Multiple sequence alignment - TraesCS2B01G151900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G151900 | chr2B | 100.000 | 5386 | 0 | 0 | 1 | 5386 | 118628470 | 118633855 | 0.000000e+00 | 9947.0 |
1 | TraesCS2B01G151900 | chr2B | 79.741 | 617 | 115 | 9 | 29 | 639 | 764508435 | 764509047 | 6.400000e-119 | 438.0 |
2 | TraesCS2B01G151900 | chr2B | 95.167 | 269 | 13 | 0 | 5118 | 5386 | 118652357 | 118652625 | 4.990000e-115 | 425.0 |
3 | TraesCS2B01G151900 | chr2D | 95.519 | 2544 | 85 | 10 | 2583 | 5109 | 76872667 | 76875198 | 0.000000e+00 | 4039.0 |
4 | TraesCS2B01G151900 | chr2D | 95.232 | 1468 | 38 | 9 | 938 | 2389 | 76870802 | 76872253 | 0.000000e+00 | 2294.0 |
5 | TraesCS2B01G151900 | chr2D | 83.673 | 588 | 78 | 4 | 29 | 615 | 76868365 | 76868935 | 6.140000e-149 | 538.0 |
6 | TraesCS2B01G151900 | chr2D | 82.842 | 577 | 90 | 9 | 30 | 602 | 34986846 | 34987417 | 4.810000e-140 | 508.0 |
7 | TraesCS2B01G151900 | chr2D | 80.286 | 629 | 107 | 10 | 1 | 614 | 88403953 | 88404579 | 4.920000e-125 | 459.0 |
8 | TraesCS2B01G151900 | chr2D | 92.614 | 176 | 12 | 1 | 702 | 876 | 161367280 | 161367105 | 8.960000e-63 | 252.0 |
9 | TraesCS2B01G151900 | chr2D | 94.400 | 125 | 6 | 1 | 2461 | 2584 | 76872459 | 76872583 | 1.980000e-44 | 191.0 |
10 | TraesCS2B01G151900 | chr2D | 96.552 | 58 | 1 | 1 | 2380 | 2437 | 76872405 | 76872461 | 1.600000e-15 | 95.3 |
11 | TraesCS2B01G151900 | chr2A | 94.817 | 2219 | 85 | 9 | 2914 | 5109 | 77539264 | 77541475 | 0.000000e+00 | 3434.0 |
12 | TraesCS2B01G151900 | chr2A | 95.178 | 1887 | 51 | 14 | 927 | 2800 | 77537408 | 77539267 | 0.000000e+00 | 2944.0 |
13 | TraesCS2B01G151900 | chr6A | 85.794 | 1077 | 149 | 4 | 3319 | 4394 | 614162878 | 614161805 | 0.000000e+00 | 1138.0 |
14 | TraesCS2B01G151900 | chr6A | 82.119 | 302 | 48 | 3 | 1833 | 2134 | 614164789 | 614164494 | 2.490000e-63 | 254.0 |
15 | TraesCS2B01G151900 | chr6A | 81.092 | 238 | 33 | 6 | 1094 | 1325 | 614165729 | 614165498 | 4.290000e-41 | 180.0 |
16 | TraesCS2B01G151900 | chr6D | 85.821 | 1072 | 148 | 4 | 3312 | 4382 | 468057343 | 468056275 | 0.000000e+00 | 1134.0 |
17 | TraesCS2B01G151900 | chr6D | 85.701 | 1077 | 150 | 4 | 3319 | 4394 | 468096688 | 468095615 | 0.000000e+00 | 1133.0 |
18 | TraesCS2B01G151900 | chr6D | 85.582 | 1082 | 150 | 6 | 3312 | 4391 | 468168812 | 468167735 | 0.000000e+00 | 1129.0 |
19 | TraesCS2B01G151900 | chr6D | 82.263 | 654 | 105 | 7 | 1 | 644 | 393928156 | 393927504 | 6.100000e-154 | 555.0 |
20 | TraesCS2B01G151900 | chr6D | 78.971 | 680 | 119 | 14 | 3 | 665 | 409334423 | 409335095 | 4.950000e-120 | 442.0 |
21 | TraesCS2B01G151900 | chr6D | 84.437 | 302 | 41 | 3 | 1833 | 2134 | 468059034 | 468058739 | 5.280000e-75 | 292.0 |
22 | TraesCS2B01G151900 | chr6D | 77.056 | 462 | 95 | 8 | 1677 | 2134 | 468152487 | 468152033 | 6.920000e-64 | 255.0 |
23 | TraesCS2B01G151900 | chr6D | 80.887 | 293 | 49 | 5 | 1094 | 1382 | 468171302 | 468171013 | 1.950000e-54 | 224.0 |
24 | TraesCS2B01G151900 | chr6D | 78.730 | 315 | 51 | 10 | 1057 | 1363 | 468060797 | 468060491 | 4.260000e-46 | 196.0 |
25 | TraesCS2B01G151900 | chr6D | 83.750 | 160 | 24 | 2 | 1175 | 1333 | 29769076 | 29769234 | 3.360000e-32 | 150.0 |
26 | TraesCS2B01G151900 | chr6D | 75.232 | 323 | 70 | 10 | 1818 | 2135 | 1428984 | 1428667 | 1.560000e-30 | 145.0 |
27 | TraesCS2B01G151900 | chr6D | 78.333 | 240 | 34 | 7 | 1113 | 1352 | 468153201 | 468152980 | 7.270000e-29 | 139.0 |
28 | TraesCS2B01G151900 | chr6D | 78.065 | 155 | 24 | 6 | 2279 | 2431 | 34950638 | 34950492 | 7.430000e-14 | 89.8 |
29 | TraesCS2B01G151900 | chrUn | 85.087 | 1093 | 153 | 8 | 3310 | 4399 | 346081763 | 346080678 | 0.000000e+00 | 1107.0 |
30 | TraesCS2B01G151900 | chrUn | 85.714 | 1029 | 142 | 5 | 3374 | 4399 | 310899428 | 310900454 | 0.000000e+00 | 1081.0 |
31 | TraesCS2B01G151900 | chrUn | 77.056 | 462 | 95 | 8 | 1677 | 2134 | 216381723 | 216382177 | 6.920000e-64 | 255.0 |
32 | TraesCS2B01G151900 | chrUn | 74.958 | 591 | 127 | 13 | 1556 | 2134 | 211920601 | 211921182 | 8.960000e-63 | 252.0 |
33 | TraesCS2B01G151900 | chrUn | 80.417 | 240 | 38 | 5 | 1113 | 1352 | 216381000 | 216381230 | 1.990000e-39 | 174.0 |
34 | TraesCS2B01G151900 | chrUn | 76.038 | 313 | 68 | 5 | 1828 | 2135 | 51444015 | 51444325 | 7.220000e-34 | 156.0 |
35 | TraesCS2B01G151900 | chr6B | 84.963 | 1084 | 158 | 5 | 3319 | 4399 | 714340767 | 714339686 | 0.000000e+00 | 1094.0 |
36 | TraesCS2B01G151900 | chr6B | 74.156 | 770 | 148 | 32 | 1677 | 2435 | 714335942 | 714335213 | 6.870000e-69 | 272.0 |
37 | TraesCS2B01G151900 | chr6B | 74.916 | 594 | 128 | 13 | 1556 | 2137 | 714409475 | 714408891 | 8.960000e-63 | 252.0 |
38 | TraesCS2B01G151900 | chr6B | 82.128 | 235 | 33 | 5 | 1118 | 1352 | 714336660 | 714336435 | 5.510000e-45 | 193.0 |
39 | TraesCS2B01G151900 | chr5D | 82.234 | 546 | 84 | 11 | 74 | 614 | 84826398 | 84826935 | 4.920000e-125 | 459.0 |
40 | TraesCS2B01G151900 | chr7D | 81.734 | 542 | 94 | 5 | 76 | 614 | 98984895 | 98985434 | 1.060000e-121 | 448.0 |
41 | TraesCS2B01G151900 | chr1A | 96.629 | 267 | 9 | 0 | 5120 | 5386 | 266881087 | 266880821 | 1.380000e-120 | 444.0 |
42 | TraesCS2B01G151900 | chr1A | 95.880 | 267 | 11 | 0 | 5120 | 5386 | 382739579 | 382739313 | 2.980000e-117 | 433.0 |
43 | TraesCS2B01G151900 | chr7B | 79.167 | 624 | 113 | 12 | 27 | 644 | 470525537 | 470526149 | 3.000000e-112 | 416.0 |
44 | TraesCS2B01G151900 | chr7B | 92.884 | 267 | 19 | 0 | 5120 | 5386 | 105021696 | 105021962 | 6.540000e-104 | 388.0 |
45 | TraesCS2B01G151900 | chr7B | 96.237 | 186 | 5 | 2 | 702 | 885 | 15945318 | 15945133 | 2.440000e-78 | 303.0 |
46 | TraesCS2B01G151900 | chr7B | 96.237 | 186 | 5 | 2 | 702 | 885 | 15945774 | 15945589 | 2.440000e-78 | 303.0 |
47 | TraesCS2B01G151900 | chr7B | 96.216 | 185 | 5 | 2 | 702 | 885 | 15944946 | 15944763 | 8.770000e-78 | 302.0 |
48 | TraesCS2B01G151900 | chr7B | 96.216 | 185 | 5 | 2 | 702 | 885 | 15945131 | 15944948 | 8.770000e-78 | 302.0 |
49 | TraesCS2B01G151900 | chr7B | 94.565 | 184 | 8 | 2 | 700 | 881 | 4396356 | 4396173 | 3.180000e-72 | 283.0 |
50 | TraesCS2B01G151900 | chr7B | 94.565 | 184 | 9 | 1 | 703 | 885 | 15945959 | 15945776 | 3.180000e-72 | 283.0 |
51 | TraesCS2B01G151900 | chr3B | 94.086 | 186 | 9 | 2 | 699 | 882 | 736670496 | 736670681 | 1.140000e-71 | 281.0 |
52 | TraesCS2B01G151900 | chr3A | 93.548 | 186 | 10 | 2 | 699 | 882 | 12465770 | 12465955 | 5.310000e-70 | 276.0 |
53 | TraesCS2B01G151900 | chr5B | 82.036 | 167 | 28 | 2 | 1175 | 1340 | 623167152 | 623167317 | 2.020000e-29 | 141.0 |
54 | TraesCS2B01G151900 | chr1B | 81.208 | 149 | 26 | 2 | 2287 | 2434 | 22823894 | 22823747 | 9.480000e-23 | 119.0 |
55 | TraesCS2B01G151900 | chr1D | 76.617 | 201 | 43 | 3 | 1936 | 2135 | 2461404 | 2461207 | 2.050000e-19 | 108.0 |
56 | TraesCS2B01G151900 | chr1D | 73.667 | 300 | 68 | 9 | 1839 | 2136 | 5422297 | 5422587 | 7.380000e-19 | 106.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G151900 | chr2B | 118628470 | 118633855 | 5385 | False | 9947.000000 | 9947 | 100.000000 | 1 | 5386 | 1 | chr2B.!!$F1 | 5385 |
1 | TraesCS2B01G151900 | chr2B | 764508435 | 764509047 | 612 | False | 438.000000 | 438 | 79.741000 | 29 | 639 | 1 | chr2B.!!$F3 | 610 |
2 | TraesCS2B01G151900 | chr2D | 76868365 | 76875198 | 6833 | False | 1431.460000 | 4039 | 93.075200 | 29 | 5109 | 5 | chr2D.!!$F3 | 5080 |
3 | TraesCS2B01G151900 | chr2D | 34986846 | 34987417 | 571 | False | 508.000000 | 508 | 82.842000 | 30 | 602 | 1 | chr2D.!!$F1 | 572 |
4 | TraesCS2B01G151900 | chr2D | 88403953 | 88404579 | 626 | False | 459.000000 | 459 | 80.286000 | 1 | 614 | 1 | chr2D.!!$F2 | 613 |
5 | TraesCS2B01G151900 | chr2A | 77537408 | 77541475 | 4067 | False | 3189.000000 | 3434 | 94.997500 | 927 | 5109 | 2 | chr2A.!!$F1 | 4182 |
6 | TraesCS2B01G151900 | chr6A | 614161805 | 614165729 | 3924 | True | 524.000000 | 1138 | 83.001667 | 1094 | 4394 | 3 | chr6A.!!$R1 | 3300 |
7 | TraesCS2B01G151900 | chr6D | 468095615 | 468096688 | 1073 | True | 1133.000000 | 1133 | 85.701000 | 3319 | 4394 | 1 | chr6D.!!$R4 | 1075 |
8 | TraesCS2B01G151900 | chr6D | 468167735 | 468171302 | 3567 | True | 676.500000 | 1129 | 83.234500 | 1094 | 4391 | 2 | chr6D.!!$R7 | 3297 |
9 | TraesCS2B01G151900 | chr6D | 393927504 | 393928156 | 652 | True | 555.000000 | 555 | 82.263000 | 1 | 644 | 1 | chr6D.!!$R3 | 643 |
10 | TraesCS2B01G151900 | chr6D | 468056275 | 468060797 | 4522 | True | 540.666667 | 1134 | 82.996000 | 1057 | 4382 | 3 | chr6D.!!$R5 | 3325 |
