Multiple sequence alignment - TraesCS2B01G150100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G150100 chr2B 100.000 7564 0 0 1 7564 116417006 116409443 0.000000e+00 13969.0
1 TraesCS2B01G150100 chr2B 88.010 784 44 18 1 741 244585494 244586270 0.000000e+00 881.0
2 TraesCS2B01G150100 chr2B 99.089 439 4 0 1086 1524 116412342 116411904 0.000000e+00 789.0
3 TraesCS2B01G150100 chr2B 99.089 439 4 0 4665 5103 116415921 116415483 0.000000e+00 789.0
4 TraesCS2B01G150100 chr2B 99.012 405 4 0 1 405 755969924 755969520 0.000000e+00 726.0
5 TraesCS2B01G150100 chr2B 95.539 269 11 1 7296 7564 22425854 22425587 5.730000e-116 429.0
6 TraesCS2B01G150100 chr2B 94.118 238 10 3 507 741 741995085 741994849 7.630000e-95 359.0
7 TraesCS2B01G150100 chr2B 100.000 157 0 0 7838 7994 116409169 116409013 2.820000e-74 291.0
8 TraesCS2B01G150100 chr2B 84.672 137 2 2 403 520 755963238 755963102 1.410000e-22 119.0
9 TraesCS2B01G150100 chr7B 96.622 3849 115 8 1257 5103 725836890 725840725 0.000000e+00 6373.0
10 TraesCS2B01G150100 chr7B 99.089 439 3 1 1086 1524 725840288 725840725 0.000000e+00 787.0
11 TraesCS2B01G150100 chr7B 99.012 405 4 0 1 405 674767650 674768054 0.000000e+00 726.0
12 TraesCS2B01G150100 chr7B 97.761 268 5 1 4836 5103 725836890 725837156 2.030000e-125 460.0
13 TraesCS2B01G150100 chr7B 94.030 268 16 0 7296 7563 700666726 700666459 2.690000e-109 407.0
14 TraesCS2B01G150100 chr7B 93.522 247 10 4 501 741 595863120 595863366 5.900000e-96 363.0
15 TraesCS2B01G150100 chr7B 96.575 146 2 3 7850 7994 502840461 502840318 1.040000e-58 239.0
16 TraesCS2B01G150100 chr7B 96.552 145 3 2 7850 7993 606183161 606183018 1.040000e-58 239.0
17 TraesCS2B01G150100 chr7B 93.168 161 6 5 7838 7994 730457632 730457473 1.730000e-56 231.0
18 TraesCS2B01G150100 chr7B 84.444 135 2 3 405 520 498164289 498164423 1.820000e-21 115.0
19 TraesCS2B01G150100 chr7B 83.942 137 3 1 403 520 595862843 595862979 6.560000e-21 113.0
20 TraesCS2B01G150100 chr7B 95.238 63 1 2 458 520 476213606 476213546 1.840000e-16 99.0
21 TraesCS2B01G150100 chr7B 85.870 92 8 4 403 493 108251592 108251679 8.540000e-15 93.5
22 TraesCS2B01G150100 chr5B 94.523 4035 186 13 1079 5109 708501548 708497545 0.000000e+00 6194.0
23 TraesCS2B01G150100 chr5B 94.904 3238 141 16 1507 4732 534267601 534270826 0.000000e+00 5044.0
24 TraesCS2B01G150100 chr5B 95.900 439 6 2 1086 1524 708497976 708497550 0.000000e+00 701.0
25 TraesCS2B01G150100 chr5B 95.900 439 6 2 4665 5103 708501540 708501114 0.000000e+00 701.0
26 TraesCS2B01G150100 chr5B 95.131 267 13 0 7296 7562 605543720 605543454 9.590000e-114 422.0
27 TraesCS2B01G150100 chr5B 94.757 267 9 2 7296 7562 447161605 447161344 2.080000e-110 411.0
28 TraesCS2B01G150100 chr5B 97.260 146 2 2 7848 7992 545946246 545946390 6.200000e-61 246.0
29 TraesCS2B01G150100 chr5B 96.575 146 2 3 7850 7994 10362868 10363011 1.040000e-58 239.0
30 TraesCS2B01G150100 chr5B 96.575 146 2 3 7850 7994 517081742 517081885 1.040000e-58 239.0
31 TraesCS2B01G150100 chr5B 96.528 144 2 3 7852 7994 550312051 550311910 1.340000e-57 235.0
32 TraesCS2B01G150100 chr5B 95.890 146 4 2 7850 7994 706915087 706915231 1.340000e-57 235.0
33 TraesCS2B01G150100 chr5B 98.214 56 1 0 465 520 702521203 702521148 1.840000e-16 99.0
34 TraesCS2B01G150100 chr7A 96.653 3137 96 4 1974 5103 9000697 9003831 0.000000e+00 5203.0
35 TraesCS2B01G150100 chr7A 93.335 3166 188 14 1577 4732 19858008 19854856 0.000000e+00 4656.0
36 TraesCS2B01G150100 chr7A 94.938 731 34 3 1086 1815 8999915 9000643 0.000000e+00 1142.0
37 TraesCS2B01G150100 chr7A 98.633 439 5 1 4665 5103 8999915 9000352 0.000000e+00 776.0
38 TraesCS2B01G150100 chr7A 98.405 439 6 1 1086 1524 9003394 9003831 0.000000e+00 771.0
39 TraesCS2B01G150100 chr3B 93.667 3174 181 12 1574 4739 778907902 778904741 0.000000e+00 4730.0
40 TraesCS2B01G150100 chr3B 93.295 3147 203 6 1574 4719 824796937 824793798 0.000000e+00 4636.0
41 TraesCS2B01G150100 chr3B 92.249 2748 210 3 1974 4719 802619379 802622125 0.000000e+00 3892.0
42 TraesCS2B01G150100 chr3B 99.259 405 3 0 1 405 765943323 765942919 0.000000e+00 732.0
43 TraesCS2B01G150100 chr3B 99.259 405 3 0 1 405 765959734 765959330 0.000000e+00 732.0
44 TraesCS2B01G150100 chr3B 99.012 405 4 0 1 405 545391317 545391721 0.000000e+00 726.0
45 TraesCS2B01G150100 chr3B 94.505 273 14 1 7290 7562 21090700 21090429 3.450000e-113 420.0
46 TraesCS2B01G150100 chr3B 94.074 270 16 0 7293 7562 30923876 30924145 2.080000e-110 411.0
47 TraesCS2B01G150100 chr3B 94.538 238 9 3 506 740 774176414 774176650 1.640000e-96 364.0
48 TraesCS2B01G150100 chr3B 95.516 223 8 1 520 740 765948053 765947831 9.870000e-94 355.0
49 TraesCS2B01G150100 chr3B 96.622 148 2 3 7848 7994 567403628 567403483 8.010000e-60 243.0
50 TraesCS2B01G150100 chr3B 95.862 145 3 3 7852 7994 695861531 695861388 1.730000e-56 231.0
51 TraesCS2B01G150100 chr3B 96.825 63 0 2 458 520 28304686 28304746 3.950000e-18 104.0
52 TraesCS2B01G150100 chr3B 82.014 139 4 8 403 520 28299222 28299360 1.840000e-16 99.0
53 TraesCS2B01G150100 chr4B 92.522 2768 188 10 1974 4732 568614513 568611756 0.000000e+00 3947.0
54 TraesCS2B01G150100 chr4B 98.765 405 5 0 1 405 91191989 91191585 0.000000e+00 721.0
55 TraesCS2B01G150100 chr4B 94.776 268 11 1 7295 7562 40606091 40605827 1.610000e-111 414.0
56 TraesCS2B01G150100 chr4B 96.047 253 10 0 7298 7550 650950515 650950263 5.770000e-111 412.0
57 TraesCS2B01G150100 chr4B 94.052 269 15 1 7296 7564 656243599 656243866 2.690000e-109 407.0
58 TraesCS2B01G150100 chr4B 94.030 268 14 2 7296 7562 593748326 593748592 9.660000e-109 405.0
59 TraesCS2B01G150100 chr4B 96.575 146 3 2 7850 7994 40605810 40605666 2.880000e-59 241.0
60 TraesCS2B01G150100 chr4B 95.890 146 3 3 7850 7994 587133902 587134045 4.820000e-57 233.0
61 TraesCS2B01G150100 chr4B 95.890 146 3 3 7850 7994 660254271 660254414 4.820000e-57 233.0
62 TraesCS2B01G150100 chr4B 98.387 62 1 0 403 464 12045608 12045669 8.480000e-20 110.0
63 TraesCS2B01G150100 chr4B 82.482 137 5 1 403 520 91216655 91216519 1.420000e-17 102.0
64 TraesCS2B01G150100 chr2D 93.091 2200 130 15 5104 7298 75750884 75753066 0.000000e+00 3201.0
65 TraesCS2B01G150100 chr2D 92.910 268 19 0 7296 7563 623322406 623322139 2.700000e-104 390.0
66 TraesCS2B01G150100 chr2D 88.779 303 16 5 801 1085 75750586 75750888 9.870000e-94 355.0
67 TraesCS2B01G150100 chr2D 98.387 62 1 0 403 464 83126700 83126639 8.480000e-20 110.0
68 TraesCS2B01G150100 chr2A 92.524 2207 139 15 5104 7296 75644270 75642076 0.000000e+00 3138.0
69 TraesCS2B01G150100 chr2A 86.911 764 97 3 1572 2333 764126175 764125413 0.000000e+00 854.0
70 TraesCS2B01G150100 chr2A 93.010 515 13 9 6799 7298 75639334 75638828 0.000000e+00 730.0
71 TraesCS2B01G150100 chr2A 90.000 300 14 8 801 1085 75644564 75644266 2.720000e-99 374.0
72 TraesCS2B01G150100 chr3A 90.393 687 65 1 1571 2256 699920827 699921513 0.000000e+00 902.0
73 TraesCS2B01G150100 chr5A 87.801 623 76 0 1574 2196 555604588 555603966 0.000000e+00 730.0
74 TraesCS2B01G150100 chr6B 99.012 405 4 0 1 405 15726958 15726554 0.000000e+00 726.0
75 TraesCS2B01G150100 chr6B 98.765 405 5 0 1 405 293977197 293976793 0.000000e+00 721.0
76 TraesCS2B01G150100 chr6B 94.245 278 14 2 7286 7562 612747647 612747923 2.670000e-114 424.0
77 TraesCS2B01G150100 chr6B 88.579 359 14 10 405 742 703668468 703668116 2.080000e-110 411.0
78 TraesCS2B01G150100 chr6B 94.030 268 14 1 7296 7563 689534670 689534935 9.660000e-109 405.0
79 TraesCS2B01G150100 chr6B 96.429 224 6 1 519 740 15720765 15720542 1.270000e-97 368.0
80 TraesCS2B01G150100 chr6B 94.268 157 7 2 7839 7994 125176827 125176982 1.040000e-58 239.0
81 TraesCS2B01G150100 chr6B 95.918 147 3 3 7849 7994 94236866 94237010 1.340000e-57 235.0
82 TraesCS2B01G150100 chr6B 92.994 157 9 2 7839 7994 35254914 35255069 2.240000e-55 228.0
83 TraesCS2B01G150100 chr6B 95.238 63 1 1 458 520 123740077 123740137 1.840000e-16 99.0
84 TraesCS2B01G150100 chr4A 82.850 758 89 27 1 753 732414580 732413859 6.760000e-180 641.0
85 TraesCS2B01G150100 chr4A 92.701 274 15 4 7296 7564 708435349 708435622 2.700000e-104 390.0
86 TraesCS2B01G150100 chr4A 93.627 204 10 3 4901 5103 733873534 733873735 1.300000e-77 302.0
87 TraesCS2B01G150100 chr4A 98.387 62 1 0 403 464 5564403 5564342 8.480000e-20 110.0
88 TraesCS2B01G150100 chrUn 94.776 268 11 1 7296 7563 87291801 87291537 1.610000e-111 414.0
89 TraesCS2B01G150100 chrUn 94.595 259 14 0 7293 7551 467301261 467301519 1.250000e-107 401.0
90 TraesCS2B01G150100 chrUn 93.680 269 14 1 7296 7564 70860041 70859776 4.490000e-107 399.0
91 TraesCS2B01G150100 chrUn 92.193 269 18 2 7293 7561 240286287 240286552 2.110000e-100 377.0
92 TraesCS2B01G150100 chrUn 93.952 248 14 1 7296 7542 70818669 70818422 2.720000e-99 374.0
93 TraesCS2B01G150100 chrUn 93.469 245 11 4 501 742 329570965 329570723 7.630000e-95 359.0
94 TraesCS2B01G150100 chrUn 92.063 252 20 0 7297 7548 79218773 79218522 9.870000e-94 355.0
95 TraesCS2B01G150100 chrUn 92.683 246 18 0 7297 7542 381333593 381333348 9.870000e-94 355.0
96 TraesCS2B01G150100 chrUn 90.074 272 24 2 7295 7563 312426279 312426550 4.590000e-92 350.0
97 TraesCS2B01G150100 chrUn 90.189 265 24 2 7297 7561 295273651 295273389 2.140000e-90 344.0
98 TraesCS2B01G150100 chrUn 99.425 174 1 0 1085 1258 87885177 87885350 4.660000e-82 316.0
99 TraesCS2B01G150100 chrUn 99.422 173 1 0 4665 4837 87885178 87885350 1.670000e-81 315.0
100 TraesCS2B01G150100 chrUn 95.862 145 4 2 7851 7994 188893703 188893560 4.820000e-57 233.0
101 TraesCS2B01G150100 chrUn 95.205 146 5 2 7850 7994 87291517 87291373 6.240000e-56 230.0
102 TraesCS2B01G150100 chrUn 95.205 146 4 3 7850 7994 21232598 21232455 2.240000e-55 228.0
103 TraesCS2B01G150100 chrUn 95.172 145 5 2 7851 7994 188929473 188929330 2.240000e-55 228.0
104 TraesCS2B01G150100 chrUn 95.205 146 4 3 7850 7994 423083730 423083587 2.240000e-55 228.0
105 TraesCS2B01G150100 chrUn 96.377 138 3 2 7858 7994 79218507 79218371 8.070000e-55 226.0
106 TraesCS2B01G150100 chrUn 95.172 145 4 3 7851 7994 95750669 95750811 8.070000e-55 226.0
107 TraesCS2B01G150100 chrUn 94.521 146 6 2 7850 7994 70859760 70859616 2.900000e-54 224.0
108 TraesCS2B01G150100 chrUn 94.595 148 3 3 7850 7994 97823941 97823796 2.900000e-54 224.0
109 TraesCS2B01G150100 chrUn 92.994 157 5 3 7843 7994 99622772 99622617 2.900000e-54 224.0
110 TraesCS2B01G150100 chrUn 93.421 152 7 3 7840 7989 91145200 91145350 1.040000e-53 222.0
111 TraesCS2B01G150100 chrUn 98.387 62 1 0 403 464 313610373 313610312 8.480000e-20 110.0
112 TraesCS2B01G150100 chr1B 94.052 269 15 1 7295 7562 21648929 21649197 2.690000e-109 407.0
113 TraesCS2B01G150100 chr1B 93.727 271 16 1 7293 7562 447565140 447565410 9.660000e-109 405.0
114 TraesCS2B01G150100 chr1B 93.407 273 17 1 7290 7562 49225692 49225963 3.470000e-108 403.0
115 TraesCS2B01G150100 chr1B 93.361 241 14 2 520 759 296064070 296063831 9.870000e-94 355.0
116 TraesCS2B01G150100 chr1B 96.575 146 2 3 7850 7994 634329090 634329233 1.040000e-58 239.0
117 TraesCS2B01G150100 chr1D 92.279 272 19 2 7292 7563 19276605 19276874 1.260000e-102 385.0
118 TraesCS2B01G150100 chr1D 92.164 268 21 0 7296 7563 409340870 409341137 5.850000e-101 379.0
119 TraesCS2B01G150100 chr1D 91.078 269 23 1 7295 7563 30398376 30398643 5.900000e-96 363.0
120 TraesCS2B01G150100 chr1D 95.890 146 3 3 7850 7994 445932365 445932222 4.820000e-57 233.0
121 TraesCS2B01G150100 chr1D 95.270 148 2 3 7850 7994 22478877 22479022 6.240000e-56 230.0
122 TraesCS2B01G150100 chr1D 95.238 147 3 3 7850 7994 443596005 443595861 6.240000e-56 230.0
