Multiple sequence alignment - TraesCS2B01G146000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G146000 chr2B 100.000 2709 0 0 1 2709 111670403 111667695 0.000000e+00 5003.0
1 TraesCS2B01G146000 chr2D 92.018 1328 66 15 435 1756 73820634 73819341 0.000000e+00 1829.0
2 TraesCS2B01G146000 chr2D 87.560 1037 70 35 696 1703 73592448 73591442 0.000000e+00 1146.0
3 TraesCS2B01G146000 chr2D 85.791 1112 105 35 720 1813 323517318 323516242 0.000000e+00 1129.0
4 TraesCS2B01G146000 chr2D 88.936 714 71 6 996 1703 323561366 323562077 0.000000e+00 874.0
5 TraesCS2B01G146000 chr2D 83.406 458 54 17 2 449 73821093 73820648 3.250000e-109 405.0
6 TraesCS2B01G146000 chr2D 88.679 265 28 2 2396 2658 443734846 443735110 3.360000e-84 322.0
7 TraesCS2B01G146000 chr2D 78.036 387 51 21 1889 2265 73595686 73595324 2.110000e-51 213.0
8 TraesCS2B01G146000 chr2A 91.389 871 42 16 855 1703 73183544 73182685 0.000000e+00 1162.0
9 TraesCS2B01G146000 chr2A 87.402 1024 82 30 696 1703 73180105 73179113 0.000000e+00 1133.0
10 TraesCS2B01G146000 chr2A 84.891 1145 113 38 649 1770 406996609 406997716 0.000000e+00 1101.0
11 TraesCS2B01G146000 chr2A 84.716 1145 113 39 649 1770 407125108 407126213 0.000000e+00 1088.0
12 TraesCS2B01G146000 chr2A 82.835 635 51 23 212 840 73184193 73183611 1.440000e-142 516.0
13 TraesCS2B01G146000 chr4D 88.842 717 65 12 993 1703 354036691 354037398 0.000000e+00 867.0
14 TraesCS2B01G146000 chr4D 94.498 309 16 1 2402 2709 140809375 140809683 2.440000e-130 475.0
15 TraesCS2B01G146000 chr6D 94.156 308 18 0 2402 2709 452844782 452845089 1.140000e-128 470.0
16 TraesCS2B01G146000 chr5D 90.196 51 5 0 189 239 547273128 547273178 1.740000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G146000 chr2B 111667695 111670403 2708 True 5003.0 5003 100.000000 1 2709 1 chr2B.!!$R1 2708
1 TraesCS2B01G146000 chr2D 323516242 323517318 1076 True 1129.0 1129 85.791000 720 1813 1 chr2D.!!$R1 1093
2 TraesCS2B01G146000 chr2D 73819341 73821093 1752 True 1117.0 1829 87.712000 2 1756 2 chr2D.!!$R3 1754
3 TraesCS2B01G146000 chr2D 323561366 323562077 711 False 874.0 874 88.936000 996 1703 1 chr2D.!!$F1 707
4 TraesCS2B01G146000 chr2D 73591442 73595686 4244 True 679.5 1146 82.798000 696 2265 2 chr2D.!!$R2 1569
5 TraesCS2B01G146000 chr2A 406996609 406997716 1107 False 1101.0 1101 84.891000 649 1770 1 chr2A.!!$F1 1121
6 TraesCS2B01G146000 chr2A 407125108 407126213 1105 False 1088.0 1088 84.716000 649 1770 1 chr2A.!!$F2 1121
7 TraesCS2B01G146000 chr2A 73179113 73184193 5080 True 937.0 1162 87.208667 212 1703 3 chr2A.!!$R1 1491
8 TraesCS2B01G146000 chr4D 354036691 354037398 707 False 867.0 867 88.842000 993 1703 1 chr4D.!!$F2 710

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
695 736 0.031178 CGTAGTATACCCCACGCCAC 59.969 60.0 0.0 0.0 38.71 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2051 6721 0.033781 CCCACACATTGTTGCCCTTG 59.966 55.0 0.0 0.0 0.0 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 2.833957 GGGACTCCCCGTGTTTGT 59.166 61.111 2.04 0.00 44.02 2.83
48 49 0.395312 TCCCCGTGTTTGTTCTCCTC 59.605 55.000 0.00 0.00 0.00 3.71
56 57 1.192534 GTTTGTTCTCCTCGTTCAGCG 59.807 52.381 0.00 0.00 43.01 5.18
68 69 1.745115 TTCAGCGGCAAGGGAATCG 60.745 57.895 1.45 0.00 0.00 3.34
70 71 1.524621 CAGCGGCAAGGGAATCGAT 60.525 57.895 1.45 0.00 0.00 3.59
86 87 1.035932 CGATACCCACGACCTCACCT 61.036 60.000 0.00 0.00 0.00 4.00
96 97 0.531200 GACCTCACCTTGTAGGGACG 59.469 60.000 0.00 0.00 40.58 4.79
97 98 0.113776 ACCTCACCTTGTAGGGACGA 59.886 55.000 0.00 0.00 40.58 4.20
98 99 1.273098 ACCTCACCTTGTAGGGACGAT 60.273 52.381 0.00 0.00 40.58 3.73
100 101 2.159085 CCTCACCTTGTAGGGACGATTC 60.159 54.545 0.00 0.00 40.58 2.52
101 102 2.496070 CTCACCTTGTAGGGACGATTCA 59.504 50.000 0.00 0.00 40.58 2.57
102 103 2.496070 TCACCTTGTAGGGACGATTCAG 59.504 50.000 0.00 0.00 40.58 3.02
104 105 1.139058 CCTTGTAGGGACGATTCAGGG 59.861 57.143 0.00 0.00 0.00 4.45
127 130 3.688185 GGGACGAGACCCTAACAATTTTC 59.312 47.826 3.41 0.00 45.90 2.29
129 132 4.630505 GGACGAGACCCTAACAATTTTCTC 59.369 45.833 0.00 0.00 0.00 2.87
139 142 7.282450 ACCCTAACAATTTTCTCCTTAATAGCG 59.718 37.037 0.00 0.00 0.00 4.26
159 162 5.523013 GCGATTCAGGATTGCTATAAGTC 57.477 43.478 0.00 0.00 41.25 3.01
161 164 5.119898 GCGATTCAGGATTGCTATAAGTCAG 59.880 44.000 0.00 0.00 41.25 3.51
162 165 6.219473 CGATTCAGGATTGCTATAAGTCAGT 58.781 40.000 0.00 0.00 0.00 3.41
163 166 6.145209 CGATTCAGGATTGCTATAAGTCAGTG 59.855 42.308 0.00 0.00 0.00 3.66
164 167 5.282055 TCAGGATTGCTATAAGTCAGTGG 57.718 43.478 0.00 0.00 0.00 4.00
166 169 5.053145 CAGGATTGCTATAAGTCAGTGGAC 58.947 45.833 0.00 0.00 44.66 4.02
230 238 8.786826 AGATTTTATGTGAAGATCCGTGTAAA 57.213 30.769 0.00 0.00 0.00 2.01
235 243 9.834628 TTTATGTGAAGATCCGTGTAAATTTTC 57.165 29.630 0.00 0.00 0.00 2.29
381 390 7.097834 GGAGGATCATTTATAGAGTTAACGGG 58.902 42.308 0.00 0.00 36.25 5.28
395 404 3.751246 CGGGCATTGCACAGGTGG 61.751 66.667 12.14 0.00 0.00 4.61
403 412 2.969821 TTGCACAGGTGGAGGTTTAT 57.030 45.000 1.10 0.00 31.08 1.40
404 413 4.269183 CATTGCACAGGTGGAGGTTTATA 58.731 43.478 1.10 0.00 31.08 0.98
411 420 2.772515 AGGTGGAGGTTTATAGGACTGC 59.227 50.000 0.00 0.00 0.00 4.40
430 439 7.123697 AGGACTGCAAATAAGTAAAATTACCCC 59.876 37.037 0.00 0.00 34.19 4.95
433 442 6.937392 TGCAAATAAGTAAAATTACCCCCAC 58.063 36.000 0.00 0.00 34.19 4.61
469 504 5.584551 ATCTGAGGGGTTTGAAGTTAGTT 57.415 39.130 0.00 0.00 0.00 2.24
504 539 7.944061 TGAAAATGCATATAATCCTTGTCTGG 58.056 34.615 0.00 0.00 0.00 3.86
505 540 5.972107 AATGCATATAATCCTTGTCTGGC 57.028 39.130 0.00 0.00 0.00 4.85
508 543 4.763279 TGCATATAATCCTTGTCTGGCATG 59.237 41.667 0.00 0.00 0.00 4.06
651 688 6.134730 GGCGATACATATCTACATACGTAGC 58.865 44.000 0.08 0.00 44.17 3.58
694 735 0.395586 ACGTAGTATACCCCACGCCA 60.396 55.000 17.37 0.00 41.94 5.69
