
473 485 5.163913 CGTGGCTTCAAAGATCAACTAGAAG 60.164 44.000 0.00 2.60 40.57 2.85
474 486 5.123027 GTGGCTTCAAAGATCAACTAGAAGG 59.877 44.000 0.00 0.00 39.30 3.46
475 487 5.221925 TGGCTTCAAAGATCAACTAGAAGGT 60.222 40.000 0.00 0.00 39.30 3.50
476 488 5.707764 GGCTTCAAAGATCAACTAGAAGGTT 59.292 40.000 0.00 0.00 39.30 3.50
477 489 6.128145 GGCTTCAAAGATCAACTAGAAGGTTC 60.128 42.308 0.00 0.00 39.30 3.62
478 490 6.652900 GCTTCAAAGATCAACTAGAAGGTTCT 59.347 38.462 0.00 0.00 39.30 3.01
479 491 7.819900 GCTTCAAAGATCAACTAGAAGGTTCTA 59.180 37.037 0.00 0.00 39.30 2.10
488 500 2.663826 AGAAGGTTCTAGAGCAAGCG 57.336 50.000 8.96 0.00 35.34 4.68
489 501 1.205893 AGAAGGTTCTAGAGCAAGCGG 59.794 52.381 8.96 0.00 35.34 5.52
490 502 0.977395 AAGGTTCTAGAGCAAGCGGT 59.023 50.000 8.96 0.00 0.00 5.68
491 503 0.533032 AGGTTCTAGAGCAAGCGGTC 59.467 55.000 8.96 0.00 40.07 4.79
492 504 0.802607 GGTTCTAGAGCAAGCGGTCG 60.803 60.000 8.96 0.00 44.60 4.79
493 505 0.170561 GTTCTAGAGCAAGCGGTCGA 59.829 55.000 1.11 0.00 44.60 4.20
494 506 0.452184 TTCTAGAGCAAGCGGTCGAG 59.548 55.000 0.00 0.00 44.60 4.04
495 507 1.064946 CTAGAGCAAGCGGTCGAGG 59.935 63.158 0.00 0.00 44.60 4.63
496 508 2.343163 CTAGAGCAAGCGGTCGAGGG 62.343 65.000 0.00 0.00 44.60 4.30
497 509 4.821589 GAGCAAGCGGTCGAGGGG 62.822 72.222 0.00 0.00 0.00 4.79
499 511 4.388499 GCAAGCGGTCGAGGGGAA 62.388 66.667 0.00 0.00 0.00 3.97
500 512 2.125512 CAAGCGGTCGAGGGGAAG 60.126 66.667 0.00 0.00 0.00 3.46
501 513 2.283676 AAGCGGTCGAGGGGAAGA 60.284 61.111 0.00 0.00 0.00 2.87
502 514 1.686110 AAGCGGTCGAGGGGAAGAT 60.686 57.895 0.00 0.00 0.00 2.40
503 515 1.677637 AAGCGGTCGAGGGGAAGATC 61.678 60.000 0.00 0.00 0.00 2.75
504 516 2.423898 GCGGTCGAGGGGAAGATCA 61.424 63.158 0.00 0.00 0.00 2.92
505 517 1.956629 GCGGTCGAGGGGAAGATCAA 61.957 60.000 0.00 0.00 0.00 2.57
506 518 0.103208 CGGTCGAGGGGAAGATCAAG 59.897 60.000 0.00 0.00 0.00 3.02
507 519 1.196012 GGTCGAGGGGAAGATCAAGT 58.804 55.000 0.00 0.00 0.00 3.16
508 520 2.385803 GGTCGAGGGGAAGATCAAGTA 58.614 52.381 0.00 0.00 0.00 2.24
509 521 2.362717 GGTCGAGGGGAAGATCAAGTAG 59.637 54.545 0.00 0.00 0.00 2.57
510 522 3.025262 GTCGAGGGGAAGATCAAGTAGT 58.975 50.000 0.00 0.00 0.00 2.73
511 523 3.067040 GTCGAGGGGAAGATCAAGTAGTC 59.933 52.174 0.00 0.00 0.00 2.59
512 524 2.033550 CGAGGGGAAGATCAAGTAGTCG 59.966 54.545 0.00 0.00 0.00 4.18
513 525 2.362717 GAGGGGAAGATCAAGTAGTCGG 59.637 54.545 0.00 0.00 0.00 4.79
514 526 2.024273 AGGGGAAGATCAAGTAGTCGGA 60.024 50.000 0.00 0.00 0.00 4.55
515 527 2.966516 GGGGAAGATCAAGTAGTCGGAT 59.033 50.000 0.00 0.00 0.00 4.18
516 528 4.140994 AGGGGAAGATCAAGTAGTCGGATA 60.141 45.833 0.00 0.00 0.00 2.59
517 529 4.587684 GGGGAAGATCAAGTAGTCGGATAA 59.412 45.833 0.00 0.00 0.00 1.75
518 530 5.509332 GGGGAAGATCAAGTAGTCGGATAAC 60.509 48.000 0.00 0.00 0.00 1.89
519 531 5.509332 GGGAAGATCAAGTAGTCGGATAACC 60.509 48.000 0.00 0.00 0.00 2.85
520 532 5.068723 GGAAGATCAAGTAGTCGGATAACCA 59.931 44.000 0.00 0.00 35.59 3.67
521 533 6.406624 GGAAGATCAAGTAGTCGGATAACCAA 60.407 42.308 0.00 0.00 35.59 3.67
522 534 6.540438 AGATCAAGTAGTCGGATAACCAAA 57.460 37.500 0.00 0.00 35.59 3.28
523 535 6.942976 AGATCAAGTAGTCGGATAACCAAAA 58.057 36.000 0.00 0.00 35.59 2.44
524 536 7.565680 AGATCAAGTAGTCGGATAACCAAAAT 58.434 34.615 0.00 0.00 35.59 1.82
525 537 8.047310 AGATCAAGTAGTCGGATAACCAAAATT 58.953 33.333 0.00 0.00 35.59 1.82
526 538 7.372451 TCAAGTAGTCGGATAACCAAAATTG 57.628 36.000 0.00 0.00 35.59 2.32
537 549 1.127701 CCAAAATTGGTCACGCAACG 58.872 50.000 3.95 0.00 43.43 4.10
538 550 1.535015 CCAAAATTGGTCACGCAACGT 60.535 47.619 3.95 0.00 43.43 3.99
539 551 1.778591 CAAAATTGGTCACGCAACGTC 59.221 47.619 0.00 0.00 38.32 4.34
540 552 0.041663 AAATTGGTCACGCAACGTCG 60.042 50.000 0.00 0.00 38.32 5.12
541 553 2.438385 AATTGGTCACGCAACGTCGC 62.438 55.000 0.00 0.00 38.32 5.19
542 554 4.578898 TGGTCACGCAACGTCGCT 62.579 61.111 0.00 0.00 38.32 4.93
543 555 2.429571 GGTCACGCAACGTCGCTA 60.430 61.111 0.00 0.00 38.32 4.26
544 556 2.017783 GGTCACGCAACGTCGCTAA 61.018 57.895 0.00 0.00 38.32 3.09
545 557 1.411089 GTCACGCAACGTCGCTAAG 59.589 57.895 0.00 0.00 38.32 2.18
546 558 1.731613 TCACGCAACGTCGCTAAGG 60.732 57.895 0.00 0.00 38.32 2.69
547 559 2.431942 ACGCAACGTCGCTAAGGG 60.432 61.111 0.00 0.00 33.69 3.95
548 560 3.849953 CGCAACGTCGCTAAGGGC 61.850 66.667 0.00 0.00 37.64 5.19
549 561 2.740826 GCAACGTCGCTAAGGGCA 60.741 61.111 0.00 0.00 41.91 5.36
550 562 2.106683 GCAACGTCGCTAAGGGCAT 61.107 57.895 0.00 0.00 41.91 4.40
551 563 1.715585 CAACGTCGCTAAGGGCATG 59.284 57.895 0.00 0.00 41.91 4.06
552 564 1.019278 CAACGTCGCTAAGGGCATGT 61.019 55.000 0.00 0.00 41.91 3.21
553 565 0.533491 AACGTCGCTAAGGGCATGTA 59.467 50.000 0.00 0.00 41.91 2.29
554 566 0.179119 ACGTCGCTAAGGGCATGTAC 60.179 55.000 0.00 0.00 41.91 2.90
555 567 0.179121 CGTCGCTAAGGGCATGTACA 60.179 55.000 0.00 0.00 41.91 2.90
556 568 1.737696 CGTCGCTAAGGGCATGTACAA 60.738 52.381 0.00 0.00 41.91 2.41
557 569 2.561569 GTCGCTAAGGGCATGTACAAT 58.438 47.619 0.00 0.00 41.91 2.71
558 570 2.287915 GTCGCTAAGGGCATGTACAATG 59.712 50.000 0.00 0.12 41.91 2.82
559 571 1.603802 CGCTAAGGGCATGTACAATGG 59.396 52.381 0.00 0.00 41.91 3.16
560 572 2.654863 GCTAAGGGCATGTACAATGGT 58.345 47.619 0.00 0.00 41.35 3.55
561 573 3.023832 GCTAAGGGCATGTACAATGGTT 58.976 45.455 0.00 0.00 41.35 3.67
562 574 3.181487 GCTAAGGGCATGTACAATGGTTG 60.181 47.826 0.00 0.00 41.35 3.77
563 575 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
564 576 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
565 577 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
566 578 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
567 579 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
568 580 4.037923 GGGCATGTACAATGGTTGATAAGG 59.962 45.833 0.00 0.00 0.00 2.69
569 581 4.644685 GGCATGTACAATGGTTGATAAGGT 59.355 41.667 0.00 0.00 0.00 3.50
570 582 5.825679 GGCATGTACAATGGTTGATAAGGTA 59.174 40.000 0.00 0.00 0.00 3.08
571 583 6.017109 GGCATGTACAATGGTTGATAAGGTAG 60.017 42.308 0.00 0.00 0.00 3.18