123 TraesCS2B01G150100 chr1D 93.548 155 6 2 7843 7994 20770090 20769937 2.240000e-55 228.0
124 TraesCS2B01G150100 chr1D 93.548 155 6 3 7843 7994 453260899 453260746 2.240000e-55 228.0
125 TraesCS2B01G150100 chr1D 92.547 161 7 3 7838 7994 485536845 485536686 8.070000e-55 226.0
126 TraesCS2B01G150100 chr6D 90.741 270 22 3 7295 7563 60816178 60815911 2.740000e-94 357.0
127 TraesCS2B01G150100 chr6D 89.818 275 24 3 7292 7563 54538013 54538286 4.590000e-92 350.0
128 TraesCS2B01G150100 chr6D 89.781 274 26 2 7291 7563 70540123 70540395 4.590000e-92 350.0
129 TraesCS2B01G150100 chr6D 93.082 159 5 4 7839 7994 298326248 298326093 2.240000e-55 228.0
130 TraesCS2B01G150100 chr6D 92.994 157 5 3 7843 7994 8468459 8468304 2.900000e-54 224.0
131 TraesCS2B01G150100 chr6D 92.994 157 5 3 7843 7994 79748369 79748214 2.900000e-54 224.0
132 TraesCS2B01G150100 chr6D 92.994 157 5 3 7843 7994 394575165 394575320 2.900000e-54 224.0
133 TraesCS2B01G150100 chr6D 86.207 145 10 8 1422 1562 38209837 38209699 1.800000e-31 148.0
134 TraesCS2B01G150100 chr4D 90.146 274 25 1 7290 7563 461498632 461498903 9.870000e-94 355.0
135 TraesCS2B01G150100 chr4D 89.818 275 26 2 7289 7563 457392931 457392659 1.280000e-92 351.0
136 TraesCS2B01G150100 chr4D 89.706 272 27 1 7292 7563 505595958 505596228 5.940000e-91 346.0
137 TraesCS2B01G150100 chr4D 95.205 146 4 3 7850 7994 441103343 441103200 2.240000e-55 228.0
138 TraesCS2B01G150100 chr4D 95.205 146 4 3 7850 7994 484551935 484551792 2.240000e-55 228.0
139 TraesCS2B01G150100 chr4D 94.079 152 4 3 7846 7994 420269639 420269490 8.070000e-55 226.0
140 TraesCS2B01G150100 chr4D 92.903 155 7 2 7843 7994 45227507 45227660 1.040000e-53 222.0
141 TraesCS2B01G150100 chr4D 92.405 158 9 3 7839 7994 447256882 447257038 1.040000e-53 222.0
142 TraesCS2B01G150100 chr3D 94.340 159 5 4 7838 7994 35436659 35436815 2.880000e-59 241.0
143 TraesCS2B01G150100 chr3D 88.608 79 5 4 1298 1374 568583032 568583108 8.540000e-15 93.5
144 TraesCS2B01G150100 chr3D 88.608 79 5 4 4877 4953 568583032 568583108 8.540000e-15 93.5
145 TraesCS2B01G150100 chr5D 95.890 146 3 3 7850 7994 2973919 2974062 4.820000e-57 233.0
146 TraesCS2B01G150100 chr5D 95.890 146 3 3 7850 7994 432537942 432538085 4.820000e-57 233.0
147 TraesCS2B01G150100 chr5D 93.038 158 8 3 7839 7994 256208980 256209136 2.240000e-55 228.0
148 TraesCS2B01G150100 chr6A 92.763 152 8 3 1379 1529 613797068 613796919 4.860000e-52 217.0
149 TraesCS2B01G150100 chr6A 96.970 66 1 1 403 468 145220364 145220428 8.480000e-20 110.0
150 TraesCS2B01G150100 chr6A 98.387 62 1 0 403 464 492801952 492801891 8.480000e-20 110.0
151 TraesCS2B01G150100 chr1A 85.897 78 8 3 1086 1161 12598505 12598429 6.650000e-11 80.5
152 TraesCS2B01G150100 chr1A 86.076 79 5 6 1086 1163 12668729 12668656 6.650000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G150100 chr2B 116409013 116417006 7993 True 7130 13969 100.000000 1 7994 2 chr2B.!!$R5 7993
1 TraesCS2B01G150100 chr2B 244585494 244586270 776 False 881 881 88.010000 1 741 1 chr2B.!!$F1 740
2 TraesCS2B01G150100 chr2B 116411904 116415921 4017 True 789 789 99.089000 1086 5103 2 chr2B.!!$R6 4017
3 TraesCS2B01G150100 chr7B 725836890 725840725 3835 False 2540 6373 97.824000 1086 5103 3 chr7B.!!$F5 4017
4 TraesCS2B01G150100 chr7B 595862843 595863366 523 False 238 363 88.732000 403 741 2 chr7B.!!$F4 338
5 TraesCS2B01G150100 chr5B 534267601 534270826 3225 False 5044 5044 94.904000 1507 4732 1 chr5B.!!$F3 3225
6 TraesCS2B01G150100 chr5B 708497545 708501548 4003 True 2532 6194 95.441000 1079 5109 3 chr5B.!!$R5 4030
7 TraesCS2B01G150100 chr7A 19854856 19858008 3152 True 4656 4656 93.335000 1577 4732 1 chr7A.!!$R1 3155
8 TraesCS2B01G150100 chr7A 8999915 9003831 3916 False 1973 5203 97.157250 1086 5103 4 chr7A.!!$F1 4017
9 TraesCS2B01G150100 chr3B 778904741 778907902 3161 True 4730 4730 93.667000 1574 4739 1 chr3B.!!$R7 3165
10 TraesCS2B01G150100 chr3B 824793798 824796937 3139 True 4636 4636 93.295000 1574 4719 1 chr3B.!!$R8 3145
11 TraesCS2B01G150100 chr3B 802619379 802622125 2746 False 3892 3892 92.249000 1974 4719 1 chr3B.!!$F6 2745
12 TraesCS2B01G150100 chr4B 568611756 568614513 2757 True 3947 3947 92.522000 1974 4732 1 chr4B.!!$R3 2758
13 TraesCS2B01G150100 chr2D 75750586 75753066 2480 False 1778 3201 90.935000 801 7298 2 chr2D.!!$F1 6497
14 TraesCS2B01G150100 chr2A 75638828 75644564 5736 True 1414 3138 91.844667 801 7298 3 chr2A.!!$R2 6497
15 TraesCS2B01G150100 chr2A 764125413 764126175 762 True 854 854 86.911000 1572 2333 1 chr2A.!!$R1 761
16 TraesCS2B01G150100 chr3A 699920827 699921513 686 False 902 902 90.393000 1571 2256 1 chr3A.!!$F1 685
17 TraesCS2B01G150100 chr5A 555603966 555604588 622 True 730 730 87.801000 1574 2196 1 chr5A.!!$R1 622
18 TraesCS2B01G150100 chr4A 732413859 732414580 721 True 641 641 82.850000 1 753 1 chr4A.!!$R2 752

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
782 786 0.039978 AAGCGGATCGTATCGAGCAG 60.040 55.000 9.42 6.48 44.41 4.24 F
785 789 0.796927 CGGATCGTATCGAGCAGCTA 59.203 55.000 9.42 0.00 44.41 3.32 F
786 790 1.201976 CGGATCGTATCGAGCAGCTAG 60.202 57.143 9.42 0.00 44.41 3.42 F
1053 1084 1.260544 GCTTCAAGGGAGCCAACATT 58.739 50.000 0.00 0.00 0.00 2.71 F
5379 5435 1.956170 CAGCAACCACGTCTTCGCT 60.956 57.895 0.00 0.00 41.18 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
5129 5176 0.979665 TTTGAGAGTCTCCTGGCCAG 59.020 55.0 26.87 26.87 0.00 4.85 R
5183 5230 0.744414 CGTGCCATTGGAGGATTCGT 60.744 55.0 6.95 0.00 0.00 3.85 R
5184 5231 1.439353 CCGTGCCATTGGAGGATTCG 61.439 60.0 6.95 1.35 0.00 3.34 R
5442 5498 0.308684 AGACGACGCTGTTGACGTTA 59.691 50.0 0.00 0.00 45.24 3.18 R
7524 10830 0.032615 ACAAAAACCCCAGCACCTGA 60.033 50.0 0.00 0.00 32.44 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 7.375834 TGACTAAATTGATGACGTACTGACTT 58.624 34.615 0.00 0.00 0.00 3.01
284 288 1.134401 GTCGGTGGACATGGTGATGAT 60.134 52.381 0.00 0.00 42.91 2.45
452 456 3.109592 AAAGGAACGACGGTGGGCA 62.110 57.895 0.00 0.00 0.00 5.36
479 483 3.241520 GCCAGCTAGGGTTAGGGG 58.758 66.667 4.65 0.00 38.09 4.79
480 484 1.384082 GCCAGCTAGGGTTAGGGGA 60.384 63.158 4.65 0.00 38.09 4.81
481 485 1.697082 GCCAGCTAGGGTTAGGGGAC 61.697 65.000 4.65 0.00 38.09 4.46
482 486 0.326238 CCAGCTAGGGTTAGGGGACA 60.326 60.000 0.00 0.00 0.00 4.02
483 487 0.831307 CAGCTAGGGTTAGGGGACAC 59.169 60.000 0.00 0.00 0.00 3.67
484 488 0.326332 AGCTAGGGTTAGGGGACACC 60.326 60.000 0.00 0.00 40.67 4.16
485 489 1.683418 GCTAGGGTTAGGGGACACCG 61.683 65.000 0.00 0.00 46.96 4.94
486 490 1.683418 CTAGGGTTAGGGGACACCGC 61.683 65.000 0.00 0.00 46.96 5.68
487 491 2.458969 TAGGGTTAGGGGACACCGCA 62.459 60.000 7.53 0.00 46.96 5.69
488 492 2.046604 GGTTAGGGGACACCGCAC 60.047 66.667 7.53 0.00 46.96 5.34
489 493 2.745037 GTTAGGGGACACCGCACA 59.255 61.111 7.53 0.00 46.96 4.57
490 494 1.670083 GTTAGGGGACACCGCACAC 60.670 63.158 7.53 0.32 46.96 3.82
491 495 1.839747 TTAGGGGACACCGCACACT 60.840 57.895 7.53 0.00 46.96 3.55
492 496 1.412453 TTAGGGGACACCGCACACTT 61.412 55.000 7.53 0.00 46.96 3.16
493 497 0.542467 TAGGGGACACCGCACACTTA 60.542 55.000 7.53 0.00 46.96 2.24
494 498 1.198759 AGGGGACACCGCACACTTAT 61.199 55.000 7.53 0.00 46.96 1.73
495 499 0.538118 GGGGACACCGCACACTTATA 59.462 55.000 0.00 0.00 37.78 0.98
496 500 1.140252 GGGGACACCGCACACTTATAT 59.860 52.381 0.00 0.00 37.78 0.86
497 501 2.366266 GGGGACACCGCACACTTATATA 59.634 50.000 0.00 0.00 37.78 0.86
498 502 3.554337 GGGGACACCGCACACTTATATAG 60.554 52.174 0.00 0.00 37.78 1.31
499 503 3.319972 GGGACACCGCACACTTATATAGA 59.680 47.826 0.00 0.00 0.00 1.98
500 504 4.296690 GGACACCGCACACTTATATAGAC 58.703 47.826 0.00 0.00 0.00 2.59
501 505 3.961182 ACACCGCACACTTATATAGACG 58.039 45.455 0.00 0.00 0.00 4.18
502 506 2.724690 CACCGCACACTTATATAGACGC 59.275 50.000 0.00 0.00 0.00 5.19
503 507 2.359848 ACCGCACACTTATATAGACGCA 59.640 45.455 0.00 0.00 0.00 5.24
504 508 2.980476 CCGCACACTTATATAGACGCAG 59.020 50.000 0.00 0.00 0.00 5.18
505 509 2.405357 CGCACACTTATATAGACGCAGC 59.595 50.000 0.00 0.00 0.00 5.25
506 510 2.731976 GCACACTTATATAGACGCAGCC 59.268 50.000 0.00 0.00 0.00 4.85
507 511 2.980476 CACACTTATATAGACGCAGCCG 59.020 50.000 0.00 0.00 41.14 5.52
508 512 1.986378 CACTTATATAGACGCAGCCGC 59.014 52.381 0.00 0.00 38.22 6.53
554 558 4.214327 GGAGAAGGAGGGCGCGAG 62.214 72.222 12.10 0.00 0.00 5.03
555 559 4.214327 GAGAAGGAGGGCGCGAGG 62.214 72.222 12.10 0.00 0.00 4.63
565 569 4.882396 GCGCGAGGGCCTCTTCTC 62.882 72.222 29.81 13.49 35.02 2.87
566 570 3.144193 CGCGAGGGCCTCTTCTCT 61.144 66.667 29.81 0.00 35.02 3.10
567 571 2.716017 CGCGAGGGCCTCTTCTCTT 61.716 63.158 29.81 0.00 35.02 2.85
568 572 1.142965 GCGAGGGCCTCTTCTCTTC 59.857 63.158 29.81 3.42 0.00 2.87
569 573 1.326951 GCGAGGGCCTCTTCTCTTCT 61.327 60.000 29.81 0.00 0.00 2.85
570 574 0.744281 CGAGGGCCTCTTCTCTTCTC 59.256 60.000 29.81 1.86 0.00 2.87
571 575 1.859302 GAGGGCCTCTTCTCTTCTCA 58.141 55.000 26.44 0.00 0.00 3.27
572 576 2.183679 GAGGGCCTCTTCTCTTCTCAA 58.816 52.381 26.44 0.00 0.00 3.02
573 577 2.569404 GAGGGCCTCTTCTCTTCTCAAA 59.431 50.000 26.44 0.00 0.00 2.69
574 578 2.304470 AGGGCCTCTTCTCTTCTCAAAC 59.696 50.000 0.00 0.00 0.00 2.93
575 579 2.304470 GGGCCTCTTCTCTTCTCAAACT 59.696 50.000 0.84 0.00 0.00 2.66
576 580 3.595173 GGCCTCTTCTCTTCTCAAACTC 58.405 50.000 0.00 0.00 0.00 3.01
577 581 3.595173 GCCTCTTCTCTTCTCAAACTCC 58.405 50.000 0.00 0.00 0.00 3.85
578 582 3.007398 GCCTCTTCTCTTCTCAAACTCCA 59.993 47.826 0.00 0.00 0.00 3.86
579 583 4.503991 GCCTCTTCTCTTCTCAAACTCCAA 60.504 45.833 0.00 0.00 0.00 3.53
580 584 5.802821 GCCTCTTCTCTTCTCAAACTCCAAT 60.803 44.000 0.00 0.00 0.00 3.16
581 585 6.575254 GCCTCTTCTCTTCTCAAACTCCAATA 60.575 42.308 0.00 0.00 0.00 1.90
582 586 7.041107 CCTCTTCTCTTCTCAAACTCCAATAG 58.959 42.308 0.00 0.00 0.00 1.73
583 587 6.402222 TCTTCTCTTCTCAAACTCCAATAGC 58.598 40.000 0.00 0.00 0.00 2.97
584 588 5.745312 TCTCTTCTCAAACTCCAATAGCA 57.255 39.130 0.00 0.00 0.00 3.49
585 589 6.305272 TCTCTTCTCAAACTCCAATAGCAT 57.695 37.500 0.00 0.00 0.00 3.79
586 590 6.111382 TCTCTTCTCAAACTCCAATAGCATG 58.889 40.000 0.00 0.00 0.00 4.06
587 591 5.809001 TCTTCTCAAACTCCAATAGCATGT 58.191 37.500 0.00 0.00 0.00 3.21
588 592 6.946340 TCTTCTCAAACTCCAATAGCATGTA 58.054 36.000 0.00 0.00 0.00 2.29
589 593 7.044181 TCTTCTCAAACTCCAATAGCATGTAG 58.956 38.462 0.00 0.00 0.00 2.74
590 594 6.544928 TCTCAAACTCCAATAGCATGTAGA 57.455 37.500 0.00 0.00 0.00 2.59
591 595 6.946340 TCTCAAACTCCAATAGCATGTAGAA 58.054 36.000 0.00 0.00 0.00 2.10
592 596 7.044181 TCTCAAACTCCAATAGCATGTAGAAG 58.956 38.462 0.00 0.00 0.00 2.85
593 597 6.946340 TCAAACTCCAATAGCATGTAGAAGA 58.054 36.000 0.00 0.00 0.00 2.87
594 598 7.044181 TCAAACTCCAATAGCATGTAGAAGAG 58.956 38.462 0.00 0.00 0.00 2.85
595 599 4.954875 ACTCCAATAGCATGTAGAAGAGC 58.045 43.478 0.00 0.00 0.00 4.09
596 600 4.202305 ACTCCAATAGCATGTAGAAGAGCC 60.202 45.833 0.00 0.00 0.00 4.70
597 601 3.711190 TCCAATAGCATGTAGAAGAGCCA 59.289 43.478 0.00 0.00 0.00 4.75
598 602 4.349048 TCCAATAGCATGTAGAAGAGCCAT 59.651 41.667 0.00 0.00 0.00 4.40
599 603 4.694509 CCAATAGCATGTAGAAGAGCCATC 59.305 45.833 0.00 0.00 0.00 3.51
600 604 2.926778 AGCATGTAGAAGAGCCATCC 57.073 50.000 0.00 0.00 0.00 3.51
601 605 2.406559 AGCATGTAGAAGAGCCATCCT 58.593 47.619 0.00 0.00 0.00 3.24
602 606 2.776536 AGCATGTAGAAGAGCCATCCTT 59.223 45.455 0.00 0.00 0.00 3.36
603 607 3.969976 AGCATGTAGAAGAGCCATCCTTA 59.030 43.478 0.00 0.00 0.00 2.69
604 608 4.596643 AGCATGTAGAAGAGCCATCCTTAT 59.403 41.667 0.00 0.00 0.00 1.73
605 609 5.782331 AGCATGTAGAAGAGCCATCCTTATA 59.218 40.000 0.00 0.00 0.00 0.98