695 736 0.031178 CGTAGTATACCCCACGCCAC 59.969 60.000 0.00 0.00 38.71 5.01
709 3252 1.078759 CGCCACGTTCATCAGAGTCC 61.079 60.000 0.00 0.00 0.00 3.85
751 3306 4.051922 CACTACACAAGGTGACAAGACTC 58.948 47.826 2.98 0.00 36.96 3.36
782 3339 1.005748 GGCGATGATCGGATCAGCA 60.006 57.895 29.19 8.44 45.51 4.41
907 3528 4.416738 AGCCTGCCCGCCTTCTTC 62.417 66.667 0.00 0.00 0.00 2.87
966 3597 5.467735 AGCAATTTCCAAAGCAAATCAGTTC 59.532 36.000 0.00 0.00 0.00 3.01
987 3618 2.455674 ACGTGCACAGCAGAATTCTA 57.544 45.000 18.64 0.00 40.08 2.10
1709 4376 1.153939 CTCAAGGCCGTCGTCTGAG 60.154 63.158 0.00 0.36 0.00 3.35
1718 4385 1.287191 GTCGTCTGAGCTGCTCACA 59.713 57.895 27.35 15.93 35.39 3.58
1759 4426 2.028420 ACATCGTGTGTGGATGGATG 57.972 50.000 6.71 0.00 44.34 3.51
1760 4427 1.554617 ACATCGTGTGTGGATGGATGA 59.445 47.619 6.35 0.00 44.34 2.92
1761 4428 2.171237 ACATCGTGTGTGGATGGATGAT 59.829 45.455 6.35 0.00 44.34 2.45
1762 4429 3.208594 CATCGTGTGTGGATGGATGATT 58.791 45.455 0.00 0.00 38.07 2.57
1763 4430 3.348647 TCGTGTGTGGATGGATGATTT 57.651 42.857 0.00 0.00 0.00 2.17
1764 4431 3.270027 TCGTGTGTGGATGGATGATTTC 58.730 45.455 0.00 0.00 0.00 2.17
1783 4450 6.375736 TGATTTCCGGTTTATTAGCATGTCAA 59.624 34.615 0.00 0.00 0.00 3.18
1805 4481 9.255304 GTCAACTGGAGCAAAATTTGTTTATTA 57.745 29.630 7.60 0.00 0.00 0.98
1806 4482 9.474920 TCAACTGGAGCAAAATTTGTTTATTAG 57.525 29.630 7.60 2.22 0.00 1.73
1808 4484 7.441017 ACTGGAGCAAAATTTGTTTATTAGCA 58.559 30.769 7.60 0.00 0.00 3.49
1810 4486 8.845413 TGGAGCAAAATTTGTTTATTAGCAAT 57.155 26.923 7.60 0.00 0.00 3.56
1811 4487 9.282569 TGGAGCAAAATTTGTTTATTAGCAATT 57.717 25.926 7.60 0.00 0.00 2.32
1828 4504 5.909477 AGCAATTATTACTACACCGTGCTA 58.091 37.500 0.00 0.00 38.00 3.49
1829 4505 6.522054 AGCAATTATTACTACACCGTGCTAT 58.478 36.000 0.00 0.00 38.00 2.97
1830 4506 7.663827 AGCAATTATTACTACACCGTGCTATA 58.336 34.615 0.00 0.00 38.00 1.31
1831 4507 7.813148 AGCAATTATTACTACACCGTGCTATAG 59.187 37.037 0.00 0.00 38.00 1.31
1833 4509 9.472361 CAATTATTACTACACCGTGCTATAGTT 57.528 33.333 0.84 0.00 0.00 2.24
1835 4511 9.688592 ATTATTACTACACCGTGCTATAGTTTC 57.311 33.333 0.84 0.00 0.00 2.78
1836 4512 6.764308 TTACTACACCGTGCTATAGTTTCT 57.236 37.500 0.84 0.00 0.00 2.52
1837 4513 7.864108 TTACTACACCGTGCTATAGTTTCTA 57.136 36.000 0.84 0.00 0.00 2.10
1838 4514 6.764308 ACTACACCGTGCTATAGTTTCTAA 57.236 37.500 0.84 0.00 0.00 2.10
1839 4515 7.344095 ACTACACCGTGCTATAGTTTCTAAT 57.656 36.000 0.84 0.00 0.00 1.73
1840 4516 8.455903 ACTACACCGTGCTATAGTTTCTAATA 57.544 34.615 0.84 0.00 0.00 0.98
1841 4517 8.566260 ACTACACCGTGCTATAGTTTCTAATAG 58.434 37.037 0.84 0.40 0.00 1.73
1872 4548 9.665719 TCTTTTTGGGAAAGAAATAATAATGGC 57.334 29.630 0.00 0.00 33.72 4.40
1874 4550 7.411486 TTTGGGAAAGAAATAATAATGGCGA 57.589 32.000 0.00 0.00 0.00 5.54
1875 4551 6.385649 TGGGAAAGAAATAATAATGGCGAC 57.614 37.500 0.00 0.00 0.00 5.19
1890 6560 3.081061 TGGCGACACTTATGCTCAAAAT 58.919 40.909 0.00 0.00 33.40 1.82
1902 6572 5.859205 ATGCTCAAAATATGGTTTCTCCC 57.141 39.130 0.00 0.00 34.77 4.30
1923 6593 3.065575 CGGTGCGGATTTAGCTCTT 57.934 52.632 0.00 0.00 35.28 2.85
1928 6598 0.107165 GCGGATTTAGCTCTTGGGGT 60.107 55.000 0.00 0.00 0.00 4.95
1929 6599 1.682087 GCGGATTTAGCTCTTGGGGTT 60.682 52.381 0.00 0.00 0.00 4.11
1930 6600 2.017049 CGGATTTAGCTCTTGGGGTTG 58.983 52.381 0.00 0.00 0.00 3.77
1931 6601 2.355716 CGGATTTAGCTCTTGGGGTTGA 60.356 50.000 0.00 0.00 0.00 3.18
1932 6602 3.697166 GGATTTAGCTCTTGGGGTTGAA 58.303 45.455 0.00 0.00 0.00 2.69
1933 6603 3.444034 GGATTTAGCTCTTGGGGTTGAAC 59.556 47.826 0.00 0.00 0.00 3.18
1934 6604 2.579410 TTAGCTCTTGGGGTTGAACC 57.421 50.000 5.62 5.62 37.60 3.62
1936 6606 1.742308 AGCTCTTGGGGTTGAACCTA 58.258 50.000 14.87 0.85 38.64 3.08
1938 6608 2.445525 AGCTCTTGGGGTTGAACCTAAA 59.554 45.455 14.87 8.05 38.64 1.85
1939 6609 3.117284 AGCTCTTGGGGTTGAACCTAAAA 60.117 43.478 14.87 5.63 38.64 1.52
1940 6610 3.005472 GCTCTTGGGGTTGAACCTAAAAC 59.995 47.826 14.87 0.00 38.64 2.43
1941 6611 4.470602 CTCTTGGGGTTGAACCTAAAACT 58.529 43.478 14.87 0.00 38.64 2.66
1942 6612 4.211920 TCTTGGGGTTGAACCTAAAACTG 58.788 43.478 14.87 0.00 38.64 3.16
1943 6613 3.955524 TGGGGTTGAACCTAAAACTGA 57.044 42.857 14.87 0.00 38.64 3.41
1944 6614 3.827722 TGGGGTTGAACCTAAAACTGAG 58.172 45.455 14.87 0.00 38.64 3.35
1952 6622 3.503800 ACCTAAAACTGAGGTCAACCC 57.496 47.619 0.00 0.00 44.33 4.11
1961 6631 2.464582 AGGTCAACCCTCACTTCCC 58.535 57.895 0.00 0.00 40.71 3.97
1962 6632 1.134438 AGGTCAACCCTCACTTCCCC 61.134 60.000 0.00 0.00 40.71 4.81
1963 6633 1.423794 GGTCAACCCTCACTTCCCCA 61.424 60.000 0.00 0.00 0.00 4.96
1965 6635 1.303643 CAACCCTCACTTCCCCAGC 60.304 63.158 0.00 0.00 0.00 4.85
1966 6636 2.895424 AACCCTCACTTCCCCAGCG 61.895 63.158 0.00 0.00 0.00 5.18
1967 6637 3.322466 CCCTCACTTCCCCAGCGT 61.322 66.667 0.00 0.00 0.00 5.07
1969 6639 1.376037 CCTCACTTCCCCAGCGTTC 60.376 63.158 0.00 0.00 0.00 3.95
1970 6640 1.674057 CTCACTTCCCCAGCGTTCT 59.326 57.895 0.00 0.00 0.00 3.01
1971 6641 0.671781 CTCACTTCCCCAGCGTTCTG 60.672 60.000 0.00 0.00 40.02 3.02
1982 6652 3.837213 CAGCGTTCTGGTCAATTCATT 57.163 42.857 0.00 0.00 36.68 2.57
1983 6653 3.495193 CAGCGTTCTGGTCAATTCATTG 58.505 45.455 0.00 0.00 36.68 2.82
1984 6654 3.189080 CAGCGTTCTGGTCAATTCATTGA 59.811 43.478 0.00 0.00 39.19 2.57
1996 6666 4.937015 TCAATTCATTGATTCACTCGCTCA 59.063 37.500 0.00 0.00 41.51 4.26
1997 6667 5.412286 TCAATTCATTGATTCACTCGCTCAA 59.588 36.000 0.00 0.00 41.51 3.02
1998 6668 6.094464 TCAATTCATTGATTCACTCGCTCAAT 59.906 34.615 0.00 0.00 41.51 2.57
2000 6670 4.611310 CATTGATTCACTCGCTCAATGT 57.389 40.909 13.63 0.00 45.65 2.71
2002 6672 6.110543 CATTGATTCACTCGCTCAATGTTA 57.889 37.500 13.63 0.00 45.65 2.41
2004 6674 3.618594 TGATTCACTCGCTCAATGTTAGC 59.381 43.478 0.00 0.00 36.60 3.09