572 584 6.542370 GCATGTACAATGGTTGATAAGGTAGT 59.458 38.462 0.00 0.00 0.00 2.73
573 585 7.254795 GCATGTACAATGGTTGATAAGGTAGTC 60.255 40.741 0.00 0.00 0.00 2.59
574 586 7.490657 TGTACAATGGTTGATAAGGTAGTCT 57.509 36.000 0.00 0.00 0.00 3.24
575 587 7.913789 TGTACAATGGTTGATAAGGTAGTCTT 58.086 34.615 0.00 0.00 39.40 3.01
576 588 9.038072 TGTACAATGGTTGATAAGGTAGTCTTA 57.962 33.333 0.00 0.00 41.66 2.10
590 602 7.719871 AGGTAGTCTTATCTTAAGTCTTGCA 57.280 36.000 1.63 0.00 0.00 4.08
591 603 8.312669 AGGTAGTCTTATCTTAAGTCTTGCAT 57.687 34.615 1.63 0.00 0.00 3.96
592 604 8.200792 AGGTAGTCTTATCTTAAGTCTTGCATG 58.799 37.037 1.63 0.00 0.00 4.06
593 605 7.982354 GGTAGTCTTATCTTAAGTCTTGCATGT 59.018 37.037 1.63 0.00 0.00 3.21
608 620 9.836864 AGTCTTGCATGTAATTTAGATATGACA 57.163 29.630 0.00 0.00 0.00 3.58
635 647 6.380079 AAAAGAGTCTACAATGGGTCATCT 57.620 37.500 0.00 0.00 0.00 2.90
636 648 5.606348 AAGAGTCTACAATGGGTCATCTC 57.394 43.478 0.00 0.00 0.00 2.75
637 649 4.877773 AGAGTCTACAATGGGTCATCTCT 58.122 43.478 0.00 0.00 0.00 3.10
638 650 5.276440 AGAGTCTACAATGGGTCATCTCTT 58.724 41.667 0.00 0.00 30.83 2.85
639 651 6.436027 AGAGTCTACAATGGGTCATCTCTTA 58.564 40.000 0.00 0.00 30.83 2.10
640 652 6.549364 AGAGTCTACAATGGGTCATCTCTTAG 59.451 42.308 0.00 0.00 30.83 2.18
641 653 5.069781 AGTCTACAATGGGTCATCTCTTAGC 59.930 44.000 0.00 0.00 0.00 3.09
642 654 3.567478 ACAATGGGTCATCTCTTAGCC 57.433 47.619 0.00 0.00 0.00 3.93
643 655 3.118531 ACAATGGGTCATCTCTTAGCCT 58.881 45.455 0.00 0.00 34.30 4.58
644 656 3.525199 ACAATGGGTCATCTCTTAGCCTT 59.475 43.478 0.00 0.00 34.30 4.35
645 657 4.721776 ACAATGGGTCATCTCTTAGCCTTA 59.278 41.667 0.00 0.00 34.30 2.69
646 658 5.370880 ACAATGGGTCATCTCTTAGCCTTAT 59.629 40.000 0.00 0.00 34.30 1.73
647 659 5.753721 ATGGGTCATCTCTTAGCCTTATC 57.246 43.478 0.00 0.00 34.30 1.75
648 660 4.820775 TGGGTCATCTCTTAGCCTTATCT 58.179 43.478 0.00 0.00 34.30 1.98
649 661 5.219739 TGGGTCATCTCTTAGCCTTATCTT 58.780 41.667 0.00 0.00 34.30 2.40
650 662 5.305644 TGGGTCATCTCTTAGCCTTATCTTC 59.694 44.000 0.00 0.00 34.30 2.87
651 663 5.305644 GGGTCATCTCTTAGCCTTATCTTCA 59.694 44.000 0.00 0.00 0.00 3.02
652 664 6.183361 GGGTCATCTCTTAGCCTTATCTTCAA 60.183 42.308 0.00 0.00 0.00 2.69
653 665 7.449247 GGTCATCTCTTAGCCTTATCTTCAAT 58.551 38.462 0.00 0.00 0.00 2.57
654 666 8.589338 GGTCATCTCTTAGCCTTATCTTCAATA 58.411 37.037 0.00 0.00 0.00 1.90
655 667 9.988815 GTCATCTCTTAGCCTTATCTTCAATAA 57.011 33.333 0.00 0.00 0.00 1.40
656 668 9.988815 TCATCTCTTAGCCTTATCTTCAATAAC 57.011 33.333 0.00 0.00 0.00 1.89
657 669 9.995003 CATCTCTTAGCCTTATCTTCAATAACT 57.005 33.333 0.00 0.00 0.00 2.24
665 677 9.771534 AGCCTTATCTTCAATAACTAGTCATTC 57.228 33.333 0.00 0.00 0.00 2.67
666 678 8.994170 GCCTTATCTTCAATAACTAGTCATTCC 58.006 37.037 0.00 0.00 0.00 3.01
678 690 9.975218 ATAACTAGTCATTCCTAAAAATGTGGT 57.025 29.630 0.00 0.00 37.77 4.16
679 691 7.687941 ACTAGTCATTCCTAAAAATGTGGTG 57.312 36.000 0.00 0.00 37.77 4.17
680 692 7.458397 ACTAGTCATTCCTAAAAATGTGGTGA 58.542 34.615 0.00 0.00 37.77 4.02
681 693 6.824305 AGTCATTCCTAAAAATGTGGTGAG 57.176 37.500 0.00 0.00 37.77 3.51
682 694 6.542821 AGTCATTCCTAAAAATGTGGTGAGA 58.457 36.000 0.00 0.00 37.77 3.27
683 695 6.431234 AGTCATTCCTAAAAATGTGGTGAGAC 59.569 38.462 0.00 0.00 37.77 3.36
684 696 6.206634 GTCATTCCTAAAAATGTGGTGAGACA 59.793 38.462 0.00 0.00 37.77 3.41
685 697 6.947733 TCATTCCTAAAAATGTGGTGAGACAT 59.052 34.615 0.00 0.00 38.23 3.06
686 698 8.106462 TCATTCCTAAAAATGTGGTGAGACATA 58.894 33.333 0.00 0.00 35.43 2.29
687 699 8.906867 CATTCCTAAAAATGTGGTGAGACATAT 58.093 33.333 0.00 0.00 35.43 1.78
688 700 8.877864 TTCCTAAAAATGTGGTGAGACATATT 57.122 30.769 0.00 0.00 35.43 1.28
689 701 8.279970 TCCTAAAAATGTGGTGAGACATATTG 57.720 34.615 0.00 0.00 35.43 1.90
690 702 7.888021 TCCTAAAAATGTGGTGAGACATATTGT 59.112 33.333 0.00 0.00 35.43 2.71
691 703 7.970061 CCTAAAAATGTGGTGAGACATATTGTG 59.030 37.037 0.00 0.00 35.43 3.33
692 704 4.970662 AATGTGGTGAGACATATTGTGC 57.029 40.909 0.00 0.00 35.43 4.57
693 705 3.701205 TGTGGTGAGACATATTGTGCT 57.299 42.857 0.00 0.00 0.00 4.40
694 706 4.817318 TGTGGTGAGACATATTGTGCTA 57.183 40.909 0.00 0.00 0.00 3.49
695 707 5.159273 TGTGGTGAGACATATTGTGCTAA 57.841 39.130 0.00 0.00 0.00 3.09
696 708 5.178061 TGTGGTGAGACATATTGTGCTAAG 58.822 41.667 0.00 0.00 0.00 2.18
697 709 5.046663 TGTGGTGAGACATATTGTGCTAAGA 60.047 40.000 0.00 0.00 0.00 2.10
698 710 5.521735 GTGGTGAGACATATTGTGCTAAGAG 59.478 44.000 0.00 0.00 0.00 2.85
699 711 5.422012 TGGTGAGACATATTGTGCTAAGAGA 59.578 40.000 0.00 0.00 0.00 3.10
700 712 6.098838 TGGTGAGACATATTGTGCTAAGAGAT 59.901 38.462 0.00 0.00 0.00 2.75
701 713 6.644592 GGTGAGACATATTGTGCTAAGAGATC 59.355 42.308 0.00 0.00 0.00 2.75
702 714 7.205992 GTGAGACATATTGTGCTAAGAGATCA 58.794 38.462 0.00 0.00 0.00 2.92
703 715 7.871973 GTGAGACATATTGTGCTAAGAGATCAT 59.128 37.037 0.00 0.00 0.00 2.45
704 716 8.087136 TGAGACATATTGTGCTAAGAGATCATC 58.913 37.037 0.00 0.00 0.00 2.92
705 717 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
706 718 8.306038 AGACATATTGTGCTAAGAGATCATCTC 58.694 37.037 6.55 6.55 43.70 2.75
741 753 9.574516 TCTTAAATAAGAGAAGACAAGCCTTTT 57.425 29.630 0.00 0.00 37.40 2.27
742 754 9.833182 CTTAAATAAGAGAAGACAAGCCTTTTC 57.167 33.333 0.00 0.00 35.33 2.29
743 755 9.574516 TTAAATAAGAGAAGACAAGCCTTTTCT 57.425 29.630 0.00 0.00 38.69 2.52
744 756 8.470657 AAATAAGAGAAGACAAGCCTTTTCTT 57.529 30.769 5.57 5.57 44.56 2.52
745 757 9.574516 AAATAAGAGAAGACAAGCCTTTTCTTA 57.425 29.630 5.86 14.67 45.53 2.10
747 759 7.446001 AAGAGAAGACAAGCCTTTTCTTATG 57.554 36.000 5.29 0.00 42.29 1.90
748 760 6.773638 AGAGAAGACAAGCCTTTTCTTATGA 58.226 36.000 5.29 0.00 35.01 2.15
749 761 6.878389 AGAGAAGACAAGCCTTTTCTTATGAG 59.122 38.462 5.29 0.00 35.01 2.90
750 762 6.538263 AGAAGACAAGCCTTTTCTTATGAGT 58.462 36.000 5.86 0.00 29.54 3.41
751 763 7.001073 AGAAGACAAGCCTTTTCTTATGAGTT 58.999 34.615 5.86 0.00 29.54 3.01
752 764 6.809630 AGACAAGCCTTTTCTTATGAGTTC 57.190 37.500 0.00 0.00 0.00 3.01
753 765 6.538263 AGACAAGCCTTTTCTTATGAGTTCT 58.462 36.000 0.00 0.00 0.00 3.01