606 610 6.270927 AGCATGTAGAAGAGCCATCCTTATAA 59.729 38.462 0.00 0.00 0.00 0.98
607 611 6.936900 GCATGTAGAAGAGCCATCCTTATAAA 59.063 38.462 0.00 0.00 0.00 1.40
608 612 7.095017 GCATGTAGAAGAGCCATCCTTATAAAC 60.095 40.741 0.00 0.00 0.00 2.01
609 613 6.827727 TGTAGAAGAGCCATCCTTATAAACC 58.172 40.000 0.00 0.00 0.00 3.27
610 614 5.975988 AGAAGAGCCATCCTTATAAACCA 57.024 39.130 0.00 0.00 0.00 3.67
611 615 5.685728 AGAAGAGCCATCCTTATAAACCAC 58.314 41.667 0.00 0.00 0.00 4.16
612 616 5.430089 AGAAGAGCCATCCTTATAAACCACT 59.570 40.000 0.00 0.00 0.00 4.00
613 617 5.297569 AGAGCCATCCTTATAAACCACTC 57.702 43.478 0.00 0.00 0.00 3.51
614 618 4.103311 AGAGCCATCCTTATAAACCACTCC 59.897 45.833 0.00 0.00 0.00 3.85
615 619 3.785887 AGCCATCCTTATAAACCACTCCA 59.214 43.478 0.00 0.00 0.00 3.86
616 620 4.229582 AGCCATCCTTATAAACCACTCCAA 59.770 41.667 0.00 0.00 0.00 3.53
617 621 4.338400 GCCATCCTTATAAACCACTCCAAC 59.662 45.833 0.00 0.00 0.00 3.77
618 622 5.755849 CCATCCTTATAAACCACTCCAACT 58.244 41.667 0.00 0.00 0.00 3.16
619 623 6.187682 CCATCCTTATAAACCACTCCAACTT 58.812 40.000 0.00 0.00 0.00 2.66
620 624 6.663523 CCATCCTTATAAACCACTCCAACTTT 59.336 38.462 0.00 0.00 0.00 2.66
621 625 7.148069 CCATCCTTATAAACCACTCCAACTTTC 60.148 40.741 0.00 0.00 0.00 2.62
622 626 6.243148 TCCTTATAAACCACTCCAACTTTCC 58.757 40.000 0.00 0.00 0.00 3.13
623 627 6.045106 TCCTTATAAACCACTCCAACTTTCCT 59.955 38.462 0.00 0.00 0.00 3.36
624 628 6.719829 CCTTATAAACCACTCCAACTTTCCTT 59.280 38.462 0.00 0.00 0.00 3.36
625 629 7.094334 CCTTATAAACCACTCCAACTTTCCTTC 60.094 40.741 0.00 0.00 0.00 3.46
626 630 2.658807 ACCACTCCAACTTTCCTTCC 57.341 50.000 0.00 0.00 0.00 3.46
627 631 1.850345 ACCACTCCAACTTTCCTTCCA 59.150 47.619 0.00 0.00 0.00 3.53
628 632 2.230660 CCACTCCAACTTTCCTTCCAC 58.769 52.381 0.00 0.00 0.00 4.02
629 633 2.158608 CCACTCCAACTTTCCTTCCACT 60.159 50.000 0.00 0.00 0.00 4.00
630 634 3.072476 CCACTCCAACTTTCCTTCCACTA 59.928 47.826 0.00 0.00 0.00 2.74
631 635 4.319177 CACTCCAACTTTCCTTCCACTAG 58.681 47.826 0.00 0.00 0.00 2.57
632 636 3.244596 ACTCCAACTTTCCTTCCACTAGC 60.245 47.826 0.00 0.00 0.00 3.42
633 637 2.708861 TCCAACTTTCCTTCCACTAGCA 59.291 45.455 0.00 0.00 0.00 3.49
634 638 3.330701 TCCAACTTTCCTTCCACTAGCAT 59.669 43.478 0.00 0.00 0.00 3.79
635 639 3.441572 CCAACTTTCCTTCCACTAGCATG 59.558 47.826 0.00 0.00 0.00 4.06
636 640 3.356529 ACTTTCCTTCCACTAGCATGG 57.643 47.619 0.00 0.00 41.57 3.66
637 641 2.644798 ACTTTCCTTCCACTAGCATGGT 59.355 45.455 1.62 1.62 40.95 3.55
646 650 3.627395 CACTAGCATGGTGGGACTAAA 57.373 47.619 13.14 0.00 44.63 1.85
647 651 3.270877 CACTAGCATGGTGGGACTAAAC 58.729 50.000 13.14 0.00 44.63 2.01
648 652 3.055094 CACTAGCATGGTGGGACTAAACT 60.055 47.826 13.14 0.00 44.63 2.66
649 653 3.587506 ACTAGCATGGTGGGACTAAACTT 59.412 43.478 13.14 0.00 0.00 2.66
650 654 3.073274 AGCATGGTGGGACTAAACTTC 57.927 47.619 0.00 0.00 0.00 3.01
651 655 2.092323 GCATGGTGGGACTAAACTTCC 58.908 52.381 0.00 0.00 0.00 3.46
658 662 2.195741 GGACTAAACTTCCCACCACC 57.804 55.000 0.00 0.00 0.00 4.61
659 663 1.703513 GGACTAAACTTCCCACCACCT 59.296 52.381 0.00 0.00 0.00 4.00
660 664 2.107726 GGACTAAACTTCCCACCACCTT 59.892 50.000 0.00 0.00 0.00 3.50
661 665 3.146847 GACTAAACTTCCCACCACCTTG 58.853 50.000 0.00 0.00 0.00 3.61
662 666 2.512476 ACTAAACTTCCCACCACCTTGT 59.488 45.455 0.00 0.00 0.00 3.16
663 667 2.067365 AAACTTCCCACCACCTTGTC 57.933 50.000 0.00 0.00 0.00 3.18
664 668 0.923358 AACTTCCCACCACCTTGTCA 59.077 50.000 0.00 0.00 0.00 3.58
665 669 1.149101 ACTTCCCACCACCTTGTCAT 58.851 50.000 0.00 0.00 0.00 3.06
666 670 1.202927 ACTTCCCACCACCTTGTCATG 60.203 52.381 0.00 0.00 0.00 3.07
667 671 0.539438 TTCCCACCACCTTGTCATGC 60.539 55.000 0.00 0.00 0.00 4.06
668 672 1.978617 CCCACCACCTTGTCATGCC 60.979 63.158 0.00 0.00 0.00 4.40
669 673 1.228521 CCACCACCTTGTCATGCCA 60.229 57.895 0.00 0.00 0.00 4.92
670 674 1.526575 CCACCACCTTGTCATGCCAC 61.527 60.000 0.00 0.00 0.00 5.01
671 675 1.228552 ACCACCTTGTCATGCCACC 60.229 57.895 0.00 0.00 0.00 4.61
672 676 1.075482 CCACCTTGTCATGCCACCT 59.925 57.895 0.00 0.00 0.00 4.00
673 677 0.327924 CCACCTTGTCATGCCACCTA 59.672 55.000 0.00 0.00 0.00 3.08
674 678 1.453155 CACCTTGTCATGCCACCTAC 58.547 55.000 0.00 0.00 0.00 3.18
675 679 1.064003 ACCTTGTCATGCCACCTACA 58.936 50.000 0.00 0.00 0.00 2.74
676 680 1.635487 ACCTTGTCATGCCACCTACAT 59.365 47.619 0.00 0.00 0.00 2.29
677 681 2.019249 CCTTGTCATGCCACCTACATG 58.981 52.381 0.00 0.00 45.08 3.21
680 684 3.786656 TCATGCCACCTACATGAGC 57.213 52.632 0.00 0.00 46.77 4.26
681 685 0.181114 TCATGCCACCTACATGAGCC 59.819 55.000 0.00 0.00 46.77 4.70
682 686 0.820891 CATGCCACCTACATGAGCCC 60.821 60.000 0.00 0.00 46.33 5.19
683 687 0.990282 ATGCCACCTACATGAGCCCT 60.990 55.000 0.00 0.00 0.00 5.19
684 688 1.207488 TGCCACCTACATGAGCCCTT 61.207 55.000 0.00 0.00 0.00 3.95
685 689 0.837272 GCCACCTACATGAGCCCTTA 59.163 55.000 0.00 0.00 0.00 2.69
686 690 1.202698 GCCACCTACATGAGCCCTTAG 60.203 57.143 0.00 0.00 0.00 2.18
687 691 2.398588 CCACCTACATGAGCCCTTAGA 58.601 52.381 0.00 0.00 0.00 2.10
688 692 2.366916 CCACCTACATGAGCCCTTAGAG 59.633 54.545 0.00 0.00 0.00 2.43
689 693 3.300388 CACCTACATGAGCCCTTAGAGA 58.700 50.000 0.00 0.00 0.00 3.10
690 694 3.900601 CACCTACATGAGCCCTTAGAGAT 59.099 47.826 0.00 0.00 0.00 2.75
691 695 4.021544 CACCTACATGAGCCCTTAGAGATC 60.022 50.000 0.00 0.00 0.00 2.75
692 696 4.155709 CCTACATGAGCCCTTAGAGATCA 58.844 47.826 0.00 0.00 0.00 2.92
693 697 4.590647 CCTACATGAGCCCTTAGAGATCAA 59.409 45.833 0.00 0.00 0.00 2.57
694 698 5.070981 CCTACATGAGCCCTTAGAGATCAAA 59.929 44.000 0.00 0.00 0.00 2.69
695 699 5.643421 ACATGAGCCCTTAGAGATCAAAT 57.357 39.130 0.00 0.00 0.00 2.32
696 700 5.619220 ACATGAGCCCTTAGAGATCAAATC 58.381 41.667 0.00 0.00 0.00 2.17
697 701 5.369110 ACATGAGCCCTTAGAGATCAAATCT 59.631 40.000 0.00 0.00 43.70 2.40
698 702 5.287674 TGAGCCCTTAGAGATCAAATCTG 57.712 43.478 0.00 0.00 40.38 2.90
699 703 4.964897 TGAGCCCTTAGAGATCAAATCTGA 59.035 41.667 0.00 0.00 40.38 3.27
700 704 5.426509 TGAGCCCTTAGAGATCAAATCTGAA 59.573 40.000 0.00 0.00 40.38 3.02
701 705 6.070021 TGAGCCCTTAGAGATCAAATCTGAAA 60.070 38.462 0.00 0.00 40.38 2.69
702 706 6.909076 AGCCCTTAGAGATCAAATCTGAAAT 58.091 36.000 0.00 0.00 40.38 2.17
703 707 7.352738 AGCCCTTAGAGATCAAATCTGAAATT 58.647 34.615 0.00 0.00 40.38 1.82
704 708 7.284944 AGCCCTTAGAGATCAAATCTGAAATTG 59.715 37.037 0.00 1.39 40.38 2.32
705 709 7.067981 GCCCTTAGAGATCAAATCTGAAATTGT 59.932 37.037 0.00 0.00 40.38 2.71
706 710 8.619546 CCCTTAGAGATCAAATCTGAAATTGTC 58.380 37.037 0.00 4.73 40.38 3.18
707 711 9.170734 CCTTAGAGATCAAATCTGAAATTGTCA 57.829 33.333 0.00 0.00 40.38 3.58
712 716 9.894783 GAGATCAAATCTGAAATTGTCATATGG 57.105 33.333 2.13 0.00 40.38 2.74
713 717 8.857098 AGATCAAATCTGAAATTGTCATATGGG 58.143 33.333 2.13 0.00 38.44 4.00
714 718 6.808829 TCAAATCTGAAATTGTCATATGGGC 58.191 36.000 2.13 0.00 35.07 5.36
715 719 6.608405 TCAAATCTGAAATTGTCATATGGGCT 59.392 34.615 2.13 0.00 35.07 5.19
716 720 6.645790 AATCTGAAATTGTCATATGGGCTC 57.354 37.500 2.13 0.00 35.07 4.70
717 721 5.378230 TCTGAAATTGTCATATGGGCTCT 57.622 39.130 2.13 0.00 35.07 4.09
718 722 6.499106 TCTGAAATTGTCATATGGGCTCTA 57.501 37.500 2.13 0.00 35.07 2.43
719 723 6.528321 TCTGAAATTGTCATATGGGCTCTAG 58.472 40.000 2.13 0.00 35.07 2.43
720 724 5.624159 TGAAATTGTCATATGGGCTCTAGG 58.376 41.667 2.13 0.00 0.00 3.02
721 725 3.710209 ATTGTCATATGGGCTCTAGGC 57.290 47.619 2.13 0.00 40.90 3.93
731 735 2.521103 GCTCTAGGCCCATCTCACA 58.479 57.895 0.00 0.00 34.27 3.58
732 736 1.055040 GCTCTAGGCCCATCTCACAT 58.945 55.000 0.00 0.00 34.27 3.21
733 737 1.419387 GCTCTAGGCCCATCTCACATT 59.581 52.381 0.00 0.00 34.27 2.71
734 738 2.158696 GCTCTAGGCCCATCTCACATTT 60.159 50.000 0.00 0.00 34.27 2.32
735 739 3.737850 CTCTAGGCCCATCTCACATTTC 58.262 50.000 0.00 0.00 0.00 2.17
736 740 3.114606 TCTAGGCCCATCTCACATTTCA 58.885 45.455 0.00 0.00 0.00 2.69
737 741 2.905415 AGGCCCATCTCACATTTCAA 57.095 45.000 0.00 0.00 0.00 2.69
738 742 2.450476 AGGCCCATCTCACATTTCAAC 58.550 47.619 0.00 0.00 0.00 3.18
739 743 2.170166 GGCCCATCTCACATTTCAACA 58.830 47.619 0.00 0.00 0.00 3.33
740 744 2.165030 GGCCCATCTCACATTTCAACAG 59.835 50.000 0.00 0.00 0.00 3.16
741 745 3.084039 GCCCATCTCACATTTCAACAGA 58.916 45.455 0.00 0.00 0.00 3.41
742 746 3.119708 GCCCATCTCACATTTCAACAGAC 60.120 47.826 0.00 0.00 0.00 3.51
743 747 4.074259 CCCATCTCACATTTCAACAGACA 58.926 43.478 0.00 0.00 0.00 3.41
744 748 4.703575 CCCATCTCACATTTCAACAGACAT 59.296 41.667 0.00 0.00 0.00 3.06
745 749 5.184479 CCCATCTCACATTTCAACAGACATT 59.816 40.000 0.00 0.00 0.00 2.71
746 750 6.375174 CCCATCTCACATTTCAACAGACATTA 59.625 38.462 0.00 0.00 0.00 1.90
747 751 7.246311 CCATCTCACATTTCAACAGACATTAC 58.754 38.462 0.00 0.00 0.00 1.89
748 752 7.094677 CCATCTCACATTTCAACAGACATTACA 60.095 37.037 0.00 0.00 0.00 2.41
749 753 7.800155 TCTCACATTTCAACAGACATTACAA 57.200 32.000 0.00 0.00 0.00 2.41
750 754 7.639039 TCTCACATTTCAACAGACATTACAAC 58.361 34.615 0.00 0.00 0.00 3.32
751 755 7.281999 TCTCACATTTCAACAGACATTACAACA 59.718 33.333 0.00 0.00 0.00 3.33
752 756 7.766283 TCACATTTCAACAGACATTACAACAA 58.234 30.769 0.00 0.00 0.00 2.83
753 757 7.914871 TCACATTTCAACAGACATTACAACAAG 59.085 33.333 0.00 0.00 0.00 3.16
754 758 7.167968 CACATTTCAACAGACATTACAACAAGG 59.832 37.037 0.00 0.00 0.00 3.61
755 759 5.766150 TTCAACAGACATTACAACAAGGG 57.234 39.130 0.00 0.00 0.00 3.95
756 760 5.042463 TCAACAGACATTACAACAAGGGA 57.958 39.130 0.00 0.00 0.00 4.20
757 761 5.441500 TCAACAGACATTACAACAAGGGAA 58.558 37.500 0.00 0.00 0.00 3.97
758 762 5.530915 TCAACAGACATTACAACAAGGGAAG 59.469 40.000 0.00 0.00 0.00 3.46
759 763 5.304686 ACAGACATTACAACAAGGGAAGA 57.695 39.130 0.00 0.00 0.00 2.87
760 764 5.690865 ACAGACATTACAACAAGGGAAGAA 58.309 37.500 0.00 0.00 0.00 2.52
761 765 6.126409 ACAGACATTACAACAAGGGAAGAAA 58.874 36.000 0.00 0.00 0.00 2.52
762 766 6.039382 ACAGACATTACAACAAGGGAAGAAAC 59.961 38.462 0.00 0.00 0.00 2.78
763 767 6.039270 CAGACATTACAACAAGGGAAGAAACA 59.961 38.462 0.00 0.00 0.00 2.83
764 768 6.605594 AGACATTACAACAAGGGAAGAAACAA 59.394 34.615 0.00 0.00 0.00 2.83
765 769 6.805713 ACATTACAACAAGGGAAGAAACAAG 58.194 36.000 0.00 0.00 0.00 3.16
766 770 3.801114 ACAACAAGGGAAGAAACAAGC 57.199 42.857 0.00 0.00 0.00 4.01
767 771 2.099098 ACAACAAGGGAAGAAACAAGCG 59.901 45.455 0.00 0.00 0.00 4.68
768 772 1.318576 ACAAGGGAAGAAACAAGCGG 58.681 50.000 0.00 0.00 0.00 5.52
769 773 1.133915 ACAAGGGAAGAAACAAGCGGA 60.134 47.619 0.00 0.00 0.00 5.54
770 774 2.162681 CAAGGGAAGAAACAAGCGGAT 58.837 47.619 0.00 0.00 0.00 4.18
771 775 2.115343 AGGGAAGAAACAAGCGGATC 57.885 50.000 0.00 0.00 0.00 3.36
772 776 0.727398 GGGAAGAAACAAGCGGATCG 59.273 55.000 0.00 0.00 0.00 3.69
773 777 1.439679 GGAAGAAACAAGCGGATCGT 58.560 50.000 0.00 0.00 0.00 3.73
774 778 2.613691 GGAAGAAACAAGCGGATCGTA 58.386 47.619 0.00 0.00 0.00 3.43
775 779 3.195661 GGAAGAAACAAGCGGATCGTAT 58.804 45.455 0.00 0.00 0.00 3.06
776 780 3.245519 GGAAGAAACAAGCGGATCGTATC 59.754 47.826 0.00 0.00 0.00 2.24
777 781 2.460918 AGAAACAAGCGGATCGTATCG 58.539 47.619 0.00 0.00 0.00 2.92
778 782 2.098607 AGAAACAAGCGGATCGTATCGA 59.901 45.455 0.00 0.00 41.13 3.59
779 783 2.121116 AACAAGCGGATCGTATCGAG 57.879 50.000 0.00 0.00 39.91 4.04
780 784 0.317938 ACAAGCGGATCGTATCGAGC 60.318 55.000 0.00 0.00 41.76 5.03
781 785 0.317854 CAAGCGGATCGTATCGAGCA 60.318 55.000 9.42 0.00 44.41 4.26
782 786 0.039978 AAGCGGATCGTATCGAGCAG 60.040 55.000 9.42 6.48 44.41 4.24
783 787 4.138722 CGGATCGTATCGAGCAGC 57.861 61.111 9.42 0.00 44.41 5.25
784 788 1.576920 CGGATCGTATCGAGCAGCT 59.423 57.895 9.42 0.00 44.41 4.24
785 789 0.796927 CGGATCGTATCGAGCAGCTA 59.203 55.000 9.42 0.00 44.41 3.32