11 | TraesCS2B01G151900 | chr6D | 409334423 | 409335095 | 672 | False | 442.000000 | 442 | 78.971000 | 3 | 665 | 1 | chr6D.!!$F2 | 662 |
12 | TraesCS2B01G151900 | chrUn | 346080678 | 346081763 | 1085 | True | 1107.000000 | 1107 | 85.087000 | 3310 | 4399 | 1 | chrUn.!!$R1 | 1089 |
13 | TraesCS2B01G151900 | chrUn | 310899428 | 310900454 | 1026 | False | 1081.000000 | 1081 | 85.714000 | 3374 | 4399 | 1 | chrUn.!!$F3 | 1025 |
14 | TraesCS2B01G151900 | chrUn | 211920601 | 211921182 | 581 | False | 252.000000 | 252 | 74.958000 | 1556 | 2134 | 1 | chrUn.!!$F2 | 578 |
15 | TraesCS2B01G151900 | chrUn | 216381000 | 216382177 | 1177 | False | 214.500000 | 255 | 78.736500 | 1113 | 2134 | 2 | chrUn.!!$F4 | 1021 |
16 | TraesCS2B01G151900 | chr6B | 714335213 | 714340767 | 5554 | True | 519.666667 | 1094 | 80.415667 | 1118 | 4399 | 3 | chr6B.!!$R2 | 3281 |
17 | TraesCS2B01G151900 | chr6B | 714408891 | 714409475 | 584 | True | 252.000000 | 252 | 74.916000 | 1556 | 2137 | 1 | chr6B.!!$R1 | 581 |
18 | TraesCS2B01G151900 | chr5D | 84826398 | 84826935 | 537 | False | 459.000000 | 459 | 82.234000 | 74 | 614 | 1 | chr5D.!!$F1 | 540 |
19 | TraesCS2B01G151900 | chr7D | 98984895 | 98985434 | 539 | False | 448.000000 | 448 | 81.734000 | 76 | 614 | 1 | chr7D.!!$F1 | 538 |
20 | TraesCS2B01G151900 | chr7B | 470525537 | 470526149 | 612 | False | 416.000000 | 416 | 79.167000 | 27 | 644 | 1 | chr7B.!!$F2 | 617 |
21 | TraesCS2B01G151900 | chr7B | 15944763 | 15945959 | 1196 | True | 298.600000 | 303 | 95.894200 | 702 | 885 | 5 | chr7B.!!$R2 | 183 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
654 | 676 | 0.036164 | TTTCATGACAGTGACCGGGG | 59.964 | 55.000 | 6.32 | 0.00 | 0.00 | 5.73 | F |
808 | 2620 | 0.324645 | CCCCACCCCCTGAAAATCAG | 60.325 | 60.000 | 0.32 | 0.32 | 43.91 | 2.90 | F |
2134 | 4993 | 0.751277 | CGCCAATGGATGCCAAGGTA | 60.751 | 55.000 | 2.05 | 0.00 | 36.95 | 3.08 | F |
2704 | 5904 | 2.040012 | CCTCTGGCCTCTGCATCATTAT | 59.960 | 50.000 | 3.32 | 0.00 | 40.13 | 1.28 | F |
2780 | 6377 | 2.090775 | AGGTGGATGGGGAAACAAACTT | 60.091 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2076 | 4935 | 0.675633 | AATGTTCCAAGCACCTGCAC | 59.324 | 50.000 | 0.00 | 0.00 | 45.16 | 4.57 | R |
2617 | 5817 | 2.950990 | AGGCGATAGATATTCCCCCT | 57.049 | 50.000 | 0.00 | 0.00 | 39.76 | 4.79 | R |
3097 | 6878 | 1.916181 | ACCCAGAACATCCGAGGATTT | 59.084 | 47.619 | 1.12 | 1.16 | 31.62 | 2.17 | R |
3834 | 8050 | 2.186826 | GCACACCCAAGTTGAGCGT | 61.187 | 57.895 | 3.87 | 0.00 | 0.00 | 5.07 | R |
4713 | 10757 | 1.644509 | AGGAGGGAAATTGCAAACCC | 58.355 | 50.000 | 23.44 | 23.44 | 42.36 | 4.11 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
45 | 52 | 2.809861 | CTTCCGCTGCCTCACATGGT | 62.810 | 60.000 | 0.00 | 0.00 | 0.00 | 3.55 |
55 | 62 | 2.281414 | CACATGGTGGGCACGTCA | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
71 | 78 | 3.974401 | CACGTCATGTCATGTTTTTGTCC | 59.026 | 43.478 | 12.54 | 0.00 | 0.00 | 4.02 |
105 | 112 | 4.254709 | TGTCCTGCTGCTTGGCGT | 62.255 | 61.111 | 0.00 | 0.00 | 34.52 | 5.68 |
368 | 376 | 2.625617 | GGATCTGGAGGTGAAGGACTCT | 60.626 | 54.545 | 0.00 | 0.00 | 34.22 | 3.24 |
379 | 387 | 1.260538 | AAGGACTCTGATCCGCTGCA | 61.261 | 55.000 | 0.00 | 0.00 | 44.22 | 4.41 |
429 | 437 | 4.408821 | GGTGAGCATGGGTGGCGA | 62.409 | 66.667 | 0.00 | 0.00 | 36.08 | 5.54 |
436 | 444 | 2.938798 | ATGGGTGGCGAAGGGGAA | 60.939 | 61.111 | 0.00 | 0.00 | 0.00 | 3.97 |
463 | 471 | 2.912956 | TGAAGTGGCTAGGATTTGGTCT | 59.087 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
571 | 580 | 2.092646 | TGTACGCCTCATATTTGGCCTT | 60.093 | 45.455 | 3.32 | 0.00 | 45.90 | 4.35 |
582 | 597 | 3.979501 | ATTTGGCCTTGATATGAGGGT | 57.020 | 42.857 | 3.32 | 0.00 | 34.75 | 4.34 |
583 | 598 | 2.734755 | TTGGCCTTGATATGAGGGTG | 57.265 | 50.000 | 3.32 | 0.00 | 34.75 | 4.61 |
584 | 599 | 0.183492 | TGGCCTTGATATGAGGGTGC | 59.817 | 55.000 | 3.32 | 0.00 | 34.75 | 5.01 |
588 | 605 | 1.134098 | CCTTGATATGAGGGTGCCGTT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
591 | 608 | 2.673258 | TGATATGAGGGTGCCGTTAGA | 58.327 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
627 | 644 | 2.031919 | TTTGCGACGCCCATCTGT | 59.968 | 55.556 | 18.69 | 0.00 | 0.00 | 3.41 |
654 | 676 | 0.036164 | TTTCATGACAGTGACCGGGG | 59.964 | 55.000 | 6.32 | 0.00 | 0.00 | 5.73 |
696 | 2508 | 2.190578 | GCCCGGCTGTAGATGCTT | 59.809 | 61.111 | 0.71 | 0.00 | 0.00 | 3.91 |
701 | 2513 | 2.549754 | CCCGGCTGTAGATGCTTTTATG | 59.450 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
703 | 2515 | 3.466836 | CGGCTGTAGATGCTTTTATGGA | 58.533 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
705 | 2517 | 4.199310 | GGCTGTAGATGCTTTTATGGACA | 58.801 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
758 | 2570 | 5.075493 | ACCTTACGAAGAGACTAAGTTGGA | 58.925 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
759 | 2571 | 5.183522 | ACCTTACGAAGAGACTAAGTTGGAG | 59.816 | 44.000 | 0.00 | 0.00 | 0.00 | 3.86 |
760 | 2572 | 5.415077 | CCTTACGAAGAGACTAAGTTGGAGA | 59.585 | 44.000 | 0.00 | 0.00 | 0.00 | 3.71 |
761 | 2573 | 6.095720 | CCTTACGAAGAGACTAAGTTGGAGAT | 59.904 | 42.308 | 0.00 | 0.00 | 0.00 | 2.75 |
762 | 2574 | 7.282675 | CCTTACGAAGAGACTAAGTTGGAGATA | 59.717 | 40.741 | 0.00 | 0.00 | 0.00 | 1.98 |
763 | 2575 | 8.749026 | TTACGAAGAGACTAAGTTGGAGATAT | 57.251 | 34.615 | 0.00 | 0.00 | 0.00 | 1.63 |
764 | 2576 | 7.648039 | ACGAAGAGACTAAGTTGGAGATATT | 57.352 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
765 | 2577 | 8.068892 | ACGAAGAGACTAAGTTGGAGATATTT | 57.931 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
766 | 2578 | 7.976734 | ACGAAGAGACTAAGTTGGAGATATTTG | 59.023 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
767 | 2579 | 8.191446 | CGAAGAGACTAAGTTGGAGATATTTGA | 58.809 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
770 | 2582 | 9.829507 | AGAGACTAAGTTGGAGATATTTGATTG | 57.170 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
771 | 2583 | 8.970859 | AGACTAAGTTGGAGATATTTGATTGG | 57.029 | 34.615 | 0.00 | 0.00 | 0.00 | 3.16 |
772 | 2584 | 8.772250 | AGACTAAGTTGGAGATATTTGATTGGA | 58.228 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
773 | 2585 | 9.396022 | GACTAAGTTGGAGATATTTGATTGGAA | 57.604 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
774 | 2586 | 9.753674 | ACTAAGTTGGAGATATTTGATTGGAAA | 57.246 | 29.630 | 0.00 | 0.00 | 0.00 | 3.13 |
804 | 2616 | 3.922364 | GGCCCCACCCCCTGAAAA | 61.922 | 66.667 | 0.00 | 0.00 | 0.00 | 2.29 |
805 | 2617 | 2.449777 | GCCCCACCCCCTGAAAAT | 59.550 | 61.111 | 0.00 | 0.00 | 0.00 | 1.82 |
806 | 2618 | 1.685765 | GCCCCACCCCCTGAAAATC | 60.686 | 63.158 | 0.00 | 0.00 | 0.00 | 2.17 |
807 | 2619 | 1.780327 | CCCCACCCCCTGAAAATCA | 59.220 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
808 | 2620 | 0.324645 | CCCCACCCCCTGAAAATCAG | 60.325 | 60.000 | 0.32 | 0.32 | 43.91 | 2.90 |
827 | 2639 | 3.307379 | GGGGGCTGATTAGTTAGCG | 57.693 | 57.895 | 0.00 | 0.00 | 40.78 | 4.26 |
828 | 2640 | 0.756903 | GGGGGCTGATTAGTTAGCGA | 59.243 | 55.000 | 0.00 | 0.00 | 40.78 | 4.93 |
829 | 2641 | 1.348036 | GGGGGCTGATTAGTTAGCGAT | 59.652 | 52.381 | 0.00 | 0.00 | 40.78 | 4.58 |
830 | 2642 | 2.417719 | GGGGCTGATTAGTTAGCGATG | 58.582 | 52.381 | 0.00 | 0.00 | 40.78 | 3.84 |
831 | 2643 | 2.417719 | GGGCTGATTAGTTAGCGATGG | 58.582 | 52.381 | 0.00 | 0.00 | 40.78 | 3.51 |
832 | 2644 | 2.037251 | GGGCTGATTAGTTAGCGATGGA | 59.963 | 50.000 | 0.00 | 0.00 | 40.78 | 3.41 |
833 | 2645 | 3.494398 | GGGCTGATTAGTTAGCGATGGAA | 60.494 | 47.826 | 0.00 | 0.00 | 40.78 | 3.53 |
834 | 2646 | 3.743396 | GGCTGATTAGTTAGCGATGGAAG | 59.257 | 47.826 | 0.00 | 0.00 | 40.78 | 3.46 |
835 | 2647 | 3.743396 | GCTGATTAGTTAGCGATGGAAGG | 59.257 | 47.826 | 0.00 | 0.00 | 0.00 | 3.46 |
836 | 2648 | 4.740934 | GCTGATTAGTTAGCGATGGAAGGT | 60.741 | 45.833 | 0.00 | 0.00 | 0.00 | 3.50 |
837 | 2649 | 5.353394 | TGATTAGTTAGCGATGGAAGGTT | 57.647 | 39.130 | 0.00 | 0.00 | 0.00 | 3.50 |
838 | 2650 | 5.741011 | TGATTAGTTAGCGATGGAAGGTTT | 58.259 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
839 | 2651 | 6.880484 | TGATTAGTTAGCGATGGAAGGTTTA | 58.120 | 36.000 | 0.00 | 0.00 | 0.00 | 2.01 |
840 | 2652 | 6.759827 | TGATTAGTTAGCGATGGAAGGTTTAC | 59.240 | 38.462 | 0.00 | 0.00 | 0.00 | 2.01 |
841 | 2653 | 3.518590 | AGTTAGCGATGGAAGGTTTACG | 58.481 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
842 | 2654 | 3.056322 | AGTTAGCGATGGAAGGTTTACGT | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 3.57 |