2011 6681 0.247301 GCTCAATGTTAGCGCGTGAC 60.247 55.000 8.43 4.77 0.00 3.67
2012 6682 1.067693 CTCAATGTTAGCGCGTGACA 58.932 50.000 8.43 14.15 0.00 3.58
2013 6683 1.459209 CTCAATGTTAGCGCGTGACAA 59.541 47.619 8.43 0.00 0.00 3.18
2014 6684 1.867865 TCAATGTTAGCGCGTGACAAA 59.132 42.857 8.43 4.46 0.00 2.83
2015 6685 2.096466 TCAATGTTAGCGCGTGACAAAG 60.096 45.455 8.43 11.52 0.00 2.77
2016 6686 0.796312 ATGTTAGCGCGTGACAAAGG 59.204 50.000 8.43 0.00 0.00 3.11
2017 6687 1.225376 TGTTAGCGCGTGACAAAGGG 61.225 55.000 8.43 0.00 0.00 3.95
2019 6689 3.599285 TAGCGCGTGACAAAGGGGG 62.599 63.158 8.43 0.00 0.00 5.40
2038 6708 4.702831 GGGGGCCATTTACATTTGTATTG 58.297 43.478 4.39 0.00 0.00 1.90
2039 6709 4.163268 GGGGGCCATTTACATTTGTATTGT 59.837 41.667 4.39 0.00 0.00 2.71
2041 6711 5.584251 GGGGCCATTTACATTTGTATTGTTG 59.416 40.000 4.39 0.00 0.00 3.33
2043 6713 6.402222 GGCCATTTACATTTGTATTGTTGGA 58.598 36.000 0.00 0.00 0.00 3.53
2044 6714 7.047271 GGCCATTTACATTTGTATTGTTGGAT 58.953 34.615 0.00 0.00 0.00 3.41
2045 6715 8.200792 GGCCATTTACATTTGTATTGTTGGATA 58.799 33.333 0.00 0.00 0.00 2.59
2046 6716 9.593134 GCCATTTACATTTGTATTGTTGGATAA 57.407 29.630 10.46 0.00 0.00 1.75
2055 6725 9.927668 ATTTGTATTGTTGGATAAAACTCAAGG 57.072 29.630 0.00 0.00 0.00 3.61
2056 6726 7.461182 TGTATTGTTGGATAAAACTCAAGGG 57.539 36.000 0.00 0.00 0.00 3.95
2057 6727 4.864704 TTGTTGGATAAAACTCAAGGGC 57.135 40.909 0.00 0.00 0.00 5.19
2058 6728 3.838565 TGTTGGATAAAACTCAAGGGCA 58.161 40.909 0.00 0.00 0.00 5.36
2059 6729 4.219115 TGTTGGATAAAACTCAAGGGCAA 58.781 39.130 0.00 0.00 0.00 4.52
2060 6730 4.038642 TGTTGGATAAAACTCAAGGGCAAC 59.961 41.667 0.00 0.00 0.00 4.17
2061 6731 3.838565 TGGATAAAACTCAAGGGCAACA 58.161 40.909 0.00 0.00 39.74 3.33
2062 6732 4.219115 TGGATAAAACTCAAGGGCAACAA 58.781 39.130 0.00 0.00 39.74 2.83
2063 6733 4.837860 TGGATAAAACTCAAGGGCAACAAT 59.162 37.500 0.00 0.00 39.74 2.71
2064 6734 5.170748 GGATAAAACTCAAGGGCAACAATG 58.829 41.667 0.00 0.00 39.74 2.82
2065 6735 5.279456 GGATAAAACTCAAGGGCAACAATGT 60.279 40.000 0.00 0.00 39.74 2.71
2066 6736 3.457610 AAACTCAAGGGCAACAATGTG 57.542 42.857 0.00 0.00 39.74 3.21
2069 6739 1.000060 CTCAAGGGCAACAATGTGTGG 60.000 52.381 0.00 0.00 39.74 4.17
2070 6740 0.033781 CAAGGGCAACAATGTGTGGG 59.966 55.000 0.00 0.00 39.74 4.61
2071 6741 0.105760 AAGGGCAACAATGTGTGGGA 60.106 50.000 0.00 0.00 39.74 4.37
2072 6742 0.540365 AGGGCAACAATGTGTGGGAG 60.540 55.000 0.00 0.00 39.74 4.30
2073 6743 0.539438 GGGCAACAATGTGTGGGAGA 60.539 55.000 0.00 0.00 39.74 3.71
2074 6744 1.327303 GGCAACAATGTGTGGGAGAA 58.673 50.000 0.00 0.00 0.00 2.87
2075 6745 1.000274 GGCAACAATGTGTGGGAGAAC 60.000 52.381 0.00 0.00 0.00 3.01
2077 6747 2.030805 GCAACAATGTGTGGGAGAACTC 60.031 50.000 0.00 0.00 0.00 3.01
2078 6748 2.169832 ACAATGTGTGGGAGAACTCG 57.830 50.000 0.00 0.00 0.00 4.18
2079 6749 1.416401 ACAATGTGTGGGAGAACTCGT 59.584 47.619 0.00 0.00 0.00 4.18
2081 6751 1.338107 ATGTGTGGGAGAACTCGTGA 58.662 50.000 0.00 0.00 0.00 4.35
2082 6752 0.387929 TGTGTGGGAGAACTCGTGAC 59.612 55.000 0.00 0.00 0.00 3.67
2084 6754 0.820482 TGTGGGAGAACTCGTGACGA 60.820 55.000 7.70 7.70 0.00 4.20
2085 6755 0.526662 GTGGGAGAACTCGTGACGAT 59.473 55.000 8.60 0.00 34.61 3.73
2086 6756 1.067776 GTGGGAGAACTCGTGACGATT 60.068 52.381 8.60 0.00 34.61 3.34
2088 6758 1.473278 GGGAGAACTCGTGACGATTCT 59.527 52.381 22.83 22.83 36.89 2.40
2089 6759 2.681848 GGGAGAACTCGTGACGATTCTA 59.318 50.000 22.74 0.00 35.59 2.10
2090 6760 3.128242 GGGAGAACTCGTGACGATTCTAA 59.872 47.826 22.74 0.00 35.59 2.10
2092 6762 5.341617 GGAGAACTCGTGACGATTCTAATT 58.658 41.667 22.74 9.48 35.59 1.40
2094 6764 5.103000 AGAACTCGTGACGATTCTAATTGG 58.897 41.667 21.95 7.08 34.61 3.16
2095 6765 4.713824 ACTCGTGACGATTCTAATTGGA 57.286 40.909 8.60 0.00 34.61 3.53
2097 6767 4.158025 ACTCGTGACGATTCTAATTGGAGT 59.842 41.667 8.60 0.00 34.61 3.85
2099 6769 6.039493 ACTCGTGACGATTCTAATTGGAGTAT 59.961 38.462 8.60 0.00 34.61 2.12
2100 6770 6.802608 TCGTGACGATTCTAATTGGAGTATT 58.197 36.000 2.39 0.00 0.00 1.89
2101 6771 7.262772 TCGTGACGATTCTAATTGGAGTATTT 58.737 34.615 2.39 0.00 0.00 1.40
2102 6772 7.222031 TCGTGACGATTCTAATTGGAGTATTTG 59.778 37.037 2.39 0.00 0.00 2.32
2103 6773 7.010183 CGTGACGATTCTAATTGGAGTATTTGT 59.990 37.037 0.00 0.00 0.00 2.83
2104 6774 8.665685 GTGACGATTCTAATTGGAGTATTTGTT 58.334 33.333 0.00 0.00 0.00 2.83
2105 6775 8.664798 TGACGATTCTAATTGGAGTATTTGTTG 58.335 33.333 0.00 0.00 0.00 3.33
2106 6776 8.786826 ACGATTCTAATTGGAGTATTTGTTGA 57.213 30.769 0.00 0.00 0.00 3.18
2107 6777 9.226606 ACGATTCTAATTGGAGTATTTGTTGAA 57.773 29.630 0.00 0.00 0.00 2.69
2117 6787 8.741101 TGGAGTATTTGTTGAATTTGAAATCG 57.259 30.769 0.00 0.00 0.00 3.34
2118 6788 8.572185 TGGAGTATTTGTTGAATTTGAAATCGA 58.428 29.630 0.00 0.00 0.00 3.59
2119 6789 9.573133 GGAGTATTTGTTGAATTTGAAATCGAT 57.427 29.630 0.00 0.00 0.00 3.59
2162 6881 7.747888 TGAATATTTGGTTATGTCTTGTGACG 58.252 34.615 0.00 0.00 45.70 4.35
2163 6882 7.604545 TGAATATTTGGTTATGTCTTGTGACGA 59.395 33.333 0.00 0.00 45.70 4.20
2164 6883 8.506168 AATATTTGGTTATGTCTTGTGACGAT 57.494 30.769 0.00 0.00 45.70 3.73
2165 6884 6.817765 ATTTGGTTATGTCTTGTGACGATT 57.182 33.333 0.00 0.00 45.70 3.34
2166 6885 5.856126 TTGGTTATGTCTTGTGACGATTC 57.144 39.130 0.00 0.00 45.70 2.52
2167 6886 5.147330 TGGTTATGTCTTGTGACGATTCT 57.853 39.130 0.00 0.00 45.70 2.40
2168 6887 6.275494 TGGTTATGTCTTGTGACGATTCTA 57.725 37.500 0.00 0.00 45.70 2.10
2170 6889 6.588756 TGGTTATGTCTTGTGACGATTCTAAC 59.411 38.462 0.00 0.00 45.70 2.34
2172 6891 7.201444 GGTTATGTCTTGTGACGATTCTAACTG 60.201 40.741 0.00 0.00 45.70 3.16
2173 6892 5.447624 TGTCTTGTGACGATTCTAACTGA 57.552 39.130 0.00 0.00 45.70 3.41
2174 6893 5.838529 TGTCTTGTGACGATTCTAACTGAA 58.161 37.500 0.00 0.00 45.70 3.02
2175 6894 5.920840 TGTCTTGTGACGATTCTAACTGAAG 59.079 40.000 0.00 0.00 45.70 3.02