786 790 1.201976 CGGATCGTATCGAGCAGCTAG 60.202 57.143 9.42 0.00 44.41 3.42
787 791 1.466697 GGATCGTATCGAGCAGCTAGC 60.467 57.143 6.62 6.62 44.41 3.42
798 802 1.285578 GCAGCTAGCTAGTGTCAAGC 58.714 55.000 18.86 10.37 41.15 4.01
885 896 2.133553 CGCCATAGTTCATCAGCTCAG 58.866 52.381 0.00 0.00 0.00 3.35
887 898 2.485124 GCCATAGTTCATCAGCTCAGCT 60.485 50.000 0.00 0.00 40.77 4.24
936 964 3.507622 AGCAGATCGATCGATATCCAACA 59.492 43.478 29.45 0.00 34.60 3.33
976 1007 3.308323 GCTTCTAAACATCTTCCTCAGCG 59.692 47.826 0.00 0.00 0.00 5.18
1019 1050 2.203126 GGCTGCCGGAGAAGATGG 60.203 66.667 5.05 0.00 0.00 3.51
1032 1063 2.656560 AAGATGGGTTCGTCTTCTCG 57.343 50.000 0.00 0.00 43.62 4.04
1053 1084 1.260544 GCTTCAAGGGAGCCAACATT 58.739 50.000 0.00 0.00 0.00 2.71
5187 5234 2.259204 CCGCTACGGTTCCACGAA 59.741 61.111 0.00 0.00 42.73 3.85
5348 5404 2.551270 CGTCTTCAACAGCGCCAC 59.449 61.111 2.29 0.00 0.00 5.01
5379 5435 1.956170 CAGCAACCACGTCTTCGCT 60.956 57.895 0.00 0.00 41.18 4.93
5433 5489 2.726691 CGACATCGACGCCAACCAC 61.727 63.158 0.00 0.00 43.02 4.16
5442 5498 2.359478 GCCAACCACGTCGGGATT 60.359 61.111 0.00 0.00 40.22 3.01
5491 5547 4.832608 CCACCGCCGGCTTCTACC 62.833 72.222 26.68 0.00 0.00 3.18
5529 5585 0.468226 TCAACGCCTTGAACCTCACT 59.532 50.000 0.00 0.00 33.20 3.41
5602 5658 0.319555 CAACGTCACCATGTCTCCGT 60.320 55.000 0.00 0.00 0.00 4.69
5655 5711 0.671251 CTGCCATCTACGACCTCTCC 59.329 60.000 0.00 0.00 0.00 3.71
5676 5732 2.202756 GTGATCACCGAGGACGCC 60.203 66.667 15.31 0.00 38.29 5.68
5796 5852 2.208132 TCCGAAATTTGCCAAGGCTA 57.792 45.000 12.96 1.22 42.51 3.93
5830 5886 0.689623 CAAGCCTCAGTCCAAGGTCT 59.310 55.000 0.00 0.00 36.21 3.85
5943 5999 2.099263 CGAGCTACGAGAAGATTGGGAA 59.901 50.000 0.00 0.00 45.77 3.97
5946 6002 3.118956 AGCTACGAGAAGATTGGGAAGTG 60.119 47.826 0.00 0.00 0.00 3.16
6165 6221 0.392461 GCATAGGACGGCTCCAACAA 60.392 55.000 0.00 0.00 39.39 2.83
6216 6272 3.179433 GCGAAAAGGCCAACTGTTC 57.821 52.632 5.01 0.00 39.62 3.18
6345 6404 1.106351 AGATCATCAGAGGCGTCGCT 61.106 55.000 18.11 2.78 0.00 4.93
6489 6548 2.238942 TGTATGACCATGGCATCGAC 57.761 50.000 20.47 15.74 0.00 4.20
6528 6587 2.487265 GGTTGGCACCATAGGATACCTG 60.487 54.545 0.00 0.00 43.61 4.00
6606 6665 6.625740 CGTTTGGCATATTCATCCTTGAAGTT 60.626 38.462 0.00 0.00 44.75 2.66
6636 6695 0.598065 AACGGCCAATCAAGCAAGAC 59.402 50.000 2.24 0.00 0.00 3.01
6684 6743 0.674895 ATCGGGTTCTTGAGCACTGC 60.675 55.000 0.00 0.00 0.00 4.40
6703 6762 1.065199 GCCACAATGGATCACTCCTCA 60.065 52.381 0.00 0.00 40.96 3.86
6744 6803 6.349300 ACTCCATGGTGAGTATGATGTAAAC 58.651 40.000 20.43 0.00 43.65 2.01
6783 6842 1.342074 AGCTTGGACTACTGTGCTCA 58.658 50.000 0.00 0.00 35.45 4.26
6824 6883 1.014352 CCTACCATGCGCCAAGTAAC 58.986 55.000 4.18 0.00 0.00 2.50
6847 6906 3.468063 ACCTTGACGGTGACCCTC 58.532 61.111 0.00 0.00 46.80 4.30
6894 6953 2.094182 GGACACCAACTTCGAGATGCTA 60.094 50.000 0.00 0.00 0.00 3.49
6928 10219 1.138661 ACGAAGGTTTTGACCCGTACA 59.861 47.619 0.00 0.00 0.00 2.90
7001 10300 1.561542 GGGTGGAAGATGACTCCATGT 59.438 52.381 0.00 0.00 35.82 3.21
7034 10333 2.412089 CCTTTTTGGCTCTCGTAAGACG 59.588 50.000 0.00 0.00 45.01 4.18
7220 10526 1.547372 TGTTCGGGTTAGTAGGCACTC 59.453 52.381 0.00 0.00 41.75 3.51
7234 10540 2.910319 AGGCACTCTATTGTAACACCCA 59.090 45.455 0.00 0.00 0.00 4.51
7269 10575 6.537660 GCCGAAAGTAATAATTCTACCAGTGT 59.462 38.462 0.00 0.00 0.00 3.55
7298 10604 9.472361 GTATGTAACGACATTAATGTATCCACT 57.528 33.333 20.83 6.62 44.18 4.00
7300 10606 9.692749 ATGTAACGACATTAATGTATCCACTAG 57.307 33.333 20.83 7.82 44.18 2.57
7301 10607 8.689061 TGTAACGACATTAATGTATCCACTAGT 58.311 33.333 20.83 8.36 41.95 2.57
7304 10610 8.687292 ACGACATTAATGTATCCACTAGTAGA 57.313 34.615 20.83 0.00 41.95 2.59
7305 10611 9.128404 ACGACATTAATGTATCCACTAGTAGAA 57.872 33.333 20.83 0.00 41.95 2.10
7306 10612 9.961265 CGACATTAATGTATCCACTAGTAGAAA 57.039 33.333 20.83 0.00 41.95 2.52
7313 10619 7.179076 TGTATCCACTAGTAGAAAAAGGACC 57.821 40.000 3.59 0.00 0.00 4.46
7314 10620 6.958192 TGTATCCACTAGTAGAAAAAGGACCT 59.042 38.462 3.59 0.00 0.00 3.85
7315 10621 8.117956 TGTATCCACTAGTAGAAAAAGGACCTA 58.882 37.037 3.59 0.00 0.00 3.08
7316 10622 9.145442 GTATCCACTAGTAGAAAAAGGACCTAT 57.855 37.037 3.59 0.00 0.00 2.57
7317 10623 8.625467 ATCCACTAGTAGAAAAAGGACCTATT 57.375 34.615 3.59 0.00 0.00 1.73
7318 10624 7.848128 TCCACTAGTAGAAAAAGGACCTATTG 58.152 38.462 3.59 0.00 0.00 1.90
7319 10625 7.456902 TCCACTAGTAGAAAAAGGACCTATTGT 59.543 37.037 3.59 0.00 0.00 2.71
7320 10626 7.764901 CCACTAGTAGAAAAAGGACCTATTGTC 59.235 40.741 3.59 0.00 43.67 3.18
7333 10639 5.301835 ACCTATTGTCCTGATTCATGAGG 57.698 43.478 0.00 0.00 31.89 3.86
7334 10640 4.103785 ACCTATTGTCCTGATTCATGAGGG 59.896 45.833 0.00 0.00 31.52 4.30
7335 10641 2.425143 TTGTCCTGATTCATGAGGGC 57.575 50.000 0.00 0.00 36.25 5.19
7336 10642 0.548031 TGTCCTGATTCATGAGGGCC 59.452 55.000 0.00 0.00 34.68 5.80
7337 10643 0.548031 GTCCTGATTCATGAGGGCCA 59.452 55.000 6.18 0.00 28.80 5.36
7338 10644 1.144503 GTCCTGATTCATGAGGGCCAT 59.855 52.381 6.18 0.00 28.80 4.40
7339 10645 1.854939 TCCTGATTCATGAGGGCCATT 59.145 47.619 6.18 0.00 31.52 3.16
7340 10646 2.245546 TCCTGATTCATGAGGGCCATTT 59.754 45.455 6.18 0.00 31.52 2.32
7341 10647 2.364324 CCTGATTCATGAGGGCCATTTG 59.636 50.000 6.18 0.00 31.94 2.32
7342 10648 3.028850 CTGATTCATGAGGGCCATTTGT 58.971 45.455 6.18 0.00 31.94 2.83
7343 10649 3.025978 TGATTCATGAGGGCCATTTGTC 58.974 45.455 6.18 0.00 31.94 3.18
7344 10650 1.851304 TTCATGAGGGCCATTTGTCC 58.149 50.000 6.18 0.00 31.94 4.02
7345 10651 0.033208 TCATGAGGGCCATTTGTCCC 60.033 55.000 6.18 0.00 42.94 4.46
7349 10655 2.283604 GGGCCATTTGTCCCGGTT 60.284 61.111 4.39 0.00 32.00 4.44
7350 10656 1.911269 GGGCCATTTGTCCCGGTTT 60.911 57.895 4.39 0.00 32.00 3.27
7351 10657 1.476845 GGGCCATTTGTCCCGGTTTT 61.477 55.000 4.39 0.00 32.00 2.43
7352 10658 0.394938 GGCCATTTGTCCCGGTTTTT 59.605 50.000 0.00 0.00 0.00 1.94
7353 10659 1.507562 GCCATTTGTCCCGGTTTTTG 58.492 50.000 0.00 0.00 0.00 2.44
7354 10660 1.069358 GCCATTTGTCCCGGTTTTTGA 59.931 47.619 0.00 0.00 0.00 2.69
7355 10661 2.483889 GCCATTTGTCCCGGTTTTTGAA 60.484 45.455 0.00 0.00 0.00 2.69
7356 10662 3.805457 GCCATTTGTCCCGGTTTTTGAAT 60.805 43.478 0.00 0.00 0.00 2.57
7357 10663 3.993736 CCATTTGTCCCGGTTTTTGAATC 59.006 43.478 0.00 0.00 0.00 2.52
7358 10664 3.357166 TTTGTCCCGGTTTTTGAATCG 57.643 42.857 0.00 0.00 0.00 3.34
7359 10665 1.240256 TGTCCCGGTTTTTGAATCGG 58.760 50.000 0.00 3.94 41.90 4.18
7363 10669 1.530323 CCGGTTTTTGAATCGGGACT 58.470 50.000 3.00 0.00 38.93 3.85
7364 10670 2.702261 CCGGTTTTTGAATCGGGACTA 58.298 47.619 3.00 0.00 38.93 2.59
7365 10671 3.075884 CCGGTTTTTGAATCGGGACTAA 58.924 45.455 3.00 0.00 38.93 2.24
7366 10672 3.502979 CCGGTTTTTGAATCGGGACTAAA 59.497 43.478 3.00 0.00 38.93 1.85
7367 10673 4.379082 CCGGTTTTTGAATCGGGACTAAAG 60.379 45.833 3.00 0.00 38.93 1.85
7368 10674 4.214758 CGGTTTTTGAATCGGGACTAAAGT 59.785 41.667 0.00 0.00 0.00 2.66
7369 10675 5.458015 GGTTTTTGAATCGGGACTAAAGTG 58.542 41.667 0.00 0.00 0.00 3.16
7370 10676 5.009310 GGTTTTTGAATCGGGACTAAAGTGT 59.991 40.000 0.00 0.00 0.00 3.55
7371 10677 5.934935 TTTTGAATCGGGACTAAAGTGTC 57.065 39.130 0.00 0.00 36.31 3.67
7372 10678 3.226346 TGAATCGGGACTAAAGTGTCG 57.774 47.619 0.00 0.00 37.81 4.35
7373 10679 2.094390 TGAATCGGGACTAAAGTGTCGG 60.094 50.000 0.00 0.00 37.81 4.79
7374 10680 1.553706 ATCGGGACTAAAGTGTCGGT 58.446 50.000 0.00 0.00 37.81 4.69
7375 10681 2.198827 TCGGGACTAAAGTGTCGGTA 57.801 50.000 0.00 0.00 37.81 4.02
7376 10682 1.812571 TCGGGACTAAAGTGTCGGTAC 59.187 52.381 0.00 0.00 37.81 3.34
7377 10683 1.815003 CGGGACTAAAGTGTCGGTACT 59.185 52.381 0.00 0.00 37.81 2.73
7378 10684 3.009723 CGGGACTAAAGTGTCGGTACTA 58.990 50.000 0.00 0.00 37.81 1.82
7379 10685 3.440173 CGGGACTAAAGTGTCGGTACTAA 59.560 47.826 0.00 0.00 37.81 2.24
7380 10686 4.096984 CGGGACTAAAGTGTCGGTACTAAT 59.903 45.833 0.00 0.00 37.81 1.73
7381 10687 5.346522 GGGACTAAAGTGTCGGTACTAATG 58.653 45.833 0.00 0.00 37.81 1.90
7382 10688 4.802563 GGACTAAAGTGTCGGTACTAATGC 59.197 45.833 0.00 0.00 37.81 3.56
7383 10689 4.752146 ACTAAAGTGTCGGTACTAATGCC 58.248 43.478 0.00 0.00 0.00 4.40
7384 10690 2.685850 AAGTGTCGGTACTAATGCCC 57.314 50.000 0.00 0.00 0.00 5.36
7385 10691 1.861982 AGTGTCGGTACTAATGCCCT 58.138 50.000 0.00 0.00 0.00 5.19
7386 10692 3.022557 AGTGTCGGTACTAATGCCCTA 57.977 47.619 0.00 0.00 0.00 3.53
7387 10693 3.368248 AGTGTCGGTACTAATGCCCTAA 58.632 45.455 0.00 0.00 0.00 2.69
7388 10694 3.770933 AGTGTCGGTACTAATGCCCTAAA 59.229 43.478 0.00 0.00 0.00 1.85
7389 10695 3.867493 GTGTCGGTACTAATGCCCTAAAC 59.133 47.826 0.00 0.00 0.00 2.01
7390 10696 3.118665 TGTCGGTACTAATGCCCTAAACC 60.119 47.826 0.00 0.00 0.00 3.27
7391 10697 3.133542 GTCGGTACTAATGCCCTAAACCT 59.866 47.826 0.00 0.00 0.00 3.50
7392 10698 3.776417 TCGGTACTAATGCCCTAAACCTT 59.224 43.478 0.00 0.00 0.00 3.50
7393 10699 4.225717 TCGGTACTAATGCCCTAAACCTTT 59.774 41.667 0.00 0.00 0.00 3.11
7394 10700 5.424895 TCGGTACTAATGCCCTAAACCTTTA 59.575 40.000 0.00 0.00 0.00 1.85
7395 10701 5.756833 CGGTACTAATGCCCTAAACCTTTAG 59.243 44.000 0.00 0.00 39.80 1.85
7396 10702 6.631088 CGGTACTAATGCCCTAAACCTTTAGT 60.631 42.308 4.50 0.00 38.73 2.24
7397 10703 7.114754 GGTACTAATGCCCTAAACCTTTAGTT 58.885 38.462 4.50 0.00 41.81 2.24
7399 10705 7.698506 ACTAATGCCCTAAACCTTTAGTTTC 57.301 36.000 4.50 0.00 45.85 2.78
7400 10706 5.638596 AATGCCCTAAACCTTTAGTTTCG 57.361 39.130 4.50 0.00 45.85 3.46
7401 10707 3.414269 TGCCCTAAACCTTTAGTTTCGG 58.586 45.455 4.50 2.71 45.85 4.30
7402 10708 3.181441 TGCCCTAAACCTTTAGTTTCGGT 60.181 43.478 7.74 0.00 45.85 4.69
7403 10709 3.822735 GCCCTAAACCTTTAGTTTCGGTT 59.177 43.478 7.74 0.00 45.85 4.44
7404 10710 4.083110 GCCCTAAACCTTTAGTTTCGGTTC 60.083 45.833 7.74 0.00 45.85 3.62
7405 10711 5.311265 CCCTAAACCTTTAGTTTCGGTTCT 58.689 41.667 7.74 0.00 45.85 3.01
7406 10712 5.766670 CCCTAAACCTTTAGTTTCGGTTCTT 59.233 40.000 7.74 0.00 45.85 2.52
7407 10713 6.293790 CCCTAAACCTTTAGTTTCGGTTCTTG 60.294 42.308 7.74 0.00 45.85 3.02
7408 10714 4.563337 AACCTTTAGTTTCGGTTCTTGC 57.437 40.909 0.00 0.00 36.32 4.01
7409 10715 3.547746 ACCTTTAGTTTCGGTTCTTGCA 58.452 40.909 0.00 0.00 0.00 4.08
7410 10716 4.142038 ACCTTTAGTTTCGGTTCTTGCAT 58.858 39.130 0.00 0.00 0.00 3.96
7411 10717 5.310451 ACCTTTAGTTTCGGTTCTTGCATA 58.690 37.500 0.00 0.00 0.00 3.14
7412 10718 5.766174 ACCTTTAGTTTCGGTTCTTGCATAA 59.234 36.000 0.00 0.00 0.00 1.90
7413 10719 6.263617 ACCTTTAGTTTCGGTTCTTGCATAAA 59.736 34.615 0.00 0.00 0.00 1.40
7414 10720 6.581166 CCTTTAGTTTCGGTTCTTGCATAAAC 59.419 38.462 0.00 0.00 0.00 2.01
7415 10721 4.499037 AGTTTCGGTTCTTGCATAAACC 57.501 40.909 16.93 16.93 41.28 3.27
7419 10725 1.828979 GGTTCTTGCATAAACCGGGA 58.171 50.000 6.32 0.00 35.93 5.14
7420 10726 1.471287 GGTTCTTGCATAAACCGGGAC 59.529 52.381 6.32 0.00 35.93 4.46
7421 10727 2.156098 GTTCTTGCATAAACCGGGACA 58.844 47.619 6.32 0.00 0.00 4.02
7422 10728 2.554893 GTTCTTGCATAAACCGGGACAA 59.445 45.455 6.32 0.00 0.00 3.18
7423 10729 2.865079 TCTTGCATAAACCGGGACAAA 58.135 42.857 6.32 0.00 0.00 2.83
7424 10730 3.426615 TCTTGCATAAACCGGGACAAAT 58.573 40.909 6.32 0.00 0.00 2.32
7425 10731 3.192422 TCTTGCATAAACCGGGACAAATG 59.808 43.478 6.32 3.25 0.00 2.32
7426 10732 1.821753 TGCATAAACCGGGACAAATGG 59.178 47.619 6.32 0.00 0.00 3.16
7427 10733 1.136110 GCATAAACCGGGACAAATGGG 59.864 52.381 6.32 0.00 0.00 4.00
7428 10734 1.136110 CATAAACCGGGACAAATGGGC 59.864 52.381 6.32 0.00 0.00 5.36
7429 10735 0.612453 TAAACCGGGACAAATGGGCC 60.612 55.000 6.32 0.00 0.00 5.80
7430 10736 2.380571 AAACCGGGACAAATGGGCCT 62.381 55.000 6.32 0.00 0.00 5.19
7431 10737 2.037208 CCGGGACAAATGGGCCTT 59.963 61.111 4.53 0.00 0.00 4.35