843 | 2655 | 4.158394 | AGTTAGCGATGGAAGGTTTACGTA | 59.842 | 41.667 | 0.00 | 0.00 | 0.00 | 3.57 |
844 | 2656 | 3.160777 | AGCGATGGAAGGTTTACGTAG | 57.839 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
845 | 2657 | 1.591619 | GCGATGGAAGGTTTACGTAGC | 59.408 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
846 | 2658 | 2.737679 | GCGATGGAAGGTTTACGTAGCT | 60.738 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
847 | 2659 | 3.518590 | CGATGGAAGGTTTACGTAGCTT | 58.481 | 45.455 | 2.53 | 2.53 | 38.48 | 3.74 |
848 | 2660 | 3.930848 | CGATGGAAGGTTTACGTAGCTTT | 59.069 | 43.478 | 4.41 | 1.05 | 36.09 | 3.51 |
849 | 2661 | 4.390909 | CGATGGAAGGTTTACGTAGCTTTT | 59.609 | 41.667 | 4.41 | 0.00 | 36.09 | 2.27 |
850 | 2662 | 5.445540 | CGATGGAAGGTTTACGTAGCTTTTC | 60.446 | 44.000 | 4.41 | 4.40 | 36.09 | 2.29 |
851 | 2663 | 3.742369 | TGGAAGGTTTACGTAGCTTTTCG | 59.258 | 43.478 | 4.41 | 0.00 | 36.09 | 3.46 |
852 | 2664 | 3.742882 | GGAAGGTTTACGTAGCTTTTCGT | 59.257 | 43.478 | 13.77 | 13.77 | 42.82 | 3.85 |
853 | 2665 | 4.923281 | GGAAGGTTTACGTAGCTTTTCGTA | 59.077 | 41.667 | 12.17 | 12.17 | 40.70 | 3.43 |
854 | 2666 | 5.405269 | GGAAGGTTTACGTAGCTTTTCGTAA | 59.595 | 40.000 | 19.48 | 19.48 | 46.02 | 3.18 |
867 | 2679 | 5.385396 | CTTTTCGTAAAGCCATACGTAGG | 57.615 | 43.478 | 15.80 | 0.00 | 46.57 | 3.18 |
868 | 2680 | 4.454728 | TTTCGTAAAGCCATACGTAGGT | 57.545 | 40.909 | 15.80 | 0.00 | 46.57 | 3.08 |
869 | 2681 | 3.698029 | TCGTAAAGCCATACGTAGGTC | 57.302 | 47.619 | 15.80 | 0.00 | 46.57 | 3.85 |
870 | 2682 | 3.282021 | TCGTAAAGCCATACGTAGGTCT | 58.718 | 45.455 | 15.80 | 0.00 | 46.57 | 3.85 |
871 | 2683 | 4.450976 | TCGTAAAGCCATACGTAGGTCTA | 58.549 | 43.478 | 15.80 | 0.00 | 46.57 | 2.59 |
872 | 2684 | 4.512944 | TCGTAAAGCCATACGTAGGTCTAG | 59.487 | 45.833 | 15.80 | 0.00 | 46.57 | 2.43 |
873 | 2685 | 3.729862 | AAAGCCATACGTAGGTCTAGC | 57.270 | 47.619 | 6.48 | 2.40 | 0.00 | 3.42 |
874 | 2686 | 2.359981 | AGCCATACGTAGGTCTAGCA | 57.640 | 50.000 | 6.48 | 0.00 | 0.00 | 3.49 |
875 | 2687 | 2.877866 | AGCCATACGTAGGTCTAGCAT | 58.122 | 47.619 | 6.48 | 0.00 | 0.00 | 3.79 |
876 | 2688 | 3.231818 | AGCCATACGTAGGTCTAGCATT | 58.768 | 45.455 | 6.48 | 0.00 | 0.00 | 3.56 |
877 | 2689 | 3.641906 | AGCCATACGTAGGTCTAGCATTT | 59.358 | 43.478 | 6.48 | 0.00 | 0.00 | 2.32 |
878 | 2690 | 4.101119 | AGCCATACGTAGGTCTAGCATTTT | 59.899 | 41.667 | 6.48 | 0.00 | 0.00 | 1.82 |
879 | 2691 | 4.814771 | GCCATACGTAGGTCTAGCATTTTT | 59.185 | 41.667 | 6.48 | 0.00 | 0.00 | 1.94 |
880 | 2692 | 5.277345 | GCCATACGTAGGTCTAGCATTTTTG | 60.277 | 44.000 | 6.48 | 0.00 | 0.00 | 2.44 |
881 | 2693 | 5.815740 | CCATACGTAGGTCTAGCATTTTTGT | 59.184 | 40.000 | 6.48 | 0.00 | 0.00 | 2.83 |
882 | 2694 | 6.238103 | CCATACGTAGGTCTAGCATTTTTGTG | 60.238 | 42.308 | 6.48 | 0.00 | 0.00 | 3.33 |
883 | 2695 | 3.435671 | ACGTAGGTCTAGCATTTTTGTGC | 59.564 | 43.478 | 0.00 | 0.00 | 45.38 | 4.57 |
902 | 2714 | 3.537793 | GCTTTTATAGCCCGTATGCAC | 57.462 | 47.619 | 0.00 | 0.00 | 44.48 | 4.57 |
903 | 2715 | 2.096417 | GCTTTTATAGCCCGTATGCACG | 60.096 | 50.000 | 0.00 | 0.00 | 44.48 | 5.34 |
915 | 2727 | 3.168193 | CGTATGCACGGAATTTTGTTCC | 58.832 | 45.455 | 0.00 | 0.00 | 44.59 | 3.62 |
916 | 2728 | 2.741759 | ATGCACGGAATTTTGTTCCC | 57.258 | 45.000 | 0.00 | 0.00 | 35.17 | 3.97 |
917 | 2729 | 1.403814 | TGCACGGAATTTTGTTCCCA | 58.596 | 45.000 | 1.50 | 0.00 | 35.17 | 4.37 |
918 | 2730 | 1.967066 | TGCACGGAATTTTGTTCCCAT | 59.033 | 42.857 | 1.50 | 0.00 | 35.17 | 4.00 |
919 | 2731 | 3.157881 | TGCACGGAATTTTGTTCCCATA | 58.842 | 40.909 | 1.50 | 0.00 | 35.17 | 2.74 |
920 | 2732 | 3.766591 | TGCACGGAATTTTGTTCCCATAT | 59.233 | 39.130 | 1.50 | 0.00 | 35.17 | 1.78 |
921 | 2733 | 4.221703 | TGCACGGAATTTTGTTCCCATATT | 59.778 | 37.500 | 1.50 | 0.00 | 35.17 | 1.28 |
922 | 2734 | 5.175127 | GCACGGAATTTTGTTCCCATATTT | 58.825 | 37.500 | 1.50 | 0.00 | 35.17 | 1.40 |
923 | 2735 | 5.290885 | GCACGGAATTTTGTTCCCATATTTC | 59.709 | 40.000 | 1.50 | 0.00 | 35.17 | 2.17 |
924 | 2736 | 5.810074 | CACGGAATTTTGTTCCCATATTTCC | 59.190 | 40.000 | 1.50 | 0.00 | 35.17 | 3.13 |
925 | 2737 | 5.105106 | ACGGAATTTTGTTCCCATATTTCCC | 60.105 | 40.000 | 1.50 | 0.00 | 32.74 | 3.97 |
936 | 2748 | 6.260700 | TCCCATATTTCCCCATATATTCGG | 57.739 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
979 | 2791 | 2.180204 | CACCCGCCGGAGCTTAATG | 61.180 | 63.158 | 5.05 | 0.00 | 36.60 | 1.90 |
980 | 2792 | 2.363975 | ACCCGCCGGAGCTTAATGA | 61.364 | 57.895 | 5.05 | 0.00 | 36.60 | 2.57 |
981 | 2793 | 1.887707 | CCCGCCGGAGCTTAATGAC | 60.888 | 63.158 | 5.05 | 0.00 | 36.60 | 3.06 |
1008 | 2820 | 3.378512 | AGGAGTAATCTGCATGAGTGGA | 58.621 | 45.455 | 0.00 | 0.00 | 34.40 | 4.02 |
1017 | 2829 | 3.132160 | CTGCATGAGTGGAATAGAGCTG | 58.868 | 50.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1090 | 2902 | 3.012560 | CGAAGCTCCCAATCCCATC | 57.987 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
1168 | 2992 | 2.110578 | TGATCTTACAGGCTGCTGCTA | 58.889 | 47.619 | 15.89 | 0.00 | 39.59 | 3.49 |
1537 | 4362 | 1.598130 | GTCGCCAAGTGCCAGAACT | 60.598 | 57.895 | 0.00 | 0.00 | 36.24 | 3.01 |
2134 | 4993 | 0.751277 | CGCCAATGGATGCCAAGGTA | 60.751 | 55.000 | 2.05 | 0.00 | 36.95 | 3.08 |
2155 | 5023 | 8.703378 | AGGTATACTAAGCCTTAATTCGTACT | 57.297 | 34.615 | 2.25 | 0.00 | 0.00 | 2.73 |
2193 | 5061 | 8.608844 | TTACTCCAGATCTCAAACTTTTCTTC | 57.391 | 34.615 | 0.00 | 0.00 | 0.00 | 2.87 |
2200 | 5068 | 8.186821 | CAGATCTCAAACTTTTCTTCTTGTTGT | 58.813 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
2215 | 5083 | 5.577835 | TCTTGTTGTGAAAACCAGATTTCG | 58.422 | 37.500 | 0.00 | 0.00 | 41.24 | 3.46 |
2437 | 5466 | 5.183140 | GTGATTGTGGGTAAGCACAAATACT | 59.817 | 40.000 | 0.00 | 0.00 | 44.12 | 2.12 |
2459 | 5488 | 2.607635 | ACATCGCACCACATTAATCGAC | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
2466 | 5495 | 4.630069 | GCACCACATTAATCGACTACAACT | 59.370 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2617 | 5817 | 4.562767 | TGAGTCCCATTAGCCCATTACTA | 58.437 | 43.478 | 0.00 | 0.00 | 0.00 | 1.82 |
2626 | 5826 | 3.666975 | AGCCCATTACTAGGGGGAATA | 57.333 | 47.619 | 13.39 | 0.00 | 45.80 | 1.75 |
2661 | 5861 | 3.883489 | GGGGATTTATATGCGGGCTATTC | 59.117 | 47.826 | 0.00 | 0.00 | 0.00 | 1.75 |
2704 | 5904 | 2.040012 | CCTCTGGCCTCTGCATCATTAT | 59.960 | 50.000 | 3.32 | 0.00 | 40.13 | 1.28 |
2780 | 6377 | 2.090775 | AGGTGGATGGGGAAACAAACTT | 60.091 | 45.455 | 0.00 | 0.00 | 0.00 | 2.66 |
2826 | 6423 | 9.844790 | TGATTCACATGATTATGAAAACTTGAC | 57.155 | 29.630 | 4.20 | 0.00 | 38.29 | 3.18 |
3032 | 6812 | 7.094205 | ACACAGATGACCAACATAGGAAAAATC | 60.094 | 37.037 | 0.00 | 0.00 | 39.56 | 2.17 |
3036 | 6816 | 5.016173 | TGACCAACATAGGAAAAATCCCTG | 58.984 | 41.667 | 0.00 | 0.00 | 35.30 | 4.45 |
3097 | 6878 | 2.979678 | AGTTGAAGAGGCCCTTACAAGA | 59.020 | 45.455 | 0.00 | 0.00 | 34.68 | 3.02 |
3124 | 6905 | 3.081061 | TCGGATGTTCTGGGTGAATTTG | 58.919 | 45.455 | 0.00 | 0.00 | 36.99 | 2.32 |
3143 | 6924 | 2.771089 | TGTTTGGCTTCTACTCAGCTG | 58.229 | 47.619 | 7.63 | 7.63 | 37.43 | 4.24 |
3245 | 7113 | 7.557724 | TGGTTTACATCGTCCTTGATAACATA | 58.442 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
3248 | 7116 | 7.652300 | TTACATCGTCCTTGATAACATATGC | 57.348 | 36.000 | 1.58 | 0.00 | 0.00 | 3.14 |
3425 | 7640 | 8.793592 | GGTGGAATAGGTGGTATTTTTATCATC | 58.206 | 37.037 | 0.00 | 0.00 | 30.93 | 2.92 |
3834 | 8050 | 2.045561 | TCACGGCAAAAAGAAGGTGA | 57.954 | 45.000 | 0.00 | 0.00 | 32.51 | 4.02 |
3867 | 8083 | 3.685756 | GGGTGTGCGTTTAAGTATTGCTA | 59.314 | 43.478 | 0.00 | 0.00 | 0.00 | 3.49 |
4079 | 8295 | 6.716934 | ATCGATCCAGTGTATCTACAAACT | 57.283 | 37.500 | 0.00 | 0.00 | 38.04 | 2.66 |
4489 | 8744 | 2.136026 | AGGAACAGGGAAGGTTTCACT | 58.864 | 47.619 | 0.00 | 0.00 | 46.45 | 3.41 |
4888 | 11121 | 6.942163 | TGACATTTCCCCCAATTTTTGATA | 57.058 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
4968 | 11706 | 9.932699 | CTCTAATCTTATGCTTGTGAGAATTTG | 57.067 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
4977 | 11715 | 4.913924 | GCTTGTGAGAATTTGTAAGCAGTG | 59.086 | 41.667 | 0.00 | 0.00 | 40.02 | 3.66 |
4987 | 11725 | 6.803154 | ATTTGTAAGCAGTGGACTAGAAAC | 57.197 | 37.500 | 0.00 | 0.00 | 0.00 | 2.78 |
5109 | 12048 | 2.737252 | CGAGACAGGGAAACAAGCTTAC | 59.263 | 50.000 | 0.00 | 0.00 | 0.00 | 2.34 |
5110 | 12049 | 3.075148 | GAGACAGGGAAACAAGCTTACC | 58.925 | 50.000 | 0.00 | 0.50 | 0.00 | 2.85 |
5114 | 12053 | 3.425162 | AGGGAAACAAGCTTACCTGAG | 57.575 | 47.619 | 0.00 | 0.00 | 38.30 | 3.35 |
5115 | 12054 | 2.711547 | AGGGAAACAAGCTTACCTGAGT | 59.288 | 45.455 | 0.00 | 0.00 | 38.30 | 3.41 |
