Multiple sequence alignment - TraesCS2B01G148200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G148200 chr2B 100.000 4874 0 0 1 4874 114321815 114326688 0.000000e+00 9001.0
1 TraesCS2B01G148200 chr2B 88.941 642 55 11 2310 2949 787811701 787812328 0.000000e+00 778.0
2 TraesCS2B01G148200 chr2B 87.950 639 62 10 2312 2949 289174244 289173620 0.000000e+00 739.0
3 TraesCS2B01G148200 chr2B 81.847 639 100 10 4186 4814 722474234 722474866 1.550000e-144 523.0
4 TraesCS2B01G148200 chr2B 93.939 231 14 0 1 231 114068997 114069227 2.790000e-92 350.0
5 TraesCS2B01G148200 chr2B 96.947 131 4 0 2983 3113 677806507 677806377 2.280000e-53 220.0
6 TraesCS2B01G148200 chr2B 94.891 137 7 0 2978 3114 195691089 195691225 1.060000e-51 215.0
7 TraesCS2B01G148200 chr2B 86.740 181 16 1 2137 2317 144395402 144395574 1.380000e-45 195.0
8 TraesCS2B01G148200 chr2B 90.667 75 7 0 2067 2141 633391673 633391599 3.100000e-17 100.0
9 TraesCS2B01G148200 chr2D 92.126 2540 111 35 507 2986 74974352 74976862 0.000000e+00 3500.0
10 TraesCS2B01G148200 chr2D 92.095 1050 40 8 3109 4121 74976860 74977903 0.000000e+00 1439.0
11 TraesCS2B01G148200 chr2D 91.513 707 42 3 4186 4874 452373936 452373230 0.000000e+00 957.0
12 TraesCS2B01G148200 chr2D 90.537 708 48 9 4182 4874 619422544 619423247 0.000000e+00 918.0
13 TraesCS2B01G148200 chr2D 83.721 516 69 10 4186 4690 12528129 12527618 1.590000e-129 473.0
14 TraesCS2B01G148200 chr2D 84.364 275 35 6 232 500 74972190 74972462 3.740000e-66 263.0
15 TraesCS2B01G148200 chr2D 94.915 59 3 0 4106 4164 74978344 74978286 5.190000e-15 93.5
16 TraesCS2B01G148200 chr2A 92.229 978 37 7 3157 4102 74146545 74147515 0.000000e+00 1349.0
17 TraesCS2B01G148200 chr2A 93.148 861 33 6 1864 2698 74145379 74146239 0.000000e+00 1240.0
18 TraesCS2B01G148200 chr2A 89.451 910 40 19 934 1830 74144520 74145386 0.000000e+00 1098.0
19 TraesCS2B01G148200 chr2A 88.356 730 56 18 232 939 74142945 74143667 0.000000e+00 850.0
20 TraesCS2B01G148200 chr2A 78.492 716 76 49 3140 3831 348989999 348990660 9.830000e-107 398.0
21 TraesCS2B01G148200 chr2A 97.895 190 4 0 2696 2885 74146362 74146551 3.640000e-86 329.0
22 TraesCS2B01G148200 chr2A 92.593 54 4 0 4106 4159 74149718 74149665 1.450000e-10 78.7
23 TraesCS2B01G148200 chr1B 92.603 703 32 7 4186 4874 338013420 338012724 0.000000e+00 992.0
24 TraesCS2B01G148200 chr1B 80.780 692 111 14 4186 4859 7605706 7606393 5.590000e-144 521.0
25 TraesCS2B01G148200 chr1B 77.975 395 57 21 1120 1502 397670166 397669790 2.280000e-53 220.0
26 TraesCS2B01G148200 chr1B 84.699 183 20 1 2137 2319 495807089 495806915 5.010000e-40 176.0
27 TraesCS2B01G148200 chr1B 94.595 37 2 0 490 526 282126383 282126347 1.890000e-04 58.4
28 TraesCS2B01G148200 chr1B 100.000 29 0 0 502 530 282129532 282129504 2.000000e-03 54.7
29 TraesCS2B01G148200 chr3D 92.330 704 39 3 4186 4874 482860245 482860948 0.000000e+00 987.0
30 TraesCS2B01G148200 chr3D 88.821 653 47 11 2310 2949 304401525 304402164 0.000000e+00 778.0
31 TraesCS2B01G148200 chr3D 80.174 575 48 46 3284 3830 304402329 304402865 2.140000e-98 370.0
32 TraesCS2B01G148200 chr3D 88.217 314 31 2 3143 3456 406690692 406690999 2.140000e-98 370.0
33 TraesCS2B01G148200 chr3D 85.551 263 28 5 1805 2061 500225859 500225601 2.890000e-67 267.0
34 TraesCS2B01G148200 chr3D 88.372 172 11 2 2137 2307 500225602 500225439 1.070000e-46 198.0
35 TraesCS2B01G148200 chr3D 89.855 69 4 3 3580 3645 406691014 406691082 8.690000e-13 86.1
36 TraesCS2B01G148200 chr3D 100.000 29 0 0 502 530 254102172 254102144 2.000000e-03 54.7
37 TraesCS2B01G148200 chr5B 91.892 703 42 4 4186 4874 504925772 504926473 0.000000e+00 968.0
38 TraesCS2B01G148200 chr5B 93.878 147 7 2 2979 3125 661881769 661881913 2.280000e-53 220.0
39 TraesCS2B01G148200 chr5B 96.923 130 4 0 2983 3112 327750235 327750364 8.210000e-53 219.0
40 TraesCS2B01G148200 chr5B 91.304 46 1 2 497 539 700875818 700875863 5.270000e-05 60.2
41 TraesCS2B01G148200 chr6B 91.038 703 48 3 4186 4874 319558678 319559379 0.000000e+00 935.0
42 TraesCS2B01G148200 chr6B 96.212 132 5 0 2981 3112 39758400 39758531 2.950000e-52 217.0
43 TraesCS2B01G148200 chr6B 96.183 131 5 0 2983 3113 470915474 470915344 1.060000e-51 215.0
44 TraesCS2B01G148200 chr6B 92.683 41 2 1 490 530 677130933 677130894 1.890000e-04 58.4
45 TraesCS2B01G148200 chr6D 90.612 703 50 5 4186 4874 469591850 469591150 0.000000e+00 918.0
46 TraesCS2B01G148200 chr6D 96.212 132 5 0 2982 3113 52696632 52696763 2.950000e-52 217.0
47 TraesCS2B01G148200 chr1D 89.601 702 50 8 4186 4874 438256771 438256080 0.000000e+00 870.0
48 TraesCS2B01G148200 chr1D 95.175 228 11 0 4 231 45411054 45410827 1.290000e-95 361.0
49 TraesCS2B01G148200 chr1D 93.966 232 14 0 1 232 486285247 486285016 7.760000e-93 351.0
50 TraesCS2B01G148200 chr1D 94.298 228 13 0 4 231 45416603 45416376 2.790000e-92 350.0
51 TraesCS2B01G148200 chr1D 93.939 231 14 0 1 231 486290817 486290587 2.790000e-92 350.0
52 TraesCS2B01G148200 chr1D 76.904 394 67 19 1119 1506 296170933 296170558 8.270000e-48 202.0
53 TraesCS2B01G148200 chr1D 87.097 93 8 3 2056 2145 451978871 451978962 8.630000e-18 102.0
54 TraesCS2B01G148200 chr1A 88.445 701 67 7 4186 4874 577638630 577639328 0.000000e+00 833.0
55 TraesCS2B01G148200 chr1A 87.660 470 35 9 2493 2949 267347953 267348412 4.320000e-145 525.0
56 TraesCS2B01G148200 chr1A 87.447 470 37 9 2493 2949 272010410 272009950 5.590000e-144 521.0
57 TraesCS2B01G148200 chr1A 81.445 512 54 20 3140 3645 554812807 554813283 9.900000e-102 381.0
58 TraesCS2B01G148200 chr1A 91.503 153 13 0 2310 2462 554812622 554812774 1.370000e-50 211.0
59 TraesCS2B01G148200 chr1A 88.764 89 10 0 2055 2143 40897394 40897482 5.160000e-20 110.0
60 TraesCS2B01G148200 chr1A 87.059 85 11 0 2057 2141 201745718 201745634 4.020000e-16 97.1
61 TraesCS2B01G148200 chr7A 88.974 653 46 11 2310 2949 299533126 299533765 0.000000e+00 784.0
62 TraesCS2B01G148200 chr7A 80.139 574 54 44 3284 3830 299533921 299534461 1.660000e-99 374.0
63 TraesCS2B01G148200 chr7B 86.585 656 46 11 2310 2948 555322812 555323442 0.000000e+00 686.0
64 TraesCS2B01G148200 chr7B 78.522 717 65 51 3140 3831 272694866 272695518 5.920000e-104 388.0
65 TraesCS2B01G148200 chr7B 85.878 262 33 3 1800 2058 270096231 270096491 4.810000e-70 276.0
66 TraesCS2B01G148200 chr7B 94.891 137 6 1 2976 3112 450629747 450629612 3.820000e-51 213.0
67 TraesCS2B01G148200 chr7D 84.683 568 66 11 4187 4740 17513184 17513744 9.220000e-152 547.0
68 TraesCS2B01G148200 chr7D 94.298 228 13 0 4 231 460078378 460078151 2.790000e-92 350.0
69 TraesCS2B01G148200 chr7D 93.534 232 15 0 1 232 620310816 620311047 3.610000e-91 346.0
70 TraesCS2B01G148200 chr7D 79.282 362 52 16 1697 2058 561813419 561813757 1.060000e-56 231.0
71 TraesCS2B01G148200 chr7D 86.047 86 10 2 2057 2142 131304591 131304508 1.870000e-14 91.6
72 TraesCS2B01G148200 chr7D 83.333 90 15 0 2052 2141 566524742 566524831 3.130000e-12 84.2
73 TraesCS2B01G148200 chr4A 82.059 641 100 11 4186 4814 32473625 32474262 2.580000e-147 532.0
74 TraesCS2B01G148200 chr4A 78.652 712 76 49 3143 3831 290583468 290582810 2.110000e-108 403.0
75 TraesCS2B01G148200 chr4A 91.503 153 13 0 2310 2462 290583656 290583504 1.370000e-50 211.0
76 TraesCS2B01G148200 chr5A 86.596 470 42 7 2493 2949 186993160 186993621 2.620000e-137 499.0
77 TraesCS2B01G148200 chr5A 86.047 86 8 2 2057 2142 21446964 21446883 6.720000e-14 89.8
78 TraesCS2B01G148200 chr5D 85.010 487 53 13 4186 4657 356912701 356912220 1.230000e-130 477.0
79 TraesCS2B01G148200 chr5D 82.472 542 83 6 4186 4716 243876733 243877273 9.560000e-127 464.0
80 TraesCS2B01G148200 chr5D 95.238 231 10 1 1 231 527870403 527870632 9.970000e-97 364.0
81 TraesCS2B01G148200 chr6A 86.192 449 49 8 4182 4622 547596555 547596112 1.590000e-129 473.0
82 TraesCS2B01G148200 chr4D 93.939 231 14 0 1 231 468819613 468819843 2.790000e-92 350.0
83 TraesCS2B01G148200 chr4D 97.692 130 3 0 2983 3112 614656 614527 1.770000e-54 224.0
84 TraesCS2B01G148200 chr3B 81.471 367 54 9 1697 2058 18216698 18217055 6.170000e-74 289.0
85 TraesCS2B01G148200 chr3B 80.636 346 50 8 1720 2058 521511846 521512181 8.100000e-63 252.0
86 TraesCS2B01G148200 chr3B 100.000 29 0 0 502 530 305526795 305526767 2.000000e-03 54.7
87 TraesCS2B01G148200 chr3A 100.000 29 0 0 502 530 335478864 335478892 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G148200 chr2B 114321815 114326688 4873 False 9001.0 9001 100.000000 1 4874 1 chr2B.!!$F2 4873
1 TraesCS2B01G148200 chr2B 787811701 787812328 627 False 778.0 778 88.941000 2310 2949 1 chr2B.!!$F6 639
2 TraesCS2B01G148200 chr2B 289173620 289174244 624 True 739.0 739 87.950000 2312 2949 1 chr2B.!!$R1 637
3 TraesCS2B01G148200 chr2B 722474234 722474866 632 False 523.0 523 81.847000 4186 4814 1 chr2B.!!$F5 628
4 TraesCS2B01G148200 chr2D 74972190 74977903 5713 False 1734.0 3500 89.528333 232 4121 3 chr2D.!!$F2 3889
5 TraesCS2B01G148200 chr2D 452373230 452373936 706 True 957.0 957 91.513000 4186 4874 1 chr2D.!!$R3 688