2177 6896 7.082602 GTCTTGTGACGATTCTAACTGAAGTA 58.917 38.462 0.00 0.00 34.23 2.24
2178 6897 7.755822 GTCTTGTGACGATTCTAACTGAAGTAT 59.244 37.037 0.00 0.00 34.23 2.12
2180 6899 7.812309 TGTGACGATTCTAACTGAAGTATTG 57.188 36.000 0.00 0.00 38.18 1.90
2181 6900 7.375834 TGTGACGATTCTAACTGAAGTATTGT 58.624 34.615 0.00 0.00 38.18 2.71
2182 6901 7.870954 TGTGACGATTCTAACTGAAGTATTGTT 59.129 33.333 0.00 0.00 38.18 2.83
2183 6902 8.162880 GTGACGATTCTAACTGAAGTATTGTTG 58.837 37.037 0.00 0.00 38.18 3.33
2185 6904 9.350357 GACGATTCTAACTGAAGTATTGTTGTA 57.650 33.333 0.00 0.00 38.18 2.41
2186 6905 9.136952 ACGATTCTAACTGAAGTATTGTTGTAC 57.863 33.333 0.00 0.00 38.18 2.90
2187 6906 9.355215 CGATTCTAACTGAAGTATTGTTGTACT 57.645 33.333 0.00 0.00 38.18 2.73
2223 6942 8.352201 TGCAAGTTATTTATAGATGGATTGTGC 58.648 33.333 0.00 0.00 0.00 4.57
2233 6952 9.851686 TTATAGATGGATTGTGCTATTTTCTGT 57.148 29.630 0.00 0.00 0.00 3.41
2235 6954 9.851686 ATAGATGGATTGTGCTATTTTCTGTAA 57.148 29.630 0.00 0.00 0.00 2.41
2236 6955 8.757982 AGATGGATTGTGCTATTTTCTGTAAT 57.242 30.769 0.00 0.00 0.00 1.89
2237 6956 9.193806 AGATGGATTGTGCTATTTTCTGTAATT 57.806 29.630 0.00 0.00 0.00 1.40
2254 6973 8.684386 TCTGTAATTATTTTCAGTGTTGTGGA 57.316 30.769 8.68 0.00 33.38 4.02
2256 6975 8.458573 TGTAATTATTTTCAGTGTTGTGGACT 57.541 30.769 0.00 0.00 0.00 3.85
2257 6976 8.908903 TGTAATTATTTTCAGTGTTGTGGACTT 58.091 29.630 0.00 0.00 0.00 3.01
2282 7001 5.607939 AAAAACAGGGACAAACCTTTAGG 57.392 39.130 0.00 0.00 39.34 2.69
2283 7002 2.971901 ACAGGGACAAACCTTTAGGG 57.028 50.000 0.10 0.00 39.34 3.53
2298 7017 5.570320 CCTTTAGGGTATATGGTTGGATGG 58.430 45.833 0.00 0.00 0.00 3.51
2300 7019 5.836024 TTAGGGTATATGGTTGGATGGTC 57.164 43.478 0.00 0.00 0.00 4.02
2301 7020 2.637872 AGGGTATATGGTTGGATGGTCG 59.362 50.000 0.00 0.00 0.00 4.79
2302 7021 2.635915 GGGTATATGGTTGGATGGTCGA 59.364 50.000 0.00 0.00 0.00 4.20
2304 7023 4.263331 GGGTATATGGTTGGATGGTCGAAT 60.263 45.833 0.00 0.00 0.00 3.34
2309 7028 3.226777 TGGTTGGATGGTCGAATTTTGT 58.773 40.909 0.00 0.00 0.00 2.83
2310 7029 4.399219 TGGTTGGATGGTCGAATTTTGTA 58.601 39.130 0.00 0.00 0.00 2.41
2311 7030 5.013547 TGGTTGGATGGTCGAATTTTGTAT 58.986 37.500 0.00 0.00 0.00 2.29
2312 7031 5.124776 TGGTTGGATGGTCGAATTTTGTATC 59.875 40.000 0.00 0.00 0.00 2.24
2313 7032 5.357032 GGTTGGATGGTCGAATTTTGTATCT 59.643 40.000 0.00 0.00 0.00 1.98
2316 7035 6.645306 TGGATGGTCGAATTTTGTATCTACA 58.355 36.000 0.00 0.00 0.00 2.74
2318 7037 7.441157 TGGATGGTCGAATTTTGTATCTACATC 59.559 37.037 0.00 0.00 35.89 3.06
2319 7038 7.095187 GGATGGTCGAATTTTGTATCTACATCC 60.095 40.741 0.00 0.00 35.89 3.51
2320 7039 5.751509 TGGTCGAATTTTGTATCTACATCCG 59.248 40.000 0.00 0.00 35.89 4.18
2321 7040 5.333111 GGTCGAATTTTGTATCTACATCCGC 60.333 44.000 0.00 0.00 35.89 5.54
2322 7041 4.443063 TCGAATTTTGTATCTACATCCGCG 59.557 41.667 0.00 0.00 35.89 6.46
2323 7042 4.376008 CGAATTTTGTATCTACATCCGCGG 60.376 45.833 22.12 22.12 35.89 6.46
2325 7044 4.330944 TTTTGTATCTACATCCGCGGAT 57.669 40.909 34.60 34.60 35.89 4.18
2326 7045 3.570926 TTGTATCTACATCCGCGGATC 57.429 47.619 37.10 23.61 35.89 3.36
2327 7046 2.510613 TGTATCTACATCCGCGGATCA 58.489 47.619 37.10 25.88 31.62 2.92
2328 7047 2.488153 TGTATCTACATCCGCGGATCAG 59.512 50.000 37.10 32.13 31.62 2.90
2329 7048 1.621992 ATCTACATCCGCGGATCAGT 58.378 50.000 37.10 31.76 31.62 3.41
2331 7050 0.386100 CTACATCCGCGGATCAGTCG 60.386 60.000 37.10 26.60 31.62 4.18
2332 7051 1.792118 TACATCCGCGGATCAGTCGG 61.792 60.000 37.10 25.88 44.16 4.79
2333 7052 4.286320 ATCCGCGGATCAGTCGGC 62.286 66.667 34.60 3.65 44.55 5.54
2338 7057 3.822192 CGGATCAGTCGGCGGACA 61.822 66.667 24.31 7.02 45.92 4.02
2340 7059 1.519455 GGATCAGTCGGCGGACAAG 60.519 63.158 24.31 16.51 45.92 3.16
2341 7060 1.215647 GATCAGTCGGCGGACAAGT 59.784 57.895 24.31 10.49 45.92 3.16
2342 7061 1.078759 GATCAGTCGGCGGACAAGTG 61.079 60.000 24.31 14.77 45.92 3.16
2344 7063 1.594293 CAGTCGGCGGACAAGTGTT 60.594 57.895 24.31 1.68 45.92 3.32
2345 7064 1.594293 AGTCGGCGGACAAGTGTTG 60.594 57.895 24.31 0.00 45.92 3.33
2346 7065 2.280524 TCGGCGGACAAGTGTTGG 60.281 61.111 7.21 0.00 34.12 3.77
2347 7066 2.590575 CGGCGGACAAGTGTTGGT 60.591 61.111 0.00 0.00 34.12 3.67
2348 7067 2.184167 CGGCGGACAAGTGTTGGTT 61.184 57.895 0.00 0.00 34.12 3.67
2349 7068 1.720694 CGGCGGACAAGTGTTGGTTT 61.721 55.000 0.00 0.00 34.12 3.27
2350 7069 0.458260 GGCGGACAAGTGTTGGTTTT 59.542 50.000 0.00 0.00 34.12 2.43
2351 7070 1.677052 GGCGGACAAGTGTTGGTTTTA 59.323 47.619 0.00 0.00 34.12 1.52
2352 7071 2.099427 GGCGGACAAGTGTTGGTTTTAA 59.901 45.455 0.00 0.00 34.12 1.52
2353 7072 3.368495 GCGGACAAGTGTTGGTTTTAAG 58.632 45.455 0.00 0.00 34.12 1.85
2355 7074 4.788521 GCGGACAAGTGTTGGTTTTAAGAG 60.789 45.833 0.00 0.00 34.12 2.85
2356 7075 4.334481 CGGACAAGTGTTGGTTTTAAGAGT 59.666 41.667 0.00 0.00 34.12 3.24
2359 7078 4.939439 ACAAGTGTTGGTTTTAAGAGTCGT 59.061 37.500 0.00 0.00 34.12 4.34
2361 7080 4.510571 AGTGTTGGTTTTAAGAGTCGTGT 58.489 39.130 0.00 0.00 0.00 4.49
2362 7081 4.939439 AGTGTTGGTTTTAAGAGTCGTGTT 59.061 37.500 0.00 0.00 0.00 3.32
2363 7082 6.108015 AGTGTTGGTTTTAAGAGTCGTGTTA 58.892 36.000 0.00 0.00 0.00 2.41
2364 7083 6.594937 AGTGTTGGTTTTAAGAGTCGTGTTAA 59.405 34.615 0.00 0.00 0.00 2.01
2365 7084 7.119553 AGTGTTGGTTTTAAGAGTCGTGTTAAA 59.880 33.333 0.00 0.00 31.37 1.52
2366 7085 7.427318 GTGTTGGTTTTAAGAGTCGTGTTAAAG 59.573 37.037 0.00 0.00 34.04 1.85
2368 7087 6.114767 TGGTTTTAAGAGTCGTGTTAAAGGT 58.885 36.000 0.00 0.00 34.04 3.50
2370 7089 6.424683 GTTTTAAGAGTCGTGTTAAAGGTGG 58.575 40.000 0.00 0.00 34.04 4.61
2371 7090 2.165319 AGAGTCGTGTTAAAGGTGGC 57.835 50.000 0.00 0.00 0.00 5.01
2372 7091 1.154197 GAGTCGTGTTAAAGGTGGCC 58.846 55.000 0.00 0.00 0.00 5.36
2373 7092 0.763035 AGTCGTGTTAAAGGTGGCCT 59.237 50.000 3.32 0.00 33.87 5.19
2377 7096 3.754850 GTCGTGTTAAAGGTGGCCTTATT 59.245 43.478 3.32 0.00 43.92 1.40