5116 | 12055 | 3.075148 | GGGAAACAAGCTTACCTGAGTC | 58.925 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5117 | 12056 | 3.496160 | GGGAAACAAGCTTACCTGAGTCA | 60.496 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
5118 | 12057 | 4.327680 | GGAAACAAGCTTACCTGAGTCAT | 58.672 | 43.478 | 0.00 | 0.00 | 0.00 | 3.06 |
5120 | 12059 | 5.335191 | GGAAACAAGCTTACCTGAGTCATTG | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 2.82 |
5121 | 12060 | 4.357918 | ACAAGCTTACCTGAGTCATTGT | 57.642 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
5123 | 12062 | 4.516698 | ACAAGCTTACCTGAGTCATTGTTG | 59.483 | 41.667 | 0.00 | 0.00 | 0.00 | 3.33 |
5124 | 12063 | 4.623932 | AGCTTACCTGAGTCATTGTTGA | 57.376 | 40.909 | 0.00 | 0.00 | 0.00 | 3.18 |
5125 | 12064 | 4.973168 | AGCTTACCTGAGTCATTGTTGAA | 58.027 | 39.130 | 0.00 | 0.00 | 32.48 | 2.69 |
5127 | 12066 | 4.378874 | GCTTACCTGAGTCATTGTTGAAGC | 60.379 | 45.833 | 11.57 | 11.57 | 32.48 | 3.86 |
5130 | 12069 | 4.973168 | ACCTGAGTCATTGTTGAAGCTTA | 58.027 | 39.130 | 0.00 | 0.00 | 32.48 | 3.09 |
5131 | 12070 | 5.376625 | ACCTGAGTCATTGTTGAAGCTTAA | 58.623 | 37.500 | 0.00 | 0.00 | 32.48 | 1.85 |
5132 | 12071 | 5.471456 | ACCTGAGTCATTGTTGAAGCTTAAG | 59.529 | 40.000 | 0.00 | 0.00 | 32.48 | 1.85 |
5133 | 12072 | 5.362556 | TGAGTCATTGTTGAAGCTTAAGC | 57.637 | 39.130 | 20.09 | 20.09 | 42.49 | 3.09 |
5146 | 12085 | 3.879932 | GCTTAAGCTTGACGACAGTTT | 57.120 | 42.857 | 20.38 | 0.00 | 38.21 | 2.66 |
5147 | 12086 | 3.800163 | GCTTAAGCTTGACGACAGTTTC | 58.200 | 45.455 | 20.38 | 0.00 | 38.21 | 2.78 |
5148 | 12087 | 3.661936 | GCTTAAGCTTGACGACAGTTTCG | 60.662 | 47.826 | 20.38 | 0.00 | 45.24 | 3.46 |
5163 | 12102 | 5.251999 | CAGTTTCGTCAGTTAACTGTAGC | 57.748 | 43.478 | 29.83 | 20.71 | 42.24 | 3.58 |
5164 | 12103 | 4.743151 | CAGTTTCGTCAGTTAACTGTAGCA | 59.257 | 41.667 | 29.83 | 15.70 | 42.24 | 3.49 |
5165 | 12104 | 4.743644 | AGTTTCGTCAGTTAACTGTAGCAC | 59.256 | 41.667 | 29.83 | 20.90 | 44.12 | 4.40 |
5167 | 12106 | 4.579454 | TCGTCAGTTAACTGTAGCACTT | 57.421 | 40.909 | 29.83 | 0.00 | 44.12 | 3.16 |
5168 | 12107 | 4.543692 | TCGTCAGTTAACTGTAGCACTTC | 58.456 | 43.478 | 29.83 | 13.07 | 44.12 | 3.01 |
5170 | 12109 | 4.383052 | CGTCAGTTAACTGTAGCACTTCAG | 59.617 | 45.833 | 29.83 | 8.79 | 44.12 | 3.02 |
5171 | 12110 | 4.686554 | GTCAGTTAACTGTAGCACTTCAGG | 59.313 | 45.833 | 29.83 | 5.14 | 44.12 | 3.86 |
5172 | 12111 | 3.433615 | CAGTTAACTGTAGCACTTCAGGC | 59.566 | 47.826 | 24.70 | 0.00 | 39.09 | 4.85 |
5173 | 12112 | 3.325135 | AGTTAACTGTAGCACTTCAGGCT | 59.675 | 43.478 | 7.48 | 0.00 | 45.18 | 4.58 |
5174 | 12113 | 2.175878 | AACTGTAGCACTTCAGGCTG | 57.824 | 50.000 | 8.58 | 8.58 | 42.62 | 4.85 |
5175 | 12114 | 1.051812 | ACTGTAGCACTTCAGGCTGT | 58.948 | 50.000 | 15.27 | 0.00 | 42.62 | 4.40 |
5176 | 12115 | 1.417890 | ACTGTAGCACTTCAGGCTGTT | 59.582 | 47.619 | 15.27 | 0.00 | 42.62 | 3.16 |
5179 | 12118 | 1.801178 | GTAGCACTTCAGGCTGTTGTC | 59.199 | 52.381 | 15.27 | 8.59 | 42.62 | 3.18 |
5181 | 12120 | 0.880278 | GCACTTCAGGCTGTTGTCGA | 60.880 | 55.000 | 15.27 | 0.00 | 0.00 | 4.20 |
5182 | 12121 | 0.861837 | CACTTCAGGCTGTTGTCGAC | 59.138 | 55.000 | 15.27 | 9.11 | 0.00 | 4.20 |
5192 | 12131 | 3.190337 | GTTGTCGACAACGGCTAGT | 57.810 | 52.632 | 37.33 | 0.00 | 45.44 | 2.57 |
5193 | 12132 | 1.494824 | GTTGTCGACAACGGCTAGTT | 58.505 | 50.000 | 37.33 | 0.00 | 45.44 | 2.24 |
5194 | 12133 | 1.454653 | GTTGTCGACAACGGCTAGTTC | 59.545 | 52.381 | 37.33 | 17.60 | 45.44 | 3.01 |
5195 | 12134 | 0.956633 | TGTCGACAACGGCTAGTTCT | 59.043 | 50.000 | 17.62 | 0.00 | 44.93 | 3.01 |
5196 | 12135 | 1.068748 | TGTCGACAACGGCTAGTTCTC | 60.069 | 52.381 | 17.62 | 0.00 | 44.93 | 2.87 |
5197 | 12136 | 1.199558 | GTCGACAACGGCTAGTTCTCT | 59.800 | 52.381 | 11.55 | 0.00 | 42.02 | 3.10 |
5199 | 12138 | 1.068472 | CGACAACGGCTAGTTCTCTGT | 60.068 | 52.381 | 0.00 | 0.00 | 42.02 | 3.41 |
5200 | 12139 | 2.597520 | GACAACGGCTAGTTCTCTGTC | 58.402 | 52.381 | 0.00 | 0.00 | 42.02 | 3.51 |
5201 | 12140 | 1.961394 | ACAACGGCTAGTTCTCTGTCA | 59.039 | 47.619 | 0.00 | 0.00 | 42.02 | 3.58 |
5202 | 12141 | 2.029828 | ACAACGGCTAGTTCTCTGTCAG | 60.030 | 50.000 | 0.00 | 0.00 | 42.02 | 3.51 |
5203 | 12142 | 1.912417 | ACGGCTAGTTCTCTGTCAGT | 58.088 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5204 | 12143 | 2.240279 | ACGGCTAGTTCTCTGTCAGTT | 58.760 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
5205 | 12144 | 3.418995 | ACGGCTAGTTCTCTGTCAGTTA | 58.581 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
5206 | 12145 | 3.440872 | ACGGCTAGTTCTCTGTCAGTTAG | 59.559 | 47.826 | 0.00 | 0.00 | 0.00 | 2.34 |
5207 | 12146 | 3.732471 | CGGCTAGTTCTCTGTCAGTTAGC | 60.732 | 52.174 | 0.00 | 7.02 | 32.01 | 3.09 |
5208 | 12147 | 3.445805 | GGCTAGTTCTCTGTCAGTTAGCT | 59.554 | 47.826 | 0.00 | 0.00 | 32.72 | 3.32 |
5209 | 12148 | 4.420168 | GCTAGTTCTCTGTCAGTTAGCTG | 58.580 | 47.826 | 0.00 | 0.00 | 43.87 | 4.24 |
5210 | 12149 | 4.082463 | GCTAGTTCTCTGTCAGTTAGCTGT | 60.082 | 45.833 | 6.47 | 0.00 | 43.05 | 4.40 |
5212 | 12151 | 5.283457 | AGTTCTCTGTCAGTTAGCTGTTT | 57.717 | 39.130 | 6.47 | 0.00 | 43.05 | 2.83 |
5213 | 12152 | 6.406692 | AGTTCTCTGTCAGTTAGCTGTTTA | 57.593 | 37.500 | 6.47 | 0.00 | 43.05 | 2.01 |
5214 | 12153 | 6.451393 | AGTTCTCTGTCAGTTAGCTGTTTAG | 58.549 | 40.000 | 6.47 | 4.26 | 43.05 | 1.85 |
5215 | 12154 | 5.392767 | TCTCTGTCAGTTAGCTGTTTAGG | 57.607 | 43.478 | 6.47 | 0.00 | 43.05 | 2.69 |
5216 | 12155 | 5.077564 | TCTCTGTCAGTTAGCTGTTTAGGA | 58.922 | 41.667 | 6.47 | 0.00 | 43.05 | 2.94 |
5217 | 12156 | 5.717178 | TCTCTGTCAGTTAGCTGTTTAGGAT | 59.283 | 40.000 | 6.47 | 0.00 | 43.05 | 3.24 |
5219 | 12158 | 7.396339 | TCTCTGTCAGTTAGCTGTTTAGGATTA | 59.604 | 37.037 | 6.47 | 0.00 | 43.05 | 1.75 |
5221 | 12160 | 7.178628 | TCTGTCAGTTAGCTGTTTAGGATTAGT | 59.821 | 37.037 | 6.47 | 0.00 | 43.05 | 2.24 |
5223 | 12162 | 8.154856 | TGTCAGTTAGCTGTTTAGGATTAGTTT | 58.845 | 33.333 | 6.47 | 0.00 | 43.05 | 2.66 |
5224 | 12163 | 9.000486 | GTCAGTTAGCTGTTTAGGATTAGTTTT | 58.000 | 33.333 | 6.47 | 0.00 | 43.05 | 2.43 |
5225 | 12164 | 8.999431 | TCAGTTAGCTGTTTAGGATTAGTTTTG | 58.001 | 33.333 | 6.47 | 0.00 | 43.05 | 2.44 |
5226 | 12165 | 7.750903 | CAGTTAGCTGTTTAGGATTAGTTTTGC | 59.249 | 37.037 | 0.00 | 0.00 | 37.92 | 3.68 |
5227 | 12166 | 7.665974 | AGTTAGCTGTTTAGGATTAGTTTTGCT | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
5228 | 12167 | 6.901081 | AGCTGTTTAGGATTAGTTTTGCTT | 57.099 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
5231 | 12170 | 6.803807 | GCTGTTTAGGATTAGTTTTGCTTCAG | 59.196 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
5232 | 12171 | 6.677913 | TGTTTAGGATTAGTTTTGCTTCAGC | 58.322 | 36.000 | 0.00 | 0.00 | 42.50 | 4.26 |
5246 | 12185 | 3.198068 | GCTTCAGCAGAATAATCGGTCA | 58.802 | 45.455 | 0.00 | 0.00 | 41.59 | 4.02 |
5247 | 12186 | 3.247173 | GCTTCAGCAGAATAATCGGTCAG | 59.753 | 47.826 | 0.00 | 0.00 | 41.59 | 3.51 |
5248 | 12187 | 2.826428 | TCAGCAGAATAATCGGTCAGC | 58.174 | 47.619 | 0.00 | 0.00 | 0.00 | 4.26 |
5249 | 12188 | 2.432146 | TCAGCAGAATAATCGGTCAGCT | 59.568 | 45.455 | 0.00 | 0.00 | 0.00 | 4.24 |
5250 | 12189 | 2.799412 | CAGCAGAATAATCGGTCAGCTC | 59.201 | 50.000 | 0.00 | 0.00 | 0.00 | 4.09 |
5251 | 12190 | 1.789464 | GCAGAATAATCGGTCAGCTCG | 59.211 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
5252 | 12191 | 2.799917 | GCAGAATAATCGGTCAGCTCGT | 60.800 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
5253 | 12192 | 3.448686 | CAGAATAATCGGTCAGCTCGTT | 58.551 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
5254 | 12193 | 3.243877 | CAGAATAATCGGTCAGCTCGTTG | 59.756 | 47.826 | 0.00 | 0.00 | 0.00 | 4.10 |
5255 | 12194 | 3.130516 | AGAATAATCGGTCAGCTCGTTGA | 59.869 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
5256 | 12195 | 2.561733 | TAATCGGTCAGCTCGTTGAG | 57.438 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5258 | 12197 | 0.603569 | ATCGGTCAGCTCGTTGAGTT | 59.396 | 50.000 | 0.00 | 0.00 | 31.39 | 3.01 |
5259 | 12198 | 1.241165 | TCGGTCAGCTCGTTGAGTTA | 58.759 | 50.000 | 0.00 | 0.00 | 31.39 | 2.24 |
5260 | 12199 | 1.199327 | TCGGTCAGCTCGTTGAGTTAG | 59.801 | 52.381 | 0.00 | 0.00 | 31.39 | 2.34 |
5261 | 12200 | 1.068472 | CGGTCAGCTCGTTGAGTTAGT | 60.068 | 52.381 | 0.00 | 0.00 | 31.39 | 2.24 |
5262 | 12201 | 2.597520 | GGTCAGCTCGTTGAGTTAGTC | 58.402 | 52.381 | 0.00 | 0.00 | 31.39 | 2.59 |
5264 | 12203 | 1.878088 | TCAGCTCGTTGAGTTAGTCGT | 59.122 | 47.619 | 0.00 | 0.00 | 31.39 | 4.34 |