754 766 6.652900 AGACAAGCCTTTTCTTATGAGTTCTC 59.347 38.462 0.00 0.00 0.00 2.87
755 767 6.538263 ACAAGCCTTTTCTTATGAGTTCTCT 58.462 36.000 1.53 0.00 0.00 3.10
756 768 6.652900 ACAAGCCTTTTCTTATGAGTTCTCTC 59.347 38.462 1.53 0.00 40.79 3.20
757 769 6.619329 AGCCTTTTCTTATGAGTTCTCTCT 57.381 37.500 1.53 0.00 40.98 3.10
758 770 6.639563 AGCCTTTTCTTATGAGTTCTCTCTC 58.360 40.000 1.53 0.00 40.98 3.20
759 771 5.815222 GCCTTTTCTTATGAGTTCTCTCTCC 59.185 44.000 1.53 0.00 40.98 3.71
760 772 6.351796 GCCTTTTCTTATGAGTTCTCTCTCCT 60.352 42.308 1.53 0.00 40.98 3.69
761 773 7.264947 CCTTTTCTTATGAGTTCTCTCTCCTC 58.735 42.308 1.53 0.00 40.98 3.71
762 774 6.783708 TTTCTTATGAGTTCTCTCTCCTCC 57.216 41.667 1.53 0.00 40.98 4.30
763 775 5.458451 TCTTATGAGTTCTCTCTCCTCCA 57.542 43.478 1.53 0.00 40.98 3.86
764 776 5.197451 TCTTATGAGTTCTCTCTCCTCCAC 58.803 45.833 1.53 0.00 40.98 4.02
765 777 2.980246 TGAGTTCTCTCTCCTCCACA 57.020 50.000 1.53 0.00 40.98 4.17
766 778 3.464720 TGAGTTCTCTCTCCTCCACAT 57.535 47.619 1.53 0.00 40.98 3.21
767 779 3.360867 TGAGTTCTCTCTCCTCCACATC 58.639 50.000 1.53 0.00 40.98 3.06
768 780 3.245407 TGAGTTCTCTCTCCTCCACATCA 60.245 47.826 1.53 0.00 40.98 3.07
769 781 3.960102 GAGTTCTCTCTCCTCCACATCAT 59.040 47.826 0.00 0.00 37.68 2.45
770 782 3.960102 AGTTCTCTCTCCTCCACATCATC 59.040 47.826 0.00 0.00 0.00 2.92
771 783 3.677156 TCTCTCTCCTCCACATCATCA 57.323 47.619 0.00 0.00 0.00 3.07
772 784 4.196118 TCTCTCTCCTCCACATCATCAT 57.804 45.455 0.00 0.00 0.00 2.45
773 785 4.554683 TCTCTCTCCTCCACATCATCATT 58.445 43.478 0.00 0.00 0.00 2.57
774 786 4.967442 TCTCTCTCCTCCACATCATCATTT 59.033 41.667 0.00 0.00 0.00 2.32
775 787 6.138967 TCTCTCTCCTCCACATCATCATTTA 58.861 40.000 0.00 0.00 0.00 1.40
776 788 6.786461 TCTCTCTCCTCCACATCATCATTTAT 59.214 38.462 0.00 0.00 0.00 1.40
777 789 7.002250 TCTCTCCTCCACATCATCATTTATC 57.998 40.000 0.00 0.00 0.00 1.75
778 790 6.013898 TCTCTCCTCCACATCATCATTTATCC 60.014 42.308 0.00 0.00 0.00 2.59
779 791 5.848369 TCTCCTCCACATCATCATTTATCCT 59.152 40.000 0.00 0.00 0.00 3.24
780 792 7.018769 TCTCCTCCACATCATCATTTATCCTA 58.981 38.462 0.00 0.00 0.00 2.94
781 793 7.681598 TCTCCTCCACATCATCATTTATCCTAT 59.318 37.037 0.00 0.00 0.00 2.57
782 794 7.627311 TCCTCCACATCATCATTTATCCTATG 58.373 38.462 0.00 0.00 0.00 2.23
783 795 7.238305 TCCTCCACATCATCATTTATCCTATGT 59.762 37.037 0.00 0.00 0.00 2.29
784 796 7.336176 CCTCCACATCATCATTTATCCTATGTG 59.664 40.741 0.00 0.00 41.35 3.21
786 798 6.849502 CACATCATCATTTATCCTATGTGGC 58.150 40.000 0.00 0.00 39.19 5.01
787 799 6.431852 CACATCATCATTTATCCTATGTGGCA 59.568 38.462 0.00 0.00 39.19 4.92
788 800 6.432162 ACATCATCATTTATCCTATGTGGCAC 59.568 38.462 11.55 11.55 35.26 5.01
789 801 6.191657 TCATCATTTATCCTATGTGGCACT 57.808 37.500 19.83 6.99 35.26 4.40
790 802 6.233434 TCATCATTTATCCTATGTGGCACTC 58.767 40.000 19.83 0.00 35.26 3.51
791 803 5.894298 TCATTTATCCTATGTGGCACTCT 57.106 39.130 19.83 8.78 35.26 3.24
792 804 6.252599 TCATTTATCCTATGTGGCACTCTT 57.747 37.500 19.83 6.37 35.26 2.85
793 805 7.373617 TCATTTATCCTATGTGGCACTCTTA 57.626 36.000 19.83 7.20 35.26 2.10
794 806 7.801104 TCATTTATCCTATGTGGCACTCTTAA 58.199 34.615 19.83 0.00 35.26 1.85
795 807 7.933577 TCATTTATCCTATGTGGCACTCTTAAG 59.066 37.037 19.83 8.46 35.26 1.85
796 808 7.432148 TTTATCCTATGTGGCACTCTTAAGA 57.568 36.000 19.83 4.81 35.26 2.10
797 809 7.618019 TTATCCTATGTGGCACTCTTAAGAT 57.382 36.000 19.83 14.50 35.26 2.40
798 810 8.721133 TTATCCTATGTGGCACTCTTAAGATA 57.279 34.615 19.83 13.60 35.26 1.98
799 811 6.656632 TCCTATGTGGCACTCTTAAGATAG 57.343 41.667 19.83 14.18 35.26 2.08
800 812 5.011125 TCCTATGTGGCACTCTTAAGATAGC 59.989 44.000 19.83 16.75 35.26 2.97
801 813 4.760530 ATGTGGCACTCTTAAGATAGCA 57.239 40.909 19.83 11.10 0.00 3.49
802 814 3.861840 TGTGGCACTCTTAAGATAGCAC 58.138 45.455 19.83 19.15 0.00 4.40
803 815 3.198872 GTGGCACTCTTAAGATAGCACC 58.801 50.000 22.91 13.98 0.00 5.01
804 816 2.837591 TGGCACTCTTAAGATAGCACCA 59.162 45.455 22.91 15.80 0.00 4.17
805 817 3.455910 TGGCACTCTTAAGATAGCACCAT 59.544 43.478 22.91 0.00 0.00 3.55
806 818 4.080356 TGGCACTCTTAAGATAGCACCATT 60.080 41.667 22.91 0.00 0.00 3.16
807 819 4.274459 GGCACTCTTAAGATAGCACCATTG 59.726 45.833 22.91 5.79 0.00 2.82
808 820 4.878397 GCACTCTTAAGATAGCACCATTGT 59.122 41.667 18.96 3.41 0.00 2.71
809 821 6.049149 GCACTCTTAAGATAGCACCATTGTA 58.951 40.000 18.96 0.00 0.00 2.41
810 822 6.018669 GCACTCTTAAGATAGCACCATTGTAC 60.019 42.308 18.96 0.00 0.00 2.90
811 823 7.041721 CACTCTTAAGATAGCACCATTGTACA 58.958 38.462 5.44 0.00 0.00 2.90
812 824 7.712639 CACTCTTAAGATAGCACCATTGTACAT 59.287 37.037 5.44 0.00 0.00 2.29
813 825 7.712639 ACTCTTAAGATAGCACCATTGTACATG 59.287 37.037 5.44 0.00 0.00 3.21
814 826 6.483307 TCTTAAGATAGCACCATTGTACATGC 59.517 38.462 10.53 10.53 38.39 4.06
815 827 3.480470 AGATAGCACCATTGTACATGCC 58.520 45.455 14.08 1.71 38.92 4.40
816 828 2.051334 TAGCACCATTGTACATGCCC 57.949 50.000 14.08 0.00 38.92 5.36
817 829 0.332632 AGCACCATTGTACATGCCCT 59.667 50.000 14.08 0.00 38.92 5.19
818 830 1.563879 AGCACCATTGTACATGCCCTA 59.436 47.619 14.08 0.00 38.92 3.53
819 831 2.025416 AGCACCATTGTACATGCCCTAA 60.025 45.455 14.08 0.00 38.92 2.69
820 832 2.757868 GCACCATTGTACATGCCCTAAA 59.242 45.455 7.77 0.00 31.71 1.85
821 833 3.384467 GCACCATTGTACATGCCCTAAAT 59.616 43.478 7.77 0.00 31.71 1.40
822 834 4.499696 GCACCATTGTACATGCCCTAAATC 60.500 45.833 7.77 0.00 31.71 2.17
823 835 4.644234 CACCATTGTACATGCCCTAAATCA 59.356 41.667 0.00 0.00 0.00 2.57
824 836 4.644685 ACCATTGTACATGCCCTAAATCAC 59.355 41.667 0.00 0.00 0.00 3.06
825 837 4.037923 CCATTGTACATGCCCTAAATCACC 59.962 45.833 0.00 0.00 0.00 4.02
826 838 4.584638 TTGTACATGCCCTAAATCACCT 57.415 40.909 0.00 0.00 0.00 4.00
827 839 4.584638 TGTACATGCCCTAAATCACCTT 57.415 40.909 0.00 0.00 0.00 3.50
828 840 5.702065 TGTACATGCCCTAAATCACCTTA 57.298 39.130 0.00 0.00 0.00 2.69
829 841 5.433526 TGTACATGCCCTAAATCACCTTAC 58.566 41.667 0.00 0.00 0.00 2.34
830 842 3.541632 ACATGCCCTAAATCACCTTACG 58.458 45.455 0.00 0.00 0.00 3.18