2378 7097 4.216902 GTCGTGTTAAAGGTGGCCTTATTT 59.783 41.667 3.32 4.56 43.92 1.40
2381 7100 5.619086 CGTGTTAAAGGTGGCCTTATTTGAG 60.619 44.000 3.32 0.00 43.92 3.02
2383 7102 5.710099 TGTTAAAGGTGGCCTTATTTGAGAG 59.290 40.000 3.32 0.00 43.92 3.20
2384 7103 4.657814 AAAGGTGGCCTTATTTGAGAGA 57.342 40.909 3.32 0.00 43.92 3.10
2385 7104 3.636153 AGGTGGCCTTATTTGAGAGAC 57.364 47.619 3.32 0.00 0.00 3.36
2386 7105 2.912956 AGGTGGCCTTATTTGAGAGACA 59.087 45.455 3.32 0.00 0.00 3.41
2387 7106 3.330701 AGGTGGCCTTATTTGAGAGACAA 59.669 43.478 3.32 0.00 36.65 3.18
2388 7107 5.692781 AAGGTGGCCTTATTTGAGAGACAAA 60.693 40.000 3.32 0.00 42.74 2.83
2389 7108 7.471876 AAGGTGGCCTTATTTGAGAGACAAAG 61.472 42.308 3.32 0.00 42.74 2.77
2390 7109 9.548109 AAGGTGGCCTTATTTGAGAGACAAAGA 62.548 40.741 3.32 0.00 42.74 2.52
2399 7118 6.485830 TTTGAGAGACAAAGAAGGAAGAGA 57.514 37.500 0.00 0.00 42.57 3.10
2400 7119 6.485830 TTGAGAGACAAAGAAGGAAGAGAA 57.514 37.500 0.00 0.00 35.39 2.87
2401 7120 5.848406 TGAGAGACAAAGAAGGAAGAGAAC 58.152 41.667 0.00 0.00 0.00 3.01
2402 7121 4.877282 AGAGACAAAGAAGGAAGAGAACG 58.123 43.478 0.00 0.00 0.00 3.95
2405 7124 5.671493 AGACAAAGAAGGAAGAGAACGAAA 58.329 37.500 0.00 0.00 0.00 3.46
2406 7125 6.113411 AGACAAAGAAGGAAGAGAACGAAAA 58.887 36.000 0.00 0.00 0.00 2.29
2410 7129 4.389374 AGAAGGAAGAGAACGAAAATGCA 58.611 39.130 0.00 0.00 0.00 3.96
2411 7130 5.006386 AGAAGGAAGAGAACGAAAATGCAT 58.994 37.500 0.00 0.00 0.00 3.96
2412 7131 6.173339 AGAAGGAAGAGAACGAAAATGCATA 58.827 36.000 0.00 0.00 0.00 3.14
2413 7132 6.314896 AGAAGGAAGAGAACGAAAATGCATAG 59.685 38.462 0.00 0.00 0.00 2.23
2414 7133 4.878397 AGGAAGAGAACGAAAATGCATAGG 59.122 41.667 0.00 0.00 0.00 2.57
2415 7134 4.876107 GGAAGAGAACGAAAATGCATAGGA 59.124 41.667 0.00 0.00 0.00 2.94
2433 7152 4.057428 GCACTCGGCGACTCACCT 62.057 66.667 4.99 0.00 0.00 4.00
2434 7153 2.179517 CACTCGGCGACTCACCTC 59.820 66.667 4.99 0.00 0.00 3.85
2435 7154 2.034376 ACTCGGCGACTCACCTCT 59.966 61.111 4.99 0.00 0.00 3.69
2436 7155 1.025113 CACTCGGCGACTCACCTCTA 61.025 60.000 4.99 0.00 0.00 2.43
2437 7156 0.107116 ACTCGGCGACTCACCTCTAT 60.107 55.000 4.99 0.00 0.00 1.98
2438 7157 1.140452 ACTCGGCGACTCACCTCTATA 59.860 52.381 4.99 0.00 0.00 1.31
2439 7158 2.219458 CTCGGCGACTCACCTCTATAA 58.781 52.381 4.99 0.00 0.00 0.98
2440 7159 2.814919 CTCGGCGACTCACCTCTATAAT 59.185 50.000 4.99 0.00 0.00 1.28
2441 7160 4.001652 CTCGGCGACTCACCTCTATAATA 58.998 47.826 4.99 0.00 0.00 0.98
2442 7161 4.586884 TCGGCGACTCACCTCTATAATAT 58.413 43.478 4.99 0.00 0.00 1.28
2443 7162 4.634883 TCGGCGACTCACCTCTATAATATC 59.365 45.833 4.99 0.00 0.00 1.63
2444 7163 4.636648 CGGCGACTCACCTCTATAATATCT 59.363 45.833 0.00 0.00 0.00 1.98
2445 7164 5.220700 CGGCGACTCACCTCTATAATATCTC 60.221 48.000 0.00 0.00 0.00 2.75
2447 7166 6.403855 GGCGACTCACCTCTATAATATCTCAC 60.404 46.154 0.00 0.00 0.00 3.51
2448 7167 6.403855 GCGACTCACCTCTATAATATCTCACC 60.404 46.154 0.00 0.00 0.00 4.02
2449 7168 6.655425 CGACTCACCTCTATAATATCTCACCA 59.345 42.308 0.00 0.00 0.00 4.17
2450 7169 7.338196 CGACTCACCTCTATAATATCTCACCAT 59.662 40.741 0.00 0.00 0.00 3.55
2451 7170 8.964533 ACTCACCTCTATAATATCTCACCATT 57.035 34.615 0.00 0.00 0.00 3.16
2464 7183 9.512588 AATATCTCACCATTAAAGAAGCATAGG 57.487 33.333 0.00 0.00 0.00 2.57
2465 7184 5.684704 TCTCACCATTAAAGAAGCATAGGG 58.315 41.667 0.00 0.00 0.00 3.53
2466 7185 5.428457 TCTCACCATTAAAGAAGCATAGGGA 59.572 40.000 0.00 0.00 0.00 4.20
2467 7186 6.101734 TCTCACCATTAAAGAAGCATAGGGAT 59.898 38.462 0.00 0.00 0.00 3.85
2468 7187 6.672593 TCACCATTAAAGAAGCATAGGGATT 58.327 36.000 0.00 0.00 0.00 3.01
2469 7188 6.772716 TCACCATTAAAGAAGCATAGGGATTC 59.227 38.462 0.00 0.00 42.22 2.52
2470 7189 5.765182 ACCATTAAAGAAGCATAGGGATTCG 59.235 40.000 0.00 0.00 46.38 3.34
2472 7191 6.293626 CCATTAAAGAAGCATAGGGATTCGTG 60.294 42.308 0.00 0.00 46.38 4.35
2473 7192 3.914426 AAGAAGCATAGGGATTCGTGT 57.086 42.857 0.00 0.00 46.38 4.49
2475 7194 2.128035 GAAGCATAGGGATTCGTGTCG 58.872 52.381 0.00 0.00 31.41 4.35
2476 7195 1.112113 AGCATAGGGATTCGTGTCGT 58.888 50.000 0.00 0.00 0.00 4.34
2479 7198 3.321111 AGCATAGGGATTCGTGTCGTTAT 59.679 43.478 0.00 0.00 0.00 1.89
2481 7200 5.185249 AGCATAGGGATTCGTGTCGTTATAT 59.815 40.000 0.00 0.00 0.00 0.86
2482 7201 5.867716 GCATAGGGATTCGTGTCGTTATATT 59.132 40.000 0.00 0.00 0.00 1.28
2483 7202 7.031372 GCATAGGGATTCGTGTCGTTATATTA 58.969 38.462 0.00 0.00 0.00 0.98
2484 7203 7.220300 GCATAGGGATTCGTGTCGTTATATTAG 59.780 40.741 0.00 0.00 0.00 1.73
2485 7204 6.645790 AGGGATTCGTGTCGTTATATTAGT 57.354 37.500 0.00 0.00 0.00 2.24
2486 7205 7.047460 AGGGATTCGTGTCGTTATATTAGTT 57.953 36.000 0.00 0.00 0.00 2.24
2487 7206 7.495055 AGGGATTCGTGTCGTTATATTAGTTT 58.505 34.615 0.00 0.00 0.00 2.66
2489 7208 7.306983 GGGATTCGTGTCGTTATATTAGTTTGG 60.307 40.741 0.00 0.00 0.00 3.28
2491 7210 5.964758 TCGTGTCGTTATATTAGTTTGGGT 58.035 37.500 0.00 0.00 0.00 4.51
2492 7211 5.806502 TCGTGTCGTTATATTAGTTTGGGTG 59.193 40.000 0.00 0.00 0.00 4.61
2494 7213 6.751425 CGTGTCGTTATATTAGTTTGGGTGTA 59.249 38.462 0.00 0.00 0.00 2.90
2495 7214 7.436080 CGTGTCGTTATATTAGTTTGGGTGTAT 59.564 37.037 0.00 0.00 0.00 2.29
2496 7215 9.101655 GTGTCGTTATATTAGTTTGGGTGTATT 57.898 33.333 0.00 0.00 0.00 1.89
2498 7217 9.538508 GTCGTTATATTAGTTTGGGTGTATTCT 57.461 33.333 0.00 0.00 0.00 2.40
2508 7227 8.631480 AGTTTGGGTGTATTCTTTAGTTTAGG 57.369 34.615 0.00 0.00 0.00 2.69
2509 7228 8.442374 AGTTTGGGTGTATTCTTTAGTTTAGGA 58.558 33.333 0.00 0.00 0.00 2.94
2511 7230 6.400568 TGGGTGTATTCTTTAGTTTAGGACG 58.599 40.000 0.00 0.00 0.00 4.79
2512 7231 6.211184 TGGGTGTATTCTTTAGTTTAGGACGA 59.789 38.462 0.00 0.00 0.00 4.20
2513 7232 7.093201 TGGGTGTATTCTTTAGTTTAGGACGAT 60.093 37.037 0.00 0.00 0.00 3.73
2514 7233 7.224167 GGGTGTATTCTTTAGTTTAGGACGATG 59.776 40.741 0.00 0.00 0.00 3.84