5265 | 12204 | 2.095869 | TCAGCTCGTTGAGTTAGTCGTC | 60.096 | 50.000 | 0.00 | 0.00 | 31.39 | 4.20 |
5267 | 12206 | 1.136141 | GCTCGTTGAGTTAGTCGTCGA | 60.136 | 52.381 | 0.00 | 0.00 | 33.77 | 4.20 |
5269 | 12208 | 1.136141 | TCGTTGAGTTAGTCGTCGAGC | 60.136 | 52.381 | 0.00 | 0.00 | 32.03 | 5.03 |
5271 | 12210 | 2.243407 | GTTGAGTTAGTCGTCGAGCTG | 58.757 | 52.381 | 0.00 | 0.00 | 0.00 | 4.24 |
5272 | 12211 | 1.804601 | TGAGTTAGTCGTCGAGCTGA | 58.195 | 50.000 | 0.00 | 0.00 | 0.00 | 4.26 |
5273 | 12212 | 2.357075 | TGAGTTAGTCGTCGAGCTGAT | 58.643 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
5274 | 12213 | 2.352034 | TGAGTTAGTCGTCGAGCTGATC | 59.648 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
5275 | 12214 | 1.671845 | AGTTAGTCGTCGAGCTGATCC | 59.328 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
5276 | 12215 | 1.400846 | GTTAGTCGTCGAGCTGATCCA | 59.599 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
5277 | 12216 | 1.300481 | TAGTCGTCGAGCTGATCCAG | 58.700 | 55.000 | 0.00 | 0.00 | 34.12 | 3.86 |
5278 | 12217 | 0.678366 | AGTCGTCGAGCTGATCCAGT | 60.678 | 55.000 | 0.00 | 0.00 | 33.43 | 4.00 |
5279 | 12218 | 0.171455 | GTCGTCGAGCTGATCCAGTT | 59.829 | 55.000 | 0.00 | 0.00 | 33.43 | 3.16 |
5282 | 12221 | 1.402259 | CGTCGAGCTGATCCAGTTAGT | 59.598 | 52.381 | 0.00 | 0.00 | 33.43 | 2.24 |
5284 | 12223 | 3.673594 | CGTCGAGCTGATCCAGTTAGTTT | 60.674 | 47.826 | 0.00 | 0.00 | 33.43 | 2.66 |
5285 | 12224 | 3.614616 | GTCGAGCTGATCCAGTTAGTTTG | 59.385 | 47.826 | 0.00 | 0.00 | 33.43 | 2.93 |
5286 | 12225 | 3.258372 | TCGAGCTGATCCAGTTAGTTTGT | 59.742 | 43.478 | 0.00 | 0.00 | 33.43 | 2.83 |
5287 | 12226 | 4.461431 | TCGAGCTGATCCAGTTAGTTTGTA | 59.539 | 41.667 | 0.00 | 0.00 | 33.43 | 2.41 |
5288 | 12227 | 4.800993 | CGAGCTGATCCAGTTAGTTTGTAG | 59.199 | 45.833 | 0.00 | 0.00 | 33.43 | 2.74 |
5289 | 12228 | 5.091261 | AGCTGATCCAGTTAGTTTGTAGG | 57.909 | 43.478 | 0.00 | 0.00 | 33.43 | 3.18 |
5290 | 12229 | 3.623510 | GCTGATCCAGTTAGTTTGTAGGC | 59.376 | 47.826 | 0.00 | 0.00 | 33.43 | 3.93 |
5292 | 12231 | 4.832248 | TGATCCAGTTAGTTTGTAGGCTG | 58.168 | 43.478 | 0.00 | 0.00 | 0.00 | 4.85 |
5293 | 12232 | 3.695830 | TCCAGTTAGTTTGTAGGCTGG | 57.304 | 47.619 | 0.00 | 0.00 | 43.37 | 4.85 |
5294 | 12233 | 2.976882 | TCCAGTTAGTTTGTAGGCTGGT | 59.023 | 45.455 | 0.00 | 0.00 | 42.77 | 4.00 |
5295 | 12234 | 3.074412 | CCAGTTAGTTTGTAGGCTGGTG | 58.926 | 50.000 | 0.00 | 0.00 | 38.80 | 4.17 |
5296 | 12235 | 3.244422 | CCAGTTAGTTTGTAGGCTGGTGA | 60.244 | 47.826 | 0.00 | 0.00 | 38.80 | 4.02 |
5297 | 12236 | 4.565652 | CCAGTTAGTTTGTAGGCTGGTGAT | 60.566 | 45.833 | 0.00 | 0.00 | 38.80 | 3.06 |
5298 | 12237 | 4.631813 | CAGTTAGTTTGTAGGCTGGTGATC | 59.368 | 45.833 | 0.00 | 0.00 | 0.00 | 2.92 |
5302 | 12241 | 1.557099 | TTGTAGGCTGGTGATCGTCT | 58.443 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
5305 | 12244 | 1.103803 | TAGGCTGGTGATCGTCTGTC | 58.896 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5306 | 12245 | 1.153549 | GGCTGGTGATCGTCTGTCC | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
5307 | 12246 | 1.517257 | GCTGGTGATCGTCTGTCCG | 60.517 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
5308 | 12247 | 1.883732 | CTGGTGATCGTCTGTCCGT | 59.116 | 57.895 | 0.00 | 0.00 | 0.00 | 4.69 |
5309 | 12248 | 0.456824 | CTGGTGATCGTCTGTCCGTG | 60.457 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5311 | 12250 | 1.153823 | GTGATCGTCTGTCCGTGGG | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.61 |
5313 | 12252 | 0.683179 | TGATCGTCTGTCCGTGGGAT | 60.683 | 55.000 | 0.00 | 0.00 | 32.73 | 3.85 |
5314 | 12253 | 0.249073 | GATCGTCTGTCCGTGGGATG | 60.249 | 60.000 | 0.00 | 0.00 | 32.73 | 3.51 |
5316 | 12255 | 2.125106 | GTCTGTCCGTGGGATGGC | 60.125 | 66.667 | 0.00 | 0.00 | 32.73 | 4.40 |
5317 | 12256 | 3.770040 | TCTGTCCGTGGGATGGCG | 61.770 | 66.667 | 0.00 | 0.00 | 32.73 | 5.69 |
5318 | 12257 | 4.082523 | CTGTCCGTGGGATGGCGT | 62.083 | 66.667 | 0.00 | 0.00 | 32.73 | 5.68 |
5319 | 12258 | 4.386951 | TGTCCGTGGGATGGCGTG | 62.387 | 66.667 | 0.00 | 0.00 | 32.73 | 5.34 |
5322 | 12261 | 4.838152 | CCGTGGGATGGCGTGGAG | 62.838 | 72.222 | 0.00 | 0.00 | 0.00 | 3.86 |
5323 | 12262 | 3.770040 | CGTGGGATGGCGTGGAGA | 61.770 | 66.667 | 0.00 | 0.00 | 0.00 | 3.71 |
5324 | 12263 | 2.911143 | GTGGGATGGCGTGGAGAT | 59.089 | 61.111 | 0.00 | 0.00 | 0.00 | 2.75 |
5325 | 12264 | 1.744320 | CGTGGGATGGCGTGGAGATA | 61.744 | 60.000 | 0.00 | 0.00 | 0.00 | 1.98 |
5326 | 12265 | 0.468226 | GTGGGATGGCGTGGAGATAA | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 1.75 |
5327 | 12266 | 0.468226 | TGGGATGGCGTGGAGATAAC | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 1.89 |
5328 | 12267 | 0.600255 | GGGATGGCGTGGAGATAACG | 60.600 | 60.000 | 0.00 | 0.00 | 43.81 | 3.18 |
5333 | 12272 | 4.777781 | CGTGGAGATAACGCACGA | 57.222 | 55.556 | 0.00 | 0.00 | 36.96 | 4.35 |
5334 | 12273 | 3.024423 | CGTGGAGATAACGCACGAA | 57.976 | 52.632 | 0.00 | 0.00 | 36.96 | 3.85 |
5336 | 12275 | 0.645868 | GTGGAGATAACGCACGAAGC | 59.354 | 55.000 | 0.00 | 0.00 | 40.87 | 3.86 |
5337 | 12276 | 0.245266 | TGGAGATAACGCACGAAGCA | 59.755 | 50.000 | 0.00 | 0.00 | 46.13 | 3.91 |
5338 | 12277 | 0.645868 | GGAGATAACGCACGAAGCAC | 59.354 | 55.000 | 0.00 | 0.00 | 46.13 | 4.40 |
5340 | 12279 | 1.076533 | AGATAACGCACGAAGCACGG | 61.077 | 55.000 | 0.00 | 0.00 | 46.13 | 4.94 |
5344 | 12283 | 4.505217 | CGCACGAAGCACGGCATC | 62.505 | 66.667 | 8.06 | 0.00 | 46.13 | 3.91 |
5351 | 12290 | 0.379669 | GAAGCACGGCATCATCAAGG | 59.620 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
5352 | 12291 | 1.033746 | AAGCACGGCATCATCAAGGG | 61.034 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
5353 | 12292 | 1.451927 | GCACGGCATCATCAAGGGA | 60.452 | 57.895 | 0.00 | 0.00 | 0.00 | 4.20 |
5354 | 12293 | 1.442526 | GCACGGCATCATCAAGGGAG | 61.443 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5355 | 12294 | 0.107508 | CACGGCATCATCAAGGGAGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5356 | 12295 | 0.107508 | ACGGCATCATCAAGGGAGTG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5357 | 12296 | 0.816825 | CGGCATCATCAAGGGAGTGG | 60.817 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
5358 | 12297 | 1.105759 | GGCATCATCAAGGGAGTGGC | 61.106 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
5359 | 12298 | 0.106819 | GCATCATCAAGGGAGTGGCT | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 4.75 |
5360 | 12299 | 1.964552 | CATCATCAAGGGAGTGGCTC | 58.035 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
5362 | 12301 | 0.907486 | TCATCAAGGGAGTGGCTCAG | 59.093 | 55.000 | 0.00 | 0.00 | 31.08 | 3.35 |
5363 | 12302 | 0.747283 | CATCAAGGGAGTGGCTCAGC | 60.747 | 60.000 | 0.00 | 0.00 | 31.08 | 4.26 |
5364 | 12303 | 2.249413 | ATCAAGGGAGTGGCTCAGCG | 62.249 | 60.000 | 0.00 | 0.00 | 31.08 | 5.18 |
5365 | 12304 | 2.604686 | AAGGGAGTGGCTCAGCGA | 60.605 | 61.111 | 0.00 | 0.00 | 31.08 | 4.93 |
5367 | 12306 | 1.965754 | AAGGGAGTGGCTCAGCGATC | 61.966 | 60.000 | 0.00 | 0.00 | 31.08 | 3.69 |
5370 | 12309 | 1.875813 | GAGTGGCTCAGCGATCGTG | 60.876 | 63.158 | 17.81 | 13.42 | 0.00 | 4.35 |
5371 | 12310 | 2.887568 | GTGGCTCAGCGATCGTGG | 60.888 | 66.667 | 17.81 | 9.35 | 0.00 | 4.94 |
5373 | 12312 | 3.838271 | GGCTCAGCGATCGTGGGA | 61.838 | 66.667 | 17.81 | 10.72 | 0.00 | 4.37 |
5374 | 12313 | 2.419198 | GCTCAGCGATCGTGGGAT | 59.581 | 61.111 | 17.81 | 0.00 | 34.96 | 3.85 |
5375 | 12314 | 1.953138 | GCTCAGCGATCGTGGGATG | 60.953 | 63.158 | 17.81 | 8.31 | 31.51 | 3.51 |
5376 | 12315 | 1.300465 | CTCAGCGATCGTGGGATGG | 60.300 | 63.158 | 17.81 | 0.00 | 31.51 | 3.51 |
5383 | 12322 | 2.499205 | TCGTGGGATGGCACGATC | 59.501 | 61.111 | 0.00 | 0.00 | 46.91 | 3.69 |
5384 | 12323 | 2.186644 | CGTGGGATGGCACGATCA | 59.813 | 61.111 | 0.00 | 0.00 | 46.46 | 2.92 |
5385 | 12324 | 1.884464 | CGTGGGATGGCACGATCAG | 60.884 | 63.158 | 0.00 | 0.00 | 46.46 | 2.90 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
39 | 46 | 1.675310 | CATGACGTGCCCACCATGT | 60.675 | 57.895 | 0.00 | 0.00 | 46.14 | 3.21 |
45 | 52 | 0.250684 | AACATGACATGACGTGCCCA | 60.251 | 50.000 | 22.19 | 0.00 | 0.00 | 5.36 |
55 | 62 | 3.004315 | GTCGTGGGACAAAAACATGACAT | 59.996 | 43.478 | 0.00 | 0.00 | 45.67 | 3.06 |
71 | 78 | 2.668212 | ACACCATTGGCGTCGTGG | 60.668 | 61.111 | 9.45 | 9.45 | 38.96 | 4.94 |
105 | 112 | 2.112297 | GCAACCCCTCCGTTGACA | 59.888 | 61.111 | 5.67 | 0.00 | 44.88 | 3.58 |
379 | 387 | 3.140141 | CCATTTCCGGCATGGCGT | 61.140 | 61.111 | 35.39 | 17.99 | 34.98 | 5.68 |
429 | 437 | 2.819348 | GCCACTTCACTTCATTCCCCTT | 60.819 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