831 843 3.054655 ACATGCCCTAAATCACCTTACGT 60.055 43.478 0.00 0.00 0.00 3.57
832 844 3.706600 TGCCCTAAATCACCTTACGTT 57.293 42.857 0.00 0.00 0.00 3.99
833 845 3.340034 TGCCCTAAATCACCTTACGTTG 58.660 45.455 0.00 0.00 0.00 4.10
834 846 2.681344 GCCCTAAATCACCTTACGTTGG 59.319 50.000 0.00 0.00 0.00 3.77
835 847 3.620472 GCCCTAAATCACCTTACGTTGGA 60.620 47.826 13.21 0.00 0.00 3.53
836 848 4.189231 CCCTAAATCACCTTACGTTGGAG 58.811 47.826 13.21 6.38 0.00 3.86
837 849 4.323257 CCCTAAATCACCTTACGTTGGAGT 60.323 45.833 13.21 0.00 0.00 3.85
912 929 3.575687 CGGATAGGGATTACGGTTAAGGT 59.424 47.826 0.00 0.00 0.00 3.50
1015 5588 2.047830 CCGACCTTTATAAGCCCCTCT 58.952 52.381 0.00 0.00 0.00 3.69
1016 5589 3.236896 CCGACCTTTATAAGCCCCTCTA 58.763 50.000 0.00 0.00 0.00 2.43
1046 5624 4.868116 AAAGCACCCACGCACGGT 62.868 61.111 0.00 0.00 0.00 4.83
1177 5788 3.735029 GGAGTCGTCGACGCAGGT 61.735 66.667 32.19 16.11 37.67 4.00
1231 5842 2.975536 CTGCGGGTTCTACGGGAA 59.024 61.111 0.00 0.00 0.00 3.97
1270 5881 2.740714 GCTCAAAGTGCTACCGCGG 61.741 63.158 26.86 26.86 39.65 6.46
1332 5952 0.173708 GAAGATCAAGGCCGACGACT 59.826 55.000 0.00 0.00 0.00 4.18
1334 5954 0.108615 AGATCAAGGCCGACGACTTG 60.109 55.000 19.64 19.64 44.09 3.16
1633 6268 2.598637 TCGACAAGATTTGAAGATCGCG 59.401 45.455 0.00 0.00 0.00 5.87
1818 7830 3.570975 GTGTCTTGTTATTTTTCCCGGGT 59.429 43.478 22.86 2.31 0.00 5.28
1843 7855 6.665695 TGAATCCATGAGAATTCAATCCTCA 58.334 36.000 8.44 2.44 40.68 3.86
1845 7857 7.447545 TGAATCCATGAGAATTCAATCCTCATC 59.552 37.037 8.44 0.00 43.49 2.92
1888 7915 9.199982 CAATTTTGCAGTTTTCATACAAGAGAT 57.800 29.630 0.00 0.00 0.00 2.75
1891 7918 7.750229 TTGCAGTTTTCATACAAGAGATTCT 57.250 32.000 0.00 0.00 0.00 2.40
1893 7920 6.026513 GCAGTTTTCATACAAGAGATTCTGC 58.973 40.000 0.00 0.00 37.00 4.26
1901 7928 6.936335 TCATACAAGAGATTCTGCAGTTTTCA 59.064 34.615 14.67 0.00 0.00 2.69
1928 7955 5.883673 AGTTCTGACATAGACCTAGTCACTC 59.116 44.000 0.00 0.00 37.36 3.51
1934 7961 8.397575 TGACATAGACCTAGTCACTCATAATC 57.602 38.462 0.00 0.00 37.36 1.75
2030 8186 8.146053 TCCAAGATTAATCATCCACGGTATAT 57.854 34.615 17.56 0.00 31.20 0.86
2068 8224 6.109359 GGTTTACTAGAGACATCATTGCACT 58.891 40.000 0.00 0.00 0.00 4.40
2107 8263 5.365619 TCTTCCTCCTTGTTTGTAGTTGTC 58.634 41.667 0.00 0.00 0.00 3.18
2175 8592 9.930693 CTTATACATAAGTGAGGAAGGTAATCC 57.069 37.037 1.50 0.00 36.48 3.01
2179 8596 7.112779 ACATAAGTGAGGAAGGTAATCCAAAG 58.887 38.462 0.00 0.00 42.27 2.77
2197 8614 4.224818 CCAAAGAGAGAGAAGATGGGTTCT 59.775 45.833 0.00 0.00 39.59 3.01
2251 8669 7.937942 AGATGAAGTCCAAGATCCTCATTATTG 59.062 37.037 0.00 0.00 0.00 1.90
2304 9469 1.754803 CGCTACACAAGGGATCCTACA 59.245 52.381 12.58 0.00 40.56 2.74
2344 9509 8.762645 AGAGAATGAGACCATGAGTATAAAACA 58.237 33.333 0.00 0.00 32.36 2.83
2406 9571 5.659079 ACTTCAGGTTGGGAGTAATCTCTAG 59.341 44.000 0.00 0.00 40.29 2.43
2514 9679 3.527533 TGAAATGCGTATAAAGCCGTCT 58.472 40.909 0.00 0.00 0.00 4.18
2516 9681 2.882927 ATGCGTATAAAGCCGTCTGA 57.117 45.000 0.00 0.00 0.00 3.27
2531 9700 1.819903 GTCTGAGTTTCTAGGGAGCGT 59.180 52.381 0.00 0.00 0.00 5.07
2537 9706 0.685097 TTTCTAGGGAGCGTGCAAGT 59.315 50.000 0.59 0.00 0.00 3.16
2542 9711 2.343758 GGAGCGTGCAAGTCCTCA 59.656 61.111 11.83 0.00 0.00 3.86
2545 9714 0.235926 GAGCGTGCAAGTCCTCAAAC 59.764 55.000 0.59 0.00 0.00 2.93
2558 9727 3.879892 GTCCTCAAACTCAGAAACTGCTT 59.120 43.478 0.00 0.00 0.00 3.91
2572 9741 5.462068 AGAAACTGCTTCGTTTAAAATTGGC 59.538 36.000 0.00 0.00 39.22 4.52
2666 9835 5.276461 TGATATTGTCCGAGTAGTGCAAT 57.724 39.130 0.00 0.00 34.62 3.56
2774 10707 3.855689 AAGATTTTCGGCCAATCAGTG 57.144 42.857 14.77 0.00 33.67 3.66
2844 11868 5.977533 ACTGAGACCCTATTGGATGGTATA 58.022 41.667 0.00 0.00 38.00 1.47
3094 12402 6.150307 ACATGTGTTACAACTGTGAAGTTTGA 59.850 34.615 0.00 0.00 0.00 2.69
3109 12417 4.566545 AGTTTGATGTGCGTTTGAATGA 57.433 36.364 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.539438 TGCATTTCCGCTTCAAGGGT 60.539 50.000 0.10 0.00 0.00 4.34
144 145 5.244851 GTCAAGATGACCATAGGCTGATCTA 59.755 44.000 0.00 0.00 41.37 1.98
145 146 4.040217 GTCAAGATGACCATAGGCTGATCT 59.960 45.833 0.00 0.00 41.37 2.75
156 157 1.256812 TCTCAGCGTCAAGATGACCA 58.743 50.000 5.00 0.00 44.20 4.02
181 182 4.349636 TGAACTCCCTAACATCCAAGTGAA 59.650 41.667 0.00 0.00 0.00 3.18
216 222 9.635404 GATGTGCTACCCTATTATACTCTCTAT 57.365 37.037 0.00 0.00 0.00 1.98
244 250 3.068560 GGTACGACTACAATGTGCCAAA 58.931 45.455 0.00 0.00 38.15 3.28
255 261 7.175641 ACCATACCACAATATAGGTACGACTAC 59.824 40.741 0.00 0.00 42.74 2.73
259 265 6.550481 TCAACCATACCACAATATAGGTACGA 59.450 38.462 0.00 0.00 42.74 3.43
285 297 8.562892 CAACATGAAAGACTTGAGTAGTTGAAT 58.437 33.333 0.00 0.00 37.17 2.57
286 298 7.552687 ACAACATGAAAGACTTGAGTAGTTGAA 59.447 33.333 19.12 0.00 37.17 2.69
287 299 7.011389 CACAACATGAAAGACTTGAGTAGTTGA 59.989 37.037 19.12 0.00 37.17 3.18
288 300 7.011389 TCACAACATGAAAGACTTGAGTAGTTG 59.989 37.037 0.00 14.22 33.38 3.16
289 301 7.047891 TCACAACATGAAAGACTTGAGTAGTT 58.952 34.615 0.00 0.00 33.38 2.24
290 302 6.582636 TCACAACATGAAAGACTTGAGTAGT 58.417 36.000 0.00 0.00 35.17 2.73
291 303 6.146837 CCTCACAACATGAAAGACTTGAGTAG 59.853 42.308 0.00 0.00 36.69 2.57
292 304 5.991606 CCTCACAACATGAAAGACTTGAGTA 59.008 40.000 0.00 0.00 36.69 2.59
297 309 3.817647 GCTCCTCACAACATGAAAGACTT 59.182 43.478 0.00 0.00 36.69 3.01
302 314 3.213206 ACTGCTCCTCACAACATGAAA 57.787 42.857 0.00 0.00 36.69 2.69
304 316 2.497138 CAACTGCTCCTCACAACATGA 58.503 47.619 0.00 0.00 35.45 3.07
319 331 0.250553 TTACAACCCCGAGCCAACTG 60.251 55.000 0.00 0.00 0.00 3.16
351 363 4.944317 CAGGGTGAAAGGAAGTTCTAATCC 59.056 45.833 2.25 0.00 35.88 3.01
352 364 4.396478 GCAGGGTGAAAGGAAGTTCTAATC 59.604 45.833 2.25 0.00 0.00 1.75
354 366 3.137544 TGCAGGGTGAAAGGAAGTTCTAA 59.862 43.478 2.25 0.00 0.00 2.10
357 369 1.981256 TGCAGGGTGAAAGGAAGTTC 58.019 50.000 0.00 0.00 0.00 3.01
360 372 3.817709 TTTTTGCAGGGTGAAAGGAAG 57.182 42.857 0.00 0.00 0.00 3.46
384 396 6.039493 ACTCGTTCTGTGATATCCGAAATAGT 59.961 38.462 0.00 5.18 0.00 2.12