6 TraesCS2B01G148200 chr2D 619422544 619423247 703 False 918.0 918 90.537000 4182 4874 1 chr2D.!!$F1 692
7 TraesCS2B01G148200 chr2D 12527618 12528129 511 True 473.0 473 83.721000 4186 4690 1 chr2D.!!$R1 504
8 TraesCS2B01G148200 chr2A 74142945 74147515 4570 False 973.2 1349 92.215800 232 4102 5 chr2A.!!$F2 3870
9 TraesCS2B01G148200 chr2A 348989999 348990660 661 False 398.0 398 78.492000 3140 3831 1 chr2A.!!$F1 691
10 TraesCS2B01G148200 chr1B 338012724 338013420 696 True 992.0 992 92.603000 4186 4874 1 chr1B.!!$R1 688
11 TraesCS2B01G148200 chr1B 7605706 7606393 687 False 521.0 521 80.780000 4186 4859 1 chr1B.!!$F1 673
12 TraesCS2B01G148200 chr3D 482860245 482860948 703 False 987.0 987 92.330000 4186 4874 1 chr3D.!!$F1 688
13 TraesCS2B01G148200 chr3D 304401525 304402865 1340 False 574.0 778 84.497500 2310 3830 2 chr3D.!!$F2 1520
14 TraesCS2B01G148200 chr5B 504925772 504926473 701 False 968.0 968 91.892000 4186 4874 1 chr5B.!!$F2 688
15 TraesCS2B01G148200 chr6B 319558678 319559379 701 False 935.0 935 91.038000 4186 4874 1 chr6B.!!$F2 688
16 TraesCS2B01G148200 chr6D 469591150 469591850 700 True 918.0 918 90.612000 4186 4874 1 chr6D.!!$R1 688
17 TraesCS2B01G148200 chr1D 438256080 438256771 691 True 870.0 870 89.601000 4186 4874 1 chr1D.!!$R4 688
18 TraesCS2B01G148200 chr1A 577638630 577639328 698 False 833.0 833 88.445000 4186 4874 1 chr1A.!!$F3 688
19 TraesCS2B01G148200 chr1A 554812622 554813283 661 False 296.0 381 86.474000 2310 3645 2 chr1A.!!$F4 1335
20 TraesCS2B01G148200 chr7A 299533126 299534461 1335 False 579.0 784 84.556500 2310 3830 2 chr7A.!!$F1 1520
21 TraesCS2B01G148200 chr7B 555322812 555323442 630 False 686.0 686 86.585000 2310 2948 1 chr7B.!!$F3 638
22 TraesCS2B01G148200 chr7B 272694866 272695518 652 False 388.0 388 78.522000 3140 3831 1 chr7B.!!$F2 691
23 TraesCS2B01G148200 chr7D 17513184 17513744 560 False 547.0 547 84.683000 4187 4740 1 chr7D.!!$F1 553
24 TraesCS2B01G148200 chr4A 32473625 32474262 637 False 532.0 532 82.059000 4186 4814 1 chr4A.!!$F1 628
25 TraesCS2B01G148200 chr4A 290582810 290583656 846 True 307.0 403 85.077500 2310 3831 2 chr4A.!!$R1 1521
26 TraesCS2B01G148200 chr5D 243876733 243877273 540 False 464.0 464 82.472000 4186 4716 1 chr5D.!!$F1 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
23 24 0.108329 CTGCTCCCATTCCGTACGTT 60.108 55.0 15.21 0.0 0.0 3.99 F
1050 3841 0.038526 GTAGTACGTGGCTGCAGTGT 60.039 55.0 16.64 11.4 0.0 3.55 F
2008 4820 0.261991 TGAAGTCTCCCCTCGGCTAT 59.738 55.0 0.00 0.0 0.0 2.97 F
2999 5998 0.178970 TATAGTGCTCCCTCCGTCCC 60.179 60.0 0.00 0.0 0.0 4.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1471 4277 0.041833 CCTTGGTCCTCTCCTCCTCA 59.958 60.0 0.0 0.0 0.00 3.86 R
2986 5985 0.323451 AATTTTGGGACGGAGGGAGC 60.323 55.0 0.0 0.0 0.00 4.70 R
3096 6095 0.106167 CTCATACTCCCTCCGTCCCA 60.106 60.0 0.0 0.0 0.00 4.37 R
4822 7923 0.032952 TCGAGGTGAAACTCCCAACG 59.967 55.0 0.0 0.0 36.74 4.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.819188 GCTTCTGCTCCCATTCCG 58.181 61.111 0.00 0.00 36.03 4.30
18 19 1.078143 GCTTCTGCTCCCATTCCGT 60.078 57.895 0.00 0.00 36.03 4.69
19 20 0.178068 GCTTCTGCTCCCATTCCGTA 59.822 55.000 0.00 0.00 36.03 4.02
20 21 1.941325 CTTCTGCTCCCATTCCGTAC 58.059 55.000 0.00 0.00 0.00 3.67
21 22 0.174845 TTCTGCTCCCATTCCGTACG 59.825 55.000 8.69 8.69 0.00 3.67
22 23 0.968901 TCTGCTCCCATTCCGTACGT 60.969 55.000 15.21 0.00 0.00 3.57
23 24 0.108329 CTGCTCCCATTCCGTACGTT 60.108 55.000 15.21 0.00 0.00 3.99
24 25 0.108520 TGCTCCCATTCCGTACGTTC 60.109 55.000 15.21 0.00 0.00 3.95
25 26 0.175073 GCTCCCATTCCGTACGTTCT 59.825 55.000 15.21 0.00 0.00 3.01
26 27 1.801765 GCTCCCATTCCGTACGTTCTC 60.802 57.143 15.21 0.00 0.00 2.87
27 28 1.475280 CTCCCATTCCGTACGTTCTCA 59.525 52.381 15.21 0.00 0.00 3.27
28 29 2.100916 CTCCCATTCCGTACGTTCTCAT 59.899 50.000 15.21 0.00 0.00 2.90
29 30 3.289836 TCCCATTCCGTACGTTCTCATA 58.710 45.455 15.21 0.00 0.00 2.15
30 31 3.067180 TCCCATTCCGTACGTTCTCATAC 59.933 47.826 15.21 0.00 0.00 2.39
31 32 3.067742 CCCATTCCGTACGTTCTCATACT 59.932 47.826 15.21 0.00 0.00 2.12
32 33 4.288531 CCATTCCGTACGTTCTCATACTC 58.711 47.826 15.21 0.00 0.00 2.59
33 34 4.036498 CCATTCCGTACGTTCTCATACTCT 59.964 45.833 15.21 0.00 0.00 3.24
34 35 5.450137 CCATTCCGTACGTTCTCATACTCTT 60.450 44.000 15.21 0.00 0.00 2.85
35 36 5.633830 TTCCGTACGTTCTCATACTCTTT 57.366 39.130 15.21 0.00 0.00 2.52
36 37 5.227238 TCCGTACGTTCTCATACTCTTTC 57.773 43.478 15.21 0.00 0.00 2.62
37 38 4.940046 TCCGTACGTTCTCATACTCTTTCT 59.060 41.667 15.21 0.00 0.00 2.52
38 39 5.029014 CCGTACGTTCTCATACTCTTTCTG 58.971 45.833 15.21 0.00 0.00 3.02
39 40 5.391736 CCGTACGTTCTCATACTCTTTCTGT 60.392 44.000 15.21 0.00 0.00 3.41
40 41 6.084925 CGTACGTTCTCATACTCTTTCTGTT 58.915 40.000 7.22 0.00 0.00 3.16
41 42 6.032565 CGTACGTTCTCATACTCTTTCTGTTG 59.967 42.308 7.22 0.00 0.00 3.33
42 43 5.230942 ACGTTCTCATACTCTTTCTGTTGG 58.769 41.667 0.00 0.00 0.00 3.77
43 44 5.010719 ACGTTCTCATACTCTTTCTGTTGGA 59.989 40.000 0.00 0.00 0.00 3.53
44 45 5.574830 CGTTCTCATACTCTTTCTGTTGGAG 59.425 44.000 0.00 0.00 0.00 3.86
45 46 5.667539 TCTCATACTCTTTCTGTTGGAGG 57.332 43.478 0.00 0.00 0.00 4.30
46 47 5.087323 TCTCATACTCTTTCTGTTGGAGGT 58.913 41.667 0.00 0.00 0.00 3.85
47 48 5.544176 TCTCATACTCTTTCTGTTGGAGGTT 59.456 40.000 0.00 0.00 0.00 3.50
48 49 5.794894 TCATACTCTTTCTGTTGGAGGTTC 58.205 41.667 0.00 0.00 0.00 3.62
49 50 5.544176 TCATACTCTTTCTGTTGGAGGTTCT 59.456 40.000 0.00 0.00 0.00 3.01
50 51 4.078639 ACTCTTTCTGTTGGAGGTTCTG 57.921 45.455 0.00 0.00 0.00 3.02
51 52 3.456277 ACTCTTTCTGTTGGAGGTTCTGT 59.544 43.478 0.00 0.00 0.00 3.41
52 53 4.061596 CTCTTTCTGTTGGAGGTTCTGTC 58.938 47.826 0.00 0.00 0.00 3.51
53 54 3.454447 TCTTTCTGTTGGAGGTTCTGTCA 59.546 43.478 0.00 0.00 0.00 3.58
54 55 2.910688 TCTGTTGGAGGTTCTGTCAC 57.089 50.000 0.00 0.00 0.00 3.67
55 56 2.115427 TCTGTTGGAGGTTCTGTCACA 58.885 47.619 0.00 0.00 0.00 3.58
56 57 2.503765 TCTGTTGGAGGTTCTGTCACAA 59.496 45.455 0.00 0.00 0.00 3.33
57 58 2.614057 CTGTTGGAGGTTCTGTCACAAC 59.386 50.000 0.00 0.00 38.81 3.32
58 59 2.238646 TGTTGGAGGTTCTGTCACAACT 59.761 45.455 0.00 0.00 39.03 3.16
59 60 3.279434 GTTGGAGGTTCTGTCACAACTT 58.721 45.455 0.00 0.00 36.28 2.66
60 61 3.194005 TGGAGGTTCTGTCACAACTTC 57.806 47.619 0.00 0.00 0.00 3.01
61 62 2.771943 TGGAGGTTCTGTCACAACTTCT 59.228 45.455 3.70 0.00 32.02 2.85
62 63 3.199946 TGGAGGTTCTGTCACAACTTCTT 59.800 43.478 3.70 0.00 32.02 2.52
63 64 3.561725 GGAGGTTCTGTCACAACTTCTTG 59.438 47.826 3.70 0.00 32.02 3.02
64 65 2.945668 AGGTTCTGTCACAACTTCTTGC 59.054 45.455 0.00 0.00 0.00 4.01
65 66 2.945668 GGTTCTGTCACAACTTCTTGCT 59.054 45.455 0.00 0.00 0.00 3.91
66 67 3.002759 GGTTCTGTCACAACTTCTTGCTC 59.997 47.826 0.00 0.00 0.00 4.26
67 68 3.827008 TCTGTCACAACTTCTTGCTCT 57.173 42.857 0.00 0.00 0.00 4.09
68 69 4.937201 TCTGTCACAACTTCTTGCTCTA 57.063 40.909 0.00 0.00 0.00 2.43
69 70 4.876125 TCTGTCACAACTTCTTGCTCTAG 58.124 43.478 0.00 0.00 0.00 2.43
70 71 4.342378 TCTGTCACAACTTCTTGCTCTAGT 59.658 41.667 0.00 0.00 0.00 2.57
71 72 4.371786 TGTCACAACTTCTTGCTCTAGTG 58.628 43.478 0.00 0.00 0.00 2.74
72 73 4.141937 TGTCACAACTTCTTGCTCTAGTGT 60.142 41.667 0.00 0.00 0.00 3.55
73 74 4.446051 GTCACAACTTCTTGCTCTAGTGTC 59.554 45.833 0.00 0.00 0.00 3.67
74 75 4.342378 TCACAACTTCTTGCTCTAGTGTCT 59.658 41.667 0.00 0.00 0.00 3.41
75 76 4.447054 CACAACTTCTTGCTCTAGTGTCTG 59.553 45.833 0.00 0.00 0.00 3.51
76 77 4.100189 ACAACTTCTTGCTCTAGTGTCTGT 59.900 41.667 0.00 0.00 0.00 3.41
77 78 4.946478 ACTTCTTGCTCTAGTGTCTGTT 57.054 40.909 0.00 0.00 0.00 3.16
78 79 4.877282 ACTTCTTGCTCTAGTGTCTGTTC 58.123 43.478 0.00 0.00 0.00 3.18
79 80 4.586841 ACTTCTTGCTCTAGTGTCTGTTCT 59.413 41.667 0.00 0.00 0.00 3.01
80 81 5.770663 ACTTCTTGCTCTAGTGTCTGTTCTA 59.229 40.000 0.00 0.00 0.00 2.10
81 82 5.888691 TCTTGCTCTAGTGTCTGTTCTAG 57.111 43.478 0.00 0.00 36.10 2.43
82 83 5.561679 TCTTGCTCTAGTGTCTGTTCTAGA 58.438 41.667 0.00 0.00 39.84 2.43
83 84 6.184068 TCTTGCTCTAGTGTCTGTTCTAGAT 58.816 40.000 0.00 0.00 40.82 1.98
84 85 5.826601 TGCTCTAGTGTCTGTTCTAGATG 57.173 43.478 0.00 0.00 40.82 2.90
85 86 5.257262 TGCTCTAGTGTCTGTTCTAGATGT 58.743 41.667 0.00 0.00 40.82 3.06
86 87 5.124617 TGCTCTAGTGTCTGTTCTAGATGTG 59.875 44.000 0.00 0.00 40.82 3.21
87 88 5.124776 GCTCTAGTGTCTGTTCTAGATGTGT 59.875 44.000 0.00 0.00 40.82 3.72
88 89 6.349777 GCTCTAGTGTCTGTTCTAGATGTGTT 60.350 42.308 0.00 0.00 40.82 3.32
89 90 7.147143 TCTAGTGTCTGTTCTAGATGTGTTC 57.853 40.000 0.00 0.00 38.05 3.18
90 91 4.799678 AGTGTCTGTTCTAGATGTGTTCG 58.200 43.478 0.00 0.00 37.83 3.95
91 92 3.921021 GTGTCTGTTCTAGATGTGTTCGG 59.079 47.826 0.00 0.00 37.83 4.30
92 93 3.572682 TGTCTGTTCTAGATGTGTTCGGT 59.427 43.478 0.00 0.00 37.83 4.69
93 94 4.038763 TGTCTGTTCTAGATGTGTTCGGTT 59.961 41.667 0.00 0.00 37.83 4.44
94 95 4.621886 GTCTGTTCTAGATGTGTTCGGTTC 59.378 45.833 0.00 0.00 37.83 3.62
95 96 4.523173 TCTGTTCTAGATGTGTTCGGTTCT 59.477 41.667 0.00 0.00 0.00 3.01