436 | 444 | 4.851639 | AATCCTAGCCACTTCACTTCAT | 57.148 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
463 | 471 | 1.198094 | TTCTTCCCATCCACTCGCCA | 61.198 | 55.000 | 0.00 | 0.00 | 0.00 | 5.69 |
571 | 580 | 2.364324 | GTCTAACGGCACCCTCATATCA | 59.636 | 50.000 | 0.00 | 0.00 | 0.00 | 2.15 |
622 | 639 | 7.765819 | TCACTGTCATGAAATTTCGATACAGAT | 59.234 | 33.333 | 31.91 | 21.48 | 37.22 | 2.90 |
627 | 644 | 5.290885 | CGGTCACTGTCATGAAATTTCGATA | 59.709 | 40.000 | 13.34 | 3.52 | 0.00 | 2.92 |
679 | 701 | 1.032114 | AAAAGCATCTACAGCCGGGC | 61.032 | 55.000 | 12.11 | 12.11 | 0.00 | 6.13 |
680 | 702 | 2.325583 | TAAAAGCATCTACAGCCGGG | 57.674 | 50.000 | 2.18 | 0.00 | 0.00 | 5.73 |
686 | 2498 | 4.094294 | GCGTTGTCCATAAAAGCATCTACA | 59.906 | 41.667 | 0.00 | 0.00 | 33.04 | 2.74 |
688 | 2500 | 4.513442 | AGCGTTGTCCATAAAAGCATCTA | 58.487 | 39.130 | 0.00 | 0.00 | 34.91 | 1.98 |
696 | 2508 | 3.688694 | AGGTGTAGCGTTGTCCATAAA | 57.311 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
701 | 2513 | 0.242017 | ACGTAGGTGTAGCGTTGTCC | 59.758 | 55.000 | 0.00 | 0.00 | 35.11 | 4.02 |
703 | 2515 | 3.641437 | TTTACGTAGGTGTAGCGTTGT | 57.359 | 42.857 | 0.00 | 0.00 | 39.64 | 3.32 |
705 | 2517 | 4.559153 | ACAATTTACGTAGGTGTAGCGTT | 58.441 | 39.130 | 0.00 | 0.00 | 39.64 | 4.84 |
775 | 2587 | 3.611542 | GGGGCCCCCTCCCTTTTT | 61.612 | 66.667 | 33.01 | 0.00 | 45.80 | 1.94 |
776 | 2588 | 4.980476 | TGGGGCCCCCTCCCTTTT | 62.980 | 66.667 | 38.81 | 0.00 | 45.70 | 2.27 |
787 | 2599 | 3.252585 | ATTTTCAGGGGGTGGGGCC | 62.253 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
788 | 2600 | 1.685765 | GATTTTCAGGGGGTGGGGC | 60.686 | 63.158 | 0.00 | 0.00 | 0.00 | 5.80 |
789 | 2601 | 0.324645 | CTGATTTTCAGGGGGTGGGG | 60.325 | 60.000 | 0.00 | 0.00 | 40.71 | 4.96 |
790 | 2602 | 3.288099 | CTGATTTTCAGGGGGTGGG | 57.712 | 57.895 | 0.00 | 0.00 | 40.71 | 4.61 |
809 | 2621 | 0.756903 | TCGCTAACTAATCAGCCCCC | 59.243 | 55.000 | 0.00 | 0.00 | 34.15 | 5.40 |
810 | 2622 | 2.417719 | CATCGCTAACTAATCAGCCCC | 58.582 | 52.381 | 0.00 | 0.00 | 34.15 | 5.80 |
811 | 2623 | 2.037251 | TCCATCGCTAACTAATCAGCCC | 59.963 | 50.000 | 0.00 | 0.00 | 34.15 | 5.19 |
812 | 2624 | 3.386768 | TCCATCGCTAACTAATCAGCC | 57.613 | 47.619 | 0.00 | 0.00 | 34.15 | 4.85 |
813 | 2625 | 3.743396 | CCTTCCATCGCTAACTAATCAGC | 59.257 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
814 | 2626 | 4.950050 | ACCTTCCATCGCTAACTAATCAG | 58.050 | 43.478 | 0.00 | 0.00 | 0.00 | 2.90 |
815 | 2627 | 5.353394 | AACCTTCCATCGCTAACTAATCA | 57.647 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
816 | 2628 | 6.074463 | CGTAAACCTTCCATCGCTAACTAATC | 60.074 | 42.308 | 0.00 | 0.00 | 0.00 | 1.75 |
817 | 2629 | 5.751990 | CGTAAACCTTCCATCGCTAACTAAT | 59.248 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
818 | 2630 | 5.104374 | CGTAAACCTTCCATCGCTAACTAA | 58.896 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
819 | 2631 | 4.158394 | ACGTAAACCTTCCATCGCTAACTA | 59.842 | 41.667 | 0.00 | 0.00 | 0.00 | 2.24 |
820 | 2632 | 3.056322 | ACGTAAACCTTCCATCGCTAACT | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
821 | 2633 | 3.256558 | ACGTAAACCTTCCATCGCTAAC | 58.743 | 45.455 | 0.00 | 0.00 | 0.00 | 2.34 |
822 | 2634 | 3.598019 | ACGTAAACCTTCCATCGCTAA | 57.402 | 42.857 | 0.00 | 0.00 | 0.00 | 3.09 |
823 | 2635 | 3.489738 | GCTACGTAAACCTTCCATCGCTA | 60.490 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
824 | 2636 | 2.737679 | GCTACGTAAACCTTCCATCGCT | 60.738 | 50.000 | 0.00 | 0.00 | 0.00 | 4.93 |
825 | 2637 | 1.591619 | GCTACGTAAACCTTCCATCGC | 59.408 | 52.381 | 0.00 | 0.00 | 0.00 | 4.58 |
826 | 2638 | 3.160777 | AGCTACGTAAACCTTCCATCG | 57.839 | 47.619 | 0.00 | 0.00 | 0.00 | 3.84 |
827 | 2639 | 5.445540 | CGAAAAGCTACGTAAACCTTCCATC | 60.446 | 44.000 | 0.00 | 0.46 | 0.00 | 3.51 |
828 | 2640 | 4.390909 | CGAAAAGCTACGTAAACCTTCCAT | 59.609 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
829 | 2641 | 3.742369 | CGAAAAGCTACGTAAACCTTCCA | 59.258 | 43.478 | 0.00 | 0.00 | 0.00 | 3.53 |
830 | 2642 | 3.742882 | ACGAAAAGCTACGTAAACCTTCC | 59.257 | 43.478 | 10.84 | 0.00 | 40.92 | 3.46 |
831 | 2643 | 4.979564 | ACGAAAAGCTACGTAAACCTTC | 57.020 | 40.909 | 10.84 | 0.00 | 40.92 | 3.46 |
845 | 2657 | 4.866486 | ACCTACGTATGGCTTTACGAAAAG | 59.134 | 41.667 | 21.49 | 15.63 | 46.02 | 2.27 |
846 | 2658 | 4.819769 | ACCTACGTATGGCTTTACGAAAA | 58.180 | 39.130 | 21.49 | 9.63 | 46.02 | 2.29 |
847 | 2659 | 4.158394 | AGACCTACGTATGGCTTTACGAAA | 59.842 | 41.667 | 21.49 | 11.41 | 46.02 | 3.46 |
848 | 2660 | 3.696051 | AGACCTACGTATGGCTTTACGAA | 59.304 | 43.478 | 21.49 | 0.00 | 46.02 | 3.85 |
849 | 2661 | 3.282021 | AGACCTACGTATGGCTTTACGA | 58.718 | 45.455 | 21.49 | 8.92 | 46.02 | 3.43 |
851 | 2663 | 4.037208 | TGCTAGACCTACGTATGGCTTTAC | 59.963 | 45.833 | 11.71 | 2.97 | 38.41 | 2.01 |
852 | 2664 | 4.209538 | TGCTAGACCTACGTATGGCTTTA | 58.790 | 43.478 | 11.71 | 0.00 | 38.41 | 1.85 |
853 | 2665 | 3.028850 | TGCTAGACCTACGTATGGCTTT | 58.971 | 45.455 | 11.71 | 0.00 | 38.41 | 3.51 |
854 | 2666 | 2.662866 | TGCTAGACCTACGTATGGCTT | 58.337 | 47.619 | 11.71 | 3.14 | 38.41 | 4.35 |
855 | 2667 | 2.359981 | TGCTAGACCTACGTATGGCT | 57.640 | 50.000 | 11.21 | 11.21 | 38.41 | 4.75 |
856 | 2668 | 3.662247 | AATGCTAGACCTACGTATGGC | 57.338 | 47.619 | 0.00 | 0.00 | 38.11 | 4.40 |
857 | 2669 | 5.815740 | ACAAAAATGCTAGACCTACGTATGG | 59.184 | 40.000 | 0.00 | 2.55 | 0.00 | 2.74 |
858 | 2670 | 6.705782 | CACAAAAATGCTAGACCTACGTATG | 58.294 | 40.000 | 0.00 | 0.00 | 0.00 | 2.39 |
859 | 2671 | 5.293569 | GCACAAAAATGCTAGACCTACGTAT | 59.706 | 40.000 | 0.00 | 0.00 | 42.62 | 3.06 |
860 | 2672 | 4.628333 | GCACAAAAATGCTAGACCTACGTA | 59.372 | 41.667 | 0.00 | 0.00 | 42.62 | 3.57 |
861 | 2673 | 3.435671 | GCACAAAAATGCTAGACCTACGT | 59.564 | 43.478 | 0.00 | 0.00 | 42.62 | 3.57 |
862 | 2674 | 4.003519 | GCACAAAAATGCTAGACCTACG | 57.996 | 45.455 | 0.00 | 0.00 | 42.62 | 3.51 |
881 | 2693 | 4.593147 | CGTGCATACGGGCTATAAAAGCA | 61.593 | 47.826 | 0.00 | 0.00 | 46.66 | 3.91 |
882 | 2694 | 2.096417 | CGTGCATACGGGCTATAAAAGC | 60.096 | 50.000 | 0.00 | 0.00 | 46.23 | 3.51 |
883 | 2695 | 3.788434 | CGTGCATACGGGCTATAAAAG | 57.212 | 47.619 | 0.00 | 0.00 | 46.23 | 2.27 |
894 | 2706 | 6.387972 | TGGGAACAAAATTCCGTGCATACG | 62.388 | 45.833 | 0.00 | 0.00 | 43.84 | 3.06 |
895 | 2707 | 3.057174 | TGGGAACAAAATTCCGTGCATAC | 60.057 | 43.478 | 0.00 | 0.00 | 39.46 | 2.39 |
896 | 2708 | 3.157881 | TGGGAACAAAATTCCGTGCATA | 58.842 | 40.909 | 0.00 | 0.00 | 39.46 | 3.14 |
897 | 2709 | 1.967066 | TGGGAACAAAATTCCGTGCAT | 59.033 | 42.857 | 0.00 | 0.00 | 39.46 | 3.96 |
898 | 2710 | 1.403814 | TGGGAACAAAATTCCGTGCA | 58.596 | 45.000 | 0.00 | 0.00 | 39.46 | 4.57 |
911 | 2723 | 6.546034 | CCGAATATATGGGGAAATATGGGAAC | 59.454 | 42.308 | 0.00 | 0.00 | 0.00 | 3.62 |
912 | 2724 | 6.354389 | CCCGAATATATGGGGAAATATGGGAA | 60.354 | 42.308 | 14.38 | 0.00 | 44.10 | 3.97 |
913 | 2725 | 5.133660 | CCCGAATATATGGGGAAATATGGGA | 59.866 | 44.000 | 14.38 | 0.00 | 44.10 | 4.37 |
914 | 2726 | 5.133660 | TCCCGAATATATGGGGAAATATGGG | 59.866 | 44.000 | 18.22 | 3.15 | 46.81 | 4.00 |
915 | 2727 | 6.260700 | TCCCGAATATATGGGGAAATATGG | 57.739 | 41.667 | 18.22 | 0.00 | 46.81 | 2.74 |
923 | 2735 | 1.066430 | CCACGTCCCGAATATATGGGG | 60.066 | 57.143 | 13.64 | 13.64 | 46.03 | 4.96 |
925 | 2737 | 3.006537 | ACTTCCACGTCCCGAATATATGG | 59.993 | 47.826 | 0.00 | 0.00 | 0.00 | 2.74 |
979 | 2791 | 2.950309 | TGCAGATTACTCCTAGGTCGTC | 59.050 | 50.000 | 9.08 | 1.84 | 0.00 | 4.20 |
980 | 2792 | 3.014304 | TGCAGATTACTCCTAGGTCGT | 57.986 | 47.619 | 9.08 | 9.96 | 0.00 | 4.34 |
981 | 2793 | 3.570125 | TCATGCAGATTACTCCTAGGTCG | 59.430 | 47.826 | 9.08 | 3.94 | 0.00 | 4.79 |
1036 | 2848 | 0.725117 | GGTACGGTGTTGTATGCTGC | 59.275 | 55.000 | 0.00 | 0.00 | 0.00 | 5.25 |
1080 | 2892 | 0.466922 | GCTGGGAGTGATGGGATTGG | 60.467 | 60.000 | 0.00 | 0.00 | 0.00 | 3.16 |
1090 | 2902 | 2.776370 | ATTGGCAGTGGCTGGGAGTG | 62.776 | 60.000 | 18.53 | 0.00 | 40.87 | 3.51 |
1168 | 2992 | 3.072944 | GCTTCTCATCTTGTTCTGCAGT | 58.927 | 45.455 | 14.67 | 0.00 | 0.00 | 4.40 |
2052 | 4911 | 4.371417 | CCATGGGCAGCACCACCT | 62.371 | 66.667 | 2.85 | 0.00 | 44.72 | 4.00 |
2076 | 4935 | 0.675633 | AATGTTCCAAGCACCTGCAC | 59.324 | 50.000 | 0.00 | 0.00 | 45.16 | 4.57 |
2193 | 5061 | 5.577835 | TCGAAATCTGGTTTTCACAACAAG | 58.422 | 37.500 | 0.00 | 0.00 | 35.73 | 3.16 |
2200 | 5068 | 5.845391 | AAAGGTTCGAAATCTGGTTTTCA | 57.155 | 34.783 | 0.00 | 0.00 | 35.73 | 2.69 |