391 403 3.372954 GGAACTCGTTCTGTGATATCCG 58.627 50.000 9.41 0.00 39.45 4.18
413 425 2.483889 GCTTCCTTGTCCCTATCCGAAG 60.484 54.545 0.00 0.00 0.00 3.79
414 426 1.485066 GCTTCCTTGTCCCTATCCGAA 59.515 52.381 0.00 0.00 0.00 4.30
415 427 1.120530 GCTTCCTTGTCCCTATCCGA 58.879 55.000 0.00 0.00 0.00 4.55
416 428 0.106894 GGCTTCCTTGTCCCTATCCG 59.893 60.000 0.00 0.00 0.00 4.18
417 429 0.106894 CGGCTTCCTTGTCCCTATCC 59.893 60.000 0.00 0.00 0.00 2.59
418 430 1.120530 TCGGCTTCCTTGTCCCTATC 58.879 55.000 0.00 0.00 0.00 2.08
419 431 1.580059 TTCGGCTTCCTTGTCCCTAT 58.420 50.000 0.00 0.00 0.00 2.57
420 432 1.354101 TTTCGGCTTCCTTGTCCCTA 58.646 50.000 0.00 0.00 0.00 3.53
421 433 0.476771 TTTTCGGCTTCCTTGTCCCT 59.523 50.000 0.00 0.00 0.00 4.20
422 434 1.269723 CTTTTTCGGCTTCCTTGTCCC 59.730 52.381 0.00 0.00 0.00 4.46
423 435 1.335964 GCTTTTTCGGCTTCCTTGTCC 60.336 52.381 0.00 0.00 0.00 4.02
424 436 1.335964 GGCTTTTTCGGCTTCCTTGTC 60.336 52.381 0.00 0.00 0.00 3.18
425 437 0.673985 GGCTTTTTCGGCTTCCTTGT 59.326 50.000 0.00 0.00 0.00 3.16
426 438 0.673437 TGGCTTTTTCGGCTTCCTTG 59.327 50.000 0.00 0.00 0.00 3.61
427 439 1.632589 ATGGCTTTTTCGGCTTCCTT 58.367 45.000 0.00 0.00 0.00 3.36
428 440 1.273327 CAATGGCTTTTTCGGCTTCCT 59.727 47.619 0.00 0.00 0.00 3.36
429 441 1.713597 CAATGGCTTTTTCGGCTTCC 58.286 50.000 0.00 0.00 0.00 3.46
430 442 1.070821 GCAATGGCTTTTTCGGCTTC 58.929 50.000 0.00 0.00 36.96 3.86
431 443 0.667184 CGCAATGGCTTTTTCGGCTT 60.667 50.000 0.00 0.00 38.10 4.35
432 444 1.080569 CGCAATGGCTTTTTCGGCT 60.081 52.632 0.00 0.00 38.10 5.52
433 445 1.372872 ACGCAATGGCTTTTTCGGC 60.373 52.632 0.00 0.00 38.10 5.54
434 446 1.008361 CCACGCAATGGCTTTTTCGG 61.008 55.000 0.00 0.00 43.24 4.30
435 447 2.433637 CCACGCAATGGCTTTTTCG 58.566 52.632 0.00 3.92 43.24 3.46
444 456 2.095110 TGATCTTTGAAGCCACGCAATG 60.095 45.455 0.00 0.00 0.00 2.82
445 457 2.161855 TGATCTTTGAAGCCACGCAAT 58.838 42.857 0.00 0.00 0.00 3.56
446 458 1.603456 TGATCTTTGAAGCCACGCAA 58.397 45.000 0.00 0.00 0.00 4.85
447 459 1.266718 GTTGATCTTTGAAGCCACGCA 59.733 47.619 0.00 0.00 0.00 5.24
448 460 1.537202 AGTTGATCTTTGAAGCCACGC 59.463 47.619 0.00 0.00 0.00 5.34
449 461 4.245660 TCTAGTTGATCTTTGAAGCCACG 58.754 43.478 0.00 0.00 0.00 4.94
450 462 5.123027 CCTTCTAGTTGATCTTTGAAGCCAC 59.877 44.000 0.00 0.00 35.87 5.01
451 463 5.221925 ACCTTCTAGTTGATCTTTGAAGCCA 60.222 40.000 0.00 0.00 35.87 4.75
452 464 5.249420 ACCTTCTAGTTGATCTTTGAAGCC 58.751 41.667 0.00 0.00 35.87 4.35
453 465 6.652900 AGAACCTTCTAGTTGATCTTTGAAGC 59.347 38.462 0.00 0.00 35.87 3.86
468 480 2.427453 CCGCTTGCTCTAGAACCTTCTA 59.573 50.000 0.00 0.00 38.70 2.10
469 481 1.205893 CCGCTTGCTCTAGAACCTTCT 59.794 52.381 0.00 0.00 41.24 2.85
470 482 1.066787 ACCGCTTGCTCTAGAACCTTC 60.067 52.381 0.00 0.00 0.00 3.46
471 483 0.977395 ACCGCTTGCTCTAGAACCTT 59.023 50.000 0.00 0.00 0.00 3.50
472 484 0.533032 GACCGCTTGCTCTAGAACCT 59.467 55.000 0.00 0.00 0.00 3.50
473 485 0.802607 CGACCGCTTGCTCTAGAACC 60.803 60.000 0.00 0.00 0.00 3.62
474 486 0.170561 TCGACCGCTTGCTCTAGAAC 59.829 55.000 0.00 0.00 0.00 3.01
475 487 0.452184 CTCGACCGCTTGCTCTAGAA 59.548 55.000 0.00 0.00 0.00 2.10
476 488 1.377366 CCTCGACCGCTTGCTCTAGA 61.377 60.000 0.00 0.00 0.00 2.43
477 489 1.064946 CCTCGACCGCTTGCTCTAG 59.935 63.158 0.00 0.00 0.00 2.43
478 490 2.415608 CCCTCGACCGCTTGCTCTA 61.416 63.158 0.00 0.00 0.00 2.43
479 491 3.764466 CCCTCGACCGCTTGCTCT 61.764 66.667 0.00 0.00 0.00 4.09
480 492 4.821589 CCCCTCGACCGCTTGCTC 62.822 72.222 0.00 0.00 0.00 4.26
482 494 4.388499 TTCCCCTCGACCGCTTGC 62.388 66.667 0.00 0.00 0.00 4.01
483 495 1.961180 ATCTTCCCCTCGACCGCTTG 61.961 60.000 0.00 0.00 0.00 4.01
484 496 1.677637 GATCTTCCCCTCGACCGCTT 61.678 60.000 0.00 0.00 0.00 4.68
485 497 2.042843 ATCTTCCCCTCGACCGCT 60.043 61.111 0.00 0.00 0.00 5.52
486 498 1.956629 TTGATCTTCCCCTCGACCGC 61.957 60.000 0.00 0.00 0.00 5.68
487 499 0.103208 CTTGATCTTCCCCTCGACCG 59.897 60.000 0.00 0.00 0.00 4.79
488 500 1.196012 ACTTGATCTTCCCCTCGACC 58.804 55.000 0.00 0.00 0.00 4.79
489 501 3.025262 ACTACTTGATCTTCCCCTCGAC 58.975 50.000 0.00 0.00 0.00 4.20
490 502 3.288964 GACTACTTGATCTTCCCCTCGA 58.711 50.000 0.00 0.00 0.00 4.04
491 503 2.033550 CGACTACTTGATCTTCCCCTCG 59.966 54.545 0.00 0.00 0.00 4.63
492 504 2.362717 CCGACTACTTGATCTTCCCCTC 59.637 54.545 0.00 0.00 0.00 4.30
493 505 2.024273 TCCGACTACTTGATCTTCCCCT 60.024 50.000 0.00 0.00 0.00 4.79
494 506 2.385803 TCCGACTACTTGATCTTCCCC 58.614 52.381 0.00 0.00 0.00 4.81
495 507 5.509332 GGTTATCCGACTACTTGATCTTCCC 60.509 48.000 0.00 0.00 0.00 3.97
496 508 5.068723 TGGTTATCCGACTACTTGATCTTCC 59.931 44.000 0.00 0.00 36.30 3.46
497 509 6.145338 TGGTTATCCGACTACTTGATCTTC 57.855 41.667 0.00 0.00 36.30 2.87
498 510 6.540438 TTGGTTATCCGACTACTTGATCTT 57.460 37.500 0.00 0.00 36.30 2.40
499 511 6.540438 TTTGGTTATCCGACTACTTGATCT 57.460 37.500 0.00 0.00 36.30 2.75
500 512 7.787725 ATTTTGGTTATCCGACTACTTGATC 57.212 36.000 0.00 0.00 36.30 2.92
501 513 7.067008 CCAATTTTGGTTATCCGACTACTTGAT 59.933 37.037 0.95 0.00 43.43 2.57
502 514 6.373216 CCAATTTTGGTTATCCGACTACTTGA 59.627 38.462 0.95 0.00 43.43 3.02
503 515 6.551736 CCAATTTTGGTTATCCGACTACTTG 58.448 40.000 0.95 0.00 43.43 3.16
504 516 6.753107 CCAATTTTGGTTATCCGACTACTT 57.247 37.500 0.95 0.00 43.43 2.24
518 530 1.535015 ACGTTGCGTGACCAATTTTGG 60.535 47.619 7.79 7.79 46.08 3.28
519 531 1.778591 GACGTTGCGTGACCAATTTTG 59.221 47.619 0.00 0.00 41.37 2.44
520 532 1.595976 CGACGTTGCGTGACCAATTTT 60.596 47.619 0.00 0.00 41.37 1.82
521 533 0.041663 CGACGTTGCGTGACCAATTT 60.042 50.000 0.00 0.00 41.37 1.82
522 534 1.567537 CGACGTTGCGTGACCAATT 59.432 52.632 0.00 0.00 41.37 2.32
523 535 2.950172 GCGACGTTGCGTGACCAAT 61.950 57.895 12.96 0.00 41.37 3.16
524 536 2.680693 TAGCGACGTTGCGTGACCAA 62.681 55.000 21.74 0.67 41.37 3.67
525 537 2.680693 TTAGCGACGTTGCGTGACCA 62.681 55.000 21.74 2.04 41.37 4.02
526 538 1.941476 CTTAGCGACGTTGCGTGACC 61.941 60.000 21.74 0.00 41.37 4.02
527 539 1.411089 CTTAGCGACGTTGCGTGAC 59.589 57.895 21.74 0.00 41.37 3.67