96 97 5.708697 TCTGTTCTAGATGTGTTCGGTTCTA 59.291 40.000 0.00 0.00 0.00 2.10
97 98 5.950883 TGTTCTAGATGTGTTCGGTTCTAG 58.049 41.667 0.00 0.00 39.23 2.43
98 99 5.475909 TGTTCTAGATGTGTTCGGTTCTAGT 59.524 40.000 0.00 0.00 39.03 2.57
99 100 6.015688 TGTTCTAGATGTGTTCGGTTCTAGTT 60.016 38.462 0.00 0.00 39.03 2.24
100 101 6.192234 TCTAGATGTGTTCGGTTCTAGTTC 57.808 41.667 0.00 0.00 39.03 3.01
101 102 4.866508 AGATGTGTTCGGTTCTAGTTCA 57.133 40.909 0.00 0.00 0.00 3.18
102 103 5.407407 AGATGTGTTCGGTTCTAGTTCAT 57.593 39.130 0.00 0.00 0.00 2.57
103 104 6.525578 AGATGTGTTCGGTTCTAGTTCATA 57.474 37.500 0.00 0.00 0.00 2.15
104 105 7.113658 AGATGTGTTCGGTTCTAGTTCATAT 57.886 36.000 0.00 0.00 0.00 1.78
105 106 8.234136 AGATGTGTTCGGTTCTAGTTCATATA 57.766 34.615 0.00 0.00 0.00 0.86
106 107 8.861086 AGATGTGTTCGGTTCTAGTTCATATAT 58.139 33.333 0.00 0.00 0.00 0.86
107 108 8.818141 ATGTGTTCGGTTCTAGTTCATATATG 57.182 34.615 6.36 6.36 0.00 1.78
108 109 6.700081 TGTGTTCGGTTCTAGTTCATATATGC 59.300 38.462 7.92 0.00 0.00 3.14
109 110 6.700081 GTGTTCGGTTCTAGTTCATATATGCA 59.300 38.462 7.92 0.00 0.00 3.96
110 111 6.923508 TGTTCGGTTCTAGTTCATATATGCAG 59.076 38.462 7.92 3.10 0.00 4.41
111 112 6.894339 TCGGTTCTAGTTCATATATGCAGA 57.106 37.500 7.92 5.23 0.00 4.26
112 113 7.468141 TCGGTTCTAGTTCATATATGCAGAT 57.532 36.000 7.92 0.00 0.00 2.90
113 114 7.315890 TCGGTTCTAGTTCATATATGCAGATG 58.684 38.462 7.92 1.85 0.00 2.90
114 115 6.035435 CGGTTCTAGTTCATATATGCAGATGC 59.965 42.308 7.92 0.00 42.50 3.91
115 116 7.102346 GGTTCTAGTTCATATATGCAGATGCT 58.898 38.462 7.92 0.00 42.66 3.79
116 117 8.253810 GGTTCTAGTTCATATATGCAGATGCTA 58.746 37.037 7.92 0.00 42.66 3.49
117 118 9.814899 GTTCTAGTTCATATATGCAGATGCTAT 57.185 33.333 7.92 4.59 42.66 2.97
120 121 9.813446 CTAGTTCATATATGCAGATGCTATTCA 57.187 33.333 7.92 0.00 42.66 2.57
121 122 8.489990 AGTTCATATATGCAGATGCTATTCAC 57.510 34.615 7.92 0.00 42.66 3.18
122 123 7.551974 AGTTCATATATGCAGATGCTATTCACC 59.448 37.037 7.92 0.00 42.66 4.02
123 124 7.191593 TCATATATGCAGATGCTATTCACCT 57.808 36.000 7.92 0.00 42.66 4.00
124 125 7.627311 TCATATATGCAGATGCTATTCACCTT 58.373 34.615 7.92 0.00 42.66 3.50
125 126 7.767659 TCATATATGCAGATGCTATTCACCTTC 59.232 37.037 7.92 0.00 42.66 3.46
126 127 3.920231 TGCAGATGCTATTCACCTTCT 57.080 42.857 6.35 0.00 42.66 2.85
127 128 3.801698 TGCAGATGCTATTCACCTTCTC 58.198 45.455 6.35 0.00 42.66 2.87
128 129 3.453717 TGCAGATGCTATTCACCTTCTCT 59.546 43.478 6.35 0.00 42.66 3.10
129 130 4.057432 GCAGATGCTATTCACCTTCTCTC 58.943 47.826 0.00 0.00 38.21 3.20
130 131 4.202243 GCAGATGCTATTCACCTTCTCTCT 60.202 45.833 0.00 0.00 38.21 3.10
131 132 5.291178 CAGATGCTATTCACCTTCTCTCTG 58.709 45.833 0.00 0.00 0.00 3.35
132 133 4.961730 AGATGCTATTCACCTTCTCTCTGT 59.038 41.667 0.00 0.00 0.00 3.41
133 134 4.727507 TGCTATTCACCTTCTCTCTGTC 57.272 45.455 0.00 0.00 0.00 3.51
134 135 4.089361 TGCTATTCACCTTCTCTCTGTCA 58.911 43.478 0.00 0.00 0.00 3.58
135 136 4.528206 TGCTATTCACCTTCTCTCTGTCAA 59.472 41.667 0.00 0.00 0.00 3.18
136 137 5.012046 TGCTATTCACCTTCTCTCTGTCAAA 59.988 40.000 0.00 0.00 0.00 2.69
137 138 6.112058 GCTATTCACCTTCTCTCTGTCAAAT 58.888 40.000 0.00 0.00 0.00 2.32
138 139 6.597280 GCTATTCACCTTCTCTCTGTCAAATT 59.403 38.462 0.00 0.00 0.00 1.82
139 140 6.814506 ATTCACCTTCTCTCTGTCAAATTG 57.185 37.500 0.00 0.00 0.00 2.32
140 141 4.067896 TCACCTTCTCTCTGTCAAATTGC 58.932 43.478 0.00 0.00 0.00 3.56
141 142 3.817084 CACCTTCTCTCTGTCAAATTGCA 59.183 43.478 0.00 0.00 0.00 4.08
142 143 4.458295 CACCTTCTCTCTGTCAAATTGCAT 59.542 41.667 0.00 0.00 0.00 3.96
143 144 4.458295 ACCTTCTCTCTGTCAAATTGCATG 59.542 41.667 0.00 0.00 0.00 4.06
144 145 4.698780 CCTTCTCTCTGTCAAATTGCATGA 59.301 41.667 0.00 0.00 0.00 3.07
145 146 5.391736 CCTTCTCTCTGTCAAATTGCATGAC 60.392 44.000 11.24 11.24 45.82 3.06
146 147 4.903054 TCTCTCTGTCAAATTGCATGACT 58.097 39.130 17.40 0.00 45.81 3.41
147 148 5.311265 TCTCTCTGTCAAATTGCATGACTT 58.689 37.500 17.40 0.00 45.81 3.01
148 149 5.180680 TCTCTCTGTCAAATTGCATGACTTG 59.819 40.000 17.40 11.39 45.81 3.16
160 161 3.198863 CATGACTTGCTTTGTCTCTGC 57.801 47.619 0.00 0.00 35.63 4.26
161 162 2.627515 TGACTTGCTTTGTCTCTGCT 57.372 45.000 0.00 0.00 35.63 4.24
162 163 3.751479 TGACTTGCTTTGTCTCTGCTA 57.249 42.857 0.00 0.00 35.63 3.49
163 164 4.277515 TGACTTGCTTTGTCTCTGCTAT 57.722 40.909 0.00 0.00 35.63 2.97
164 165 5.405935 TGACTTGCTTTGTCTCTGCTATA 57.594 39.130 0.00 0.00 35.63 1.31
165 166 5.982356 TGACTTGCTTTGTCTCTGCTATAT 58.018 37.500 0.00 0.00 35.63 0.86
166 167 6.409704 TGACTTGCTTTGTCTCTGCTATATT 58.590 36.000 0.00 0.00 35.63 1.28
167 168 7.555965 TGACTTGCTTTGTCTCTGCTATATTA 58.444 34.615 0.00 0.00 35.63 0.98
168 169 7.708322 TGACTTGCTTTGTCTCTGCTATATTAG 59.292 37.037 0.00 0.00 35.63 1.73
169 170 7.560368 ACTTGCTTTGTCTCTGCTATATTAGT 58.440 34.615 0.00 0.00 0.00 2.24
170 171 7.708752 ACTTGCTTTGTCTCTGCTATATTAGTC 59.291 37.037 0.00 0.00 0.00 2.59
171 172 7.112452 TGCTTTGTCTCTGCTATATTAGTCA 57.888 36.000 0.00 0.00 0.00 3.41
172 173 7.730084 TGCTTTGTCTCTGCTATATTAGTCAT 58.270 34.615 0.00 0.00 0.00 3.06
173 174 7.654923 TGCTTTGTCTCTGCTATATTAGTCATG 59.345 37.037 0.00 0.00 0.00 3.07
174 175 7.359933 GCTTTGTCTCTGCTATATTAGTCATGC 60.360 40.741 0.00 0.00 0.00 4.06
175 176 6.907853 TGTCTCTGCTATATTAGTCATGCT 57.092 37.500 0.00 0.00 0.00 3.79
176 177 7.295322 TGTCTCTGCTATATTAGTCATGCTT 57.705 36.000 0.00 0.00 0.00 3.91
177 178 7.730084 TGTCTCTGCTATATTAGTCATGCTTT 58.270 34.615 0.00 0.00 0.00 3.51
178 179 8.860088 TGTCTCTGCTATATTAGTCATGCTTTA 58.140 33.333 0.00 0.00 0.00 1.85
179 180 9.868277 GTCTCTGCTATATTAGTCATGCTTTAT 57.132 33.333 0.00 0.00 0.00 1.40
191 192 9.692749 TTAGTCATGCTTTATCTAGTATTTCGG 57.307 33.333 0.00 0.00 0.00 4.30
192 193 7.727181 AGTCATGCTTTATCTAGTATTTCGGT 58.273 34.615 0.00 0.00 0.00 4.69
193 194 8.204836 AGTCATGCTTTATCTAGTATTTCGGTT 58.795 33.333 0.00 0.00 0.00 4.44
194 195 9.472361 GTCATGCTTTATCTAGTATTTCGGTTA 57.528 33.333 0.00 0.00 0.00 2.85
229 230 8.973835 TTCGGTAAATTGTTCATATTTCCAAC 57.026 30.769 0.00 0.00 0.00 3.77
230 231 8.112016 TCGGTAAATTGTTCATATTTCCAACA 57.888 30.769 0.00 0.00 0.00 3.33
231 232 8.240682 TCGGTAAATTGTTCATATTTCCAACAG 58.759 33.333 0.00 0.00 31.81 3.16
232 233 7.487829 CGGTAAATTGTTCATATTTCCAACAGG 59.512 37.037 0.00 0.00 31.81 4.00
233 234 8.311109 GGTAAATTGTTCATATTTCCAACAGGT 58.689 33.333 0.00 0.00 31.81 4.00
236 237 8.415950 AATTGTTCATATTTCCAACAGGTACA 57.584 30.769 0.00 0.00 31.81 2.90
237 238 7.825331 TTGTTCATATTTCCAACAGGTACAA 57.175 32.000 0.00 0.00 31.81 2.41
238 239 7.209471 TGTTCATATTTCCAACAGGTACAAC 57.791 36.000 0.00 0.00 0.00 3.32
239 240 6.773200 TGTTCATATTTCCAACAGGTACAACA 59.227 34.615 0.00 0.00 0.00 3.33
240 241 7.040755 TGTTCATATTTCCAACAGGTACAACAG 60.041 37.037 0.00 0.00 0.00 3.16
241 242 6.539173 TCATATTTCCAACAGGTACAACAGT 58.461 36.000 0.00 0.00 0.00 3.55
248 249 3.419759 GGTACAACAGTGGCGGCG 61.420 66.667 0.51 0.51 0.00 6.46
289 291 0.674895 AAGCACAAGAGGATGTCCGC 60.675 55.000 0.00 0.00 42.08 5.54
354 356 1.882352 GCCCAGTCGTCAAAGTCCAAT 60.882 52.381 0.00 0.00 0.00 3.16
358 360 3.130633 CAGTCGTCAAAGTCCAATGTGA 58.869 45.455 0.00 0.00 0.00 3.58
375 377 0.323629 TGACGGATGTCCAAACTCCC 59.676 55.000 0.00 0.00 44.86 4.30
399 402 1.668826 ACCTCCCCTAGTTTGATGCA 58.331 50.000 0.00 0.00 0.00 3.96
407 410 3.947834 CCCTAGTTTGATGCAGGTTTAGG 59.052 47.826 0.00 0.00 0.00 2.69
408 411 4.324254 CCCTAGTTTGATGCAGGTTTAGGA 60.324 45.833 11.28 0.00 30.38 2.94
412 416 6.272822 AGTTTGATGCAGGTTTAGGAATTC 57.727 37.500 0.00 0.00 0.00 2.17
421 425 4.627467 CAGGTTTAGGAATTCTCAGACGTG 59.373 45.833 5.23 7.01 0.00 4.49
432 436 2.035449 TCTCAGACGTGTGAATCCGTTT 59.965 45.455 16.86 0.00 37.44 3.60
433 437 2.131972 TCAGACGTGTGAATCCGTTTG 58.868 47.619 13.72 0.00 39.64 2.93
443 447 6.415280 CGTGTGAATCCGTTTGAACAAATTTA 59.585 34.615 3.34 0.00 32.36 1.40
483 499 0.523072 CAAAAGGGTGTGGAGCATCG 59.477 55.000 0.00 0.00 34.37 3.84
503 523 3.311322 TCGCGAATATTTGAAGGCGATTT 59.689 39.130 6.20 0.00 46.37 2.17
505 525 3.730715 GCGAATATTTGAAGGCGATTTGG 59.269 43.478 6.89 0.00 0.00 3.28
513 2416 1.376609 AAGGCGATTTGGTGATCCGC 61.377 55.000 0.00 0.00 36.30 5.54
533 2436 1.822506 GTTGGAGTTGCCCTTACCTC 58.177 55.000 0.00 0.00 34.97 3.85
539 2442 3.082548 GAGTTGCCCTTACCTCCTTTTC 58.917 50.000 0.00 0.00 0.00 2.29
581 2488 0.598065 GTTCCAAGGCGCAAATGAGT 59.402 50.000 10.83 0.00 0.00 3.41
623 2530 0.251787 GGTGGCAAAGGGGAATCTGT 60.252 55.000 0.00 0.00 0.00 3.41
647 2554 3.418068 GTCCGTGTCTGCAGCTGC 61.418 66.667 31.89 31.89 42.50 5.25
656 2563 1.134075 CTGCAGCTGCGTTCACATC 59.866 57.895 32.11 4.71 45.83 3.06
697 2605 2.439507 TCAACAGCCCTAATCCTCATCC 59.560 50.000 0.00 0.00 0.00 3.51
830 2741 2.961526 AATACTCCGTGTACTGCCAG 57.038 50.000 0.00 0.00 33.45 4.85
834 2745 0.532573 CTCCGTGTACTGCCAGATGT 59.467 55.000 0.00 0.00 0.00 3.06
894 2805 2.786777 TCATGCAAACTCAGATGTGCT 58.213 42.857 0.00 0.00 37.87 4.40
917 2828 1.790387 GCAATGGCGTCACTGTCTC 59.210 57.895 0.00 0.00 0.00 3.36