2437 | 5466 | 3.799963 | GTCGATTAATGTGGTGCGATGTA | 59.200 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
2480 | 5510 | 3.092301 | TGAGACATGTGTACTGCTAGCT | 58.908 | 45.455 | 17.23 | 0.00 | 0.00 | 3.32 |
2617 | 5817 | 2.950990 | AGGCGATAGATATTCCCCCT | 57.049 | 50.000 | 0.00 | 0.00 | 39.76 | 4.79 |
2626 | 5826 | 7.527868 | GCATATAAATCCCCATAGGCGATAGAT | 60.528 | 40.741 | 0.00 | 0.00 | 39.76 | 1.98 |
2704 | 5904 | 7.336679 | CACCTAAATCAAGATGGTTGTGTATCA | 59.663 | 37.037 | 0.00 | 0.00 | 0.00 | 2.15 |
2780 | 6377 | 5.850557 | TCAAAGAGGCTTTGAAATCACAA | 57.149 | 34.783 | 17.45 | 0.00 | 35.69 | 3.33 |
2826 | 6423 | 8.805175 | TGCATATAATCATACATTTTCCCCTTG | 58.195 | 33.333 | 0.00 | 0.00 | 0.00 | 3.61 |
2849 | 6446 | 6.377712 | TCATGTAGGATTCAAATGAACATGCA | 59.622 | 34.615 | 15.43 | 10.05 | 35.39 | 3.96 |
3032 | 6812 | 2.707791 | TGGAGCATAGAAATCCTCAGGG | 59.292 | 50.000 | 0.00 | 0.00 | 34.04 | 4.45 |
3036 | 6816 | 7.401246 | AGGAATTATGGAGCATAGAAATCCTC | 58.599 | 38.462 | 0.00 | 0.00 | 34.04 | 3.71 |
3097 | 6878 | 1.916181 | ACCCAGAACATCCGAGGATTT | 59.084 | 47.619 | 1.12 | 1.16 | 31.62 | 2.17 |
3124 | 6905 | 2.739379 | GACAGCTGAGTAGAAGCCAAAC | 59.261 | 50.000 | 23.35 | 0.00 | 41.82 | 2.93 |
3143 | 6924 | 6.592607 | TGAAGAACCACCTTTAATATGTCGAC | 59.407 | 38.462 | 9.11 | 9.11 | 0.00 | 4.20 |
3200 | 7068 | 5.684704 | ACCATCATACTTTATGGGTGAGTG | 58.315 | 41.667 | 6.33 | 0.00 | 45.83 | 3.51 |
3425 | 7640 | 5.352284 | AGAATAAGGAATGATATAGCCGCG | 58.648 | 41.667 | 0.00 | 0.00 | 0.00 | 6.46 |
3834 | 8050 | 2.186826 | GCACACCCAAGTTGAGCGT | 61.187 | 57.895 | 3.87 | 0.00 | 0.00 | 5.07 |
3867 | 8083 | 3.207677 | GAGCATCTGCCGATTCGAT | 57.792 | 52.632 | 7.83 | 0.00 | 43.38 | 3.59 |
4079 | 8295 | 2.901839 | ACTTTTCTCGGTTAGTAGGCCA | 59.098 | 45.455 | 5.01 | 0.00 | 0.00 | 5.36 |
4590 | 10505 | 9.836864 | GGAATAAAATAGAGGGAAATTGCAAAT | 57.163 | 29.630 | 1.71 | 0.00 | 0.00 | 2.32 |
4632 | 10547 | 8.117988 | ACCATATACGTGCTTTTTATACAAACG | 58.882 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
4713 | 10757 | 1.644509 | AGGAGGGAAATTGCAAACCC | 58.355 | 50.000 | 23.44 | 23.44 | 42.36 | 4.11 |
4790 | 11007 | 6.648879 | AGAATCCCGAACTGAAATGAAAAA | 57.351 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
4888 | 11121 | 2.568509 | CCTTGTTTCCCAGCAATGGATT | 59.431 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
4968 | 11706 | 6.036191 | GCTTATGTTTCTAGTCCACTGCTTAC | 59.964 | 42.308 | 0.00 | 0.00 | 0.00 | 2.34 |
4977 | 11715 | 8.144478 | TGATACTGATGCTTATGTTTCTAGTCC | 58.856 | 37.037 | 0.00 | 0.00 | 0.00 | 3.85 |
4987 | 11725 | 6.713903 | ACCCAGAAATGATACTGATGCTTATG | 59.286 | 38.462 | 0.00 | 0.00 | 36.38 | 1.90 |
5034 | 11971 | 3.457234 | TCTCGGATGGACAAAATCATCG | 58.543 | 45.455 | 0.00 | 0.00 | 40.30 | 3.84 |
5095 | 12034 | 3.075148 | GACTCAGGTAAGCTTGTTTCCC | 58.925 | 50.000 | 9.86 | 1.12 | 0.00 | 3.97 |
5109 | 12048 | 5.618640 | GCTTAAGCTTCAACAATGACTCAGG | 60.619 | 44.000 | 20.38 | 0.00 | 34.61 | 3.86 |
5110 | 12049 | 5.388944 | GCTTAAGCTTCAACAATGACTCAG | 58.611 | 41.667 | 20.38 | 0.00 | 34.61 | 3.35 |
5127 | 12066 | 4.041240 | CGAAACTGTCGTCAAGCTTAAG | 57.959 | 45.455 | 0.00 | 0.00 | 45.09 | 1.85 |
5138 | 12077 | 4.356162 | CAGTTAACTGACGAAACTGTCG | 57.644 | 45.455 | 28.17 | 0.00 | 46.59 | 4.35 |
5142 | 12081 | 4.743644 | GTGCTACAGTTAACTGACGAAACT | 59.256 | 41.667 | 36.14 | 17.88 | 46.59 | 2.66 |
5144 | 12083 | 4.940463 | AGTGCTACAGTTAACTGACGAAA | 58.060 | 39.130 | 36.14 | 17.45 | 46.59 | 3.46 |
5145 | 12084 | 4.579454 | AGTGCTACAGTTAACTGACGAA | 57.421 | 40.909 | 36.14 | 20.35 | 46.59 | 3.85 |
5146 | 12085 | 4.037089 | TGAAGTGCTACAGTTAACTGACGA | 59.963 | 41.667 | 36.14 | 21.20 | 46.59 | 4.20 |
5147 | 12086 | 4.295870 | TGAAGTGCTACAGTTAACTGACG | 58.704 | 43.478 | 36.14 | 26.13 | 46.59 | 4.35 |
5148 | 12087 | 4.686554 | CCTGAAGTGCTACAGTTAACTGAC | 59.313 | 45.833 | 36.14 | 24.65 | 46.59 | 3.51 |
5150 | 12089 | 6.810833 | CAGCCTGAAGTGCTACAGTTAACTG | 61.811 | 48.000 | 29.76 | 29.76 | 42.61 | 3.16 |
5151 | 12090 | 3.325135 | AGCCTGAAGTGCTACAGTTAACT | 59.675 | 43.478 | 1.12 | 1.12 | 37.28 | 2.24 |
5153 | 12092 | 3.071023 | ACAGCCTGAAGTGCTACAGTTAA | 59.929 | 43.478 | 0.00 | 0.00 | 36.81 | 2.01 |
5154 | 12093 | 2.632996 | ACAGCCTGAAGTGCTACAGTTA | 59.367 | 45.455 | 0.00 | 0.00 | 36.81 | 2.24 |
5155 | 12094 | 1.417890 | ACAGCCTGAAGTGCTACAGTT | 59.582 | 47.619 | 0.00 | 0.00 | 36.81 | 3.16 |
5156 | 12095 | 1.051812 | ACAGCCTGAAGTGCTACAGT | 58.948 | 50.000 | 0.00 | 0.00 | 36.81 | 3.55 |
5157 | 12096 | 1.802960 | CAACAGCCTGAAGTGCTACAG | 59.197 | 52.381 | 0.00 | 0.00 | 36.81 | 2.74 |
5158 | 12097 | 1.140852 | ACAACAGCCTGAAGTGCTACA | 59.859 | 47.619 | 0.00 | 0.00 | 36.81 | 2.74 |
5160 | 12099 | 1.605457 | CGACAACAGCCTGAAGTGCTA | 60.605 | 52.381 | 0.00 | 0.00 | 36.81 | 3.49 |
5161 | 12100 | 0.882042 | CGACAACAGCCTGAAGTGCT | 60.882 | 55.000 | 0.00 | 0.00 | 40.41 | 4.40 |
5162 | 12101 | 0.880278 | TCGACAACAGCCTGAAGTGC | 60.880 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5163 | 12102 | 0.861837 | GTCGACAACAGCCTGAAGTG | 59.138 | 55.000 | 11.55 | 0.00 | 0.00 | 3.16 |
5164 | 12103 | 0.464036 | TGTCGACAACAGCCTGAAGT | 59.536 | 50.000 | 17.62 | 0.00 | 32.81 | 3.01 |
5165 | 12104 | 1.581934 | TTGTCGACAACAGCCTGAAG | 58.418 | 50.000 | 26.53 | 0.00 | 39.58 | 3.02 |
5175 | 12114 | 1.338973 | AGAACTAGCCGTTGTCGACAA | 59.661 | 47.619 | 26.53 | 26.53 | 39.71 | 3.18 |
5176 | 12115 | 0.956633 | AGAACTAGCCGTTGTCGACA | 59.043 | 50.000 | 15.76 | 15.76 | 39.71 | 4.35 |
5181 | 12120 | 1.961394 | TGACAGAGAACTAGCCGTTGT | 59.039 | 47.619 | 0.00 | 0.00 | 35.56 | 3.32 |
5182 | 12121 | 2.029828 | ACTGACAGAGAACTAGCCGTTG | 60.030 | 50.000 | 10.08 | 0.00 | 35.56 | 4.10 |
5185 | 12124 | 3.732471 | GCTAACTGACAGAGAACTAGCCG | 60.732 | 52.174 | 10.08 | 0.00 | 0.00 | 5.52 |
5201 | 12140 | 7.665974 | AGCAAAACTAATCCTAAACAGCTAACT | 59.334 | 33.333 | 0.00 | 0.00 | 0.00 | 2.24 |
5202 | 12141 | 7.817641 | AGCAAAACTAATCCTAAACAGCTAAC | 58.182 | 34.615 | 0.00 | 0.00 | 0.00 | 2.34 |
5203 | 12142 | 7.996098 | AGCAAAACTAATCCTAAACAGCTAA | 57.004 | 32.000 | 0.00 | 0.00 | 0.00 | 3.09 |
5204 | 12143 | 7.663905 | TGAAGCAAAACTAATCCTAAACAGCTA | 59.336 | 33.333 | 0.00 | 0.00 | 0.00 | 3.32 |
5205 | 12144 | 6.490040 | TGAAGCAAAACTAATCCTAAACAGCT | 59.510 | 34.615 | 0.00 | 0.00 | 0.00 | 4.24 |
5206 | 12145 | 6.677913 | TGAAGCAAAACTAATCCTAAACAGC | 58.322 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
5207 | 12146 | 6.803807 | GCTGAAGCAAAACTAATCCTAAACAG | 59.196 | 38.462 | 0.00 | 0.00 | 41.59 | 3.16 |
5208 | 12147 | 6.677913 | GCTGAAGCAAAACTAATCCTAAACA | 58.322 | 36.000 | 0.00 | 0.00 | 41.59 | 2.83 |
5225 | 12164 | 3.198068 | TGACCGATTATTCTGCTGAAGC | 58.802 | 45.455 | 11.86 | 0.00 | 42.50 | 3.86 |
5226 | 12165 | 3.247173 | GCTGACCGATTATTCTGCTGAAG | 59.753 | 47.826 | 11.86 | 0.00 | 35.44 | 3.02 |
5227 | 12166 | 3.118629 | AGCTGACCGATTATTCTGCTGAA | 60.119 | 43.478 | 8.59 | 8.59 | 43.18 | 3.02 |
5228 | 12167 | 2.432146 | AGCTGACCGATTATTCTGCTGA | 59.568 | 45.455 | 2.60 | 0.00 | 43.18 | 4.26 |
5231 | 12170 | 1.789464 | CGAGCTGACCGATTATTCTGC | 59.211 | 52.381 | 0.00 | 0.00 | 37.06 | 4.26 |
5232 | 12171 | 3.085443 | ACGAGCTGACCGATTATTCTG | 57.915 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
5233 | 12172 | 3.130516 | TCAACGAGCTGACCGATTATTCT | 59.869 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
5234 | 12173 | 3.444916 | TCAACGAGCTGACCGATTATTC | 58.555 | 45.455 | 0.00 | 0.00 | 0.00 | 1.75 |
5236 | 12175 | 2.427453 | ACTCAACGAGCTGACCGATTAT | 59.573 | 45.455 | 0.00 | 0.00 | 32.04 | 1.28 |
5237 | 12176 | 1.816835 | ACTCAACGAGCTGACCGATTA | 59.183 | 47.619 | 0.00 | 0.00 | 32.04 | 1.75 |
5238 | 12177 | 0.603569 | ACTCAACGAGCTGACCGATT | 59.396 | 50.000 | 0.00 | 0.00 | 32.04 | 3.34 |
5239 | 12178 | 0.603569 | AACTCAACGAGCTGACCGAT | 59.396 | 50.000 | 0.00 | 0.00 | 32.04 | 4.18 |
5240 | 12179 | 1.199327 | CTAACTCAACGAGCTGACCGA | 59.801 | 52.381 | 0.00 | 0.00 | 32.04 | 4.69 |
5241 | 12180 | 1.068472 | ACTAACTCAACGAGCTGACCG | 60.068 | 52.381 | 0.00 | 0.00 | 32.04 | 4.79 |
5242 | 12181 | 2.597520 | GACTAACTCAACGAGCTGACC | 58.402 | 52.381 | 0.00 | 0.00 | 32.04 | 4.02 |
5243 | 12182 | 2.243407 | CGACTAACTCAACGAGCTGAC | 58.757 | 52.381 | 0.00 | 0.00 | 32.04 | 3.51 |
5244 | 12183 | 1.878088 | ACGACTAACTCAACGAGCTGA | 59.122 | 47.619 | 0.00 | 0.00 | 32.04 | 4.26 |
5246 | 12185 | 1.136029 | CGACGACTAACTCAACGAGCT | 60.136 | 52.381 | 0.00 | 0.00 | 32.04 | 4.09 |
5247 | 12186 | 1.136141 | TCGACGACTAACTCAACGAGC | 60.136 | 52.381 | 0.00 | 0.00 | 32.04 | 5.03 |