528 540 1.731613 CCTTAGCGACGTTGCGTGA 60.732 57.895 21.74 8.93 41.37 4.35
529 541 2.726691 CCCTTAGCGACGTTGCGTG 61.727 63.158 21.74 14.86 41.37 5.34
530 542 2.431942 CCCTTAGCGACGTTGCGT 60.432 61.111 21.74 12.69 45.10 5.24
531 543 3.849953 GCCCTTAGCGACGTTGCG 61.850 66.667 21.74 7.24 40.67 4.85
540 552 2.654863 ACCATTGTACATGCCCTTAGC 58.345 47.619 0.00 0.00 44.14 3.09
541 553 4.269183 TCAACCATTGTACATGCCCTTAG 58.731 43.478 0.00 0.00 0.00 2.18
542 554 4.308526 TCAACCATTGTACATGCCCTTA 57.691 40.909 0.00 0.00 0.00 2.69
543 555 3.168035 TCAACCATTGTACATGCCCTT 57.832 42.857 0.00 0.00 0.00 3.95
544 556 2.897271 TCAACCATTGTACATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
545 557 4.037923 CCTTATCAACCATTGTACATGCCC 59.962 45.833 0.00 0.00 0.00 5.36
546 558 4.644685 ACCTTATCAACCATTGTACATGCC 59.355 41.667 0.00 0.00 0.00 4.40
547 559 5.835113 ACCTTATCAACCATTGTACATGC 57.165 39.130 0.00 0.00 0.00 4.06
548 560 7.987458 AGACTACCTTATCAACCATTGTACATG 59.013 37.037 0.00 0.00 0.00 3.21
549 561 8.090788 AGACTACCTTATCAACCATTGTACAT 57.909 34.615 0.00 0.00 0.00 2.29
550 562 7.490657 AGACTACCTTATCAACCATTGTACA 57.509 36.000 0.00 0.00 0.00 2.90
564 576 9.251440 TGCAAGACTTAAGATAAGACTACCTTA 57.749 33.333 10.09 0.00 41.23 2.69
565 577 8.135382 TGCAAGACTTAAGATAAGACTACCTT 57.865 34.615 10.09 0.00 38.87 3.50
566 578 7.719871 TGCAAGACTTAAGATAAGACTACCT 57.280 36.000 10.09 0.00 0.00 3.08
567 579 7.982354 ACATGCAAGACTTAAGATAAGACTACC 59.018 37.037 10.09 0.31 0.00 3.18
568 580 8.934507 ACATGCAAGACTTAAGATAAGACTAC 57.065 34.615 10.09 1.43 0.00 2.73
582 594 9.836864 TGTCATATCTAAATTACATGCAAGACT 57.163 29.630 0.00 0.00 0.00 3.24
611 623 6.784031 AGATGACCCATTGTAGACTCTTTTT 58.216 36.000 0.00 0.00 0.00 1.94
612 624 6.214412 AGAGATGACCCATTGTAGACTCTTTT 59.786 38.462 0.00 0.00 30.66 2.27
613 625 5.723887 AGAGATGACCCATTGTAGACTCTTT 59.276 40.000 0.00 0.00 30.66 2.52
614 626 5.276440 AGAGATGACCCATTGTAGACTCTT 58.724 41.667 0.00 0.00 30.66 2.85
615 627 4.877773 AGAGATGACCCATTGTAGACTCT 58.122 43.478 0.00 0.00 0.00 3.24
616 628 5.606348 AAGAGATGACCCATTGTAGACTC 57.394 43.478 0.00 0.00 0.00 3.36
617 629 5.069781 GCTAAGAGATGACCCATTGTAGACT 59.930 44.000 0.00 0.00 0.00 3.24
618 630 5.293560 GCTAAGAGATGACCCATTGTAGAC 58.706 45.833 0.00 0.00 0.00 2.59
619 631 4.345257 GGCTAAGAGATGACCCATTGTAGA 59.655 45.833 0.00 0.00 0.00 2.59
620 632 4.346418 AGGCTAAGAGATGACCCATTGTAG 59.654 45.833 0.00 0.00 0.00 2.74
621 633 4.298626 AGGCTAAGAGATGACCCATTGTA 58.701 43.478 0.00 0.00 0.00 2.41
622 634 3.118531 AGGCTAAGAGATGACCCATTGT 58.881 45.455 0.00 0.00 0.00 2.71
623 635 3.853355 AGGCTAAGAGATGACCCATTG 57.147 47.619 0.00 0.00 0.00 2.82
624 636 5.848921 AGATAAGGCTAAGAGATGACCCATT 59.151 40.000 0.00 0.00 0.00 3.16
625 637 5.410602 AGATAAGGCTAAGAGATGACCCAT 58.589 41.667 0.00 0.00 0.00 4.00
626 638 4.820775 AGATAAGGCTAAGAGATGACCCA 58.179 43.478 0.00 0.00 0.00 4.51
627 639 5.305644 TGAAGATAAGGCTAAGAGATGACCC 59.694 44.000 0.00 0.00 0.00 4.46
628 640 6.412362 TGAAGATAAGGCTAAGAGATGACC 57.588 41.667 0.00 0.00 0.00 4.02
629 641 9.988815 TTATTGAAGATAAGGCTAAGAGATGAC 57.011 33.333 0.00 0.00 0.00 3.06
630 642 9.988815 GTTATTGAAGATAAGGCTAAGAGATGA 57.011 33.333 0.00 0.00 0.00 2.92
631 643 9.995003 AGTTATTGAAGATAAGGCTAAGAGATG 57.005 33.333 0.00 0.00 0.00 2.90
639 651 9.771534 GAATGACTAGTTATTGAAGATAAGGCT 57.228 33.333 16.87 0.00 0.00 4.58
640 652 8.994170 GGAATGACTAGTTATTGAAGATAAGGC 58.006 37.037 16.87 0.00 0.00 4.35
652 664 9.975218 ACCACATTTTTAGGAATGACTAGTTAT 57.025 29.630 0.00 0.00 38.93 1.89
653 665 9.226606 CACCACATTTTTAGGAATGACTAGTTA 57.773 33.333 0.00 0.00 38.93 2.24
654 666 7.942341 TCACCACATTTTTAGGAATGACTAGTT 59.058 33.333 0.00 0.00 38.93 2.24
655 667 7.458397 TCACCACATTTTTAGGAATGACTAGT 58.542 34.615 0.00 0.00 38.93 2.57
656 668 7.824289 TCTCACCACATTTTTAGGAATGACTAG 59.176 37.037 4.76 0.00 38.93 2.57
657 669 7.606456 GTCTCACCACATTTTTAGGAATGACTA 59.394 37.037 4.76 0.00 38.93 2.59
658 670 6.431234 GTCTCACCACATTTTTAGGAATGACT 59.569 38.462 4.76 0.00 38.93 3.41
659 671 6.206634 TGTCTCACCACATTTTTAGGAATGAC 59.793 38.462 4.76 0.00 38.93 3.06
660 672 6.303054 TGTCTCACCACATTTTTAGGAATGA 58.697 36.000 4.76 0.00 38.93 2.57
661 673 6.573664 TGTCTCACCACATTTTTAGGAATG 57.426 37.500 0.00 0.00 41.64 2.67
662 674 9.479549 AATATGTCTCACCACATTTTTAGGAAT 57.520 29.630 0.00 0.00 38.07 3.01
663 675 8.739039 CAATATGTCTCACCACATTTTTAGGAA 58.261 33.333 0.00 0.00 38.07 3.36
664 676 7.888021 ACAATATGTCTCACCACATTTTTAGGA 59.112 33.333 0.00 0.00 38.07 2.94
665 677 7.970061 CACAATATGTCTCACCACATTTTTAGG 59.030 37.037 0.00 0.00 38.07 2.69
666 678 7.485913 GCACAATATGTCTCACCACATTTTTAG 59.514 37.037 0.00 0.00 38.07 1.85
667 679 7.176515 AGCACAATATGTCTCACCACATTTTTA 59.823 33.333 0.00 0.00 38.07 1.52
668 680 6.015180 AGCACAATATGTCTCACCACATTTTT 60.015 34.615 0.00 0.00 38.07 1.94
669 681 5.477984 AGCACAATATGTCTCACCACATTTT 59.522 36.000 0.00 0.00 38.07 1.82
670 682 5.012239 AGCACAATATGTCTCACCACATTT 58.988 37.500 0.00 0.00 38.07 2.32
671 683 4.592942 AGCACAATATGTCTCACCACATT 58.407 39.130 0.00 0.00 38.07 2.71
672 684 4.226427 AGCACAATATGTCTCACCACAT 57.774 40.909 0.00 0.00 40.28 3.21
673 685 3.701205 AGCACAATATGTCTCACCACA 57.299 42.857 0.00 0.00 0.00 4.17
674 686 5.419542 TCTTAGCACAATATGTCTCACCAC 58.580 41.667 0.00 0.00 0.00 4.16
675 687 5.422012 TCTCTTAGCACAATATGTCTCACCA 59.578 40.000 0.00 0.00 0.00 4.17
676 688 5.907207 TCTCTTAGCACAATATGTCTCACC 58.093 41.667 0.00 0.00 0.00 4.02
677 689 7.205992 TGATCTCTTAGCACAATATGTCTCAC 58.794 38.462 0.00 0.00 0.00 3.51
678 690 7.352079 TGATCTCTTAGCACAATATGTCTCA 57.648 36.000 0.00 0.00 0.00 3.27
679 691 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
680 692 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
681 693 8.464770 GAGATGATCTCTTAGCACAATATGTC 57.535 38.462 14.98 0.00 40.30 3.06
715 727 9.574516 AAAAGGCTTGTCTTCTCTTATTTAAGA 57.425 29.630 0.00 0.44 39.82 2.10
716 728 9.833182 GAAAAGGCTTGTCTTCTCTTATTTAAG 57.167 33.333 10.26 0.00 34.65 1.85