926 2837 3.321497 GCGTCACTGTCTCAAGAATCTT 58.679 45.455 0.00 0.00 0.00 2.40
974 3743 3.395607 TCCCATGCTCCTATTAAGTGCAT 59.604 43.478 0.00 0.00 39.81 3.96
975 3744 4.597075 TCCCATGCTCCTATTAAGTGCATA 59.403 41.667 0.00 0.00 38.27 3.14
977 3746 5.948162 CCCATGCTCCTATTAAGTGCATAAT 59.052 40.000 0.00 0.00 38.27 1.28
979 3748 7.310664 CCATGCTCCTATTAAGTGCATAATTG 58.689 38.462 0.00 0.00 38.27 2.32
980 3749 7.040201 CCATGCTCCTATTAAGTGCATAATTGT 60.040 37.037 0.00 0.00 38.27 2.71
981 3750 7.496529 TGCTCCTATTAAGTGCATAATTGTC 57.503 36.000 0.00 0.00 0.00 3.18
982 3751 6.202762 TGCTCCTATTAAGTGCATAATTGTCG 59.797 38.462 0.00 0.00 0.00 4.35
984 3753 7.042051 GCTCCTATTAAGTGCATAATTGTCGAA 60.042 37.037 0.00 0.00 0.00 3.71
985 3754 8.138365 TCCTATTAAGTGCATAATTGTCGAAC 57.862 34.615 0.00 0.00 0.00 3.95
986 3755 7.766738 TCCTATTAAGTGCATAATTGTCGAACA 59.233 33.333 0.00 0.00 0.00 3.18
1034 3825 3.583806 CTCAGTTCAGCTTCACAGGTAG 58.416 50.000 0.00 0.00 0.00 3.18
1035 3826 2.965831 TCAGTTCAGCTTCACAGGTAGT 59.034 45.455 0.00 0.00 0.00 2.73
1036 3827 4.149598 TCAGTTCAGCTTCACAGGTAGTA 58.850 43.478 0.00 0.00 0.00 1.82
1050 3841 0.038526 GTAGTACGTGGCTGCAGTGT 60.039 55.000 16.64 11.40 0.00 3.55
1078 3876 1.867919 AAGAGCTCACCCGTCACTCG 61.868 60.000 17.77 0.00 39.52 4.18
1079 3877 3.973267 GAGCTCACCCGTCACTCGC 62.973 68.421 9.40 0.00 38.35 5.03
1080 3878 4.057428 GCTCACCCGTCACTCGCT 62.057 66.667 0.00 0.00 38.35 4.93
1081 3879 2.697761 GCTCACCCGTCACTCGCTA 61.698 63.158 0.00 0.00 38.35 4.26
1338 4136 7.859377 CAGTATAACTGTGTTATGTAGTACCGG 59.141 40.741 0.00 0.00 41.19 5.28
1345 4151 0.756442 TATGTAGTACCGGGCGCCTT 60.756 55.000 28.56 13.73 0.00 4.35
1363 4169 1.206745 TTATCTAGCTTGACGCGCGC 61.207 55.000 32.58 23.91 45.59 6.86
1506 4312 1.888512 CAAGGCACTGCAGGTAACATT 59.111 47.619 19.93 5.18 40.86 2.71
1608 4414 9.899226 GCTTTCAAGAATAGTTACTGAACAATT 57.101 29.630 0.00 0.00 38.10 2.32
1970 4781 6.433093 AGGAAACATAATGGTTGACAGGTAAC 59.567 38.462 0.00 0.00 0.00 2.50
2008 4820 0.261991 TGAAGTCTCCCCTCGGCTAT 59.738 55.000 0.00 0.00 0.00 2.97
2011 4823 2.296073 AGTCTCCCCTCGGCTATAAG 57.704 55.000 0.00 0.00 0.00 1.73
2028 4840 5.471456 GCTATAAGGCTGCATATGTTTCTGT 59.529 40.000 4.29 0.00 0.00 3.41
2034 4847 7.174107 AGGCTGCATATGTTTCTGTTAAAAT 57.826 32.000 4.29 0.00 0.00 1.82
2088 4902 9.520204 CTCTGTACCAAAATATAAGGCATTTTG 57.480 33.333 11.68 11.68 46.10 2.44
2136 4950 7.133133 ACGTCTTATATTTTGGTATGGAGGT 57.867 36.000 0.00 0.00 0.00 3.85
2249 5068 6.658188 AATTGATTTTTGGTCGGAACCTTA 57.342 33.333 0.00 0.00 46.60 2.69
2743 5726 6.293845 CCTGATTATCTGCTGCAATAACCTTC 60.294 42.308 3.02 6.72 0.00 3.46
2860 5843 2.505819 CCCAGGCCATACTGAAGTAAGT 59.494 50.000 5.01 0.00 40.97 2.24
2994 5993 7.497773 AGGTTATAAATATAGTGCTCCCTCC 57.502 40.000 0.00 0.00 0.00 4.30
2995 5994 6.154706 AGGTTATAAATATAGTGCTCCCTCCG 59.845 42.308 0.00 0.00 0.00 4.63
2998 5997 1.926108 ATATAGTGCTCCCTCCGTCC 58.074 55.000 0.00 0.00 0.00 4.79
2999 5998 0.178970 TATAGTGCTCCCTCCGTCCC 60.179 60.000 0.00 0.00 0.00 4.46
3002 6001 2.528127 TGCTCCCTCCGTCCCAAA 60.528 61.111 0.00 0.00 0.00 3.28
3003 6002 2.150719 TGCTCCCTCCGTCCCAAAA 61.151 57.895 0.00 0.00 0.00 2.44
3004 6003 1.303282 GCTCCCTCCGTCCCAAAAT 59.697 57.895 0.00 0.00 0.00 1.82
3005 6004 0.323451 GCTCCCTCCGTCCCAAAATT 60.323 55.000 0.00 0.00 0.00 1.82
3006 6005 1.751437 CTCCCTCCGTCCCAAAATTC 58.249 55.000 0.00 0.00 0.00 2.17
3007 6006 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3008 6007 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3009 6008 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3010 6009 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3011 6010 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3014 6013 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3015 6014 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
3017 6016 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
3018 6017 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
3019 6018 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
3020 6019 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
3021 6020 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
3022 6021 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
3023 6022 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
3030 6029 9.569167 TTCTTGTCTTAGATTTGTCTACATACG 57.431 33.333 0.00 0.00 0.00 3.06
3031 6030 8.188799 TCTTGTCTTAGATTTGTCTACATACGG 58.811 37.037 0.00 0.00 0.00 4.02
3032 6031 7.634671 TGTCTTAGATTTGTCTACATACGGA 57.365 36.000 0.00 0.00 0.00 4.69
3033 6032 8.234136 TGTCTTAGATTTGTCTACATACGGAT 57.766 34.615 0.00 0.00 0.00 4.18
3034 6033 8.135529 TGTCTTAGATTTGTCTACATACGGATG 58.864 37.037 5.94 5.94 39.16 3.51
3036 6035 9.346005 TCTTAGATTTGTCTACATACGGATGTA 57.654 33.333 19.32 19.32 44.77 2.29
3039 6038 8.410673 AGATTTGTCTACATACGGATGTATCT 57.589 34.615 20.64 16.58 45.42 1.98
3040 6039 9.516546 AGATTTGTCTACATACGGATGTATCTA 57.483 33.333 20.64 11.01 45.42 1.98
3044 6043 8.857694 TGTCTACATACGGATGTATCTATTCA 57.142 34.615 20.64 10.60 45.42 2.57
3045 6044 8.727910 TGTCTACATACGGATGTATCTATTCAC 58.272 37.037 20.64 9.33 45.42 3.18
3046 6045 7.903946 GTCTACATACGGATGTATCTATTCACG 59.096 40.741 20.64 6.28 45.42 4.35
3047 6046 6.570672 ACATACGGATGTATCTATTCACGT 57.429 37.500 12.79 0.00 44.77 4.49
3048 6047 6.978338 ACATACGGATGTATCTATTCACGTT 58.022 36.000 12.79 0.00 44.77 3.99
3049 6048 7.431249 ACATACGGATGTATCTATTCACGTTT 58.569 34.615 12.79 0.00 44.77 3.60
3050 6049 7.924412 ACATACGGATGTATCTATTCACGTTTT 59.076 33.333 12.79 0.00 44.77 2.43
3051 6050 9.401873 CATACGGATGTATCTATTCACGTTTTA 57.598 33.333 0.00 0.00 39.28 1.52
3052 6051 7.925703 ACGGATGTATCTATTCACGTTTTAG 57.074 36.000 0.00 0.00 0.00 1.85
3053 6052 7.486647 ACGGATGTATCTATTCACGTTTTAGT 58.513 34.615 0.00 0.00 0.00 2.24
3054 6053 7.434307 ACGGATGTATCTATTCACGTTTTAGTG 59.566 37.037 0.00 0.00 43.11 2.74
3055 6054 7.434307 CGGATGTATCTATTCACGTTTTAGTGT 59.566 37.037 0.00 0.00 42.40 3.55
3056 6055 9.095065 GGATGTATCTATTCACGTTTTAGTGTT 57.905 33.333 0.00 0.00 42.40 3.32
3059 6058 9.079833 TGTATCTATTCACGTTTTAGTGTTAGC 57.920 33.333 0.00 0.00 42.40 3.09
3060 6059 9.298774 GTATCTATTCACGTTTTAGTGTTAGCT 57.701 33.333 0.00 0.00 42.40 3.32
3062 6061 8.679288 TCTATTCACGTTTTAGTGTTAGCTAC 57.321 34.615 0.00 0.00 42.40 3.58
3063 6062 8.298854 TCTATTCACGTTTTAGTGTTAGCTACA 58.701 33.333 0.00 0.00 42.40 2.74
3064 6063 7.900782 ATTCACGTTTTAGTGTTAGCTACAT 57.099 32.000 0.00 0.00 42.40 2.29
3065 6064 6.939551 TCACGTTTTAGTGTTAGCTACATC 57.060 37.500 0.00 0.00 42.40 3.06
3066 6065 5.865552 TCACGTTTTAGTGTTAGCTACATCC 59.134 40.000 0.00 0.00 42.40 3.51
3067 6066 4.860907 ACGTTTTAGTGTTAGCTACATCCG 59.139 41.667 0.00 0.00 39.39 4.18
3068 6067 4.860907 CGTTTTAGTGTTAGCTACATCCGT 59.139 41.667 0.00 0.00 39.39 4.69
3069 6068 6.029607 CGTTTTAGTGTTAGCTACATCCGTA 58.970 40.000 0.00 0.00 39.39 4.02
3070 6069 6.694411 CGTTTTAGTGTTAGCTACATCCGTAT 59.306 38.462 0.00 0.00 39.39 3.06
3071 6070 7.096722 CGTTTTAGTGTTAGCTACATCCGTATC 60.097 40.741 0.00 0.00 39.39 2.24
3072 6071 7.578310 TTTAGTGTTAGCTACATCCGTATCT 57.422 36.000 0.00 0.00 39.39 1.98
3073 6072 8.681486 TTTAGTGTTAGCTACATCCGTATCTA 57.319 34.615 0.00 0.00 39.39 1.98
3074 6073 6.804770 AGTGTTAGCTACATCCGTATCTAG 57.195 41.667 0.00 0.00 39.39 2.43
3075 6074 6.531923 AGTGTTAGCTACATCCGTATCTAGA 58.468 40.000 0.00 0.00 39.39 2.43
3076 6075 7.169591 AGTGTTAGCTACATCCGTATCTAGAT 58.830 38.462 10.73 10.73 39.39 1.98
3077 6076 8.319881 AGTGTTAGCTACATCCGTATCTAGATA 58.680 37.037 8.44 8.44 39.39 1.98
3078 6077 8.944029 GTGTTAGCTACATCCGTATCTAGATAA 58.056 37.037 14.09 0.00 39.39 1.75
3079 6078 9.511272 TGTTAGCTACATCCGTATCTAGATAAA 57.489 33.333 14.09 3.92 30.22 1.40
3102 6101 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
3103 6102 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
3104 6103 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
3105 6104 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
3106 6105 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
3107 6106 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
3108 6107 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
3109 6108 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
3110 6109 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
3111 6110 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3112 6111 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
3113 6112 1.200519 TTTGGGACGGAGGGAGTATG 58.799 55.000 0.00 0.00 0.00 2.39
3124 6123 6.019748 ACGGAGGGAGTATGAGATTATCAAT 58.980 40.000 0.00 0.00 42.53 2.57
3175 6174 9.757227 ACTTCAGAGAACTATGCTTGTATATTC 57.243 33.333 0.00 0.00 0.00 1.75
3270 6275 3.133542 TGCACCATACTGATCTTCTCCTG 59.866 47.826 0.00 0.00 0.00 3.86
3363 6368 0.951558 ACAAACCACTAAAGGCGCTG 59.048 50.000 7.64 0.00 0.00 5.18
3480 6489 6.342819 TCTCCCTAGACTTCCTATCTCAAA 57.657 41.667 0.00 0.00 0.00 2.69