5248 | 12187 | 2.760181 | CTCGACGACTAACTCAACGAG | 58.240 | 52.381 | 0.00 | 0.00 | 37.64 | 4.18 |
5249 | 12188 | 1.136141 | GCTCGACGACTAACTCAACGA | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
5250 | 12189 | 1.136029 | AGCTCGACGACTAACTCAACG | 60.136 | 52.381 | 0.00 | 0.00 | 0.00 | 4.10 |
5251 | 12190 | 2.095869 | TCAGCTCGACGACTAACTCAAC | 60.096 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5252 | 12191 | 2.148768 | TCAGCTCGACGACTAACTCAA | 58.851 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
5253 | 12192 | 1.804601 | TCAGCTCGACGACTAACTCA | 58.195 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
5254 | 12193 | 2.286536 | GGATCAGCTCGACGACTAACTC | 60.287 | 54.545 | 0.00 | 0.00 | 0.00 | 3.01 |
5255 | 12194 | 1.671845 | GGATCAGCTCGACGACTAACT | 59.328 | 52.381 | 0.00 | 0.00 | 0.00 | 2.24 |
5256 | 12195 | 1.400846 | TGGATCAGCTCGACGACTAAC | 59.599 | 52.381 | 0.00 | 0.00 | 0.00 | 2.34 |
5258 | 12197 | 1.300481 | CTGGATCAGCTCGACGACTA | 58.700 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
5259 | 12198 | 0.678366 | ACTGGATCAGCTCGACGACT | 60.678 | 55.000 | 0.00 | 0.00 | 34.37 | 4.18 |
5260 | 12199 | 0.171455 | AACTGGATCAGCTCGACGAC | 59.829 | 55.000 | 0.00 | 0.00 | 34.37 | 4.34 |
5261 | 12200 | 1.671328 | CTAACTGGATCAGCTCGACGA | 59.329 | 52.381 | 0.00 | 0.00 | 34.37 | 4.20 |
5262 | 12201 | 1.402259 | ACTAACTGGATCAGCTCGACG | 59.598 | 52.381 | 0.00 | 0.00 | 34.37 | 5.12 |
5264 | 12203 | 3.258372 | ACAAACTAACTGGATCAGCTCGA | 59.742 | 43.478 | 0.00 | 0.00 | 34.37 | 4.04 |
5265 | 12204 | 3.589988 | ACAAACTAACTGGATCAGCTCG | 58.410 | 45.455 | 0.00 | 0.00 | 34.37 | 5.03 |
5267 | 12206 | 4.624125 | GCCTACAAACTAACTGGATCAGCT | 60.624 | 45.833 | 0.00 | 0.00 | 34.37 | 4.24 |
5269 | 12208 | 4.872691 | CAGCCTACAAACTAACTGGATCAG | 59.127 | 45.833 | 0.00 | 0.00 | 37.52 | 2.90 |
5271 | 12210 | 4.192317 | CCAGCCTACAAACTAACTGGATC | 58.808 | 47.826 | 0.48 | 0.00 | 46.10 | 3.36 |
5272 | 12211 | 3.587506 | ACCAGCCTACAAACTAACTGGAT | 59.412 | 43.478 | 13.45 | 0.00 | 46.10 | 3.41 |
5273 | 12212 | 2.976882 | ACCAGCCTACAAACTAACTGGA | 59.023 | 45.455 | 13.45 | 0.00 | 46.10 | 3.86 |
5275 | 12214 | 4.002906 | TCACCAGCCTACAAACTAACTG | 57.997 | 45.455 | 0.00 | 0.00 | 0.00 | 3.16 |
5276 | 12215 | 4.620803 | CGATCACCAGCCTACAAACTAACT | 60.621 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
5277 | 12216 | 3.617263 | CGATCACCAGCCTACAAACTAAC | 59.383 | 47.826 | 0.00 | 0.00 | 0.00 | 2.34 |
5278 | 12217 | 3.259876 | ACGATCACCAGCCTACAAACTAA | 59.740 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
5279 | 12218 | 2.829720 | ACGATCACCAGCCTACAAACTA | 59.170 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
5282 | 12221 | 1.899814 | AGACGATCACCAGCCTACAAA | 59.100 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
5284 | 12223 | 0.817654 | CAGACGATCACCAGCCTACA | 59.182 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
5285 | 12224 | 0.818296 | ACAGACGATCACCAGCCTAC | 59.182 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
5286 | 12225 | 1.103803 | GACAGACGATCACCAGCCTA | 58.896 | 55.000 | 0.00 | 0.00 | 0.00 | 3.93 |
5287 | 12226 | 1.608717 | GGACAGACGATCACCAGCCT | 61.609 | 60.000 | 0.00 | 0.00 | 0.00 | 4.58 |
5288 | 12227 | 1.153549 | GGACAGACGATCACCAGCC | 60.154 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
5289 | 12228 | 1.517257 | CGGACAGACGATCACCAGC | 60.517 | 63.158 | 0.00 | 0.00 | 35.47 | 4.85 |
5290 | 12229 | 0.456824 | CACGGACAGACGATCACCAG | 60.457 | 60.000 | 0.00 | 0.00 | 37.61 | 4.00 |
5292 | 12231 | 1.153823 | CCACGGACAGACGATCACC | 60.154 | 63.158 | 0.00 | 0.00 | 37.61 | 4.02 |
5293 | 12232 | 1.153823 | CCCACGGACAGACGATCAC | 60.154 | 63.158 | 0.00 | 0.00 | 37.61 | 3.06 |
5294 | 12233 | 0.683179 | ATCCCACGGACAGACGATCA | 60.683 | 55.000 | 0.00 | 0.00 | 32.98 | 2.92 |
5295 | 12234 | 0.249073 | CATCCCACGGACAGACGATC | 60.249 | 60.000 | 0.00 | 0.00 | 32.98 | 3.69 |
5296 | 12235 | 1.676678 | CCATCCCACGGACAGACGAT | 61.677 | 60.000 | 0.00 | 0.00 | 32.98 | 3.73 |
5297 | 12236 | 2.348104 | CCATCCCACGGACAGACGA | 61.348 | 63.158 | 0.00 | 0.00 | 32.98 | 4.20 |
5298 | 12237 | 2.184322 | CCATCCCACGGACAGACG | 59.816 | 66.667 | 0.00 | 0.00 | 32.98 | 4.18 |
5302 | 12241 | 4.386951 | CACGCCATCCCACGGACA | 62.387 | 66.667 | 0.00 | 0.00 | 32.98 | 4.02 |
5305 | 12244 | 4.838152 | CTCCACGCCATCCCACGG | 62.838 | 72.222 | 0.00 | 0.00 | 0.00 | 4.94 |
5306 | 12245 | 1.744320 | TATCTCCACGCCATCCCACG | 61.744 | 60.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5307 | 12246 | 0.468226 | TTATCTCCACGCCATCCCAC | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 4.61 |
5308 | 12247 | 0.468226 | GTTATCTCCACGCCATCCCA | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
5309 | 12248 | 0.600255 | CGTTATCTCCACGCCATCCC | 60.600 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
5317 | 12256 | 0.645868 | GCTTCGTGCGTTATCTCCAC | 59.354 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
5318 | 12257 | 0.245266 | TGCTTCGTGCGTTATCTCCA | 59.755 | 50.000 | 0.00 | 0.00 | 46.63 | 3.86 |
5319 | 12258 | 0.645868 | GTGCTTCGTGCGTTATCTCC | 59.354 | 55.000 | 0.00 | 0.00 | 46.63 | 3.71 |
5320 | 12259 | 0.294887 | CGTGCTTCGTGCGTTATCTC | 59.705 | 55.000 | 0.00 | 0.00 | 46.63 | 2.75 |
5322 | 12261 | 1.343821 | CCGTGCTTCGTGCGTTATC | 59.656 | 57.895 | 1.89 | 0.00 | 46.63 | 1.75 |
5323 | 12262 | 2.736682 | GCCGTGCTTCGTGCGTTAT | 61.737 | 57.895 | 1.89 | 0.00 | 46.63 | 1.89 |
5324 | 12263 | 3.408020 | GCCGTGCTTCGTGCGTTA | 61.408 | 61.111 | 1.89 | 0.00 | 46.63 | 3.18 |
5327 | 12266 | 4.505217 | GATGCCGTGCTTCGTGCG | 62.505 | 66.667 | 0.00 | 0.00 | 46.63 | 5.34 |
5328 | 12267 | 2.637715 | GATGATGCCGTGCTTCGTGC | 62.638 | 60.000 | 9.96 | 5.25 | 43.25 | 5.34 |
5329 | 12268 | 1.349627 | GATGATGCCGTGCTTCGTG | 59.650 | 57.895 | 9.96 | 0.00 | 35.83 | 4.35 |
5330 | 12269 | 0.673333 | TTGATGATGCCGTGCTTCGT | 60.673 | 50.000 | 6.30 | 6.30 | 35.83 | 3.85 |
5331 | 12270 | 0.027194 | CTTGATGATGCCGTGCTTCG | 59.973 | 55.000 | 7.08 | 0.00 | 35.83 | 3.79 |
5332 | 12271 | 0.379669 | CCTTGATGATGCCGTGCTTC | 59.620 | 55.000 | 5.27 | 5.27 | 34.04 | 3.86 |
5333 | 12272 | 1.033746 | CCCTTGATGATGCCGTGCTT | 61.034 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
5334 | 12273 | 1.452651 | CCCTTGATGATGCCGTGCT | 60.453 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
5336 | 12275 | 0.107508 | ACTCCCTTGATGATGCCGTG | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
5337 | 12276 | 0.107508 | CACTCCCTTGATGATGCCGT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
5338 | 12277 | 0.816825 | CCACTCCCTTGATGATGCCG | 60.817 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
5340 | 12279 | 0.106819 | AGCCACTCCCTTGATGATGC | 60.107 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
5342 | 12281 | 1.489649 | CTGAGCCACTCCCTTGATGAT | 59.510 | 52.381 | 0.00 | 0.00 | 0.00 | 2.45 |
5343 | 12282 | 0.907486 | CTGAGCCACTCCCTTGATGA | 59.093 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
5344 | 12283 | 0.747283 | GCTGAGCCACTCCCTTGATG | 60.747 | 60.000 | 0.00 | 0.00 | 0.00 | 3.07 |
5345 | 12284 | 1.606531 | GCTGAGCCACTCCCTTGAT | 59.393 | 57.895 | 0.00 | 0.00 | 0.00 | 2.57 |
5346 | 12285 | 2.947532 | CGCTGAGCCACTCCCTTGA | 61.948 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
5347 | 12286 | 2.249413 | ATCGCTGAGCCACTCCCTTG | 62.249 | 60.000 | 0.00 | 0.00 | 0.00 | 3.61 |
5351 | 12290 | 2.279120 | CGATCGCTGAGCCACTCC | 60.279 | 66.667 | 0.26 | 0.00 | 0.00 | 3.85 |
5352 | 12291 | 1.875813 | CACGATCGCTGAGCCACTC | 60.876 | 63.158 | 16.60 | 0.00 | 0.00 | 3.51 |
5353 | 12292 | 2.182791 | CACGATCGCTGAGCCACT | 59.817 | 61.111 | 16.60 | 0.00 | 0.00 | 4.00 |
5354 | 12293 | 2.887568 | CCACGATCGCTGAGCCAC | 60.888 | 66.667 | 16.60 | 0.00 | 0.00 | 5.01 |
5355 | 12294 | 4.147449 | CCCACGATCGCTGAGCCA | 62.147 | 66.667 | 16.60 | 0.00 | 0.00 | 4.75 |
5356 | 12295 | 3.157217 | ATCCCACGATCGCTGAGCC | 62.157 | 63.158 | 16.60 | 0.00 | 0.00 | 4.70 |
5357 | 12296 | 1.953138 | CATCCCACGATCGCTGAGC | 60.953 | 63.158 | 16.60 | 0.00 | 0.00 | 4.26 |
5358 | 12297 | 1.300465 | CCATCCCACGATCGCTGAG | 60.300 | 63.158 | 16.60 | 3.98 | 0.00 | 3.35 |
5359 | 12298 | 2.814604 | CCATCCCACGATCGCTGA | 59.185 | 61.111 | 16.60 | 9.67 | 0.00 | 4.26 |
5360 | 12299 | 2.969238 | GCCATCCCACGATCGCTG | 60.969 | 66.667 | 16.60 | 12.44 | 30.63 | 5.18 |
5362 | 12301 | 3.272334 | GTGCCATCCCACGATCGC | 61.272 | 66.667 | 16.60 | 0.00 | 33.60 | 4.58 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.