717 729 9.574516 AGAAAAGGCTTGTCTTCTCTTATTTAA 57.425 29.630 14.33 0.00 0.00 1.52
718 730 9.574516 AAGAAAAGGCTTGTCTTCTCTTATTTA 57.425 29.630 23.96 0.00 33.68 1.40
719 731 8.470657 AAGAAAAGGCTTGTCTTCTCTTATTT 57.529 30.769 23.96 2.07 33.68 1.40
720 732 9.746457 ATAAGAAAAGGCTTGTCTTCTCTTATT 57.254 29.630 30.86 11.70 40.94 1.40
721 733 9.171877 CATAAGAAAAGGCTTGTCTTCTCTTAT 57.828 33.333 30.86 18.17 42.82 1.73
722 734 8.375506 TCATAAGAAAAGGCTTGTCTTCTCTTA 58.624 33.333 30.86 16.85 39.30 2.10
723 735 7.227156 TCATAAGAAAAGGCTTGTCTTCTCTT 58.773 34.615 30.86 18.21 37.66 2.85
724 736 6.773638 TCATAAGAAAAGGCTTGTCTTCTCT 58.226 36.000 30.86 16.87 33.70 3.10
725 737 6.652900 ACTCATAAGAAAAGGCTTGTCTTCTC 59.347 38.462 30.86 8.39 33.70 2.87
726 738 6.538263 ACTCATAAGAAAAGGCTTGTCTTCT 58.462 36.000 30.86 21.01 33.70 2.85
727 739 6.809630 ACTCATAAGAAAAGGCTTGTCTTC 57.190 37.500 30.86 17.17 33.70 2.87
728 740 7.001073 AGAACTCATAAGAAAAGGCTTGTCTT 58.999 34.615 30.04 30.04 35.77 3.01
729 741 6.538263 AGAACTCATAAGAAAAGGCTTGTCT 58.462 36.000 14.33 14.33 0.00 3.41
730 742 6.652900 AGAGAACTCATAAGAAAAGGCTTGTC 59.347 38.462 9.51 9.51 0.00 3.18
731 743 6.538263 AGAGAACTCATAAGAAAAGGCTTGT 58.462 36.000 0.00 0.00 0.00 3.16
732 744 6.878389 AGAGAGAACTCATAAGAAAAGGCTTG 59.122 38.462 0.00 0.00 44.79 4.01
733 745 7.014988 AGAGAGAACTCATAAGAAAAGGCTT 57.985 36.000 0.00 0.00 44.79 4.35
734 746 6.351796 GGAGAGAGAACTCATAAGAAAAGGCT 60.352 42.308 4.64 0.00 44.79 4.58
735 747 5.815222 GGAGAGAGAACTCATAAGAAAAGGC 59.185 44.000 4.64 0.00 44.79 4.35
736 748 7.181569 AGGAGAGAGAACTCATAAGAAAAGG 57.818 40.000 4.64 0.00 44.79 3.11
737 749 7.093552 TGGAGGAGAGAGAACTCATAAGAAAAG 60.094 40.741 4.64 0.00 44.79 2.27
738 750 6.726299 TGGAGGAGAGAGAACTCATAAGAAAA 59.274 38.462 4.64 0.00 44.79 2.29
739 751 6.153680 GTGGAGGAGAGAGAACTCATAAGAAA 59.846 42.308 4.64 0.00 44.79 2.52
740 752 5.654650 GTGGAGGAGAGAGAACTCATAAGAA 59.345 44.000 4.64 0.00 44.79 2.52
741 753 5.197451 GTGGAGGAGAGAGAACTCATAAGA 58.803 45.833 4.64 0.00 44.79 2.10
742 754 4.952957 TGTGGAGGAGAGAGAACTCATAAG 59.047 45.833 4.64 0.00 44.79 1.73
743 755 4.935578 TGTGGAGGAGAGAGAACTCATAA 58.064 43.478 4.64 0.00 44.79 1.90
744 756 4.592997 TGTGGAGGAGAGAGAACTCATA 57.407 45.455 4.64 0.00 44.79 2.15
745 757 3.464720 TGTGGAGGAGAGAGAACTCAT 57.535 47.619 4.64 0.00 44.79 2.90
746 758 2.980246 TGTGGAGGAGAGAGAACTCA 57.020 50.000 4.64 0.00 44.79 3.41
747 759 3.360867 TGATGTGGAGGAGAGAGAACTC 58.639 50.000 0.00 0.00 42.90 3.01
748 760 3.464720 TGATGTGGAGGAGAGAGAACT 57.535 47.619 0.00 0.00 0.00 3.01
749 761 3.703556 TGATGATGTGGAGGAGAGAGAAC 59.296 47.826 0.00 0.00 0.00 3.01
750 762 3.986435 TGATGATGTGGAGGAGAGAGAA 58.014 45.455 0.00 0.00 0.00 2.87
751 763 3.677156 TGATGATGTGGAGGAGAGAGA 57.323 47.619 0.00 0.00 0.00 3.10
752 764 4.959560 AATGATGATGTGGAGGAGAGAG 57.040 45.455 0.00 0.00 0.00 3.20
753 765 6.013898 GGATAAATGATGATGTGGAGGAGAGA 60.014 42.308 0.00 0.00 0.00 3.10
754 766 6.013553 AGGATAAATGATGATGTGGAGGAGAG 60.014 42.308 0.00 0.00 0.00 3.20
755 767 5.848369 AGGATAAATGATGATGTGGAGGAGA 59.152 40.000 0.00 0.00 0.00 3.71
756 768 6.124316 AGGATAAATGATGATGTGGAGGAG 57.876 41.667 0.00 0.00 0.00 3.69
757 769 7.238305 ACATAGGATAAATGATGATGTGGAGGA 59.762 37.037 0.00 0.00 0.00 3.71
758 770 7.336176 CACATAGGATAAATGATGATGTGGAGG 59.664 40.741 0.00 0.00 39.19 4.30
759 771 8.265165 CACATAGGATAAATGATGATGTGGAG 57.735 38.462 0.00 0.00 39.19 3.86
762 774 6.431852 TGCCACATAGGATAAATGATGATGTG 59.568 38.462 0.00 0.00 41.37 3.21
763 775 6.432162 GTGCCACATAGGATAAATGATGATGT 59.568 38.462 0.00 0.00 41.22 3.06
764 776 6.657966 AGTGCCACATAGGATAAATGATGATG 59.342 38.462 0.00 0.00 41.22 3.07
765 777 6.787170 AGTGCCACATAGGATAAATGATGAT 58.213 36.000 0.00 0.00 41.22 2.45
766 778 6.043590 AGAGTGCCACATAGGATAAATGATGA 59.956 38.462 0.00 0.00 41.22 2.92
767 779 6.236409 AGAGTGCCACATAGGATAAATGATG 58.764 40.000 0.00 0.00 41.22 3.07
768 780 6.445451 AGAGTGCCACATAGGATAAATGAT 57.555 37.500 0.00 0.00 41.22 2.45
769 781 5.894298 AGAGTGCCACATAGGATAAATGA 57.106 39.130 0.00 0.00 41.22 2.57
770 782 7.933577 TCTTAAGAGTGCCACATAGGATAAATG 59.066 37.037 0.00 0.00 41.22 2.32
771 783 8.034313 TCTTAAGAGTGCCACATAGGATAAAT 57.966 34.615 0.00 0.00 41.22 1.40
772 784 7.432148 TCTTAAGAGTGCCACATAGGATAAA 57.568 36.000 0.00 0.00 41.22 1.40
773 785 7.618019 ATCTTAAGAGTGCCACATAGGATAA 57.382 36.000 11.53 0.00 41.22 1.75
774 786 7.093727 GCTATCTTAAGAGTGCCACATAGGATA 60.094 40.741 11.53 2.95 41.22 2.59
775 787 6.295575 GCTATCTTAAGAGTGCCACATAGGAT 60.296 42.308 11.53 1.94 41.22 3.24
776 788 5.011125 GCTATCTTAAGAGTGCCACATAGGA 59.989 44.000 11.53 0.00 41.22 2.94
777 789 5.221521 TGCTATCTTAAGAGTGCCACATAGG 60.222 44.000 21.91 0.00 41.84 2.57
778 790 5.694006 GTGCTATCTTAAGAGTGCCACATAG 59.306 44.000 21.91 12.89 0.00 2.23
779 791 5.453339 GGTGCTATCTTAAGAGTGCCACATA 60.453 44.000 21.91 7.37 0.00 2.29
780 792 4.446371 GTGCTATCTTAAGAGTGCCACAT 58.554 43.478 21.91 3.78 0.00 3.21
781 793 3.369471 GGTGCTATCTTAAGAGTGCCACA 60.369 47.826 21.91 8.80 0.00 4.17
782 794 3.198872 GGTGCTATCTTAAGAGTGCCAC 58.801 50.000 21.91 18.28 0.00 5.01
783 795 2.837591 TGGTGCTATCTTAAGAGTGCCA 59.162 45.455 21.91 16.44 0.00 4.92
784 796 3.543680 TGGTGCTATCTTAAGAGTGCC 57.456 47.619 21.91 14.67 0.00 5.01
785 797 4.878397 ACAATGGTGCTATCTTAAGAGTGC 59.122 41.667 19.50 19.50 0.00 4.40
786 798 7.041721 TGTACAATGGTGCTATCTTAAGAGTG 58.958 38.462 11.53 7.17 0.00 3.51
787 799 7.182817 TGTACAATGGTGCTATCTTAAGAGT 57.817 36.000 11.53 2.01 0.00 3.24
788 800 7.307632 GCATGTACAATGGTGCTATCTTAAGAG 60.308 40.741 11.53 0.00 34.85 2.85
789 801 6.483307 GCATGTACAATGGTGCTATCTTAAGA 59.517 38.462 7.82 7.82 34.85 2.10
790 802 6.293626 GGCATGTACAATGGTGCTATCTTAAG 60.294 42.308 16.47 0.00 37.70 1.85
791 803 5.530915 GGCATGTACAATGGTGCTATCTTAA 59.469 40.000 16.47 0.00 37.70 1.85
792 804 5.063204 GGCATGTACAATGGTGCTATCTTA 58.937 41.667 16.47 0.00 37.70 2.10
793 805 3.885297 GGCATGTACAATGGTGCTATCTT 59.115 43.478 16.47 0.00 37.70 2.40