3485 6494 7.234371 TCCCTAGACTTCCTATCTCAAATGATG 59.766 40.741 0.00 0.00 0.00 3.07
3516 6533 8.883731 CCAATATTCAACTGTACCAGAGTTAAG 58.116 37.037 0.00 0.00 35.18 1.85
3580 6613 7.280876 GTGAATTTGCAACTGGATAGTATGAGA 59.719 37.037 0.00 0.00 35.69 3.27
3678 6731 1.544724 TACCTGGATTTGCAAGCCAC 58.455 50.000 16.47 2.94 43.11 5.01
3700 6753 3.805971 CCCCGTAAGATATTCGGTTCAAC 59.194 47.826 9.16 0.00 42.30 3.18
3704 6757 4.025979 CGTAAGATATTCGGTTCAACTGCC 60.026 45.833 0.00 0.00 43.02 4.85
3898 6957 3.456277 GACCAGGTTGATATGAAGTCCCT 59.544 47.826 0.00 0.00 0.00 4.20
3977 7036 6.620429 TGTGGTACTTCATATATCTCTCCCA 58.380 40.000 0.00 0.00 0.00 4.37
4043 7105 4.789012 TGGATCATCCTGCAAAAGAAAC 57.211 40.909 4.96 0.00 37.46 2.78
4049 7111 8.295288 GGATCATCCTGCAAAAGAAACTATATG 58.705 37.037 0.00 0.00 32.53 1.78
4051 7113 8.579850 TCATCCTGCAAAAGAAACTATATGTT 57.420 30.769 0.00 0.00 41.29 2.71
4052 7114 9.679661 TCATCCTGCAAAAGAAACTATATGTTA 57.320 29.630 0.00 0.00 38.03 2.41
4102 7173 9.539825 CAGTCAGTTTAGTAGATCAAGCATATT 57.460 33.333 0.00 0.00 0.00 1.28
4115 7186 8.193438 AGATCAAGCATATTTAGCAAAACCTTC 58.807 33.333 0.00 0.00 0.00 3.46
4121 7192 6.197096 GCATATTTAGCAAAACCTTCGTGATG 59.803 38.462 0.00 0.00 0.00 3.07
4122 7193 5.957842 ATTTAGCAAAACCTTCGTGATGA 57.042 34.783 0.00 0.00 0.00 2.92
4123 7194 5.957842 TTTAGCAAAACCTTCGTGATGAT 57.042 34.783 0.00 0.00 0.00 2.45
4124 7195 5.957842 TTAGCAAAACCTTCGTGATGATT 57.042 34.783 0.00 0.00 0.00 2.57
4125 7196 4.164822 AGCAAAACCTTCGTGATGATTG 57.835 40.909 0.00 0.00 0.00 2.67
4126 7197 2.663119 GCAAAACCTTCGTGATGATTGC 59.337 45.455 0.00 0.00 35.69 3.56
4127 7198 3.612479 GCAAAACCTTCGTGATGATTGCT 60.612 43.478 3.41 0.00 38.96 3.91
4128 7199 4.549458 CAAAACCTTCGTGATGATTGCTT 58.451 39.130 0.00 0.00 0.00 3.91
4129 7200 4.853924 AAACCTTCGTGATGATTGCTTT 57.146 36.364 0.00 0.00 0.00 3.51
4130 7201 4.853924 AACCTTCGTGATGATTGCTTTT 57.146 36.364 0.00 0.00 0.00 2.27
4131 7202 4.164822 ACCTTCGTGATGATTGCTTTTG 57.835 40.909 0.00 0.00 0.00 2.44
4132 7203 3.569701 ACCTTCGTGATGATTGCTTTTGT 59.430 39.130 0.00 0.00 0.00 2.83
4133 7204 4.037923 ACCTTCGTGATGATTGCTTTTGTT 59.962 37.500 0.00 0.00 0.00 2.83
4134 7205 4.618489 CCTTCGTGATGATTGCTTTTGTTC 59.382 41.667 0.00 0.00 0.00 3.18
4135 7206 4.827304 TCGTGATGATTGCTTTTGTTCA 57.173 36.364 0.00 0.00 0.00 3.18
4136 7207 5.375417 TCGTGATGATTGCTTTTGTTCAT 57.625 34.783 0.00 0.00 0.00 2.57
4137 7208 5.771469 TCGTGATGATTGCTTTTGTTCATT 58.229 33.333 0.00 0.00 0.00 2.57
4138 7209 5.630264 TCGTGATGATTGCTTTTGTTCATTG 59.370 36.000 0.00 0.00 0.00 2.82
4139 7210 5.614760 GTGATGATTGCTTTTGTTCATTGC 58.385 37.500 0.00 0.00 0.00 3.56
4140 7211 5.407387 GTGATGATTGCTTTTGTTCATTGCT 59.593 36.000 0.00 0.00 0.00 3.91
4141 7212 5.992829 TGATGATTGCTTTTGTTCATTGCTT 59.007 32.000 0.00 0.00 0.00 3.91
4142 7213 6.483974 TGATGATTGCTTTTGTTCATTGCTTT 59.516 30.769 0.00 0.00 0.00 3.51
4143 7214 6.050454 TGATTGCTTTTGTTCATTGCTTTG 57.950 33.333 0.00 0.00 0.00 2.77
4144 7215 5.585445 TGATTGCTTTTGTTCATTGCTTTGT 59.415 32.000 0.00 0.00 0.00 2.83
4145 7216 5.467902 TTGCTTTTGTTCATTGCTTTGTC 57.532 34.783 0.00 0.00 0.00 3.18
4146 7217 4.502016 TGCTTTTGTTCATTGCTTTGTCA 58.498 34.783 0.00 0.00 0.00 3.58
4147 7218 5.117584 TGCTTTTGTTCATTGCTTTGTCAT 58.882 33.333 0.00 0.00 0.00 3.06
4148 7219 6.279123 TGCTTTTGTTCATTGCTTTGTCATA 58.721 32.000 0.00 0.00 0.00 2.15
4149 7220 6.421501 TGCTTTTGTTCATTGCTTTGTCATAG 59.578 34.615 0.00 0.00 0.00 2.23
4150 7221 6.128742 GCTTTTGTTCATTGCTTTGTCATAGG 60.129 38.462 0.00 0.00 0.00 2.57
4151 7222 6.403866 TTTGTTCATTGCTTTGTCATAGGT 57.596 33.333 0.00 0.00 0.00 3.08
4152 7223 6.403866 TTGTTCATTGCTTTGTCATAGGTT 57.596 33.333 0.00 0.00 0.00 3.50
4153 7224 5.771469 TGTTCATTGCTTTGTCATAGGTTG 58.229 37.500 0.00 0.00 0.00 3.77
4154 7225 4.439305 TCATTGCTTTGTCATAGGTTGC 57.561 40.909 0.00 0.00 0.00 4.17
4155 7226 3.193267 TCATTGCTTTGTCATAGGTTGCC 59.807 43.478 0.00 0.00 0.00 4.52
4156 7227 2.584835 TGCTTTGTCATAGGTTGCCT 57.415 45.000 0.00 0.00 37.71 4.75
4157 7228 2.875296 TGCTTTGTCATAGGTTGCCTT 58.125 42.857 0.00 0.00 34.61 4.35
4158 7229 3.230134 TGCTTTGTCATAGGTTGCCTTT 58.770 40.909 0.00 0.00 34.61 3.11
4159 7230 3.640967 TGCTTTGTCATAGGTTGCCTTTT 59.359 39.130 0.00 0.00 34.61 2.27
4160 7231 4.237724 GCTTTGTCATAGGTTGCCTTTTC 58.762 43.478 0.00 0.00 34.61 2.29
4161 7232 4.809673 CTTTGTCATAGGTTGCCTTTTCC 58.190 43.478 0.00 0.00 34.61 3.13
4162 7233 3.517296 TGTCATAGGTTGCCTTTTCCA 57.483 42.857 0.00 0.00 34.61 3.53
4163 7234 3.153919 TGTCATAGGTTGCCTTTTCCAC 58.846 45.455 0.00 0.00 34.61 4.02
4164 7235 3.153919 GTCATAGGTTGCCTTTTCCACA 58.846 45.455 0.00 0.00 34.61 4.17
4165 7236 3.572255 GTCATAGGTTGCCTTTTCCACAA 59.428 43.478 0.00 0.00 34.61 3.33
4166 7237 4.038642 GTCATAGGTTGCCTTTTCCACAAA 59.961 41.667 0.00 0.00 34.61 2.83
4167 7238 4.651503 TCATAGGTTGCCTTTTCCACAAAA 59.348 37.500 0.00 0.00 34.61 2.44
4168 7239 3.260475 AGGTTGCCTTTTCCACAAAAC 57.740 42.857 0.00 0.00 0.00 2.43
4169 7240 2.569404 AGGTTGCCTTTTCCACAAAACA 59.431 40.909 0.00 0.00 0.00 2.83
4170 7241 3.008485 AGGTTGCCTTTTCCACAAAACAA 59.992 39.130 0.00 0.00 0.00 2.83
4171 7242 3.944650 GGTTGCCTTTTCCACAAAACAAT 59.055 39.130 0.00 0.00 0.00 2.71
4172 7243 5.104735 AGGTTGCCTTTTCCACAAAACAATA 60.105 36.000 0.00 0.00 0.00 1.90
4173 7244 5.586643 GGTTGCCTTTTCCACAAAACAATAA 59.413 36.000 0.00 0.00 0.00 1.40
4174 7245 6.238347 GGTTGCCTTTTCCACAAAACAATAAG 60.238 38.462 0.00 0.00 0.00 1.73
4175 7246 6.227298 TGCCTTTTCCACAAAACAATAAGA 57.773 33.333 0.00 0.00 0.00 2.10
4176 7247 6.644347 TGCCTTTTCCACAAAACAATAAGAA 58.356 32.000 0.00 0.00 0.00 2.52
4177 7248 7.278875 TGCCTTTTCCACAAAACAATAAGAAT 58.721 30.769 0.00 0.00 0.00 2.40
4178 7249 8.424918 TGCCTTTTCCACAAAACAATAAGAATA 58.575 29.630 0.00 0.00 0.00 1.75
4179 7250 9.267084 GCCTTTTCCACAAAACAATAAGAATAA 57.733 29.630 0.00 0.00 0.00 1.40
4212 7284 0.919289 GAAATGGAGGAGGACCCCCA 60.919 60.000 0.00 0.00 38.87 4.96
4247 7323 0.927537 CGATGCATGCAGCCATTTTG 59.072 50.000 28.76 10.94 44.83 2.44
4334 7420 4.202121 TGTCGCTACTCCTATCCAATTGAC 60.202 45.833 7.12 0.00 0.00 3.18
4538 7639 5.621193 AGTTGTACTGTTGCATCTACCTTT 58.379 37.500 0.00 0.00 0.00 3.11
4560 7661 2.573869 GTCTAGCTGCTGCCGACA 59.426 61.111 22.28 4.35 38.87 4.35
4618 7719 2.573009 TGTCCATCACCACACATCTGAT 59.427 45.455 0.00 0.00 0.00 2.90
4734 7835 1.377202 GCCCGAGTGCATCTCCAAA 60.377 57.895 9.71 0.00 39.84 3.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.802880 CGTACGGAATGGGAGCAGAAG 60.803 57.143 7.57 0.00 0.00 2.85
6 7 0.175073 AGAACGTACGGAATGGGAGC 59.825 55.000 21.06 0.00 0.00 4.70
8 9 1.548081 TGAGAACGTACGGAATGGGA 58.452 50.000 21.06 0.00 0.00 4.37
9 10 2.596904 ATGAGAACGTACGGAATGGG 57.403 50.000 21.06 0.00 0.00 4.00
11 12 5.171147 AGAGTATGAGAACGTACGGAATG 57.829 43.478 21.06 0.00 41.70 2.67
12 13 5.831702 AAGAGTATGAGAACGTACGGAAT 57.168 39.130 21.06 5.11 41.70 3.01
13 14 5.413833 AGAAAGAGTATGAGAACGTACGGAA 59.586 40.000 21.06 0.00 41.70 4.30
14 15 4.940046 AGAAAGAGTATGAGAACGTACGGA 59.060 41.667 21.06 0.00 41.70 4.69
15 16 5.029014 CAGAAAGAGTATGAGAACGTACGG 58.971 45.833 21.06 1.43 41.70 4.02
16 17 5.629097 ACAGAAAGAGTATGAGAACGTACG 58.371 41.667 15.01 15.01 41.70 3.67
17 18 6.308282 CCAACAGAAAGAGTATGAGAACGTAC 59.692 42.308 0.00 0.00 38.40 3.67
18 19 6.208007 TCCAACAGAAAGAGTATGAGAACGTA 59.792 38.462 0.00 0.00 0.00 3.57
19 20 5.010719 TCCAACAGAAAGAGTATGAGAACGT 59.989 40.000 0.00 0.00 0.00 3.99
20 21 5.470368 TCCAACAGAAAGAGTATGAGAACG 58.530 41.667 0.00 0.00 0.00 3.95
21 22 5.872070 CCTCCAACAGAAAGAGTATGAGAAC 59.128 44.000 0.00 0.00 0.00 3.01
22 23 5.544176 ACCTCCAACAGAAAGAGTATGAGAA 59.456 40.000 0.00 0.00 0.00 2.87
23 24 5.087323 ACCTCCAACAGAAAGAGTATGAGA 58.913 41.667 0.00 0.00 0.00 3.27
24 25 5.413309 ACCTCCAACAGAAAGAGTATGAG 57.587 43.478 0.00 0.00 0.00 2.90
25 26 5.544176 AGAACCTCCAACAGAAAGAGTATGA 59.456 40.000 0.00 0.00 0.00 2.15
26 27 5.641209 CAGAACCTCCAACAGAAAGAGTATG 59.359 44.000 0.00 0.00 0.00 2.39
27 28 5.308237 ACAGAACCTCCAACAGAAAGAGTAT 59.692 40.000 0.00 0.00 0.00 2.12
28 29 4.654262 ACAGAACCTCCAACAGAAAGAGTA 59.346 41.667 0.00 0.00 0.00 2.59
29 30 3.456277 ACAGAACCTCCAACAGAAAGAGT 59.544 43.478 0.00 0.00 0.00 3.24
30 31 4.061596 GACAGAACCTCCAACAGAAAGAG 58.938 47.826 0.00 0.00 0.00 2.85
31 32 3.454447 TGACAGAACCTCCAACAGAAAGA 59.546 43.478 0.00 0.00 0.00 2.52
32 33 3.561725 GTGACAGAACCTCCAACAGAAAG 59.438 47.826 0.00 0.00 0.00 2.62
33 34 3.054728 TGTGACAGAACCTCCAACAGAAA 60.055 43.478 0.00 0.00 0.00 2.52
34 35 2.503765 TGTGACAGAACCTCCAACAGAA 59.496 45.455 0.00 0.00 0.00 3.02
35 36 2.115427 TGTGACAGAACCTCCAACAGA 58.885 47.619 0.00 0.00 0.00 3.41
36 37 2.614057 GTTGTGACAGAACCTCCAACAG 59.386 50.000 4.13 0.00 34.00 3.16
37 38 2.238646 AGTTGTGACAGAACCTCCAACA 59.761 45.455 11.58 0.00 35.75 3.33
38 39 2.919228 AGTTGTGACAGAACCTCCAAC 58.081 47.619 11.58 3.64 34.01 3.77
39 40 3.199946 AGAAGTTGTGACAGAACCTCCAA 59.800 43.478 11.58 0.00 0.00 3.53
40 41 2.771943 AGAAGTTGTGACAGAACCTCCA 59.228 45.455 11.58 0.00 0.00 3.86