7432 10738 2.052104 CCGGGACAAATGGGCCTTC 61.052 63.158 4.53 0.00 0.00 3.46
7433 10739 1.304052 CGGGACAAATGGGCCTTCA 60.304 57.895 4.53 0.00 0.00 3.02
7434 10740 1.595093 CGGGACAAATGGGCCTTCAC 61.595 60.000 4.53 0.00 0.00 3.18
7435 10741 1.595093 GGGACAAATGGGCCTTCACG 61.595 60.000 4.53 0.00 0.00 4.35
7436 10742 0.893727 GGACAAATGGGCCTTCACGT 60.894 55.000 4.53 0.00 0.00 4.49
7437 10743 0.240945 GACAAATGGGCCTTCACGTG 59.759 55.000 9.94 9.94 0.00 4.49
7438 10744 1.178534 ACAAATGGGCCTTCACGTGG 61.179 55.000 17.00 0.00 0.00 4.94
7473 10779 2.941583 GGGAGGAGGCCCTTTGGT 60.942 66.667 0.00 0.00 44.53 3.67
7474 10780 2.677848 GGAGGAGGCCCTTTGGTC 59.322 66.667 0.00 0.00 44.53 4.02
7475 10781 2.677848 GAGGAGGCCCTTTGGTCC 59.322 66.667 0.00 0.00 44.53 4.46
7476 10782 2.941583 AGGAGGCCCTTTGGTCCC 60.942 66.667 0.00 0.00 40.78 4.46
7477 10783 4.426313 GGAGGCCCTTTGGTCCCG 62.426 72.222 0.00 0.00 36.69 5.14
7478 10784 4.426313 GAGGCCCTTTGGTCCCGG 62.426 72.222 0.00 0.00 36.69 5.73
7480 10786 4.295199 GGCCCTTTGGTCCCGGTT 62.295 66.667 0.00 0.00 0.00 4.44
7481 10787 2.989253 GCCCTTTGGTCCCGGTTG 60.989 66.667 0.00 0.00 0.00 3.77
7482 10788 2.282887 CCCTTTGGTCCCGGTTGG 60.283 66.667 0.00 0.00 0.00 3.77
7483 10789 2.518933 CCTTTGGTCCCGGTTGGT 59.481 61.111 0.00 0.00 34.77 3.67
7484 10790 1.901464 CCTTTGGTCCCGGTTGGTG 60.901 63.158 0.00 0.00 34.77 4.17
7485 10791 1.901464 CTTTGGTCCCGGTTGGTGG 60.901 63.158 0.00 0.00 34.77 4.61
7486 10792 4.589675 TTGGTCCCGGTTGGTGGC 62.590 66.667 0.00 0.00 34.77 5.01
7501 10807 4.589675 GGCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
7502 10808 2.282887 GCACCAACCGGGACCAAT 60.283 61.111 6.32 0.00 41.15 3.16
7503 10809 1.001887 GCACCAACCGGGACCAATA 60.002 57.895 6.32 0.00 41.15 1.90
7504 10810 1.029947 GCACCAACCGGGACCAATAG 61.030 60.000 6.32 0.00 41.15 1.73
7505 10811 0.393808 CACCAACCGGGACCAATAGG 60.394 60.000 6.32 0.00 41.15 2.57
7506 10812 1.453197 CCAACCGGGACCAATAGGC 60.453 63.158 6.32 0.00 40.01 3.93
7507 10813 1.301623 CAACCGGGACCAATAGGCA 59.698 57.895 6.32 0.00 39.06 4.75
7508 10814 0.106719 CAACCGGGACCAATAGGCAT 60.107 55.000 6.32 0.00 39.06 4.40
7509 10815 0.182775 AACCGGGACCAATAGGCATC 59.817 55.000 6.32 0.00 39.06 3.91
7510 10816 1.073199 CCGGGACCAATAGGCATCC 59.927 63.158 0.00 0.00 39.06 3.51
7511 10817 1.705002 CCGGGACCAATAGGCATCCA 61.705 60.000 0.00 0.00 39.06 3.41
7512 10818 0.535102 CGGGACCAATAGGCATCCAC 60.535 60.000 0.00 0.00 39.06 4.02
7513 10819 0.535102 GGGACCAATAGGCATCCACG 60.535 60.000 0.00 0.00 39.06 4.94
7514 10820 1.166531 GGACCAATAGGCATCCACGC 61.167 60.000 0.00 0.00 39.06 5.34
7515 10821 1.498865 GACCAATAGGCATCCACGCG 61.499 60.000 3.53 3.53 39.06 6.01
7516 10822 1.523711 CCAATAGGCATCCACGCGT 60.524 57.895 5.58 5.58 0.00 6.01
7517 10823 1.498865 CCAATAGGCATCCACGCGTC 61.499 60.000 9.86 0.00 0.00 5.19
7518 10824 0.809636 CAATAGGCATCCACGCGTCA 60.810 55.000 9.86 0.00 0.00 4.35
7519 10825 0.530650 AATAGGCATCCACGCGTCAG 60.531 55.000 9.86 3.57 0.00 3.51
7520 10826 2.978452 ATAGGCATCCACGCGTCAGC 62.978 60.000 9.86 11.14 40.74 4.26
7522 10828 3.197790 GCATCCACGCGTCAGCAT 61.198 61.111 9.86 0.00 45.49 3.79
7523 10829 3.009140 CATCCACGCGTCAGCATC 58.991 61.111 9.86 0.00 45.49 3.91
7524 10830 1.520120 CATCCACGCGTCAGCATCT 60.520 57.895 9.86 0.00 45.49 2.90
7525 10831 1.227089 ATCCACGCGTCAGCATCTC 60.227 57.895 9.86 0.00 45.49 2.75
7526 10832 1.948721 ATCCACGCGTCAGCATCTCA 61.949 55.000 9.86 0.00 45.49 3.27
7527 10833 2.163390 CCACGCGTCAGCATCTCAG 61.163 63.158 9.86 0.00 45.49 3.35
7528 10834 2.163390 CACGCGTCAGCATCTCAGG 61.163 63.158 9.86 0.00 45.49 3.86
7529 10835 2.182791 CGCGTCAGCATCTCAGGT 59.817 61.111 0.00 0.00 45.49 4.00
7530 10836 2.163390 CGCGTCAGCATCTCAGGTG 61.163 63.158 0.00 0.00 45.49 4.00
7531 10837 2.459442 GCGTCAGCATCTCAGGTGC 61.459 63.158 0.00 0.00 44.35 5.01
7536 10842 2.124403 GCATCTCAGGTGCTGGGG 60.124 66.667 1.34 0.00 39.45 4.96
7537 10843 2.976490 GCATCTCAGGTGCTGGGGT 61.976 63.158 1.34 0.00 39.45 4.95
7538 10844 1.687612 CATCTCAGGTGCTGGGGTT 59.312 57.895 0.00 0.00 31.91 4.11
7539 10845 0.038744 CATCTCAGGTGCTGGGGTTT 59.961 55.000 0.00 0.00 31.91 3.27
7540 10846 0.779997 ATCTCAGGTGCTGGGGTTTT 59.220 50.000 0.00 0.00 31.91 2.43
7541 10847 0.555769 TCTCAGGTGCTGGGGTTTTT 59.444 50.000 0.00 0.00 31.91 1.94
7542 10848 0.675633 CTCAGGTGCTGGGGTTTTTG 59.324 55.000 0.00 0.00 31.51 2.44
7543 10849 0.032615 TCAGGTGCTGGGGTTTTTGT 60.033 50.000 0.00 0.00 31.51 2.83
7544 10850 0.829990 CAGGTGCTGGGGTTTTTGTT 59.170 50.000 0.00 0.00 0.00 2.83
7545 10851 1.209261 CAGGTGCTGGGGTTTTTGTTT 59.791 47.619 0.00 0.00 0.00 2.83
7546 10852 1.912731 AGGTGCTGGGGTTTTTGTTTT 59.087 42.857 0.00 0.00 0.00 2.43
7547 10853 2.307392 AGGTGCTGGGGTTTTTGTTTTT 59.693 40.909 0.00 0.00 0.00 1.94
7871 11177 5.395682 GGGGGTGTTAATTTAGGTGTTTC 57.604 43.478 0.00 0.00 0.00 2.78
7872 11178 4.833938 GGGGGTGTTAATTTAGGTGTTTCA 59.166 41.667 0.00 0.00 0.00 2.69
7873 11179 5.482526 GGGGGTGTTAATTTAGGTGTTTCAT 59.517 40.000 0.00 0.00 0.00 2.57
7874 11180 6.664384 GGGGGTGTTAATTTAGGTGTTTCATA 59.336 38.462 0.00 0.00 0.00 2.15
7875 11181 7.343574 GGGGGTGTTAATTTAGGTGTTTCATAT 59.656 37.037 0.00 0.00 0.00 1.78
7876 11182 9.411189 GGGGTGTTAATTTAGGTGTTTCATATA 57.589 33.333 0.00 0.00 0.00 0.86
7887 11193 9.899661 TTAGGTGTTTCATATATTGTGTTAGCT 57.100 29.630 0.00 0.00 0.00 3.32
7889 11195 9.547753 AGGTGTTTCATATATTGTGTTAGCTAG 57.452 33.333 0.00 0.00 0.00 3.42
7890 11196 8.283291 GGTGTTTCATATATTGTGTTAGCTAGC 58.717 37.037 6.62 6.62 0.00 3.42
7891 11197 9.046296 GTGTTTCATATATTGTGTTAGCTAGCT 57.954 33.333 23.12 23.12 0.00 3.32
7910 11216 9.362151 AGCTAGCTAATTAATAGAGAGAAGTGT 57.638 33.333 17.69 0.00 33.04 3.55
7911 11217 9.620660 GCTAGCTAATTAATAGAGAGAAGTGTC 57.379 37.037 7.70 0.00 33.04 3.67
7913 11219 8.776061 AGCTAATTAATAGAGAGAAGTGTCCT 57.224 34.615 0.00 0.00 33.04 3.85
7914 11220 8.856103 AGCTAATTAATAGAGAGAAGTGTCCTC 58.144 37.037 0.00 0.00 33.04 3.71
7915 11221 8.856103 GCTAATTAATAGAGAGAAGTGTCCTCT 58.144 37.037 0.00 0.00 43.16 3.69
7925 11231 5.588648 AGAGAAGTGTCCTCTCTTATCTTCG 59.411 44.000 0.00 0.00 40.46 3.79
7926 11232 5.258051 AGAAGTGTCCTCTCTTATCTTCGT 58.742 41.667 0.00 0.00 36.14 3.85
7927 11233 4.974368 AGTGTCCTCTCTTATCTTCGTG 57.026 45.455 0.00 0.00 0.00 4.35
7928 11234 3.129638 AGTGTCCTCTCTTATCTTCGTGC 59.870 47.826 0.00 0.00 0.00 5.34
7929 11235 3.129638 GTGTCCTCTCTTATCTTCGTGCT 59.870 47.826 0.00 0.00 0.00 4.40
7930 11236 3.764434 TGTCCTCTCTTATCTTCGTGCTT 59.236 43.478 0.00 0.00 0.00 3.91
7931 11237 4.109050 GTCCTCTCTTATCTTCGTGCTTG 58.891 47.826 0.00 0.00 0.00 4.01
7932 11238 3.131223 TCCTCTCTTATCTTCGTGCTTGG 59.869 47.826 0.00 0.00 0.00 3.61
7933 11239 3.118956 CCTCTCTTATCTTCGTGCTTGGT 60.119 47.826 0.00 0.00 0.00 3.67
7934 11240 4.109050 CTCTCTTATCTTCGTGCTTGGTC 58.891 47.826 0.00 0.00 0.00 4.02
7935 11241 2.854777 CTCTTATCTTCGTGCTTGGTCG 59.145 50.000 0.00 0.00 0.00 4.79
7936 11242 2.490509 TCTTATCTTCGTGCTTGGTCGA 59.509 45.455 0.00 0.00 0.00 4.20
7937 11243 3.130516 TCTTATCTTCGTGCTTGGTCGAT 59.869 43.478 0.00 0.00 36.01 3.59
7938 11244 1.645034 ATCTTCGTGCTTGGTCGATG 58.355 50.000 0.00 0.00 36.01 3.84
7939 11245 1.014044 TCTTCGTGCTTGGTCGATGC 61.014 55.000 0.00 0.00 36.01 3.91
7940 11246 1.005037 TTCGTGCTTGGTCGATGCT 60.005 52.632 0.00 0.00 36.01 3.79
7941 11247 0.245266 TTCGTGCTTGGTCGATGCTA 59.755 50.000 0.00 0.00 36.01 3.49
7942 11248 0.459899 TCGTGCTTGGTCGATGCTAT 59.540 50.000 0.00 0.00 0.00 2.97
7943 11249 0.578683 CGTGCTTGGTCGATGCTATG 59.421 55.000 0.00 0.00 0.00 2.23
7944 11250 1.656652 GTGCTTGGTCGATGCTATGT 58.343 50.000 0.00 0.00 0.00 2.29
7945 11251 2.798145 CGTGCTTGGTCGATGCTATGTA 60.798 50.000 0.00 0.00 0.00 2.29
7946 11252 2.540101 GTGCTTGGTCGATGCTATGTAC 59.460 50.000 0.00 0.00 0.00 2.90
7947 11253 2.430694 TGCTTGGTCGATGCTATGTACT 59.569 45.455 0.00 0.00 0.00 2.73
7948 11254 3.634910 TGCTTGGTCGATGCTATGTACTA 59.365 43.478 0.00 0.00 0.00 1.82
7949 11255 4.280929 TGCTTGGTCGATGCTATGTACTAT 59.719 41.667 0.00 0.00 0.00 2.12
7950 11256 5.475564 TGCTTGGTCGATGCTATGTACTATA 59.524 40.000 0.00 0.00 0.00 1.31
7951 11257 6.030849 GCTTGGTCGATGCTATGTACTATAG 58.969 44.000 0.00 0.00 0.00 1.31
7952 11258 6.349445 GCTTGGTCGATGCTATGTACTATAGT 60.349 42.308 10.87 10.87 0.00 2.12
7953 11259 7.148289 GCTTGGTCGATGCTATGTACTATAGTA 60.148 40.741 8.59 8.59 0.00 1.82
7954 11260 8.803397 TTGGTCGATGCTATGTACTATAGTAT 57.197 34.615 15.53 4.75 32.54 2.12
7955 11261 9.895138 TTGGTCGATGCTATGTACTATAGTATA 57.105 33.333 15.53 13.33 32.54 1.47
7956 11262 9.543783 TGGTCGATGCTATGTACTATAGTATAG 57.456 37.037 15.53 14.98 32.54 1.31
7957 11263 9.761504 GGTCGATGCTATGTACTATAGTATAGA 57.238 37.037 21.59 13.12 30.63 1.98
7971 11277 8.742777 ACTATAGTATAGAGAGGACTAGACACG 58.257 40.741 21.59 0.00 37.14 4.49
7972 11278 4.634199 AGTATAGAGAGGACTAGACACGC 58.366 47.826 0.00 0.00 37.14 5.34
7973 11279 3.849563 ATAGAGAGGACTAGACACGCT 57.150 47.619 0.00 0.00 0.00 5.07
7974 11280 4.959560 ATAGAGAGGACTAGACACGCTA 57.040 45.455 0.00 1.02 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 3.457234 TGCCATGCTAGTGATTTACTCG 58.543 45.455 0.00 0.00 40.89 4.18
60 61 6.035650 GCTTAGTACGTGCATGTTTAGATCAA 59.964 38.462 18.34 0.00 0.00 2.57
189 190 3.300765 GCTGCTGCCACCAAAGCT 61.301 61.111 3.85 0.00 40.21 3.74
263 267 0.744414 CATCACCATGTCCACCGACC 60.744 60.000 0.00 0.00 38.32 4.79
429 433 1.145377 ACCGTCGTTCCTTTGCTGT 59.855 52.632 0.00 0.00 0.00 4.40
452 456 4.147449 TAGCTGGCTCACGCGCAT 62.147 61.111 5.73 0.00 36.88 4.73
464 468 0.831307 GTGTCCCCTAACCCTAGCTG 59.169 60.000 0.00 0.00 0.00 4.24
465 469 0.326332 GGTGTCCCCTAACCCTAGCT 60.326 60.000 0.00 0.00 0.00 3.32
466 470 1.683418 CGGTGTCCCCTAACCCTAGC 61.683 65.000 0.00 0.00 32.44 3.42
467 471 1.683418 GCGGTGTCCCCTAACCCTAG 61.683 65.000 0.00 0.00 32.44 3.02
468 472 1.686800 GCGGTGTCCCCTAACCCTA 60.687 63.158 0.00 0.00 32.44 3.53
469 473 3.007323 GCGGTGTCCCCTAACCCT 61.007 66.667 0.00 0.00 32.44 4.34
471 475 2.046604 GTGCGGTGTCCCCTAACC 60.047 66.667 0.00 0.00 0.00 2.85
472 476 1.670083 GTGTGCGGTGTCCCCTAAC 60.670 63.158 0.00 0.00 0.00 2.34
473 477 1.412453 AAGTGTGCGGTGTCCCCTAA 61.412 55.000 0.00 0.00 0.00 2.69
475 479 1.198759 ATAAGTGTGCGGTGTCCCCT 61.199 55.000 0.00 0.00 0.00 4.79
476 480 0.538118 TATAAGTGTGCGGTGTCCCC 59.462 55.000 0.00 0.00 0.00 4.81
477 481 2.614829 ATATAAGTGTGCGGTGTCCC 57.385 50.000 0.00 0.00 0.00 4.46
478 482 4.296690 GTCTATATAAGTGTGCGGTGTCC 58.703 47.826 0.00 0.00 0.00 4.02
479 483 3.973135 CGTCTATATAAGTGTGCGGTGTC 59.027 47.826 0.00 0.00 0.00 3.67
480 484 3.794475 GCGTCTATATAAGTGTGCGGTGT 60.794 47.826 0.00 0.00 0.00 4.16
481 485 2.724690 GCGTCTATATAAGTGTGCGGTG 59.275 50.000 0.00 0.00 0.00 4.94
482 486 2.359848 TGCGTCTATATAAGTGTGCGGT 59.640 45.455 0.00 0.00 0.00 5.68
483 487 2.980476 CTGCGTCTATATAAGTGTGCGG 59.020 50.000 0.00 0.00 0.00 5.69
484 488 2.405357 GCTGCGTCTATATAAGTGTGCG 59.595 50.000 0.00 0.00 0.00 5.34
485 489 2.731976 GGCTGCGTCTATATAAGTGTGC 59.268 50.000 0.00 0.00 0.00 4.57
486 490 2.980476 CGGCTGCGTCTATATAAGTGTG 59.020 50.000 0.00 0.00 0.00 3.82
487 491 2.607282 GCGGCTGCGTCTATATAAGTGT 60.607 50.000 0.00 0.00 0.00 3.55
488 492 1.986378 GCGGCTGCGTCTATATAAGTG 59.014 52.381 0.00 0.00 0.00 3.16
489 493 2.349297 GCGGCTGCGTCTATATAAGT 57.651 50.000 0.00 0.00 0.00 2.24
548 552 4.882396 GAGAAGAGGCCCTCGCGC 62.882 72.222 4.80 0.00 35.36 6.86
549 553 2.621371 GAAGAGAAGAGGCCCTCGCG 62.621 65.000 4.80 0.00 35.36 5.87
550 554 1.142965 GAAGAGAAGAGGCCCTCGC 59.857 63.158 4.80 1.57 35.36 5.03
551 555 0.744281 GAGAAGAGAAGAGGCCCTCG 59.256 60.000 4.80 0.00 35.36 4.63