2515 7234 7.977853 GGTGTATTCTTTAGTTTAGGACGATGA 59.022 37.037 0.00 0.00 0.00 2.92
2516 7235 9.362539 GTGTATTCTTTAGTTTAGGACGATGAA 57.637 33.333 0.00 0.00 0.00 2.57
2527 7246 9.892130 AGTTTAGGACGATGAATATCTTTCTTT 57.108 29.630 0.00 0.00 0.00 2.52
2532 7251 9.757227 AGGACGATGAATATCTTTCTTTAAGAG 57.243 33.333 0.00 0.00 45.69 2.85
2533 7252 9.751542 GGACGATGAATATCTTTCTTTAAGAGA 57.248 33.333 0.00 0.00 45.69 3.10
2554 7273 9.440761 AAGAGAAGTATATGGTTGTATCCTTCT 57.559 33.333 0.00 0.00 39.88 2.85
2555 7274 8.865090 AGAGAAGTATATGGTTGTATCCTTCTG 58.135 37.037 6.51 0.00 37.95 3.02
2558 7277 9.262358 GAAGTATATGGTTGTATCCTTCTGAAC 57.738 37.037 0.00 0.00 0.00 3.18
2559 7278 8.319057 AGTATATGGTTGTATCCTTCTGAACA 57.681 34.615 0.00 0.00 0.00 3.18
2561 7280 4.974645 TGGTTGTATCCTTCTGAACACT 57.025 40.909 0.00 0.00 0.00 3.55
2562 7281 4.894784 TGGTTGTATCCTTCTGAACACTC 58.105 43.478 0.00 0.00 0.00 3.51
2565 7284 6.269077 TGGTTGTATCCTTCTGAACACTCTTA 59.731 38.462 0.00 0.00 0.00 2.10
2566 7285 7.159372 GGTTGTATCCTTCTGAACACTCTTAA 58.841 38.462 0.00 0.00 0.00 1.85
2568 7287 8.660373 GTTGTATCCTTCTGAACACTCTTAATG 58.340 37.037 0.00 0.00 0.00 1.90
2570 7289 8.762645 TGTATCCTTCTGAACACTCTTAATGAT 58.237 33.333 0.00 0.00 0.00 2.45
2571 7290 9.255304 GTATCCTTCTGAACACTCTTAATGATC 57.745 37.037 0.00 0.00 0.00 2.92
2572 7291 7.487822 TCCTTCTGAACACTCTTAATGATCT 57.512 36.000 0.00 0.00 0.00 2.75
2574 7293 7.398618 TCCTTCTGAACACTCTTAATGATCTCT 59.601 37.037 0.00 0.00 0.00 3.10
2578 7297 6.871844 TGAACACTCTTAATGATCTCTGAGG 58.128 40.000 4.59 0.00 0.00 3.86
2579 7298 6.665248 TGAACACTCTTAATGATCTCTGAGGA 59.335 38.462 4.59 0.00 0.00 3.71
2580 7299 7.344093 TGAACACTCTTAATGATCTCTGAGGAT 59.656 37.037 4.59 0.00 0.00 3.24
2581 7300 8.774546 AACACTCTTAATGATCTCTGAGGATA 57.225 34.615 4.59 0.00 0.00 2.59
2582 7301 8.774546 ACACTCTTAATGATCTCTGAGGATAA 57.225 34.615 4.59 0.00 0.00 1.75
2583 7302 9.378504 ACACTCTTAATGATCTCTGAGGATAAT 57.621 33.333 4.59 0.00 0.00 1.28
2590 7309 8.489990 AATGATCTCTGAGGATAATAAATGCG 57.510 34.615 4.59 0.00 0.00 4.73
2591 7310 6.997655 TGATCTCTGAGGATAATAAATGCGT 58.002 36.000 4.59 0.00 0.00 5.24
2592 7311 7.445121 TGATCTCTGAGGATAATAAATGCGTT 58.555 34.615 4.59 0.00 0.00 4.84
2595 7314 9.950496 ATCTCTGAGGATAATAAATGCGTTATT 57.050 29.630 4.59 9.42 43.44 1.40
2597 7316 8.902540 TCTGAGGATAATAAATGCGTTATTGT 57.097 30.769 12.97 8.06 41.55 2.71
2598 7317 8.773645 TCTGAGGATAATAAATGCGTTATTGTG 58.226 33.333 12.97 0.00 41.55 3.33
2599 7318 7.870826 TGAGGATAATAAATGCGTTATTGTGG 58.129 34.615 12.97 0.00 41.55 4.17
2600 7319 7.040755 TGAGGATAATAAATGCGTTATTGTGGG 60.041 37.037 12.97 0.00 41.55 4.61
2605 7324 0.323360 ATGCGTTATTGTGGGTGGCT 60.323 50.000 0.00 0.00 0.00 4.75
2606 7325 0.538516 TGCGTTATTGTGGGTGGCTT 60.539 50.000 0.00 0.00 0.00 4.35
2607 7326 0.109319 GCGTTATTGTGGGTGGCTTG 60.109 55.000 0.00 0.00 0.00 4.01
2608 7327 1.529226 CGTTATTGTGGGTGGCTTGA 58.471 50.000 0.00 0.00 0.00 3.02
2610 7329 2.491693 CGTTATTGTGGGTGGCTTGAAT 59.508 45.455 0.00 0.00 0.00 2.57
2613 7332 1.327303 TTGTGGGTGGCTTGAATGAC 58.673 50.000 0.00 0.00 0.00 3.06
2614 7333 0.184692 TGTGGGTGGCTTGAATGACA 59.815 50.000 0.00 0.00 0.00 3.58
2616 7335 1.203052 GTGGGTGGCTTGAATGACATG 59.797 52.381 0.00 0.00 0.00 3.21
2617 7336 1.203038 TGGGTGGCTTGAATGACATGT 60.203 47.619 0.00 0.00 0.00 3.21
2618 7337 1.203052 GGGTGGCTTGAATGACATGTG 59.797 52.381 1.15 0.00 0.00 3.21
2619 7338 2.161855 GGTGGCTTGAATGACATGTGA 58.838 47.619 1.15 0.00 0.00 3.58
2621 7340 2.553602 GTGGCTTGAATGACATGTGACA 59.446 45.455 1.15 0.00 0.00 3.58
2622 7341 2.815503 TGGCTTGAATGACATGTGACAG 59.184 45.455 1.15 0.00 0.00 3.51
2623 7342 2.816087 GGCTTGAATGACATGTGACAGT 59.184 45.455 1.15 0.00 0.00 3.55
2624 7343 3.365666 GGCTTGAATGACATGTGACAGTG 60.366 47.826 1.15 0.00 0.00 3.66
2625 7344 3.365666 GCTTGAATGACATGTGACAGTGG 60.366 47.826 1.15 0.00 0.00 4.00
2626 7345 2.153645 TGAATGACATGTGACAGTGGC 58.846 47.619 1.15 0.00 0.00 5.01
2627 7346 1.470098 GAATGACATGTGACAGTGGCC 59.530 52.381 1.15 0.00 0.00 5.36
2628 7347 0.322816 ATGACATGTGACAGTGGCCC 60.323 55.000 1.15 0.00 0.00 5.80
2629 7348 1.073025 GACATGTGACAGTGGCCCA 59.927 57.895 1.15 0.00 0.00 5.36
2630 7349 0.537143 GACATGTGACAGTGGCCCAA 60.537 55.000 1.15 0.00 0.00 4.12
2632 7351 1.600636 ATGTGACAGTGGCCCAACG 60.601 57.895 0.00 0.00 0.00 4.10
2633 7352 2.203153 GTGACAGTGGCCCAACGT 60.203 61.111 0.00 0.00 0.00 3.99
2634 7353 2.203139 TGACAGTGGCCCAACGTG 60.203 61.111 0.00 0.00 0.00 4.49
2636 7355 4.497984 ACAGTGGCCCAACGTGCA 62.498 61.111 0.00 0.00 0.00 4.57
2637 7356 2.985282 CAGTGGCCCAACGTGCAT 60.985 61.111 0.00 0.00 0.00 3.96
2638 7357 2.985282 AGTGGCCCAACGTGCATG 60.985 61.111 3.82 3.82 0.00 4.06
2639 7358 4.722855 GTGGCCCAACGTGCATGC 62.723 66.667 11.82 11.82 0.00 4.06
2641 7360 4.424566 GGCCCAACGTGCATGCAG 62.425 66.667 23.41 17.33 0.00 4.41
2642 7361 3.364441 GCCCAACGTGCATGCAGA 61.364 61.111 23.41 0.00 0.00 4.26
2643 7362 2.703798 GCCCAACGTGCATGCAGAT 61.704 57.895 23.41 9.50 0.00 2.90
2644 7363 1.885157 CCCAACGTGCATGCAGATT 59.115 52.632 23.41 15.59 0.00 2.40
2646 7365 1.337074 CCCAACGTGCATGCAGATTTT 60.337 47.619 23.41 8.89 0.00 1.82
2647 7366 1.722464 CCAACGTGCATGCAGATTTTG 59.278 47.619 23.41 19.59 0.00 2.44
2649 7368 2.796031 CAACGTGCATGCAGATTTTGTT 59.204 40.909 23.41 15.26 0.00 2.83
2650 7369 2.396601 ACGTGCATGCAGATTTTGTTG 58.603 42.857 23.41 5.07 0.00 3.33
2651 7370 2.034432 ACGTGCATGCAGATTTTGTTGA 59.966 40.909 23.41 0.00 0.00 3.18
2652 7371 2.659757 CGTGCATGCAGATTTTGTTGAG 59.340 45.455 23.41 0.00 0.00 3.02
2654 7373 1.997606 GCATGCAGATTTTGTTGAGCC 59.002 47.619 14.21 0.00 0.00 4.70
2655 7374 2.353406 GCATGCAGATTTTGTTGAGCCT 60.353 45.455 14.21 0.00 0.00 4.58
2657 7376 2.585330 TGCAGATTTTGTTGAGCCTCA 58.415 42.857 0.00 0.00 0.00 3.86
2658 7377 2.294233 TGCAGATTTTGTTGAGCCTCAC 59.706 45.455 0.00 0.00 0.00 3.51