41 42 3.477210 AGAAGTTGTGACAGAACCTCC 57.523 47.619 11.58 2.27 0.00 4.30
42 43 3.002759 GCAAGAAGTTGTGACAGAACCTC 59.997 47.826 11.58 8.69 35.92 3.85
43 44 2.945668 GCAAGAAGTTGTGACAGAACCT 59.054 45.455 11.58 0.00 35.92 3.50
44 45 2.945668 AGCAAGAAGTTGTGACAGAACC 59.054 45.455 11.58 0.00 35.92 3.62
45 46 3.873952 AGAGCAAGAAGTTGTGACAGAAC 59.126 43.478 7.37 7.37 35.92 3.01
46 47 4.142609 AGAGCAAGAAGTTGTGACAGAA 57.857 40.909 0.00 0.00 35.92 3.02
47 48 3.827008 AGAGCAAGAAGTTGTGACAGA 57.173 42.857 0.00 0.00 35.92 3.41
48 49 4.447054 CACTAGAGCAAGAAGTTGTGACAG 59.553 45.833 0.00 0.00 35.92 3.51
49 50 4.141937 ACACTAGAGCAAGAAGTTGTGACA 60.142 41.667 0.00 0.00 35.92 3.58
50 51 4.372656 ACACTAGAGCAAGAAGTTGTGAC 58.627 43.478 0.00 0.00 35.92 3.67
51 52 4.342378 AGACACTAGAGCAAGAAGTTGTGA 59.658 41.667 0.00 0.00 35.92 3.58
52 53 4.447054 CAGACACTAGAGCAAGAAGTTGTG 59.553 45.833 0.00 0.00 35.92 3.33
53 54 4.100189 ACAGACACTAGAGCAAGAAGTTGT 59.900 41.667 0.00 0.00 35.92 3.32
54 55 4.626042 ACAGACACTAGAGCAAGAAGTTG 58.374 43.478 0.00 0.00 36.67 3.16
55 56 4.946478 ACAGACACTAGAGCAAGAAGTT 57.054 40.909 0.00 0.00 0.00 2.66
56 57 4.586841 AGAACAGACACTAGAGCAAGAAGT 59.413 41.667 0.00 0.00 0.00 3.01
57 58 5.132897 AGAACAGACACTAGAGCAAGAAG 57.867 43.478 0.00 0.00 0.00 2.85
58 59 6.004574 TCTAGAACAGACACTAGAGCAAGAA 58.995 40.000 0.00 0.00 39.71 2.52
59 60 5.561679 TCTAGAACAGACACTAGAGCAAGA 58.438 41.667 0.00 0.00 39.71 3.02
60 61 5.888691 TCTAGAACAGACACTAGAGCAAG 57.111 43.478 0.00 0.00 39.71 4.01
61 62 5.712446 ACATCTAGAACAGACACTAGAGCAA 59.288 40.000 0.00 0.00 45.01 3.91
62 63 5.124617 CACATCTAGAACAGACACTAGAGCA 59.875 44.000 0.00 0.00 45.01 4.26
63 64 5.124776 ACACATCTAGAACAGACACTAGAGC 59.875 44.000 0.00 0.00 45.01 4.09
64 65 6.751514 ACACATCTAGAACAGACACTAGAG 57.248 41.667 0.00 0.00 45.01 2.43
65 66 6.128254 CGAACACATCTAGAACAGACACTAGA 60.128 42.308 0.00 0.00 45.58 2.43
66 67 6.024664 CGAACACATCTAGAACAGACACTAG 58.975 44.000 0.00 0.00 35.62 2.57
67 68 5.106277 CCGAACACATCTAGAACAGACACTA 60.106 44.000 0.00 0.00 35.62 2.74
68 69 4.321304 CCGAACACATCTAGAACAGACACT 60.321 45.833 0.00 0.00 35.62 3.55
69 70 3.921021 CCGAACACATCTAGAACAGACAC 59.079 47.826 0.00 0.00 35.62 3.67
70 71 3.572682 ACCGAACACATCTAGAACAGACA 59.427 43.478 0.00 0.00 35.62 3.41
71 72 4.175787 ACCGAACACATCTAGAACAGAC 57.824 45.455 0.00 0.00 35.62 3.51
72 73 4.523173 AGAACCGAACACATCTAGAACAGA 59.477 41.667 0.00 0.00 37.79 3.41
73 74 4.810790 AGAACCGAACACATCTAGAACAG 58.189 43.478 0.00 0.00 0.00 3.16
74 75 4.866508 AGAACCGAACACATCTAGAACA 57.133 40.909 0.00 0.00 0.00 3.18
75 76 5.952033 ACTAGAACCGAACACATCTAGAAC 58.048 41.667 13.85 0.00 42.48 3.01
76 77 6.208007 TGAACTAGAACCGAACACATCTAGAA 59.792 38.462 13.85 0.00 42.48 2.10
77 78 5.708697 TGAACTAGAACCGAACACATCTAGA 59.291 40.000 13.85 0.00 42.48 2.43
78 79 5.950883 TGAACTAGAACCGAACACATCTAG 58.049 41.667 0.00 7.03 44.39 2.43
79 80 5.970317 TGAACTAGAACCGAACACATCTA 57.030 39.130 0.00 0.00 0.00 1.98
80 81 4.866508 TGAACTAGAACCGAACACATCT 57.133 40.909 0.00 0.00 0.00 2.90
81 82 8.916654 CATATATGAACTAGAACCGAACACATC 58.083 37.037 6.92 0.00 0.00 3.06
82 83 7.385205 GCATATATGAACTAGAACCGAACACAT 59.615 37.037 17.10 0.00 0.00 3.21
83 84 6.700081 GCATATATGAACTAGAACCGAACACA 59.300 38.462 17.10 0.00 0.00 3.72
84 85 6.700081 TGCATATATGAACTAGAACCGAACAC 59.300 38.462 17.10 0.00 0.00 3.32
85 86 6.811954 TGCATATATGAACTAGAACCGAACA 58.188 36.000 17.10 0.00 0.00 3.18
86 87 7.145985 TCTGCATATATGAACTAGAACCGAAC 58.854 38.462 17.10 0.00 0.00 3.95
87 88 7.284919 TCTGCATATATGAACTAGAACCGAA 57.715 36.000 17.10 0.00 0.00 4.30
88 89 6.894339 TCTGCATATATGAACTAGAACCGA 57.106 37.500 17.10 0.00 0.00 4.69
89 90 6.035435 GCATCTGCATATATGAACTAGAACCG 59.965 42.308 17.10 7.82 41.59 4.44
90 91 7.102346 AGCATCTGCATATATGAACTAGAACC 58.898 38.462 17.10 8.56 45.16 3.62
91 92 9.814899 ATAGCATCTGCATATATGAACTAGAAC 57.185 33.333 17.10 9.69 45.16 3.01
94 95 9.813446 TGAATAGCATCTGCATATATGAACTAG 57.187 33.333 17.10 8.30 45.16 2.57
95 96 9.591792 GTGAATAGCATCTGCATATATGAACTA 57.408 33.333 17.10 4.27 45.16 2.24
96 97 7.551974 GGTGAATAGCATCTGCATATATGAACT 59.448 37.037 17.10 2.05 45.16 3.01
97 98 7.551974 AGGTGAATAGCATCTGCATATATGAAC 59.448 37.037 17.10 0.19 45.16 3.18
98 99 7.627311 AGGTGAATAGCATCTGCATATATGAA 58.373 34.615 17.10 4.90 45.16 2.57
99 100 7.191593 AGGTGAATAGCATCTGCATATATGA 57.808 36.000 17.10 1.24 45.16 2.15
100 101 7.769507 AGAAGGTGAATAGCATCTGCATATATG 59.230 37.037 8.45 8.45 45.16 1.78
101 102 7.859540 AGAAGGTGAATAGCATCTGCATATAT 58.140 34.615 4.79 0.00 45.16 0.86
102 103 7.179872 AGAGAAGGTGAATAGCATCTGCATATA 59.820 37.037 4.79 0.00 45.16 0.86
103 104 6.013553 AGAGAAGGTGAATAGCATCTGCATAT 60.014 38.462 4.79 0.00 45.16 1.78
104 105 5.306419 AGAGAAGGTGAATAGCATCTGCATA 59.694 40.000 4.79 0.00 45.16 3.14
105 106 4.102838 AGAGAAGGTGAATAGCATCTGCAT 59.897 41.667 4.79 0.00 45.16 3.96
106 107 3.453717 AGAGAAGGTGAATAGCATCTGCA 59.546 43.478 4.79 0.00 45.16 4.41
107 108 4.057432 GAGAGAAGGTGAATAGCATCTGC 58.943 47.826 0.00 0.00 36.81 4.26
108 109 5.163426 ACAGAGAGAAGGTGAATAGCATCTG 60.163 44.000 0.00 0.00 36.81 2.90
109 110 4.961730 ACAGAGAGAAGGTGAATAGCATCT 59.038 41.667 0.00 0.00 40.53 2.90
110 111 5.163468 TGACAGAGAGAAGGTGAATAGCATC 60.163 44.000 0.00 0.00 0.00 3.91
111 112 4.713814 TGACAGAGAGAAGGTGAATAGCAT 59.286 41.667 0.00 0.00 0.00 3.79
112 113 4.089361 TGACAGAGAGAAGGTGAATAGCA 58.911 43.478 0.00 0.00 0.00 3.49
113 114 4.727507 TGACAGAGAGAAGGTGAATAGC 57.272 45.455 0.00 0.00 0.00 2.97
114 115 7.413877 GCAATTTGACAGAGAGAAGGTGAATAG 60.414 40.741 0.00 0.00 0.00 1.73
115 116 6.372659 GCAATTTGACAGAGAGAAGGTGAATA 59.627 38.462 0.00 0.00 0.00 1.75
116 117 5.182760 GCAATTTGACAGAGAGAAGGTGAAT 59.817 40.000 0.00 0.00 0.00 2.57
117 118 4.516698 GCAATTTGACAGAGAGAAGGTGAA 59.483 41.667 0.00 0.00 0.00 3.18
118 119 4.067896 GCAATTTGACAGAGAGAAGGTGA 58.932 43.478 0.00 0.00 0.00 4.02
119 120 3.817084 TGCAATTTGACAGAGAGAAGGTG 59.183 43.478 0.00 0.00 0.00 4.00
120 121 4.090761 TGCAATTTGACAGAGAGAAGGT 57.909 40.909 0.00 0.00 0.00 3.50
121 122 4.698780 TCATGCAATTTGACAGAGAGAAGG 59.301 41.667 0.00 0.00 0.00 3.46
122 123 5.411977 AGTCATGCAATTTGACAGAGAGAAG 59.588 40.000 18.52 0.00 44.73 2.85
123 124 5.311265 AGTCATGCAATTTGACAGAGAGAA 58.689 37.500 18.52 0.00 44.73 2.87
124 125 4.903054 AGTCATGCAATTTGACAGAGAGA 58.097 39.130 18.52 0.00 44.73 3.10
125 126 5.391449 CAAGTCATGCAATTTGACAGAGAG 58.609 41.667 18.52 2.90 44.73 3.20
126 127 5.366829 CAAGTCATGCAATTTGACAGAGA 57.633 39.130 18.52 0.00 44.73 3.10
140 141 2.812591 AGCAGAGACAAAGCAAGTCATG 59.187 45.455 6.08 0.00 38.46 3.07
141 142 3.137446 AGCAGAGACAAAGCAAGTCAT 57.863 42.857 6.08 0.00 38.46 3.06
142 143 2.627515 AGCAGAGACAAAGCAAGTCA 57.372 45.000 6.08 0.00 38.46 3.41
143 144 6.917217 AATATAGCAGAGACAAAGCAAGTC 57.083 37.500 0.00 0.00 36.26 3.01
144 145 7.560368 ACTAATATAGCAGAGACAAAGCAAGT 58.440 34.615 0.00 0.00 0.00 3.16
145 146 7.708322 TGACTAATATAGCAGAGACAAAGCAAG 59.292 37.037 0.00 0.00 0.00 4.01
146 147 7.555965 TGACTAATATAGCAGAGACAAAGCAA 58.444 34.615 0.00 0.00 0.00 3.91
147 148 7.112452 TGACTAATATAGCAGAGACAAAGCA 57.888 36.000 0.00 0.00 0.00 3.91
148 149 7.359933 GCATGACTAATATAGCAGAGACAAAGC 60.360 40.741 0.00 0.00 0.00 3.51
149 150 7.871973 AGCATGACTAATATAGCAGAGACAAAG 59.128 37.037 0.00 0.00 0.00 2.77
150 151 7.730084 AGCATGACTAATATAGCAGAGACAAA 58.270 34.615 0.00 0.00 0.00 2.83
151 152 7.295322 AGCATGACTAATATAGCAGAGACAA 57.705 36.000 0.00 0.00 0.00 3.18
152 153 6.907853 AGCATGACTAATATAGCAGAGACA 57.092 37.500 0.00 0.00 0.00 3.41
153 154 9.868277 ATAAAGCATGACTAATATAGCAGAGAC 57.132 33.333 0.00 0.00 0.00 3.36
165 166 9.692749 CCGAAATACTAGATAAAGCATGACTAA 57.307 33.333 0.00 0.00 0.00 2.24
166 167 8.857098 ACCGAAATACTAGATAAAGCATGACTA 58.143 33.333 0.00 0.00 0.00 2.59
167 168 7.727181 ACCGAAATACTAGATAAAGCATGACT 58.273 34.615 0.00 0.00 0.00 3.41
168 169 7.948278 ACCGAAATACTAGATAAAGCATGAC 57.052 36.000 0.00 0.00 0.00 3.06
203 204 9.581099 GTTGGAAATATGAACAATTTACCGAAT 57.419 29.630 0.00 0.00 0.00 3.34
204 205 8.577296 TGTTGGAAATATGAACAATTTACCGAA 58.423 29.630 0.00 0.00 0.00 4.30
205 206 8.112016 TGTTGGAAATATGAACAATTTACCGA 57.888 30.769 0.00 0.00 0.00 4.69
206 207 7.487829 CCTGTTGGAAATATGAACAATTTACCG 59.512 37.037 0.00 0.00 34.57 4.02
207 208 8.311109 ACCTGTTGGAAATATGAACAATTTACC 58.689 33.333 0.00 0.00 37.04 2.85
210 211 8.865090 TGTACCTGTTGGAAATATGAACAATTT 58.135 29.630 0.00 0.00 37.04 1.82
211 212 8.415950 TGTACCTGTTGGAAATATGAACAATT 57.584 30.769 0.00 0.00 37.04 2.32
212 213 8.303876 GTTGTACCTGTTGGAAATATGAACAAT 58.696 33.333 0.00 0.00 37.04 2.71
213 214 7.285629 TGTTGTACCTGTTGGAAATATGAACAA 59.714 33.333 0.00 0.00 37.04 2.83
214 215 6.773200 TGTTGTACCTGTTGGAAATATGAACA 59.227 34.615 0.00 0.00 37.04 3.18
215 216 7.040686 ACTGTTGTACCTGTTGGAAATATGAAC 60.041 37.037 0.00 0.00 37.04 3.18
216 217 7.001674 ACTGTTGTACCTGTTGGAAATATGAA 58.998 34.615 0.00 0.00 37.04 2.57