552 556 1.859302 TGAGAAGAGAAGAGGCCCTC 58.141 55.000 1.26 1.26 0.00 4.30
553 557 2.304470 GTTTGAGAAGAGAAGAGGCCCT 59.696 50.000 0.00 0.00 0.00 5.19
554 558 2.304470 AGTTTGAGAAGAGAAGAGGCCC 59.696 50.000 0.00 0.00 0.00 5.80
555 559 3.595173 GAGTTTGAGAAGAGAAGAGGCC 58.405 50.000 0.00 0.00 0.00 5.19
556 560 3.007398 TGGAGTTTGAGAAGAGAAGAGGC 59.993 47.826 0.00 0.00 0.00 4.70
557 561 4.881019 TGGAGTTTGAGAAGAGAAGAGG 57.119 45.455 0.00 0.00 0.00 3.69
558 562 6.534793 GCTATTGGAGTTTGAGAAGAGAAGAG 59.465 42.308 0.00 0.00 0.00 2.85
559 563 6.014242 TGCTATTGGAGTTTGAGAAGAGAAGA 60.014 38.462 0.00 0.00 0.00 2.87
560 564 6.169094 TGCTATTGGAGTTTGAGAAGAGAAG 58.831 40.000 0.00 0.00 0.00 2.85
561 565 6.114187 TGCTATTGGAGTTTGAGAAGAGAA 57.886 37.500 0.00 0.00 0.00 2.87
562 566 5.745312 TGCTATTGGAGTTTGAGAAGAGA 57.255 39.130 0.00 0.00 0.00 3.10
563 567 5.879223 ACATGCTATTGGAGTTTGAGAAGAG 59.121 40.000 0.00 0.00 0.00 2.85
564 568 5.809001 ACATGCTATTGGAGTTTGAGAAGA 58.191 37.500 0.00 0.00 0.00 2.87
565 569 7.044181 TCTACATGCTATTGGAGTTTGAGAAG 58.956 38.462 0.00 0.00 0.00 2.85
566 570 6.946340 TCTACATGCTATTGGAGTTTGAGAA 58.054 36.000 0.00 0.00 0.00 2.87
567 571 6.544928 TCTACATGCTATTGGAGTTTGAGA 57.455 37.500 0.00 0.00 0.00 3.27
568 572 7.044181 TCTTCTACATGCTATTGGAGTTTGAG 58.956 38.462 0.00 0.00 0.00 3.02
569 573 6.946340 TCTTCTACATGCTATTGGAGTTTGA 58.054 36.000 0.00 0.00 0.00 2.69
570 574 6.238320 GCTCTTCTACATGCTATTGGAGTTTG 60.238 42.308 0.00 0.00 0.00 2.93
571 575 5.819901 GCTCTTCTACATGCTATTGGAGTTT 59.180 40.000 0.00 0.00 0.00 2.66
572 576 5.363939 GCTCTTCTACATGCTATTGGAGTT 58.636 41.667 0.00 0.00 0.00 3.01
573 577 4.202305 GGCTCTTCTACATGCTATTGGAGT 60.202 45.833 0.00 0.00 0.00 3.85
574 578 4.202295 TGGCTCTTCTACATGCTATTGGAG 60.202 45.833 0.00 0.00 0.00 3.86
575 579 3.711190 TGGCTCTTCTACATGCTATTGGA 59.289 43.478 0.00 0.00 0.00 3.53
576 580 4.077300 TGGCTCTTCTACATGCTATTGG 57.923 45.455 0.00 0.00 0.00 3.16
577 581 4.694509 GGATGGCTCTTCTACATGCTATTG 59.305 45.833 0.00 0.00 31.34 1.90
578 582 4.596643 AGGATGGCTCTTCTACATGCTATT 59.403 41.667 0.00 0.00 40.73 1.73
579 583 4.166539 AGGATGGCTCTTCTACATGCTAT 58.833 43.478 0.00 0.00 40.73 2.97
580 584 3.581101 AGGATGGCTCTTCTACATGCTA 58.419 45.455 0.00 0.00 40.73 3.49
581 585 2.406559 AGGATGGCTCTTCTACATGCT 58.593 47.619 0.00 0.00 38.27 3.79
582 586 2.926778 AGGATGGCTCTTCTACATGC 57.073 50.000 0.00 0.00 33.77 4.06
583 587 7.389053 GGTTTATAAGGATGGCTCTTCTACATG 59.611 40.741 0.00 0.00 0.00 3.21
584 588 7.072454 TGGTTTATAAGGATGGCTCTTCTACAT 59.928 37.037 0.00 0.00 0.00 2.29
585 589 6.385759 TGGTTTATAAGGATGGCTCTTCTACA 59.614 38.462 0.00 0.00 0.00 2.74
586 590 6.706716 GTGGTTTATAAGGATGGCTCTTCTAC 59.293 42.308 0.00 0.00 0.00 2.59
587 591 6.615726 AGTGGTTTATAAGGATGGCTCTTCTA 59.384 38.462 0.00 0.00 0.00 2.10
588 592 5.430089 AGTGGTTTATAAGGATGGCTCTTCT 59.570 40.000 0.00 0.00 0.00 2.85
589 593 5.685728 AGTGGTTTATAAGGATGGCTCTTC 58.314 41.667 0.00 0.00 0.00 2.87
590 594 5.398012 GGAGTGGTTTATAAGGATGGCTCTT 60.398 44.000 0.00 0.00 0.00 2.85
591 595 4.103311 GGAGTGGTTTATAAGGATGGCTCT 59.897 45.833 0.00 0.00 0.00 4.09
592 596 4.141482 TGGAGTGGTTTATAAGGATGGCTC 60.141 45.833 0.00 0.00 0.00 4.70
593 597 3.785887 TGGAGTGGTTTATAAGGATGGCT 59.214 43.478 0.00 0.00 0.00 4.75
594 598 4.164843 TGGAGTGGTTTATAAGGATGGC 57.835 45.455 0.00 0.00 0.00 4.40
595 599 5.755849 AGTTGGAGTGGTTTATAAGGATGG 58.244 41.667 0.00 0.00 0.00 3.51
596 600 7.148069 GGAAAGTTGGAGTGGTTTATAAGGATG 60.148 40.741 0.00 0.00 0.00 3.51
597 601 6.890268 GGAAAGTTGGAGTGGTTTATAAGGAT 59.110 38.462 0.00 0.00 0.00 3.24
598 602 6.045106 AGGAAAGTTGGAGTGGTTTATAAGGA 59.955 38.462 0.00 0.00 0.00 3.36
599 603 6.246163 AGGAAAGTTGGAGTGGTTTATAAGG 58.754 40.000 0.00 0.00 0.00 2.69
600 604 7.094334 GGAAGGAAAGTTGGAGTGGTTTATAAG 60.094 40.741 0.00 0.00 0.00 1.73
601 605 6.717997 GGAAGGAAAGTTGGAGTGGTTTATAA 59.282 38.462 0.00 0.00 0.00 0.98
602 606 6.183361 TGGAAGGAAAGTTGGAGTGGTTTATA 60.183 38.462 0.00 0.00 0.00 0.98
603 607 5.077564 GGAAGGAAAGTTGGAGTGGTTTAT 58.922 41.667 0.00 0.00 0.00 1.40
604 608 4.079672 TGGAAGGAAAGTTGGAGTGGTTTA 60.080 41.667 0.00 0.00 0.00 2.01
605 609 3.296854 GGAAGGAAAGTTGGAGTGGTTT 58.703 45.455 0.00 0.00 0.00 3.27
606 610 2.243736 TGGAAGGAAAGTTGGAGTGGTT 59.756 45.455 0.00 0.00 0.00 3.67
607 611 1.850345 TGGAAGGAAAGTTGGAGTGGT 59.150 47.619 0.00 0.00 0.00 4.16
608 612 2.158608 AGTGGAAGGAAAGTTGGAGTGG 60.159 50.000 0.00 0.00 0.00 4.00
609 613 3.214696 AGTGGAAGGAAAGTTGGAGTG 57.785 47.619 0.00 0.00 0.00 3.51
610 614 3.244596 GCTAGTGGAAGGAAAGTTGGAGT 60.245 47.826 0.00 0.00 0.00 3.85
611 615 3.244561 TGCTAGTGGAAGGAAAGTTGGAG 60.245 47.826 0.00 0.00 0.00 3.86
612 616 2.708861 TGCTAGTGGAAGGAAAGTTGGA 59.291 45.455 0.00 0.00 0.00 3.53
613 617 3.140325 TGCTAGTGGAAGGAAAGTTGG 57.860 47.619 0.00 0.00 0.00 3.77
614 618 3.441572 CCATGCTAGTGGAAGGAAAGTTG 59.558 47.826 0.00 0.00 42.02 3.16
615 619 3.074538 ACCATGCTAGTGGAAGGAAAGTT 59.925 43.478 6.39 0.00 42.02 2.66
616 620 2.644798 ACCATGCTAGTGGAAGGAAAGT 59.355 45.455 6.39 0.00 42.02 2.66
617 621 3.012518 CACCATGCTAGTGGAAGGAAAG 58.987 50.000 6.39 0.00 42.02 2.62
618 622 3.071874 CACCATGCTAGTGGAAGGAAA 57.928 47.619 6.39 0.00 42.02 3.13
619 623 2.787473 CACCATGCTAGTGGAAGGAA 57.213 50.000 6.39 0.00 42.02 3.36
626 630 3.055094 AGTTTAGTCCCACCATGCTAGTG 60.055 47.826 0.00 0.00 34.91 2.74
627 631 3.182152 AGTTTAGTCCCACCATGCTAGT 58.818 45.455 0.00 0.00 0.00 2.57
628 632 3.914426 AGTTTAGTCCCACCATGCTAG 57.086 47.619 0.00 0.00 0.00 3.42
629 633 3.054655 GGAAGTTTAGTCCCACCATGCTA 60.055 47.826 0.00 0.00 0.00 3.49
630 634 2.290960 GGAAGTTTAGTCCCACCATGCT 60.291 50.000 0.00 0.00 0.00 3.79
631 635 2.092323 GGAAGTTTAGTCCCACCATGC 58.908 52.381 0.00 0.00 0.00 4.06
639 643 1.703513 AGGTGGTGGGAAGTTTAGTCC 59.296 52.381 0.00 0.00 0.00 3.85
640 644 3.146847 CAAGGTGGTGGGAAGTTTAGTC 58.853 50.000 0.00 0.00 0.00 2.59
641 645 2.512476 ACAAGGTGGTGGGAAGTTTAGT 59.488 45.455 0.00 0.00 0.00 2.24
642 646 3.146847 GACAAGGTGGTGGGAAGTTTAG 58.853 50.000 0.00 0.00 0.00 1.85
643 647 2.510382 TGACAAGGTGGTGGGAAGTTTA 59.490 45.455 0.00 0.00 0.00 2.01
644 648 1.286553 TGACAAGGTGGTGGGAAGTTT 59.713 47.619 0.00 0.00 0.00 2.66
645 649 0.923358 TGACAAGGTGGTGGGAAGTT 59.077 50.000 0.00 0.00 0.00 2.66
646 650 1.149101 ATGACAAGGTGGTGGGAAGT 58.851 50.000 0.00 0.00 0.00 3.01
647 651 1.538047 CATGACAAGGTGGTGGGAAG 58.462 55.000 0.00 0.00 0.00 3.46
648 652 0.539438 GCATGACAAGGTGGTGGGAA 60.539 55.000 0.00 0.00 0.00 3.97
649 653 1.074775 GCATGACAAGGTGGTGGGA 59.925 57.895 0.00 0.00 0.00 4.37
650 654 1.978617 GGCATGACAAGGTGGTGGG 60.979 63.158 0.00 0.00 0.00 4.61
651 655 1.228521 TGGCATGACAAGGTGGTGG 60.229 57.895 0.00 0.00 0.00 4.61
652 656 1.526575 GGTGGCATGACAAGGTGGTG 61.527 60.000 0.58 0.00 0.00 4.17
653 657 1.228552 GGTGGCATGACAAGGTGGT 60.229 57.895 0.58 0.00 0.00 4.16
654 658 0.327924 TAGGTGGCATGACAAGGTGG 59.672 55.000 0.58 0.00 0.00 4.61
655 659 1.271325 TGTAGGTGGCATGACAAGGTG 60.271 52.381 0.58 0.00 0.00 4.00
656 660 1.064003 TGTAGGTGGCATGACAAGGT 58.936 50.000 0.58 0.00 0.00 3.50
657 661 2.019249 CATGTAGGTGGCATGACAAGG 58.981 52.381 0.58 0.00 44.60 3.61
658 662 2.941064 CTCATGTAGGTGGCATGACAAG 59.059 50.000 0.58 0.00 45.18 3.16
659 663 2.940971 GCTCATGTAGGTGGCATGACAA 60.941 50.000 0.58 0.00 45.18 3.18
660 664 1.407299 GCTCATGTAGGTGGCATGACA 60.407 52.381 0.00 0.00 45.18 3.58
661 665 1.303309 GCTCATGTAGGTGGCATGAC 58.697 55.000 0.00 0.00 45.18 3.06
663 667 0.820891 GGGCTCATGTAGGTGGCATG 60.821 60.000 0.00 0.00 43.55 4.06
664 668 0.990282 AGGGCTCATGTAGGTGGCAT 60.990 55.000 0.00 0.00 0.00 4.40
665 669 1.207488 AAGGGCTCATGTAGGTGGCA 61.207 55.000 0.00 0.00 0.00 4.92
666 670 0.837272 TAAGGGCTCATGTAGGTGGC 59.163 55.000 0.00 0.00 0.00 5.01
667 671 2.366916 CTCTAAGGGCTCATGTAGGTGG 59.633 54.545 0.00 0.00 0.00 4.61
668 672 3.300388 TCTCTAAGGGCTCATGTAGGTG 58.700 50.000 0.00 0.00 0.00 4.00
669 673 3.689872 TCTCTAAGGGCTCATGTAGGT 57.310 47.619 0.00 0.00 0.00 3.08
670 674 4.155709 TGATCTCTAAGGGCTCATGTAGG 58.844 47.826 0.00 0.00 0.00 3.18
671 675 5.798125 TTGATCTCTAAGGGCTCATGTAG 57.202 43.478 0.00 0.00 0.00 2.74
672 676 6.556495 AGATTTGATCTCTAAGGGCTCATGTA 59.444 38.462 0.00 0.00 33.42 2.29
673 677 5.369110 AGATTTGATCTCTAAGGGCTCATGT 59.631 40.000 0.00 0.00 33.42 3.21
674 678 5.701750 CAGATTTGATCTCTAAGGGCTCATG 59.298 44.000 0.00 0.00 37.58 3.07
675 679 5.605908 TCAGATTTGATCTCTAAGGGCTCAT 59.394 40.000 0.00 0.00 37.58 2.90
676 680 4.964897 TCAGATTTGATCTCTAAGGGCTCA 59.035 41.667 0.00 0.00 37.58 4.26
677 681 5.543507 TCAGATTTGATCTCTAAGGGCTC 57.456 43.478 0.00 0.00 37.58 4.70
678 682 5.965033 TTCAGATTTGATCTCTAAGGGCT 57.035 39.130 0.00 0.00 37.58 5.19
679 683 7.067981 ACAATTTCAGATTTGATCTCTAAGGGC 59.932 37.037 0.00 0.00 37.58 5.19
680 684 8.517062 ACAATTTCAGATTTGATCTCTAAGGG 57.483 34.615 0.00 0.00 37.58 3.95
681 685 9.170734 TGACAATTTCAGATTTGATCTCTAAGG 57.829 33.333 0.00 0.00 37.58 2.69
686 690 9.894783 CCATATGACAATTTCAGATTTGATCTC 57.105 33.333 3.65 0.00 33.67 2.75
687 691 8.857098 CCCATATGACAATTTCAGATTTGATCT 58.143 33.333 3.65 0.00 33.67 2.75
688 692 7.597743 GCCCATATGACAATTTCAGATTTGATC 59.402 37.037 3.65 0.00 33.67 2.92
689 693 7.289317 AGCCCATATGACAATTTCAGATTTGAT 59.711 33.333 3.65 0.00 33.67 2.57
690 694 6.608405 AGCCCATATGACAATTTCAGATTTGA 59.392 34.615 3.65 0.00 33.67 2.69
691 695 6.812998 AGCCCATATGACAATTTCAGATTTG 58.187 36.000 3.65 0.00 33.67 2.32
692 696 6.837568 AGAGCCCATATGACAATTTCAGATTT 59.162 34.615 3.65 0.00 33.67 2.17
693 697 6.371278 AGAGCCCATATGACAATTTCAGATT 58.629 36.000 3.65 0.00 33.67 2.40
694 698 5.950023 AGAGCCCATATGACAATTTCAGAT 58.050 37.500 3.65 0.00 36.55 2.90
695 699 5.378230 AGAGCCCATATGACAATTTCAGA 57.622 39.130 3.65 0.00 37.77 3.27
696 700 5.704515 CCTAGAGCCCATATGACAATTTCAG 59.295 44.000 3.65 0.00 37.77 3.02
697 701 5.624159 CCTAGAGCCCATATGACAATTTCA 58.376 41.667 3.65 0.00 39.11 2.69
698 702 4.457257 GCCTAGAGCCCATATGACAATTTC 59.543 45.833 3.65 0.00 34.35 2.17
699 703 4.401925 GCCTAGAGCCCATATGACAATTT 58.598 43.478 3.65 0.00 34.35 1.82
700 704 4.026356 GCCTAGAGCCCATATGACAATT 57.974 45.455 3.65 0.00 34.35 2.32
701 705 3.710209 GCCTAGAGCCCATATGACAAT 57.290 47.619 3.65 0.00 34.35 2.71
713 717 1.055040 ATGTGAGATGGGCCTAGAGC 58.945 55.000 4.53 0.00 42.60 4.09
714 718 3.135348 TGAAATGTGAGATGGGCCTAGAG 59.865 47.826 4.53 0.00 0.00 2.43
715 719 3.114606 TGAAATGTGAGATGGGCCTAGA 58.885 45.455 4.53 0.00 0.00 2.43
716 720 3.565764 TGAAATGTGAGATGGGCCTAG 57.434 47.619 4.53 0.00 0.00 3.02
717 721 3.010027 TGTTGAAATGTGAGATGGGCCTA 59.990 43.478 4.53 0.00 0.00 3.93
718 722 2.225091 TGTTGAAATGTGAGATGGGCCT 60.225 45.455 4.53 0.00 0.00 5.19
719 723 2.165030 CTGTTGAAATGTGAGATGGGCC 59.835 50.000 0.00 0.00 0.00 5.80
720 724 3.084039 TCTGTTGAAATGTGAGATGGGC 58.916 45.455 0.00 0.00 0.00 5.36
721 725 4.074259 TGTCTGTTGAAATGTGAGATGGG 58.926 43.478 0.00 0.00 0.00 4.00
722 726 5.892160 ATGTCTGTTGAAATGTGAGATGG 57.108 39.130 0.00 0.00 0.00 3.51
723 727 7.809665 TGTAATGTCTGTTGAAATGTGAGATG 58.190 34.615 0.00 0.00 0.00 2.90
724 728 7.984422 TGTAATGTCTGTTGAAATGTGAGAT 57.016 32.000 0.00 0.00 0.00 2.75
725 729 7.281999 TGTTGTAATGTCTGTTGAAATGTGAGA 59.718 33.333 0.00 0.00 0.00 3.27
726 730 7.416817 TGTTGTAATGTCTGTTGAAATGTGAG 58.583 34.615 0.00 0.00 0.00 3.51
727 731 7.326968 TGTTGTAATGTCTGTTGAAATGTGA 57.673 32.000 0.00 0.00 0.00 3.58
728 732 7.167968 CCTTGTTGTAATGTCTGTTGAAATGTG 59.832 37.037 0.00 0.00 0.00 3.21
729 733 7.202526 CCTTGTTGTAATGTCTGTTGAAATGT 58.797 34.615 0.00 0.00 0.00 2.71
730 734 6.642131 CCCTTGTTGTAATGTCTGTTGAAATG 59.358 38.462 0.00 0.00 0.00 2.32