2662 7381 3.632145 AGATTTTGTTGAGCCTCACGTTT 59.368 39.130 0.00 0.00 0.00 3.60
2663 7382 4.819630 AGATTTTGTTGAGCCTCACGTTTA 59.180 37.500 0.00 0.00 0.00 2.01
2665 7384 2.605837 TGTTGAGCCTCACGTTTACA 57.394 45.000 0.00 0.00 0.00 2.41
2666 7385 2.907634 TGTTGAGCCTCACGTTTACAA 58.092 42.857 0.00 0.00 0.00 2.41
2667 7386 2.610374 TGTTGAGCCTCACGTTTACAAC 59.390 45.455 0.00 0.00 37.31 3.32
2669 7388 2.206750 TGAGCCTCACGTTTACAACAC 58.793 47.619 0.00 0.00 0.00 3.32
2670 7389 2.206750 GAGCCTCACGTTTACAACACA 58.793 47.619 0.00 0.00 0.00 3.72
2671 7390 2.806244 GAGCCTCACGTTTACAACACAT 59.194 45.455 0.00 0.00 0.00 3.21
2672 7391 2.806244 AGCCTCACGTTTACAACACATC 59.194 45.455 0.00 0.00 0.00 3.06
2674 7393 3.991773 GCCTCACGTTTACAACACATCTA 59.008 43.478 0.00 0.00 0.00 1.98
2675 7394 4.449743 GCCTCACGTTTACAACACATCTAA 59.550 41.667 0.00 0.00 0.00 2.10
2676 7395 5.121768 GCCTCACGTTTACAACACATCTAAT 59.878 40.000 0.00 0.00 0.00 1.73
2677 7396 6.311935 GCCTCACGTTTACAACACATCTAATA 59.688 38.462 0.00 0.00 0.00 0.98
2678 7397 7.148540 GCCTCACGTTTACAACACATCTAATAA 60.149 37.037 0.00 0.00 0.00 1.40
2679 7398 8.879759 CCTCACGTTTACAACACATCTAATAAT 58.120 33.333 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.293924 CAGGTCTCGGCAGCTTAATG 58.706 55.000 0.00 0.00 0.00 1.90
48 49 1.982073 GATTCCCTTGCCGCTGAACG 61.982 60.000 0.00 0.00 43.15 3.95
56 57 0.472471 TGGGTATCGATTCCCTTGCC 59.528 55.000 32.58 12.93 43.74 4.52
68 69 1.134788 CAAGGTGAGGTCGTGGGTATC 60.135 57.143 0.00 0.00 0.00 2.24
70 71 0.470456 ACAAGGTGAGGTCGTGGGTA 60.470 55.000 0.00 0.00 0.00 3.69
86 87 1.200519 CCCCTGAATCGTCCCTACAA 58.799 55.000 0.00 0.00 0.00 2.41
108 109 4.286291 AGGAGAAAATTGTTAGGGTCTCGT 59.714 41.667 0.00 0.00 33.78 4.18
121 124 7.993183 TCCTGAATCGCTATTAAGGAGAAAATT 59.007 33.333 12.19 0.00 44.82 1.82
129 132 4.999950 AGCAATCCTGAATCGCTATTAAGG 59.000 41.667 7.90 7.90 43.16 2.69
139 142 6.426328 CCACTGACTTATAGCAATCCTGAATC 59.574 42.308 0.00 0.00 0.00 2.52
157 160 8.387217 ACTTCGTTAAGTCTCAGTCCACTGAC 62.387 46.154 5.25 0.00 43.74 3.51
158 161 6.438740 ACTTCGTTAAGTCTCAGTCCACTGA 61.439 44.000 9.09 9.09 45.13 3.41
159 162 3.917329 TCGTTAAGTCTCAGTCCACTG 57.083 47.619 0.00 0.00 45.08 3.66
161 164 4.240175 ACTTCGTTAAGTCTCAGTCCAC 57.760 45.455 0.00 0.00 42.42 4.02
209 217 9.834628 GAAAATTTACACGGATCTTCACATAAA 57.165 29.630 0.00 0.00 0.00 1.40
301 310 0.179018 GGTGTGGCCAGTTCTCAGTT 60.179 55.000 5.11 0.00 37.17 3.16
312 321 0.107831 TAATCGCTATGGGTGTGGCC 59.892 55.000 0.00 0.00 0.00 5.36
340 349 1.000283 CCTCCATCCGTGTAGCATCTC 60.000 57.143 0.00 0.00 0.00 2.75
381 390 1.181098 AACCTCCACCTGTGCAATGC 61.181 55.000 0.00 0.00 0.00 3.56
395 404 9.609346 TTACTTATTTGCAGTCCTATAAACCTC 57.391 33.333 0.00 0.00 0.00 3.85
403 412 9.181061 GGGTAATTTTACTTATTTGCAGTCCTA 57.819 33.333 0.87 0.00 34.16 2.94
404 413 7.123697 GGGGTAATTTTACTTATTTGCAGTCCT 59.876 37.037 0.87 0.00 34.16 3.85
411 420 8.590204 AGTTGTGGGGGTAATTTTACTTATTTG 58.410 33.333 0.87 0.00 34.16 2.32
426 435 2.141067 AGTTTTAGGAGTTGTGGGGGT 58.859 47.619 0.00 0.00 0.00 4.95
430 439 6.109359 CCTCAGATAGTTTTAGGAGTTGTGG 58.891 44.000 0.00 0.00 0.00 4.17
433 442 5.189934 ACCCCTCAGATAGTTTTAGGAGTTG 59.810 44.000 0.00 0.00 0.00 3.16
486 521 4.380233 GCATGCCAGACAAGGATTATATGC 60.380 45.833 6.36 0.00 0.00 3.14
488 523 4.763793 GTGCATGCCAGACAAGGATTATAT 59.236 41.667 16.68 0.00 0.00 0.86
490 525 2.954318 GTGCATGCCAGACAAGGATTAT 59.046 45.455 16.68 0.00 0.00 1.28
493 528 0.682209 GGTGCATGCCAGACAAGGAT 60.682 55.000 16.68 0.00 0.00 3.24
494 529 1.303561 GGTGCATGCCAGACAAGGA 60.304 57.895 16.68 0.00 0.00 3.36
497 532 0.540133 ACATGGTGCATGCCAGACAA 60.540 50.000 16.68 0.00 44.80 3.18
498 533 0.961857 GACATGGTGCATGCCAGACA 60.962 55.000 16.68 9.15 44.80 3.41
499 534 1.660560 GGACATGGTGCATGCCAGAC 61.661 60.000 16.68 6.67 44.80 3.51
500 535 1.378911 GGACATGGTGCATGCCAGA 60.379 57.895 16.68 0.00 44.80 3.86
501 536 2.420568 GGGACATGGTGCATGCCAG 61.421 63.158 16.68 2.80 44.80 4.85
502 537 2.362760 GGGACATGGTGCATGCCA 60.363 61.111 16.68 7.22 44.80 4.92
503 538 1.983481 TTGGGACATGGTGCATGCC 60.983 57.895 16.68 6.42 44.80 4.40
504 539 1.216178 GTTGGGACATGGTGCATGC 59.784 57.895 11.82 11.82 44.80 4.06
505 540 1.243342 ACGTTGGGACATGGTGCATG 61.243 55.000 0.00 0.00 46.18 4.06
508 543 0.604243 TACACGTTGGGACATGGTGC 60.604 55.000 0.00 0.00 42.89 5.01
563 600 1.682257 GGAAGCTTCCTGCAGGTCT 59.318 57.895 33.98 22.52 45.94 3.85
694 735 1.215647 GCCGGACTCTGATGAACGT 59.784 57.895 5.05 0.00 0.00 3.99
695 736 1.519455 GGCCGGACTCTGATGAACG 60.519 63.158 5.05 0.00 0.00 3.95
836 3395 9.632807 TTGTAGATTTTCCGATTGTTAATTTGG 57.367 29.630 0.00 0.00 0.00 3.28
907 3528 0.394352 GTATGGGTGGCTGGTGAAGG 60.394 60.000 0.00 0.00 0.00 3.46
966 3597 2.341257 AGAATTCTGCTGTGCACGTAG 58.659 47.619 13.13 15.11 33.79 3.51
987 3618 2.824041 GCCATTGCCGATCGGTGT 60.824 61.111 33.33 17.73 37.65 4.16
1044 3697 0.804156 GCCGGAAGAAGAGAAGAGCG 60.804 60.000 5.05 0.00 0.00 5.03
1045 3698 0.534873 AGCCGGAAGAAGAGAAGAGC 59.465 55.000 5.05 0.00 0.00 4.09
1046 3699 1.134848 CCAGCCGGAAGAAGAGAAGAG 60.135 57.143 5.05 0.00 0.00 2.85
1216 3883 2.036890 ACCTCCTCCGGTAGCGTT 59.963 61.111 13.99 0.00 34.94 4.84
1459 4126 4.316823 AGGGCCGTGGTCTCCTGA 62.317 66.667 0.00 0.00 0.00 3.86
1718 4385 2.819984 AATCCCGCACGACCATTGCT 62.820 55.000 0.00 0.00 37.87 3.91
1722 4389 2.824041 GCAATCCCGCACGACCAT 60.824 61.111 0.00 0.00 0.00 3.55
1723 4390 4.321966 TGCAATCCCGCACGACCA 62.322 61.111 0.00 0.00 36.86 4.02
1756 4423 6.970484 ACATGCTAATAAACCGGAAATCATC 58.030 36.000 9.46 0.00 0.00 2.92
1757 4424 6.545666 TGACATGCTAATAAACCGGAAATCAT 59.454 34.615 9.46 0.00 0.00 2.45
1759 4426 6.371809 TGACATGCTAATAAACCGGAAATC 57.628 37.500 9.46 0.00 0.00 2.17
1760 4427 6.377146 AGTTGACATGCTAATAAACCGGAAAT 59.623 34.615 9.46 0.00 0.00 2.17