217 218 6.429692 CACTGTTGTACCTGTTGGAAATATGA 59.570 38.462 0.00 0.00 37.04 2.15
218 219 6.349280 CCACTGTTGTACCTGTTGGAAATATG 60.349 42.308 0.00 0.00 37.04 1.78
219 220 5.710099 CCACTGTTGTACCTGTTGGAAATAT 59.290 40.000 0.00 0.00 37.04 1.28
220 221 5.067273 CCACTGTTGTACCTGTTGGAAATA 58.933 41.667 0.00 0.00 37.04 1.40
221 222 3.888930 CCACTGTTGTACCTGTTGGAAAT 59.111 43.478 0.00 0.00 37.04 2.17
222 223 3.283751 CCACTGTTGTACCTGTTGGAAA 58.716 45.455 0.00 0.00 37.04 3.13
223 224 2.925724 CCACTGTTGTACCTGTTGGAA 58.074 47.619 0.00 0.00 37.04 3.53
224 225 1.476110 GCCACTGTTGTACCTGTTGGA 60.476 52.381 0.00 0.00 37.04 3.53
225 226 0.951558 GCCACTGTTGTACCTGTTGG 59.048 55.000 0.00 0.00 39.83 3.77
226 227 0.586319 CGCCACTGTTGTACCTGTTG 59.414 55.000 0.00 0.00 0.00 3.33
227 228 0.534203 CCGCCACTGTTGTACCTGTT 60.534 55.000 0.00 0.00 0.00 3.16
228 229 1.070786 CCGCCACTGTTGTACCTGT 59.929 57.895 0.00 0.00 0.00 4.00
229 230 2.325082 GCCGCCACTGTTGTACCTG 61.325 63.158 0.00 0.00 0.00 4.00
230 231 2.032071 GCCGCCACTGTTGTACCT 59.968 61.111 0.00 0.00 0.00 3.08
231 232 3.419759 CGCCGCCACTGTTGTACC 61.420 66.667 0.00 0.00 0.00 3.34
232 233 3.419759 CCGCCGCCACTGTTGTAC 61.420 66.667 0.00 0.00 0.00 2.90
233 234 3.617735 TCCGCCGCCACTGTTGTA 61.618 61.111 0.00 0.00 0.00 2.41
235 236 4.988598 AGTCCGCCGCCACTGTTG 62.989 66.667 0.00 0.00 0.00 3.33
236 237 4.681978 GAGTCCGCCGCCACTGTT 62.682 66.667 0.00 0.00 0.00 3.16
255 256 4.574674 TGTGCTTTGTATCCATTCTCCT 57.425 40.909 0.00 0.00 0.00 3.69
332 334 1.671379 GACTTTGACGACTGGGCCC 60.671 63.158 17.59 17.59 0.00 5.80
338 340 3.131396 GTCACATTGGACTTTGACGACT 58.869 45.455 0.00 0.00 34.92 4.18
342 344 2.489971 TCCGTCACATTGGACTTTGAC 58.510 47.619 0.00 0.00 35.63 3.18
354 356 1.270625 GGAGTTTGGACATCCGTCACA 60.271 52.381 0.00 0.00 44.54 3.58
358 360 1.683441 GGGGAGTTTGGACATCCGT 59.317 57.895 0.00 0.00 39.43 4.69
375 377 1.626825 TCAAACTAGGGGAGGTTTCGG 59.373 52.381 0.00 0.00 30.27 4.30
399 402 4.283722 ACACGTCTGAGAATTCCTAAACCT 59.716 41.667 0.65 0.00 0.00 3.50
407 410 3.304559 CGGATTCACACGTCTGAGAATTC 59.695 47.826 0.00 0.00 37.70 2.17
408 411 3.254060 CGGATTCACACGTCTGAGAATT 58.746 45.455 0.00 0.00 37.70 2.17
412 416 2.065993 AACGGATTCACACGTCTGAG 57.934 50.000 0.00 0.00 43.31 3.35
421 425 8.973378 TCATTAAATTTGTTCAAACGGATTCAC 58.027 29.630 0.00 0.00 0.00 3.18
432 436 5.676532 ACGACGGTCATTAAATTTGTTCA 57.323 34.783 9.10 0.00 0.00 3.18
433 437 6.129300 CCAAACGACGGTCATTAAATTTGTTC 60.129 38.462 9.10 0.00 0.00 3.18
443 447 2.465860 TCATCCAAACGACGGTCATT 57.534 45.000 9.10 0.00 0.00 2.57
483 499 3.730715 CCAAATCGCCTTCAAATATTCGC 59.269 43.478 0.00 0.00 0.00 4.70
503 523 2.107041 AACTCCAACGCGGATCACCA 62.107 55.000 12.47 0.00 45.19 4.17
505 525 1.787847 CAACTCCAACGCGGATCAC 59.212 57.895 12.47 0.00 45.19 3.06
513 2416 0.036306 AGGTAAGGGCAACTCCAACG 59.964 55.000 0.00 0.00 36.21 4.10
533 2436 8.709386 TTGATTAATCTTCTCTCTCGAAAAGG 57.291 34.615 16.24 0.00 0.00 3.11
539 2442 7.922505 ACGATTTGATTAATCTTCTCTCTCG 57.077 36.000 16.24 14.78 40.46 4.04
566 2473 3.281341 TGTAAACTCATTTGCGCCTTG 57.719 42.857 4.18 0.00 33.44 3.61
581 2488 1.003331 CTCCTTTGCGCACGTTGTAAA 60.003 47.619 11.12 0.00 0.00 2.01
623 2530 1.891919 GCAGACACGGACAGGCAAA 60.892 57.895 0.00 0.00 0.00 3.68
647 2554 3.186047 GTCCCGGCGATGTGAACG 61.186 66.667 9.30 0.00 0.00 3.95
656 2563 0.673644 ATTTGACTTCAGTCCCGGCG 60.674 55.000 0.00 0.00 44.15 6.46
697 2605 5.065914 TCACAGGATCTTTTGTCTGGAAAG 58.934 41.667 0.00 0.00 35.85 2.62
774 2682 5.790593 TCTGTAGATGGAAAACAGTGTACC 58.209 41.667 0.00 1.56 41.12 3.34
816 2727 0.530744 GACATCTGGCAGTACACGGA 59.469 55.000 15.27 0.00 0.00 4.69
817 2728 0.246360 TGACATCTGGCAGTACACGG 59.754 55.000 15.27 1.75 0.00 4.94
830 2741 3.681897 AGAAACAAGCACTCGATGACATC 59.318 43.478 5.28 5.28 0.00 3.06
834 2745 3.990469 GAGAAGAAACAAGCACTCGATGA 59.010 43.478 0.00 0.00 0.00 2.92
894 2805 1.071299 AGTGACGCCATTGCTGACA 59.929 52.632 0.00 0.00 34.43 3.58
917 2828 4.216902 TGTGTGAATGGCTCAAGATTCTTG 59.783 41.667 18.49 18.49 35.22 3.02
974 3743 7.062022 TCGTTCGACAATTATGTTCGACAATTA 59.938 33.333 0.00 0.00 40.74 1.40
975 3744 6.013085 CGTTCGACAATTATGTTCGACAATT 58.987 36.000 0.00 0.00 40.74 2.32
977 3746 4.680567 TCGTTCGACAATTATGTTCGACAA 59.319 37.500 0.00 0.00 40.74 3.18
979 3748 4.775083 GCTCGTTCGACAATTATGTTCGAC 60.775 45.833 0.00 0.00 40.74 4.20
980 3749 3.302434 GCTCGTTCGACAATTATGTTCGA 59.698 43.478 0.00 0.00 40.74 3.71
981 3750 3.303495 AGCTCGTTCGACAATTATGTTCG 59.697 43.478 0.00 0.00 40.74 3.95
982 3751 4.326278 TGAGCTCGTTCGACAATTATGTTC 59.674 41.667 9.64 0.00 40.74 3.18
984 3753 3.845178 TGAGCTCGTTCGACAATTATGT 58.155 40.909 9.64 0.00 44.25 2.29
985 3754 4.780324 GCTTGAGCTCGTTCGACAATTATG 60.780 45.833 9.64 0.00 38.21 1.90
986 3755 3.307242 GCTTGAGCTCGTTCGACAATTAT 59.693 43.478 9.64 0.00 38.21 1.28
1034 3825 0.242825 TCTACACTGCAGCCACGTAC 59.757 55.000 15.27 0.00 0.00 3.67
1035 3826 0.526211 CTCTACACTGCAGCCACGTA 59.474 55.000 15.27 9.45 0.00 3.57
1036 3827 1.179174 TCTCTACACTGCAGCCACGT 61.179 55.000 15.27 8.74 0.00 4.49
1050 3841 1.682394 GGGTGAGCTCTTCCGTCTCTA 60.682 57.143 16.19 0.00 0.00 2.43
1078 3876 4.522789 ACTGAAAGGAGATAGCTAGCTAGC 59.477 45.833 33.96 33.96 44.42 3.42
1079 3877 5.106712 CGACTGAAAGGAGATAGCTAGCTAG 60.107 48.000 27.42 16.84 39.30 3.42
1080 3878 4.757657 CGACTGAAAGGAGATAGCTAGCTA 59.242 45.833 26.09 26.09 39.30 3.32
1081 3879 3.568007 CGACTGAAAGGAGATAGCTAGCT 59.432 47.826 23.12 23.12 39.30 3.32
1336 4134 0.946221 CAAGCTAGATAAGGCGCCCG 60.946 60.000 26.15 3.99 0.00 6.13
1338 4136 1.503294 GTCAAGCTAGATAAGGCGCC 58.497 55.000 21.89 21.89 0.00 6.53
1345 4151 1.657487 GCGCGCGTCAAGCTAGATA 60.657 57.895 32.35 0.00 45.59 1.98
1375 4181 2.261361 CAGTCGATGCACCGGTGA 59.739 61.111 38.30 22.50 0.00 4.02
1471 4277 0.041833 CCTTGGTCCTCTCCTCCTCA 59.958 60.000 0.00 0.00 0.00 3.86
1526 4332 4.604976 GCATCCAAATCACACAGATTAGC 58.395 43.478 0.00 0.00 46.09 3.09
1533 4339 0.957362 TTGCGCATCCAAATCACACA 59.043 45.000 12.75 0.00 0.00 3.72
1608 4414 9.725019 AAAATGTACAGAGATAACATGAACTCA 57.275 29.630 0.00 0.00 34.20 3.41
1837 4643 9.923143 TCACGTATATAGGAAATGATTAACCAG 57.077 33.333 9.36 0.00 0.00 4.00
1970 4781 7.013083 AGACTTCATAGATTGCTTGGCATTTAG 59.987 37.037 0.00 0.00 38.76 1.85
1985 4796 1.754555 GCCGAGGGGAGACTTCATAGA 60.755 57.143 0.00 0.00 34.06 1.98
2008 4820 7.695480 TTTAACAGAAACATATGCAGCCTTA 57.305 32.000 1.58 0.00 0.00 2.69
2011 4823 7.832503 AATTTTAACAGAAACATATGCAGCC 57.167 32.000 1.58 0.00 0.00 4.85
2045 4858 7.452501 TGGTACAGAGGTAGTATTACTTTGTGT 59.547 37.037 0.85 6.27 31.35 3.72
2081 4895 6.852345 CAGTTTAAATTGAACTGCCAAAATGC 59.148 34.615 15.89 0.00 45.02 3.56
2130 4944 4.947388 GCAAATTGGTCAATACTACCTCCA 59.053 41.667 0.00 0.00 37.91 3.86
2136 4950 7.822161 ATGCTATGCAAATTGGTCAATACTA 57.178 32.000 0.00 0.00 43.62 1.82
2145 4962 4.496360 TGTCACAATGCTATGCAAATTGG 58.504 39.130 15.09 7.67 43.62 3.16
2281 5100 7.578189 CGGGGAAAAACAGAGTACTATAACAGA 60.578 40.741 0.00 0.00 0.00 3.41
2463 5302 3.006110 AGGTCCACAAATGCACAAATGAG 59.994 43.478 0.00 0.00 0.00 2.90
2902 5885 6.096846 CCATAAACTTCTCCATAACAAAGGGG 59.903 42.308 0.00 0.00 0.00 4.79
2986 5985 0.323451 AATTTTGGGACGGAGGGAGC 60.323 55.000 0.00 0.00 0.00 4.70
2987 5986 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2990 5989 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2991 5990 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2994 5993 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2995 5994 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
3004 6003 9.569167 CGTATGTAGACAAATCTAAGACAAGAA 57.431 33.333 0.00 0.00 39.20 2.52
3005 6004 8.188799 CCGTATGTAGACAAATCTAAGACAAGA 58.811 37.037 0.00 0.00 39.20 3.02
3006 6005 8.188799 TCCGTATGTAGACAAATCTAAGACAAG 58.811 37.037 0.00 0.00 39.20 3.16
3007 6006 8.058667 TCCGTATGTAGACAAATCTAAGACAA 57.941 34.615 0.00 0.00 39.20 3.18
3008 6007 7.634671 TCCGTATGTAGACAAATCTAAGACA 57.365 36.000 0.00 0.00 39.20 3.41
3009 6008 8.136165 ACATCCGTATGTAGACAAATCTAAGAC 58.864 37.037 0.00 0.00 44.66 3.01
3010 6009 8.234136 ACATCCGTATGTAGACAAATCTAAGA 57.766 34.615 0.00 0.00 44.66 2.10
3025 6024 7.869016 AAACGTGAATAGATACATCCGTATG 57.131 36.000 0.00 0.00 38.48 2.39
3026 6025 9.622004 CTAAAACGTGAATAGATACATCCGTAT 57.378 33.333 0.00 0.00 41.16 3.06
3027 6026 8.623903 ACTAAAACGTGAATAGATACATCCGTA 58.376 33.333 8.90 0.00 0.00 4.02
3028 6027 7.434307 CACTAAAACGTGAATAGATACATCCGT 59.566 37.037 8.90 0.00 37.06 4.69
3029 6028 7.434307 ACACTAAAACGTGAATAGATACATCCG 59.566 37.037 8.90 0.00 38.27 4.18
3030 6029 8.644318 ACACTAAAACGTGAATAGATACATCC 57.356 34.615 8.90 0.00 38.27 3.51
3033 6032 9.079833 GCTAACACTAAAACGTGAATAGATACA 57.920 33.333 8.90 0.00 38.27 2.29
3034 6033 9.298774 AGCTAACACTAAAACGTGAATAGATAC 57.701 33.333 8.90 0.00 38.27 2.24
3036 6035 9.298774 GTAGCTAACACTAAAACGTGAATAGAT 57.701 33.333 0.00 0.00 38.27 1.98
3037 6036 8.298854 TGTAGCTAACACTAAAACGTGAATAGA 58.701 33.333 0.00 0.00 38.27 1.98