794 806 3.480470 GGCATGTACAATGGTGCTATCT 58.520 45.455 16.47 0.00 37.70 1.98
795 807 2.554032 GGGCATGTACAATGGTGCTATC 59.446 50.000 16.47 3.12 37.70 2.08
796 808 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
797 809 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
798 810 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
799 811 2.051334 TAGGGCATGTACAATGGTGC 57.949 50.000 10.12 10.12 36.88 5.01
800 812 4.644234 TGATTTAGGGCATGTACAATGGTG 59.356 41.667 0.00 0.00 0.00 4.17
801 813 4.644685 GTGATTTAGGGCATGTACAATGGT 59.355 41.667 0.00 0.00 0.00 3.55
802 814 4.037923 GGTGATTTAGGGCATGTACAATGG 59.962 45.833 0.00 0.00 0.00 3.16
803 815 4.889409 AGGTGATTTAGGGCATGTACAATG 59.111 41.667 0.00 0.12 0.00 2.82
804 816 5.129368 AGGTGATTTAGGGCATGTACAAT 57.871 39.130 0.00 0.00 0.00 2.71
805 817 4.584638 AGGTGATTTAGGGCATGTACAA 57.415 40.909 0.00 0.00 0.00 2.41
806 818 4.584638 AAGGTGATTTAGGGCATGTACA 57.415 40.909 0.00 0.00 0.00 2.90
807 819 4.510340 CGTAAGGTGATTTAGGGCATGTAC 59.490 45.833 0.00 0.00 0.00 2.90
808 820 4.162698 ACGTAAGGTGATTTAGGGCATGTA 59.837 41.667 0.00 0.00 46.39 2.29
809 821 3.054655 ACGTAAGGTGATTTAGGGCATGT 60.055 43.478 0.00 0.00 46.39 3.21
810 822 3.541632 ACGTAAGGTGATTTAGGGCATG 58.458 45.455 0.00 0.00 46.39 4.06
811 823 3.926058 ACGTAAGGTGATTTAGGGCAT 57.074 42.857 0.00 0.00 46.39 4.40
812 824 3.706600 AACGTAAGGTGATTTAGGGCA 57.293 42.857 0.00 0.00 46.39 5.36
823 835 2.171027 TGTCCAAACTCCAACGTAAGGT 59.829 45.455 6.83 0.00 46.39 3.50
824 836 2.546789 GTGTCCAAACTCCAACGTAAGG 59.453 50.000 0.00 0.00 46.39 2.69
825 837 7.495050 GAGTAGTGTCCAAACTCCAACGTAAG 61.495 46.154 0.00 0.00 37.57 2.34
826 838 3.547054 AGTGTCCAAACTCCAACGTAA 57.453 42.857 0.00 0.00 0.00 3.18
827 839 3.638160 AGTAGTGTCCAAACTCCAACGTA 59.362 43.478 0.00 0.00 0.00 3.57
828 840 2.433239 AGTAGTGTCCAAACTCCAACGT 59.567 45.455 0.00 0.00 0.00 3.99
829 841 3.057734 GAGTAGTGTCCAAACTCCAACG 58.942 50.000 0.00 0.00 34.79 4.10
834 846 2.028020 CCCTGGAGTAGTGTCCAAACTC 60.028 54.545 0.00 0.00 46.29 3.01
835 847 1.978580 CCCTGGAGTAGTGTCCAAACT 59.021 52.381 0.00 0.00 46.29 2.66
836 848 1.697982 ACCCTGGAGTAGTGTCCAAAC 59.302 52.381 0.00 0.00 46.29 2.93
837 849 2.112279 ACCCTGGAGTAGTGTCCAAA 57.888 50.000 0.00 0.00 46.29 3.28
851 863 2.826725 GACCTCCTCCGATAATACCCTG 59.173 54.545 0.00 0.00 0.00 4.45
912 929 0.669318 CGCAGTGACCTTTTCGGCTA 60.669 55.000 0.00 0.00 35.61 3.93
1015 5588 0.394938 TGCTTTGTTGACGAGGCCTA 59.605 50.000 4.42 0.00 31.94 3.93
1016 5589 1.148273 TGCTTTGTTGACGAGGCCT 59.852 52.632 3.86 3.86 31.94 5.19
1046 5624 2.103143 CGCGTTTGTTGGTTGCCA 59.897 55.556 0.00 0.00 0.00 4.92
1047 5625 1.657181 CTCGCGTTTGTTGGTTGCC 60.657 57.895 5.77 0.00 0.00 4.52
1048 5626 0.040425 ATCTCGCGTTTGTTGGTTGC 60.040 50.000 5.77 0.00 0.00 4.17
1231 5842 0.957395 CATGCTCTTGGTTGCCTCGT 60.957 55.000 0.00 0.00 0.00 4.18
1332 5952 1.339055 CGTCTTGAAGGCCAGGATCAA 60.339 52.381 5.01 9.22 33.26 2.57
1334 5954 0.250513 ACGTCTTGAAGGCCAGGATC 59.749 55.000 5.01 0.00 33.26 3.36
1633 6268 0.809241 CATCGAGAGGGTTCTGCTGC 60.809 60.000 0.00 0.00 32.53 5.25
1647 6282 7.362662 ACGAGTAAACTAAAACTGTACATCGA 58.637 34.615 12.11 0.00 0.00 3.59
1818 7830 7.120716 TGAGGATTGAATTCTCATGGATTCAA 58.879 34.615 22.83 22.83 44.05 2.69
1843 7855 9.097257 CAAAATTGGCAATACGGAAAATAAGAT 57.903 29.630 14.05 0.00 0.00 2.40
1845 7857 7.148507 TGCAAAATTGGCAATACGGAAAATAAG 60.149 33.333 14.05 0.00 38.54 1.73
1888 7915 6.542005 TGTCAGAACTTATGAAAACTGCAGAA 59.458 34.615 23.35 0.55 0.00 3.02
1891 7918 6.882610 ATGTCAGAACTTATGAAAACTGCA 57.117 33.333 0.00 0.00 0.00 4.41
1893 7920 8.660373 GGTCTATGTCAGAACTTATGAAAACTG 58.340 37.037 0.00 0.00 38.04 3.16
1962 7989 8.062065 AGTTGACCATTGTTAAGAAAAGTGAA 57.938 30.769 0.00 0.00 0.00 3.18
2030 8186 4.023726 AGTAAACCCTCGCAATACCAAA 57.976 40.909 0.00 0.00 0.00 3.28
2068 8224 8.134202 AGGAGGAAGAAAGAAGAAAAACAAAA 57.866 30.769 0.00 0.00 0.00 2.44
2107 8263 3.611766 AATCTTACCACCGTCTTCAGG 57.388 47.619 0.00 0.00 0.00 3.86
2175 8592 5.419239 AGAACCCATCTTCTCTCTCTTTG 57.581 43.478 0.00 0.00 33.39 2.77
2197 8614 4.821805 CAGCTCCTAAGTGGAAACAAAGAA 59.178 41.667 0.00 0.00 45.63 2.52
2207 8624 0.459237 CTCGCACAGCTCCTAAGTGG 60.459 60.000 3.60 0.00 33.98 4.00
2219 8636 1.618343 TCTTGGACTTCATCTCGCACA 59.382 47.619 0.00 0.00 0.00 4.57
2265 8683 9.210426 GTGTAGCGTGATAAAATTGAATAAGTG 57.790 33.333 0.00 0.00 0.00 3.16
2304 9469 7.267128 GTCTCATTCTCTCATCAGTCTGAAAT 58.733 38.462 6.64 0.00 0.00 2.17
2364 9529 2.304092 AGTTGTATGAGCCCATGCATG 58.696 47.619 20.19 20.19 43.25 4.06
2365 9530 2.742428 AGTTGTATGAGCCCATGCAT 57.258 45.000 0.00 0.00 43.25 3.96
2366 9531 2.290832 TGAAGTTGTATGAGCCCATGCA 60.291 45.455 0.00 0.00 42.35 3.96
2367 9532 2.357009 CTGAAGTTGTATGAGCCCATGC 59.643 50.000 0.00 0.00 36.17 4.06
2406 9571 4.244862 CATGGGCTAACACCATTTTGTTC 58.755 43.478 0.00 0.00 46.25 3.18
2514 9679 0.246635 GCACGCTCCCTAGAAACTCA 59.753 55.000 0.00 0.00 0.00 3.41
2516 9681 0.685097 TTGCACGCTCCCTAGAAACT 59.315 50.000 0.00 0.00 0.00 2.66
2531 9700 3.558931 TTCTGAGTTTGAGGACTTGCA 57.441 42.857 0.00 0.00 0.00 4.08
2537 9706 3.845781 AGCAGTTTCTGAGTTTGAGGA 57.154 42.857 0.66 0.00 32.44 3.71
2542 9711 4.965119 AAACGAAGCAGTTTCTGAGTTT 57.035 36.364 0.66 4.71 39.90 2.66
2545 9714 7.096477 CCAATTTTAAACGAAGCAGTTTCTGAG 60.096 37.037 7.98 0.00 42.63 3.35
2558 9727 6.203145 GCTTTTAAAGGGCCAATTTTAAACGA 59.797 34.615 24.06 14.88 38.04 3.85
2572 9741 1.460504 GACCCGGAGCTTTTAAAGGG 58.539 55.000 0.73 6.44 44.17 3.95
2679 9848 1.133262 CCCCATCTGGCATCCTTCAAT 60.133 52.381 0.00 0.00 0.00 2.57
2681 9850 0.920763 ACCCCATCTGGCATCCTTCA 60.921 55.000 0.00 0.00 0.00 3.02
2844 11868 1.615384 GCACTTTGAGCAGGGGAGATT 60.615 52.381 0.00 0.00 0.00 2.40
2962 12268 5.181748 CCTTAGCAAGATCAAGCTGTAAGT 58.818 41.667 18.74 0.00 41.97 2.24
3094 12402 1.401931 GCTGCTCATTCAAACGCACAT 60.402 47.619 0.00 0.00 0.00 3.21
3109 12417 1.350351 AGAATGTCTCCAACAGCTGCT 59.650 47.619 15.27 0.00 42.37 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.