731 735 6.549364 TCCCTTGTTGTAATGTCTGTTGAAAT 59.451 34.615 0.00 0.00 0.00 2.17
732 736 5.888724 TCCCTTGTTGTAATGTCTGTTGAAA 59.111 36.000 0.00 0.00 0.00 2.69
733 737 5.441500 TCCCTTGTTGTAATGTCTGTTGAA 58.558 37.500 0.00 0.00 0.00 2.69
734 738 5.042463 TCCCTTGTTGTAATGTCTGTTGA 57.958 39.130 0.00 0.00 0.00 3.18
735 739 5.530915 TCTTCCCTTGTTGTAATGTCTGTTG 59.469 40.000 0.00 0.00 0.00 3.33
736 740 5.690865 TCTTCCCTTGTTGTAATGTCTGTT 58.309 37.500 0.00 0.00 0.00 3.16
737 741 5.304686 TCTTCCCTTGTTGTAATGTCTGT 57.695 39.130 0.00 0.00 0.00 3.41
738 742 6.039270 TGTTTCTTCCCTTGTTGTAATGTCTG 59.961 38.462 0.00 0.00 0.00 3.51
739 743 6.126409 TGTTTCTTCCCTTGTTGTAATGTCT 58.874 36.000 0.00 0.00 0.00 3.41
740 744 6.385649 TGTTTCTTCCCTTGTTGTAATGTC 57.614 37.500 0.00 0.00 0.00 3.06
741 745 6.682861 GCTTGTTTCTTCCCTTGTTGTAATGT 60.683 38.462 0.00 0.00 0.00 2.71
742 746 5.691754 GCTTGTTTCTTCCCTTGTTGTAATG 59.308 40.000 0.00 0.00 0.00 1.90
743 747 5.507315 CGCTTGTTTCTTCCCTTGTTGTAAT 60.507 40.000 0.00 0.00 0.00 1.89
744 748 4.201970 CGCTTGTTTCTTCCCTTGTTGTAA 60.202 41.667 0.00 0.00 0.00 2.41
745 749 3.314080 CGCTTGTTTCTTCCCTTGTTGTA 59.686 43.478 0.00 0.00 0.00 2.41
746 750 2.099098 CGCTTGTTTCTTCCCTTGTTGT 59.901 45.455 0.00 0.00 0.00 3.32
747 751 2.543653 CCGCTTGTTTCTTCCCTTGTTG 60.544 50.000 0.00 0.00 0.00 3.33
748 752 1.681264 CCGCTTGTTTCTTCCCTTGTT 59.319 47.619 0.00 0.00 0.00 2.83
749 753 1.133915 TCCGCTTGTTTCTTCCCTTGT 60.134 47.619 0.00 0.00 0.00 3.16
750 754 1.604604 TCCGCTTGTTTCTTCCCTTG 58.395 50.000 0.00 0.00 0.00 3.61
751 755 2.437413 GATCCGCTTGTTTCTTCCCTT 58.563 47.619 0.00 0.00 0.00 3.95
752 756 1.676014 CGATCCGCTTGTTTCTTCCCT 60.676 52.381 0.00 0.00 0.00 4.20
753 757 0.727398 CGATCCGCTTGTTTCTTCCC 59.273 55.000 0.00 0.00 0.00 3.97
754 758 1.439679 ACGATCCGCTTGTTTCTTCC 58.560 50.000 0.00 0.00 0.00 3.46
755 759 3.061139 CGATACGATCCGCTTGTTTCTTC 60.061 47.826 0.00 0.00 0.00 2.87
756 760 2.858344 CGATACGATCCGCTTGTTTCTT 59.142 45.455 0.00 0.00 0.00 2.52
757 761 2.098607 TCGATACGATCCGCTTGTTTCT 59.901 45.455 0.00 0.00 0.00 2.52
758 762 2.456989 TCGATACGATCCGCTTGTTTC 58.543 47.619 0.00 0.00 0.00 2.78
759 763 2.460918 CTCGATACGATCCGCTTGTTT 58.539 47.619 0.00 0.00 34.61 2.83
760 764 1.864435 GCTCGATACGATCCGCTTGTT 60.864 52.381 0.00 0.00 34.61 2.83
761 765 0.317938 GCTCGATACGATCCGCTTGT 60.318 55.000 0.00 0.00 34.61 3.16
762 766 0.317854 TGCTCGATACGATCCGCTTG 60.318 55.000 0.00 0.00 34.61 4.01
763 767 0.039978 CTGCTCGATACGATCCGCTT 60.040 55.000 0.00 0.00 34.61 4.68
764 768 1.576920 CTGCTCGATACGATCCGCT 59.423 57.895 0.00 0.00 34.61 5.52
765 769 2.083522 GCTGCTCGATACGATCCGC 61.084 63.158 0.00 0.00 34.61 5.54
766 770 0.796927 TAGCTGCTCGATACGATCCG 59.203 55.000 4.91 0.00 34.61 4.18
767 771 1.466697 GCTAGCTGCTCGATACGATCC 60.467 57.143 4.91 0.00 38.95 3.36
768 772 1.889891 GCTAGCTGCTCGATACGATC 58.110 55.000 4.91 0.00 38.95 3.69
779 783 1.134848 AGCTTGACACTAGCTAGCTGC 60.135 52.381 27.68 18.28 46.66 5.25
780 784 2.957491 AGCTTGACACTAGCTAGCTG 57.043 50.000 27.68 18.34 46.66 4.24
784 788 9.309224 TGGATATTATTAGCTTGACACTAGCTA 57.691 33.333 4.98 4.98 46.66 3.32
790 794 9.929180 TGAGTATGGATATTATTAGCTTGACAC 57.071 33.333 0.00 0.00 0.00 3.67
791 795 9.929180 GTGAGTATGGATATTATTAGCTTGACA 57.071 33.333 0.00 0.00 0.00 3.58
792 796 9.372369 GGTGAGTATGGATATTATTAGCTTGAC 57.628 37.037 0.00 0.00 0.00 3.18
793 797 9.100197 TGGTGAGTATGGATATTATTAGCTTGA 57.900 33.333 0.00 0.00 0.00 3.02
794 798 9.725019 TTGGTGAGTATGGATATTATTAGCTTG 57.275 33.333 0.00 0.00 0.00 4.01
842 846 4.016444 ACTTGTCAAAAGTCAAAGCCAGA 58.984 39.130 0.00 0.00 0.00 3.86
885 896 4.333649 TGCAAATTATAGTCACTCTGCAGC 59.666 41.667 9.47 0.00 33.87 5.25
887 898 5.234972 CGATGCAAATTATAGTCACTCTGCA 59.765 40.000 0.00 0.00 42.22 4.41
890 901 4.752101 GGCGATGCAAATTATAGTCACTCT 59.248 41.667 0.00 0.00 0.00 3.24
891 902 4.511454 TGGCGATGCAAATTATAGTCACTC 59.489 41.667 0.00 0.00 0.00 3.51
894 905 3.250762 GCTGGCGATGCAAATTATAGTCA 59.749 43.478 0.00 0.00 0.00 3.41
976 1007 0.249784 GCTAGGTTAAGGGCTACGGC 60.250 60.000 0.00 0.00 37.82 5.68
1019 1050 0.736672 GAAGCCCGAGAAGACGAACC 60.737 60.000 0.00 0.00 35.09 3.62
1081 1112 2.438434 GGTCTGGGCCAACATCCG 60.438 66.667 8.04 0.00 0.00 4.18
1082 1113 1.678970 GTGGTCTGGGCCAACATCC 60.679 63.158 8.04 8.27 40.68 3.51
1083 1114 2.040544 CGTGGTCTGGGCCAACATC 61.041 63.158 8.04 0.00 40.68 3.06
5129 5176 0.979665 TTTGAGAGTCTCCTGGCCAG 59.020 55.000 26.87 26.87 0.00 4.85
5183 5230 0.744414 CGTGCCATTGGAGGATTCGT 60.744 55.000 6.95 0.00 0.00 3.85
5184 5231 1.439353 CCGTGCCATTGGAGGATTCG 61.439 60.000 6.95 1.35 0.00 3.34
5187 5234 2.124151 GCCGTGCCATTGGAGGAT 60.124 61.111 6.95 0.00 0.00 3.24
5208 5264 3.553511 CGAATGAGACGGAGAAGGATTTG 59.446 47.826 0.00 0.00 0.00 2.32
5379 5435 2.910479 ACGGTGTCCAGCTCGACA 60.910 61.111 10.36 10.36 40.44 4.35
5433 5489 1.652124 CTGTTGACGTTAATCCCGACG 59.348 52.381 0.00 0.00 44.34 5.12
5442 5498 0.308684 AGACGACGCTGTTGACGTTA 59.691 50.000 0.00 0.00 45.24 3.18
5589 5645 2.040544 GCCCAACGGAGACATGGTG 61.041 63.158 0.00 0.00 35.68 4.17
5676 5732 2.413765 GAGCCGAAGCCGAGGTAG 59.586 66.667 0.00 0.00 41.25 3.18
5718 5774 0.902531 TCCAGCCAAGTAGGTAGTGC 59.097 55.000 0.00 0.00 40.61 4.40
5725 5781 1.830477 AGAGAAGCTCCAGCCAAGTAG 59.170 52.381 0.00 0.00 43.38 2.57
5796 5852 2.852075 TTGGGGCCAAGACGAGGT 60.852 61.111 4.39 0.00 0.00 3.85
5943 5999 2.203788 TGAGGCCCGAACTCCACT 60.204 61.111 0.00 0.00 34.06 4.00
6216 6272 1.470979 GGCATGTAGTCGTACACCAGG 60.471 57.143 0.00 0.00 42.06 4.45
6282 6338 2.253452 GGCTGCAGCTTGTTGTCG 59.747 61.111 35.82 0.00 41.70 4.35
6345 6404 3.368427 CGTGAAGGTAGAGCAATCCAGAA 60.368 47.826 0.00 0.00 0.00 3.02
6489 6548 4.969196 ACGTGCGTGCTCTGTGGG 62.969 66.667 0.00 0.00 0.00 4.61
6636 6695 0.871722 TGGGATGTTTTTCTCGTGCG 59.128 50.000 0.00 0.00 0.00 5.34
6684 6743 3.012518 GTTGAGGAGTGATCCATTGTGG 58.987 50.000 0.00 0.00 39.43 4.17
6703 6762 5.191727 TGGAGTTCAATATCCACCATGTT 57.808 39.130 0.00 0.00 40.70 2.71
6744 6803 0.460811 TGAGTGCTAAGCATGCCTCG 60.461 55.000 15.66 3.53 41.91 4.63
6845 6904 3.133542 TGATGATAGCTCTGGTGTTGGAG 59.866 47.826 0.00 0.00 0.00 3.86
6846 6905 3.106827 TGATGATAGCTCTGGTGTTGGA 58.893 45.455 0.00 0.00 0.00 3.53
6847 6906 3.201290 GTGATGATAGCTCTGGTGTTGG 58.799 50.000 0.00 0.00 0.00 3.77
6894 6953 1.603678 CCTTCGTTTTGCATTGCAGCT 60.604 47.619 11.76 0.00 40.61 4.24
6928 10219 5.453903 CCGTGGAAGAAGGATAAGACATGAT 60.454 44.000 0.00 0.00 0.00 2.45
7022 10321 4.024725 CCTGATCTTACCGTCTTACGAGAG 60.025 50.000 0.15 0.00 46.05 3.20
7027 10326 2.364647 CCCCCTGATCTTACCGTCTTAC 59.635 54.545 0.00 0.00 0.00 2.34
7028 10327 2.674420 CCCCCTGATCTTACCGTCTTA 58.326 52.381 0.00 0.00 0.00 2.10
7029 10328 1.497161 CCCCCTGATCTTACCGTCTT 58.503 55.000 0.00 0.00 0.00 3.01
7030 10329 1.049289 GCCCCCTGATCTTACCGTCT 61.049 60.000 0.00 0.00 0.00 4.18
7031 10330 1.049289 AGCCCCCTGATCTTACCGTC 61.049 60.000 0.00 0.00 0.00 4.79
7032 10331 0.620700 AAGCCCCCTGATCTTACCGT 60.621 55.000 0.00 0.00 0.00 4.83
7033 10332 0.106894 GAAGCCCCCTGATCTTACCG 59.893 60.000 0.00 0.00 0.00 4.02
7034 10333 1.418264 GAGAAGCCCCCTGATCTTACC 59.582 57.143 0.00 0.00 0.00 2.85
7166 10468 0.961753 GGGCAACACCTCCTTGAAAG 59.038 55.000 0.00 0.00 39.10 2.62
7220 10526 4.079253 ACAAGCCTTGGGTGTTACAATAG 58.921 43.478 9.64 0.00 34.12 1.73
7269 10575 7.809331 GGATACATTAATGTCGTTACATACCGA 59.191 37.037 24.00 2.97 45.79 4.69
7310 10616 5.303971 CCTCATGAATCAGGACAATAGGTC 58.696 45.833 0.00 0.00 46.20 3.85
7311 10617 4.103785 CCCTCATGAATCAGGACAATAGGT 59.896 45.833 0.00 0.00 30.32 3.08
7312 10618 4.649692 CCCTCATGAATCAGGACAATAGG 58.350 47.826 0.00 0.00 30.32 2.57
7313 10619 4.070716 GCCCTCATGAATCAGGACAATAG 58.929 47.826 0.00 0.00 30.32 1.73
7314 10620 3.181440 GGCCCTCATGAATCAGGACAATA 60.181 47.826 0.00 0.00 30.32 1.90
7315 10621 2.423947 GGCCCTCATGAATCAGGACAAT 60.424 50.000 0.00 0.00 30.32 2.71
7316 10622 1.064463 GGCCCTCATGAATCAGGACAA 60.064 52.381 0.00 0.00 30.32 3.18
7317 10623 0.548031 GGCCCTCATGAATCAGGACA 59.452 55.000 0.00 0.00 30.32 4.02
7318 10624 0.548031 TGGCCCTCATGAATCAGGAC 59.452 55.000 0.00 0.00 30.32 3.85
7319 10625 1.526315 ATGGCCCTCATGAATCAGGA 58.474 50.000 0.00 0.00 34.22 3.86
7320 10626 2.364324 CAAATGGCCCTCATGAATCAGG 59.636 50.000 0.00 0.00 35.99 3.86
7321 10627 3.028850 ACAAATGGCCCTCATGAATCAG 58.971 45.455 0.00 0.00 35.99 2.90
7322 10628 3.025978 GACAAATGGCCCTCATGAATCA 58.974 45.455 0.00 0.00 35.99 2.57
7323 10629 2.363359 GGACAAATGGCCCTCATGAATC 59.637 50.000 0.00 0.00 37.19 2.52
7324 10630 2.391678 GGACAAATGGCCCTCATGAAT 58.608 47.619 0.00 0.00 37.19 2.57
7325 10631 1.851304 GGACAAATGGCCCTCATGAA 58.149 50.000 0.00 0.00 37.19 2.57
7326 10632 3.594453 GGACAAATGGCCCTCATGA 57.406 52.632 0.00 0.00 37.19 3.07
7333 10639 0.394938 AAAAACCGGGACAAATGGCC 59.605 50.000 6.32 0.00 44.61 5.36
7334 10640 1.069358 TCAAAAACCGGGACAAATGGC 59.931 47.619 6.32 0.00 0.00 4.40
7335 10641 3.460857 TTCAAAAACCGGGACAAATGG 57.539 42.857 6.32 0.00 0.00 3.16
7336 10642 3.672867 CGATTCAAAAACCGGGACAAATG 59.327 43.478 6.32 0.00 0.00 2.32
7337 10643 3.305744 CCGATTCAAAAACCGGGACAAAT 60.306 43.478 6.32 0.00 38.42 2.32
7338 10644 2.034812 CCGATTCAAAAACCGGGACAAA 59.965 45.455 6.32 0.00 38.42 2.83
7339 10645 1.609555 CCGATTCAAAAACCGGGACAA 59.390 47.619 6.32 0.00 38.42 3.18
7340 10646 1.240256 CCGATTCAAAAACCGGGACA 58.760 50.000 6.32 0.00 38.42 4.02
7344 10650 1.530323 AGTCCCGATTCAAAAACCGG 58.470 50.000 0.00 0.00 41.47 5.28
7345 10651 4.214758 ACTTTAGTCCCGATTCAAAAACCG 59.785 41.667 0.00 0.00 0.00 4.44
7346 10652 5.009310 ACACTTTAGTCCCGATTCAAAAACC 59.991 40.000 0.00 0.00 0.00 3.27
7347 10653 6.068473 ACACTTTAGTCCCGATTCAAAAAC 57.932 37.500 0.00 0.00 0.00 2.43
7348 10654 5.049954 CGACACTTTAGTCCCGATTCAAAAA 60.050 40.000 0.00 0.00 35.07 1.94
7349 10655 4.449743 CGACACTTTAGTCCCGATTCAAAA 59.550 41.667 0.00 0.00 35.07 2.44
7350 10656 3.991773 CGACACTTTAGTCCCGATTCAAA 59.008 43.478 0.00 0.00 35.07 2.69
7351 10657 3.581755 CGACACTTTAGTCCCGATTCAA 58.418 45.455 0.00 0.00 35.07 2.69
7352 10658 2.094390 CCGACACTTTAGTCCCGATTCA 60.094 50.000 0.00 0.00 35.07 2.57
7353 10659 2.094338 ACCGACACTTTAGTCCCGATTC 60.094 50.000 0.00 0.00 35.07 2.52
7354 10660 1.897802 ACCGACACTTTAGTCCCGATT 59.102 47.619 0.00 0.00 35.07 3.34
7355 10661 1.553706 ACCGACACTTTAGTCCCGAT 58.446 50.000 0.00 0.00 35.07 4.18
7356 10662 1.812571 GTACCGACACTTTAGTCCCGA 59.187 52.381 0.00 0.00 35.07 5.14
7357 10663 1.815003 AGTACCGACACTTTAGTCCCG 59.185 52.381 0.00 0.00 35.07 5.14
7358 10664 5.346522 CATTAGTACCGACACTTTAGTCCC 58.653 45.833 0.00 0.00 35.07 4.46
7359 10665 4.802563 GCATTAGTACCGACACTTTAGTCC 59.197 45.833 0.00 0.00 35.07 3.85
7360 10666 4.802563 GGCATTAGTACCGACACTTTAGTC 59.197 45.833 0.00 0.00 35.19 2.59
7361 10667 4.382362 GGGCATTAGTACCGACACTTTAGT 60.382 45.833 0.00 0.00 0.00 2.24
7362 10668 4.117685 GGGCATTAGTACCGACACTTTAG 58.882 47.826 0.00 0.00 0.00 1.85
7363 10669 3.770933 AGGGCATTAGTACCGACACTTTA 59.229 43.478 0.00 0.00 0.00 1.85
7364 10670 2.570302 AGGGCATTAGTACCGACACTTT 59.430 45.455 0.00 0.00 0.00 2.66
7365 10671 2.185387 AGGGCATTAGTACCGACACTT 58.815 47.619 0.00 0.00 0.00 3.16
7366 10672 1.861982 AGGGCATTAGTACCGACACT 58.138 50.000 0.00 0.00 0.00 3.55
7367 10673 3.806625 TTAGGGCATTAGTACCGACAC 57.193 47.619 0.00 0.00 0.00 3.67
7368 10674 3.118665 GGTTTAGGGCATTAGTACCGACA 60.119 47.826 0.00 0.00 0.00 4.35
7369 10675 3.133542 AGGTTTAGGGCATTAGTACCGAC 59.866 47.826 0.00 0.00 0.00 4.79
7370 10676 3.377573 AGGTTTAGGGCATTAGTACCGA 58.622 45.455 0.00 0.00 0.00 4.69
7371 10677 3.832615 AGGTTTAGGGCATTAGTACCG 57.167 47.619 0.00 0.00 0.00 4.02