3038 6037 8.456904 TGTAGCTAACACTAAAACGTGAATAG 57.543 34.615 0.00 0.00 38.27 1.73
3039 6038 8.991243 ATGTAGCTAACACTAAAACGTGAATA 57.009 30.769 0.00 0.00 42.09 1.75
3040 6039 7.064253 GGATGTAGCTAACACTAAAACGTGAAT 59.936 37.037 0.00 0.00 42.09 2.57
3041 6040 6.366877 GGATGTAGCTAACACTAAAACGTGAA 59.633 38.462 0.00 0.00 42.09 3.18
3042 6041 5.865552 GGATGTAGCTAACACTAAAACGTGA 59.134 40.000 0.00 0.00 42.09 4.35
3043 6042 5.220154 CGGATGTAGCTAACACTAAAACGTG 60.220 44.000 0.00 0.00 42.09 4.49
3044 6043 4.860907 CGGATGTAGCTAACACTAAAACGT 59.139 41.667 0.00 0.00 42.09 3.99
3045 6044 4.860907 ACGGATGTAGCTAACACTAAAACG 59.139 41.667 0.00 0.00 42.09 3.60
3046 6045 7.919621 AGATACGGATGTAGCTAACACTAAAAC 59.080 37.037 0.00 0.00 45.09 2.43
3047 6046 8.004087 AGATACGGATGTAGCTAACACTAAAA 57.996 34.615 0.00 0.00 45.09 1.52
3048 6047 7.578310 AGATACGGATGTAGCTAACACTAAA 57.422 36.000 0.00 0.00 45.09 1.85
3049 6048 8.152898 TCTAGATACGGATGTAGCTAACACTAA 58.847 37.037 6.94 0.00 45.92 2.24
3050 6049 7.674120 TCTAGATACGGATGTAGCTAACACTA 58.326 38.462 6.94 0.00 45.92 2.74
3051 6050 6.531923 TCTAGATACGGATGTAGCTAACACT 58.468 40.000 6.94 0.00 45.92 3.55
3052 6051 6.798315 TCTAGATACGGATGTAGCTAACAC 57.202 41.667 6.94 0.00 45.92 3.32
3053 6052 9.511272 TTTATCTAGATACGGATGTAGCTAACA 57.489 33.333 12.12 0.00 45.92 2.41
3076 6075 8.726988 CGTCCCAAAATTCTTGTCTTAGATTTA 58.273 33.333 0.00 0.00 0.00 1.40
3077 6076 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
3078 6077 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
3079 6078 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
3080 6079 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
3081 6080 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
3082 6081 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
3083 6082 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
3084 6083 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
3085 6084 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
3086 6085 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
3087 6086 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
3088 6087 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
3089 6088 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
3090 6089 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
3091 6090 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
3092 6091 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
3093 6092 1.557832 CATACTCCCTCCGTCCCAAAA 59.442 52.381 0.00 0.00 0.00 2.44
3094 6093 1.200519 CATACTCCCTCCGTCCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
3095 6094 0.337082 TCATACTCCCTCCGTCCCAA 59.663 55.000 0.00 0.00 0.00 4.12
3096 6095 0.106167 CTCATACTCCCTCCGTCCCA 60.106 60.000 0.00 0.00 0.00 4.37
3097 6096 0.185416 TCTCATACTCCCTCCGTCCC 59.815 60.000 0.00 0.00 0.00 4.46
3098 6097 2.296073 ATCTCATACTCCCTCCGTCC 57.704 55.000 0.00 0.00 0.00 4.79
3099 6098 5.010933 TGATAATCTCATACTCCCTCCGTC 58.989 45.833 0.00 0.00 0.00 4.79
3100 6099 4.999310 TGATAATCTCATACTCCCTCCGT 58.001 43.478 0.00 0.00 0.00 4.69
3101 6100 5.984695 TTGATAATCTCATACTCCCTCCG 57.015 43.478 0.00 0.00 32.72 4.63
3102 6101 6.126911 GGGATTGATAATCTCATACTCCCTCC 60.127 46.154 0.00 0.00 40.74 4.30
3103 6102 6.441924 TGGGATTGATAATCTCATACTCCCTC 59.558 42.308 14.21 0.00 43.27 4.30
3104 6103 6.334296 TGGGATTGATAATCTCATACTCCCT 58.666 40.000 14.21 0.00 43.27 4.20
3105 6104 6.627087 TGGGATTGATAATCTCATACTCCC 57.373 41.667 0.15 0.00 43.27 4.30
3113 6112 5.486775 TGGAGAGGATGGGATTGATAATCTC 59.513 44.000 2.03 0.00 38.91 2.75
3124 6123 3.260205 AGAAAAACTGGAGAGGATGGGA 58.740 45.455 0.00 0.00 0.00 4.37
3175 6174 5.165961 TCCACCTTGTCTATCCAAAGAAG 57.834 43.478 0.00 0.00 0.00 2.85
3193 6192 4.717877 TGACATCATTACCATCCATCCAC 58.282 43.478 0.00 0.00 0.00 4.02
3270 6275 6.341316 TGAGTGAATCTTACCTTAGATGTGC 58.659 40.000 0.00 0.00 35.12 4.57
3307 6312 5.124776 CCGAGCCCTACATAAAATGTTTTCA 59.875 40.000 0.00 0.00 41.63 2.69
3308 6313 5.124936 ACCGAGCCCTACATAAAATGTTTTC 59.875 40.000 0.00 0.00 41.63 2.29
3309 6314 5.014202 ACCGAGCCCTACATAAAATGTTTT 58.986 37.500 0.00 0.00 41.63 2.43
3310 6315 4.595986 ACCGAGCCCTACATAAAATGTTT 58.404 39.130 0.00 0.00 41.63 2.83
3311 6316 4.080526 AGACCGAGCCCTACATAAAATGTT 60.081 41.667 0.00 0.00 41.63 2.71
3312 6317 3.454812 AGACCGAGCCCTACATAAAATGT 59.545 43.478 0.00 0.00 46.92 2.71
3363 6368 2.162716 GACATGGTCGCCAGTGAAC 58.837 57.895 0.00 0.00 36.75 3.18
3480 6489 9.113838 GTACAGTTGAATATTGGTCTTCATCAT 57.886 33.333 0.00 0.00 31.83 2.45
3580 6613 7.661847 CACTCAAAATCTAGGTCCAGTAACTTT 59.338 37.037 0.00 0.00 0.00 2.66
3657 6710 3.287222 GTGGCTTGCAAATCCAGGTATA 58.713 45.455 17.54 0.00 43.76 1.47
3700 6753 6.861065 TTAGTTCAAGTTACAGAAAGGCAG 57.139 37.500 0.00 0.00 0.00 4.85
3851 6910 7.287696 TCCCTTTATTCTGGAATCCTTATTTGC 59.712 37.037 0.00 0.00 32.50 3.68
3898 6957 5.172205 TCGATCATTATTTCGTTGGACACA 58.828 37.500 0.00 0.00 36.74 3.72
3975 7034 1.851304 ACCCATGCCTTGTACATTGG 58.149 50.000 10.15 10.15 36.60 3.16
3977 7036 3.463329 AGGATACCCATGCCTTGTACATT 59.537 43.478 0.00 0.00 33.88 2.71
4049 7111 9.793252 AATGATTGTACAATCTGCTGAAATAAC 57.207 29.630 36.15 15.90 45.55 1.89
4051 7113 9.176460 TGAATGATTGTACAATCTGCTGAAATA 57.824 29.630 36.15 20.64 45.55 1.40
4052 7114 8.058667 TGAATGATTGTACAATCTGCTGAAAT 57.941 30.769 36.15 22.78 45.55 2.17
4055 7117 6.175471 ACTGAATGATTGTACAATCTGCTGA 58.825 36.000 36.15 22.97 45.55 4.26
4102 7173 5.698832 CAATCATCACGAAGGTTTTGCTAA 58.301 37.500 0.00 0.00 0.00 3.09
4109 7180 4.037923 ACAAAAGCAATCATCACGAAGGTT 59.962 37.500 0.00 0.00 0.00 3.50
4115 7186 5.666913 GCAATGAACAAAAGCAATCATCACG 60.667 40.000 0.00 0.00 31.58 4.35
4121 7192 6.051646 ACAAAGCAATGAACAAAAGCAATC 57.948 33.333 0.00 0.00 0.00 2.67
4122 7193 5.585445 TGACAAAGCAATGAACAAAAGCAAT 59.415 32.000 0.00 0.00 0.00 3.56
4123 7194 4.934001 TGACAAAGCAATGAACAAAAGCAA 59.066 33.333 0.00 0.00 0.00 3.91
4124 7195 4.502016 TGACAAAGCAATGAACAAAAGCA 58.498 34.783 0.00 0.00 0.00 3.91
4125 7196 5.662211 ATGACAAAGCAATGAACAAAAGC 57.338 34.783 0.00 0.00 0.00 3.51
4126 7197 6.925165 ACCTATGACAAAGCAATGAACAAAAG 59.075 34.615 0.00 0.00 0.00 2.27
4127 7198 6.815089 ACCTATGACAAAGCAATGAACAAAA 58.185 32.000 0.00 0.00 0.00 2.44
4128 7199 6.403866 ACCTATGACAAAGCAATGAACAAA 57.596 33.333 0.00 0.00 0.00 2.83
4129 7200 6.215121 CAACCTATGACAAAGCAATGAACAA 58.785 36.000 0.00 0.00 0.00 2.83
4130 7201 5.771469 CAACCTATGACAAAGCAATGAACA 58.229 37.500 0.00 0.00 0.00 3.18
4131 7202 4.622740 GCAACCTATGACAAAGCAATGAAC 59.377 41.667 0.00 0.00 0.00 3.18
4132 7203 4.321899 GGCAACCTATGACAAAGCAATGAA 60.322 41.667 0.00 0.00 36.87 2.57
4133 7204 3.193267 GGCAACCTATGACAAAGCAATGA 59.807 43.478 0.00 0.00 36.87 2.57
4134 7205 3.194116 AGGCAACCTATGACAAAGCAATG 59.806 43.478 0.00 0.00 40.75 2.82
4135 7206 3.434309 AGGCAACCTATGACAAAGCAAT 58.566 40.909 0.00 0.00 40.75 3.56
4136 7207 2.875296 AGGCAACCTATGACAAAGCAA 58.125 42.857 0.00 0.00 40.75 3.91
4137 7208 2.584835 AGGCAACCTATGACAAAGCA 57.415 45.000 0.00 0.00 40.75 3.91
4138 7209 3.942130 AAAGGCAACCTATGACAAAGC 57.058 42.857 0.00 0.00 40.75 3.51
4139 7210 4.280677 TGGAAAAGGCAACCTATGACAAAG 59.719 41.667 0.00 0.00 40.75 2.77
4140 7211 4.038642 GTGGAAAAGGCAACCTATGACAAA 59.961 41.667 0.00 0.00 40.75 2.83
4141 7212 3.572255 GTGGAAAAGGCAACCTATGACAA 59.428 43.478 0.00 0.00 40.75 3.18
4142 7213 3.153919 GTGGAAAAGGCAACCTATGACA 58.846 45.455 0.00 0.00 40.75 3.58
4143 7214 3.153919 TGTGGAAAAGGCAACCTATGAC 58.846 45.455 0.00 0.00 37.30 3.06
4144 7215 3.517296 TGTGGAAAAGGCAACCTATGA 57.483 42.857 0.00 0.00 31.13 2.15
4145 7216 4.599047 TTTGTGGAAAAGGCAACCTATG 57.401 40.909 0.00 0.00 31.13 2.23
4146 7217 4.407296 TGTTTTGTGGAAAAGGCAACCTAT 59.593 37.500 0.00 0.00 31.57 2.57
4147 7218 3.769844 TGTTTTGTGGAAAAGGCAACCTA 59.230 39.130 0.00 0.00 31.57 3.08
4148 7219 2.569404 TGTTTTGTGGAAAAGGCAACCT 59.431 40.909 0.00 0.00 31.57 3.50
4149 7220 2.979240 TGTTTTGTGGAAAAGGCAACC 58.021 42.857 0.00 0.00 31.57 3.77
4150 7221 6.536941 TCTTATTGTTTTGTGGAAAAGGCAAC 59.463 34.615 0.00 0.00 31.57 4.17
4151 7222 6.644347 TCTTATTGTTTTGTGGAAAAGGCAA 58.356 32.000 0.00 0.00 31.57 4.52
4152 7223 6.227298 TCTTATTGTTTTGTGGAAAAGGCA 57.773 33.333 0.00 0.00 31.57 4.75
4153 7224 7.728847 ATTCTTATTGTTTTGTGGAAAAGGC 57.271 32.000 0.00 0.00 31.57 4.35
4212 7284 1.047596 ATCGTCCAGATGCAGAGGCT 61.048 55.000 0.00 0.00 41.91 4.58
4274 7350 3.670625 GGTGGCTTACTGTTGTATCACA 58.329 45.455 0.00 0.00 31.96 3.58
4334 7420 2.288702 CCAGACTATCAGCATCCCTTCG 60.289 54.545 0.00 0.00 0.00 3.79
4441 7541 4.681978 GGTTGAGGAGCACGCCGT 62.682 66.667 0.00 0.00 0.00 5.68
4500 7601 6.169094 CAGTACAACTCTGAAGATGGATTGT 58.831 40.000 0.00 0.00 35.20 2.71
4538 7639 3.461773 GCAGCAGCTAGACCGGGA 61.462 66.667 6.32 0.00 37.91 5.14
4560 7661 2.347490 GTCTGGCATCGTGGTGGT 59.653 61.111 0.00 0.00 0.00 4.16
4822 7923 0.032952 TCGAGGTGAAACTCCCAACG 59.967 55.000 0.00 0.00 36.74 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.