7372 10678 6.656902 ACTAAAGGTTTAGGGCATTAGTACC 58.343 40.000 12.90 0.00 43.38 3.34
7373 10679 8.571461 AAACTAAAGGTTTAGGGCATTAGTAC 57.429 34.615 12.90 0.00 45.20 2.73
7374 10680 7.550196 CGAAACTAAAGGTTTAGGGCATTAGTA 59.450 37.037 12.90 0.00 46.77 1.82
7375 10681 6.373495 CGAAACTAAAGGTTTAGGGCATTAGT 59.627 38.462 12.90 0.00 46.77 2.24
7376 10682 6.782150 CGAAACTAAAGGTTTAGGGCATTAG 58.218 40.000 12.90 0.00 46.77 1.73
7377 10683 6.746745 CGAAACTAAAGGTTTAGGGCATTA 57.253 37.500 12.90 0.00 46.77 1.90
7378 10684 5.638596 CGAAACTAAAGGTTTAGGGCATT 57.361 39.130 12.90 4.02 46.77 3.56
7388 10694 3.547746 TGCAAGAACCGAAACTAAAGGT 58.452 40.909 0.00 0.00 40.50 3.50
7389 10695 4.766404 ATGCAAGAACCGAAACTAAAGG 57.234 40.909 0.00 0.00 0.00 3.11
7390 10696 6.581166 GGTTTATGCAAGAACCGAAACTAAAG 59.419 38.462 16.03 0.00 36.31 1.85
7391 10697 6.440436 GGTTTATGCAAGAACCGAAACTAAA 58.560 36.000 16.03 0.00 36.31 1.85
7392 10698 6.004408 GGTTTATGCAAGAACCGAAACTAA 57.996 37.500 16.03 0.00 36.31 2.24
7393 10699 5.616488 GGTTTATGCAAGAACCGAAACTA 57.384 39.130 16.03 0.00 36.31 2.24
7394 10700 4.499037 GGTTTATGCAAGAACCGAAACT 57.501 40.909 16.03 0.00 36.31 2.66
7400 10706 1.471287 GTCCCGGTTTATGCAAGAACC 59.529 52.381 19.41 19.41 41.47 3.62
7401 10707 2.156098 TGTCCCGGTTTATGCAAGAAC 58.844 47.619 0.00 0.00 0.00 3.01
7402 10708 2.570415 TGTCCCGGTTTATGCAAGAA 57.430 45.000 0.00 0.00 0.00 2.52
7403 10709 2.570415 TTGTCCCGGTTTATGCAAGA 57.430 45.000 0.00 0.00 0.00 3.02
7404 10710 3.510719 CATTTGTCCCGGTTTATGCAAG 58.489 45.455 0.00 0.00 0.00 4.01
7405 10711 2.232452 CCATTTGTCCCGGTTTATGCAA 59.768 45.455 0.00 0.00 0.00 4.08
7406 10712 1.821753 CCATTTGTCCCGGTTTATGCA 59.178 47.619 0.00 0.00 0.00 3.96
7407 10713 1.136110 CCCATTTGTCCCGGTTTATGC 59.864 52.381 0.00 0.00 0.00 3.14
7408 10714 1.136110 GCCCATTTGTCCCGGTTTATG 59.864 52.381 0.00 0.00 0.00 1.90
7409 10715 1.480789 GCCCATTTGTCCCGGTTTAT 58.519 50.000 0.00 0.00 0.00 1.40
7410 10716 0.612453 GGCCCATTTGTCCCGGTTTA 60.612 55.000 0.00 0.00 0.00 2.01
7411 10717 1.911269 GGCCCATTTGTCCCGGTTT 60.911 57.895 0.00 0.00 0.00 3.27
7412 10718 2.283604 GGCCCATTTGTCCCGGTT 60.284 61.111 0.00 0.00 0.00 4.44
7413 10719 2.781431 GAAGGCCCATTTGTCCCGGT 62.781 60.000 0.00 0.00 0.00 5.28
7414 10720 2.037208 AAGGCCCATTTGTCCCGG 59.963 61.111 0.00 0.00 0.00 5.73
7415 10721 1.304052 TGAAGGCCCATTTGTCCCG 60.304 57.895 0.00 0.00 0.00 5.14
7416 10722 1.595093 CGTGAAGGCCCATTTGTCCC 61.595 60.000 0.00 0.00 0.00 4.46
7417 10723 0.893727 ACGTGAAGGCCCATTTGTCC 60.894 55.000 0.00 0.00 0.00 4.02
7418 10724 0.240945 CACGTGAAGGCCCATTTGTC 59.759 55.000 10.90 0.00 0.00 3.18
7419 10725 1.178534 CCACGTGAAGGCCCATTTGT 61.179 55.000 19.30 0.00 0.00 2.83
7420 10726 1.586028 CCACGTGAAGGCCCATTTG 59.414 57.895 19.30 0.00 0.00 2.32
7421 10727 2.275380 GCCACGTGAAGGCCCATTT 61.275 57.895 19.30 0.00 46.50 2.32
7422 10728 2.676471 GCCACGTGAAGGCCCATT 60.676 61.111 19.30 0.00 46.50 3.16
7456 10762 2.941583 ACCAAAGGGCCTCCTCCC 60.942 66.667 6.46 0.00 44.07 4.30
7457 10763 2.677848 GACCAAAGGGCCTCCTCC 59.322 66.667 6.46 0.00 44.07 4.30
7464 10770 2.989253 CAACCGGGACCAAAGGGC 60.989 66.667 6.32 0.00 37.90 5.19
7465 10771 2.282887 CCAACCGGGACCAAAGGG 60.283 66.667 6.32 0.00 40.01 3.95
7466 10772 1.901464 CACCAACCGGGACCAAAGG 60.901 63.158 6.32 0.00 41.15 3.11
7467 10773 1.901464 CCACCAACCGGGACCAAAG 60.901 63.158 6.32 0.00 41.15 2.77
7468 10774 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
7469 10775 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
7484 10790 2.487274 TATTGGTCCCGGTTGGTGCC 62.487 60.000 0.00 0.00 34.77 5.01
7485 10791 1.001887 TATTGGTCCCGGTTGGTGC 60.002 57.895 0.00 0.00 34.77 5.01
7486 10792 0.393808 CCTATTGGTCCCGGTTGGTG 60.394 60.000 0.00 0.00 34.77 4.17
7487 10793 1.996086 CCTATTGGTCCCGGTTGGT 59.004 57.895 0.00 0.00 34.77 3.67
7488 10794 1.453197 GCCTATTGGTCCCGGTTGG 60.453 63.158 0.00 0.00 35.27 3.77
7489 10795 0.106719 ATGCCTATTGGTCCCGGTTG 60.107 55.000 0.00 0.00 35.27 3.77
7490 10796 0.182775 GATGCCTATTGGTCCCGGTT 59.817 55.000 0.00 0.00 35.27 4.44
7491 10797 1.705997 GGATGCCTATTGGTCCCGGT 61.706 60.000 0.00 0.00 35.27 5.28
7492 10798 1.073199 GGATGCCTATTGGTCCCGG 59.927 63.158 0.00 0.00 35.27 5.73
7493 10799 0.535102 GTGGATGCCTATTGGTCCCG 60.535 60.000 1.28 0.00 35.27 5.14
7494 10800 0.535102 CGTGGATGCCTATTGGTCCC 60.535 60.000 1.28 0.00 35.27 4.46
7495 10801 1.166531 GCGTGGATGCCTATTGGTCC 61.167 60.000 0.00 0.00 35.27 4.46
7496 10802 1.498865 CGCGTGGATGCCTATTGGTC 61.499 60.000 0.00 0.00 35.27 4.02
7497 10803 1.523711 CGCGTGGATGCCTATTGGT 60.524 57.895 0.00 0.00 35.27 3.67
7498 10804 1.498865 GACGCGTGGATGCCTATTGG 61.499 60.000 20.70 0.00 0.00 3.16
7499 10805 0.809636 TGACGCGTGGATGCCTATTG 60.810 55.000 20.70 0.00 0.00 1.90
7500 10806 0.530650 CTGACGCGTGGATGCCTATT 60.531 55.000 20.70 0.00 0.00 1.73
7501 10807 1.068083 CTGACGCGTGGATGCCTAT 59.932 57.895 20.70 0.00 0.00 2.57
7502 10808 2.494445 CTGACGCGTGGATGCCTA 59.506 61.111 20.70 0.00 0.00 3.93
7505 10811 3.160557 GATGCTGACGCGTGGATGC 62.161 63.158 20.70 15.70 39.65 3.91
7506 10812 1.485838 GAGATGCTGACGCGTGGATG 61.486 60.000 20.70 4.59 39.65 3.51
7507 10813 1.227089 GAGATGCTGACGCGTGGAT 60.227 57.895 20.70 10.50 39.65 3.41
7508 10814 2.181777 GAGATGCTGACGCGTGGA 59.818 61.111 20.70 4.37 39.65 4.02
7509 10815 2.125952 TGAGATGCTGACGCGTGG 60.126 61.111 20.70 10.85 39.65 4.94
7510 10816 2.163390 CCTGAGATGCTGACGCGTG 61.163 63.158 20.70 3.71 39.65 5.34
7511 10817 2.182791 CCTGAGATGCTGACGCGT 59.817 61.111 13.85 13.85 39.65 6.01
7512 10818 2.163390 CACCTGAGATGCTGACGCG 61.163 63.158 3.53 3.53 39.65 6.01
7513 10819 2.459442 GCACCTGAGATGCTGACGC 61.459 63.158 0.00 0.00 40.08 5.19
7514 10820 3.791539 GCACCTGAGATGCTGACG 58.208 61.111 0.00 0.00 40.08 4.35
7519 10825 2.124403 CCCCAGCACCTGAGATGC 60.124 66.667 0.00 0.00 43.74 3.91
7520 10826 0.038744 AAACCCCAGCACCTGAGATG 59.961 55.000 0.00 0.00 32.44 2.90
7521 10827 0.779997 AAAACCCCAGCACCTGAGAT 59.220 50.000 0.00 0.00 32.44 2.75
7522 10828 0.555769 AAAAACCCCAGCACCTGAGA 59.444 50.000 0.00 0.00 32.44 3.27
7523 10829 0.675633 CAAAAACCCCAGCACCTGAG 59.324 55.000 0.00 0.00 32.44 3.35
7524 10830 0.032615 ACAAAAACCCCAGCACCTGA 60.033 50.000 0.00 0.00 32.44 3.86
7525 10831 0.829990 AACAAAAACCCCAGCACCTG 59.170 50.000 0.00 0.00 0.00 4.00
7526 10832 1.578897 AAACAAAAACCCCAGCACCT 58.421 45.000 0.00 0.00 0.00 4.00
7527 10833 2.411628 AAAACAAAAACCCCAGCACC 57.588 45.000 0.00 0.00 0.00 5.01
7849 11155 4.833938 TGAAACACCTAAATTAACACCCCC 59.166 41.667 0.00 0.00 0.00 5.40
7850 11156 6.599356 ATGAAACACCTAAATTAACACCCC 57.401 37.500 0.00 0.00 0.00 4.95
7861 11167 9.899661 AGCTAACACAATATATGAAACACCTAA 57.100 29.630 0.00 0.00 0.00 2.69
7863 11169 9.547753 CTAGCTAACACAATATATGAAACACCT 57.452 33.333 0.00 0.00 0.00 4.00
7864 11170 8.283291 GCTAGCTAACACAATATATGAAACACC 58.717 37.037 7.70 0.00 0.00 4.16
7865 11171 9.046296 AGCTAGCTAACACAATATATGAAACAC 57.954 33.333 17.69 0.00 0.00 3.32
7884 11190 9.362151 ACACTTCTCTCTATTAATTAGCTAGCT 57.638 33.333 23.12 23.12 0.00 3.32
7885 11191 9.620660 GACACTTCTCTCTATTAATTAGCTAGC 57.379 37.037 6.62 6.62 0.00 3.42
7887 11193 9.869667 AGGACACTTCTCTCTATTAATTAGCTA 57.130 33.333 0.00 0.00 0.00 3.32
7888 11194 8.776061 AGGACACTTCTCTCTATTAATTAGCT 57.224 34.615 0.00 0.00 0.00 3.32
7889 11195 8.856103 AGAGGACACTTCTCTCTATTAATTAGC 58.144 37.037 0.00 0.00 36.99 3.09
7901 11207 5.588648 CGAAGATAAGAGAGGACACTTCTCT 59.411 44.000 7.43 7.43 43.56 3.10
7902 11208 5.355910 ACGAAGATAAGAGAGGACACTTCTC 59.644 44.000 0.00 0.00 32.84 2.87
7903 11209 5.124776 CACGAAGATAAGAGAGGACACTTCT 59.875 44.000 0.00 0.00 32.84 2.85
7904 11210 5.336744 CACGAAGATAAGAGAGGACACTTC 58.663 45.833 0.00 0.00 0.00 3.01
7905 11211 4.381079 GCACGAAGATAAGAGAGGACACTT 60.381 45.833 0.00 0.00 0.00 3.16
7906 11212 3.129638 GCACGAAGATAAGAGAGGACACT 59.870 47.826 0.00 0.00 0.00 3.55
7907 11213 3.129638 AGCACGAAGATAAGAGAGGACAC 59.870 47.826 0.00 0.00 0.00 3.67
7908 11214 3.357203 AGCACGAAGATAAGAGAGGACA 58.643 45.455 0.00 0.00 0.00 4.02
7909 11215 4.109050 CAAGCACGAAGATAAGAGAGGAC 58.891 47.826 0.00 0.00 0.00 3.85
7910 11216 3.131223 CCAAGCACGAAGATAAGAGAGGA 59.869 47.826 0.00 0.00 0.00 3.71
7911 11217 3.118956 ACCAAGCACGAAGATAAGAGAGG 60.119 47.826 0.00 0.00 0.00 3.69
7912 11218 4.109050 GACCAAGCACGAAGATAAGAGAG 58.891 47.826 0.00 0.00 0.00 3.20
7913 11219 3.427638 CGACCAAGCACGAAGATAAGAGA 60.428 47.826 0.00 0.00 0.00 3.10
7914 11220 2.854777 CGACCAAGCACGAAGATAAGAG 59.145 50.000 0.00 0.00 0.00 2.85
7915 11221 2.490509 TCGACCAAGCACGAAGATAAGA 59.509 45.455 0.00 0.00 35.62 2.10
7916 11222 2.876091 TCGACCAAGCACGAAGATAAG 58.124 47.619 0.00 0.00 35.62 1.73
7917 11223 3.186909 CATCGACCAAGCACGAAGATAA 58.813 45.455 0.00 0.00 41.65 1.75
7918 11224 2.809446 CATCGACCAAGCACGAAGATA 58.191 47.619 0.00 0.00 41.65 1.98
7919 11225 1.645034 CATCGACCAAGCACGAAGAT 58.355 50.000 0.00 0.00 41.65 2.40
7920 11226 1.014044 GCATCGACCAAGCACGAAGA 61.014 55.000 0.00 0.00 41.65 2.87
7921 11227 1.016130 AGCATCGACCAAGCACGAAG 61.016 55.000 0.00 0.00 41.65 3.79
7922 11228 0.245266 TAGCATCGACCAAGCACGAA 59.755 50.000 0.00 0.00 41.65 3.85
7923 11229 0.459899 ATAGCATCGACCAAGCACGA 59.540 50.000 0.00 0.00 42.49 4.35
7924 11230 0.578683 CATAGCATCGACCAAGCACG 59.421 55.000 0.00 0.00 0.00 5.34
7925 11231 1.656652 ACATAGCATCGACCAAGCAC 58.343 50.000 0.00 0.00 0.00 4.40
7926 11232 2.430694 AGTACATAGCATCGACCAAGCA 59.569 45.455 0.00 0.00 0.00 3.91
7927 11233 3.099267 AGTACATAGCATCGACCAAGC 57.901 47.619 0.00 0.00 0.00 4.01
7928 11234 7.147143 ACTATAGTACATAGCATCGACCAAG 57.853 40.000 2.75 0.00 0.00 3.61
7929 11235 8.803397 ATACTATAGTACATAGCATCGACCAA 57.197 34.615 14.82 0.00 32.72 3.67
7930 11236 9.543783 CTATACTATAGTACATAGCATCGACCA 57.456 37.037 14.82 0.00 32.72 4.02
7931 11237 9.761504 TCTATACTATAGTACATAGCATCGACC 57.238 37.037 14.82 0.00 32.72 4.79
7945 11251 8.742777 CGTGTCTAGTCCTCTCTATACTATAGT 58.257 40.741 10.87 10.87 0.00 2.12
7946 11252 7.703621 GCGTGTCTAGTCCTCTCTATACTATAG 59.296 44.444 0.00 0.00 0.00 1.31
7947 11253 7.396907 AGCGTGTCTAGTCCTCTCTATACTATA 59.603 40.741 0.00 0.00 0.00 1.31
7948 11254 6.211986 AGCGTGTCTAGTCCTCTCTATACTAT 59.788 42.308 0.00 0.00 0.00 2.12
7949 11255 5.539574 AGCGTGTCTAGTCCTCTCTATACTA 59.460 44.000 0.00 0.00 0.00 1.82
7950 11256 4.345837 AGCGTGTCTAGTCCTCTCTATACT 59.654 45.833 0.00 0.00 0.00 2.12
7951 11257 4.634199 AGCGTGTCTAGTCCTCTCTATAC 58.366 47.826 0.00 0.00 0.00 1.47
7952 11258 4.959560 AGCGTGTCTAGTCCTCTCTATA 57.040 45.455 0.00 0.00 0.00 1.31
7953 11259 3.849563 AGCGTGTCTAGTCCTCTCTAT 57.150 47.619 0.00 0.00 0.00 1.98
7954 11260 3.493002 GCTAGCGTGTCTAGTCCTCTCTA 60.493 52.174 0.00 0.00 45.22 2.43
7955 11261 2.743838 GCTAGCGTGTCTAGTCCTCTCT 60.744 54.545 0.00 0.00 45.22 3.10
7956 11262 1.600485 GCTAGCGTGTCTAGTCCTCTC 59.400 57.143 0.00 0.00 45.22 3.20
7957 11263 1.210967 AGCTAGCGTGTCTAGTCCTCT 59.789 52.381 9.55 0.00 45.22 3.69
7958 11264 1.670791 AGCTAGCGTGTCTAGTCCTC 58.329 55.000 9.55 0.00 45.22 3.71
7959 11265 2.171027 ACTAGCTAGCGTGTCTAGTCCT 59.829 50.000 20.91 0.00 45.22 3.85
7960 11266 2.563702 ACTAGCTAGCGTGTCTAGTCC 58.436 52.381 20.91 0.00 45.22 3.85
7961 11267 5.731599 TTAACTAGCTAGCGTGTCTAGTC 57.268 43.478 20.91 0.00 45.22 2.59
7962 11268 4.035441 GCTTAACTAGCTAGCGTGTCTAGT 59.965 45.833 20.91 8.38 46.77 2.57
7963 11269 4.529446 GCTTAACTAGCTAGCGTGTCTAG 58.471 47.826 20.91 7.71 46.77 2.43
7964 11270 4.548991 GCTTAACTAGCTAGCGTGTCTA 57.451 45.455 20.91 5.34 46.77 2.59
7965 11271 3.423996 GCTTAACTAGCTAGCGTGTCT 57.576 47.619 20.91 0.00 46.77 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.