1761 4428 5.708230 AGTTGACATGCTAATAAACCGGAAA 59.292 36.000 9.46 0.00 0.00 3.13
1762 4429 5.123186 CAGTTGACATGCTAATAAACCGGAA 59.877 40.000 9.46 0.00 0.00 4.30
1763 4430 4.634004 CAGTTGACATGCTAATAAACCGGA 59.366 41.667 9.46 0.00 0.00 5.14
1764 4431 4.201910 CCAGTTGACATGCTAATAAACCGG 60.202 45.833 0.00 0.00 0.00 5.28
1767 4434 5.123820 TGCTCCAGTTGACATGCTAATAAAC 59.876 40.000 0.00 0.00 0.00 2.01
1768 4435 5.252547 TGCTCCAGTTGACATGCTAATAAA 58.747 37.500 0.00 0.00 0.00 1.40
1769 4436 4.842574 TGCTCCAGTTGACATGCTAATAA 58.157 39.130 0.00 0.00 0.00 1.40
1770 4437 4.486125 TGCTCCAGTTGACATGCTAATA 57.514 40.909 0.00 0.00 0.00 0.98
1771 4438 3.354948 TGCTCCAGTTGACATGCTAAT 57.645 42.857 0.00 0.00 0.00 1.73
1772 4439 2.857186 TGCTCCAGTTGACATGCTAA 57.143 45.000 0.00 0.00 0.00 3.09
1773 4440 2.857186 TTGCTCCAGTTGACATGCTA 57.143 45.000 0.00 0.00 0.00 3.49
1774 4441 1.985473 TTTGCTCCAGTTGACATGCT 58.015 45.000 0.00 0.00 0.00 3.79
1775 4442 2.798976 TTTTGCTCCAGTTGACATGC 57.201 45.000 0.00 0.00 0.00 4.06
1776 4443 5.051816 ACAAATTTTGCTCCAGTTGACATG 58.948 37.500 9.04 0.00 0.00 3.21
1777 4444 5.280654 ACAAATTTTGCTCCAGTTGACAT 57.719 34.783 9.04 0.00 0.00 3.06
1783 4450 7.441017 TGCTAATAAACAAATTTTGCTCCAGT 58.559 30.769 9.04 0.00 0.00 4.00
1805 4481 4.766375 AGCACGGTGTAGTAATAATTGCT 58.234 39.130 10.24 0.00 33.02 3.91
1806 4482 6.780706 ATAGCACGGTGTAGTAATAATTGC 57.219 37.500 10.24 0.00 0.00 3.56
1810 4486 8.906867 AGAAACTATAGCACGGTGTAGTAATAA 58.093 33.333 10.24 0.00 0.00 1.40
1811 4487 8.455903 AGAAACTATAGCACGGTGTAGTAATA 57.544 34.615 10.24 1.04 0.00 0.98
1850 4526 7.093727 TGTCGCCATTATTATTTCTTTCCCAAA 60.094 33.333 0.00 0.00 0.00 3.28
1852 4528 5.888724 TGTCGCCATTATTATTTCTTTCCCA 59.111 36.000 0.00 0.00 0.00 4.37
1853 4529 6.039382 AGTGTCGCCATTATTATTTCTTTCCC 59.961 38.462 0.00 0.00 0.00 3.97
1862 4538 6.230472 TGAGCATAAGTGTCGCCATTATTAT 58.770 36.000 0.00 0.00 0.00 1.28
1863 4539 5.606505 TGAGCATAAGTGTCGCCATTATTA 58.393 37.500 0.00 0.00 0.00 0.98
1865 4541 4.071961 TGAGCATAAGTGTCGCCATTAT 57.928 40.909 0.00 0.00 0.00 1.28
1866 4542 3.535280 TGAGCATAAGTGTCGCCATTA 57.465 42.857 0.00 0.00 0.00 1.90
1868 4544 2.401583 TTGAGCATAAGTGTCGCCAT 57.598 45.000 0.00 0.00 0.00 4.40
1869 4545 2.177394 TTTGAGCATAAGTGTCGCCA 57.823 45.000 0.00 0.00 0.00 5.69
1870 4546 3.764885 ATTTTGAGCATAAGTGTCGCC 57.235 42.857 0.00 0.00 0.00 5.54
1872 4548 6.363577 ACCATATTTTGAGCATAAGTGTCG 57.636 37.500 0.00 0.00 0.00 4.35
1874 4550 8.353423 AGAAACCATATTTTGAGCATAAGTGT 57.647 30.769 0.00 0.00 0.00 3.55
1875 4551 7.917505 GGAGAAACCATATTTTGAGCATAAGTG 59.082 37.037 0.00 0.00 38.79 3.16
1876 4552 7.068716 GGGAGAAACCATATTTTGAGCATAAGT 59.931 37.037 0.00 0.00 41.20 2.24
1877 4553 7.428826 GGGAGAAACCATATTTTGAGCATAAG 58.571 38.462 0.00 0.00 41.20 1.73
1880 4556 4.339247 CGGGAGAAACCATATTTTGAGCAT 59.661 41.667 0.00 0.00 41.20 3.79
1890 6560 1.991167 ACCGGCGGGAGAAACCATA 60.991 57.895 31.78 0.00 41.20 2.74
1923 6593 3.435890 CCTCAGTTTTAGGTTCAACCCCA 60.436 47.826 1.75 0.00 39.75 4.96
1944 6614 1.379146 GGGGAAGTGAGGGTTGACC 59.621 63.158 0.00 0.00 40.67 4.02
1946 6616 1.779061 GCTGGGGAAGTGAGGGTTGA 61.779 60.000 0.00 0.00 0.00 3.18
1948 6618 2.895424 CGCTGGGGAAGTGAGGGTT 61.895 63.158 0.00 0.00 38.83 4.11
1949 6619 3.322466 CGCTGGGGAAGTGAGGGT 61.322 66.667 0.00 0.00 38.83 4.34
1950 6620 2.804828 GAACGCTGGGGAAGTGAGGG 62.805 65.000 0.00 0.00 38.83 4.30
1951 6621 1.376037 GAACGCTGGGGAAGTGAGG 60.376 63.158 0.00 0.00 38.83 3.86
1952 6622 0.671781 CAGAACGCTGGGGAAGTGAG 60.672 60.000 0.00 0.00 38.83 3.51
1962 6632 3.189080 TCAATGAATTGACCAGAACGCTG 59.811 43.478 1.55 0.00 41.51 5.18
1963 6633 3.411446 TCAATGAATTGACCAGAACGCT 58.589 40.909 1.55 0.00 41.51 5.07
1974 6644 5.225899 TGAGCGAGTGAATCAATGAATTG 57.774 39.130 0.00 0.00 39.10 2.32
1975 6645 5.885230 TTGAGCGAGTGAATCAATGAATT 57.115 34.783 0.00 0.00 0.00 2.17
1981 6651 4.093408 GCTAACATTGAGCGAGTGAATCAA 59.907 41.667 0.00 0.00 37.36 2.57
1982 6652 3.618594 GCTAACATTGAGCGAGTGAATCA 59.381 43.478 0.00 0.00 0.00 2.57
1983 6653 4.188948 GCTAACATTGAGCGAGTGAATC 57.811 45.455 0.00 0.00 0.00 2.52
1992 6662 0.247301 GTCACGCGCTAACATTGAGC 60.247 55.000 5.73 0.00 36.54 4.26
1993 6663 1.067693 TGTCACGCGCTAACATTGAG 58.932 50.000 5.73 0.00 0.00 3.02
1996 6666 1.196808 CCTTTGTCACGCGCTAACATT 59.803 47.619 5.73 0.00 0.00 2.71
1997 6667 0.796312 CCTTTGTCACGCGCTAACAT 59.204 50.000 5.73 0.00 0.00 2.71
1998 6668 1.225376 CCCTTTGTCACGCGCTAACA 61.225 55.000 5.73 5.20 0.00 2.41
1999 6669 1.495951 CCCTTTGTCACGCGCTAAC 59.504 57.895 5.73 1.99 0.00 2.34
2000 6670 1.669760 CCCCTTTGTCACGCGCTAA 60.670 57.895 5.73 0.00 0.00 3.09
2016 6686 4.163268 ACAATACAAATGTAAATGGCCCCC 59.837 41.667 0.00 0.00 33.76 5.40
2017 6687 5.351948 ACAATACAAATGTAAATGGCCCC 57.648 39.130 0.00 0.00 33.76 5.80
2019 6689 6.402222 TCCAACAATACAAATGTAAATGGCC 58.598 36.000 0.00 0.00 33.76 5.36
2020 6690 9.593134 TTATCCAACAATACAAATGTAAATGGC 57.407 29.630 11.83 0.00 33.76 4.40
2029 6699 9.927668 CCTTGAGTTTTATCCAACAATACAAAT 57.072 29.630 0.00 0.00 0.00 2.32
2030 6700 8.364142 CCCTTGAGTTTTATCCAACAATACAAA 58.636 33.333 0.00 0.00 0.00 2.83
2031 6701 7.524698 GCCCTTGAGTTTTATCCAACAATACAA 60.525 37.037 0.00 0.00 0.00 2.41
2032 6702 6.071616 GCCCTTGAGTTTTATCCAACAATACA 60.072 38.462 0.00 0.00 0.00 2.29
2034 6704 6.013379 TGCCCTTGAGTTTTATCCAACAATA 58.987 36.000 0.00 0.00 0.00 1.90
2035 6705 4.837860 TGCCCTTGAGTTTTATCCAACAAT 59.162 37.500 0.00 0.00 0.00 2.71
2036 6706 4.219115 TGCCCTTGAGTTTTATCCAACAA 58.781 39.130 0.00 0.00 0.00 2.83
2037 6707 3.838565 TGCCCTTGAGTTTTATCCAACA 58.161 40.909 0.00 0.00 0.00 3.33
2038 6708 4.038642 TGTTGCCCTTGAGTTTTATCCAAC 59.961 41.667 0.00 0.00 0.00 3.77
2039 6709 4.219115 TGTTGCCCTTGAGTTTTATCCAA 58.781 39.130 0.00 0.00 0.00 3.53
2041 6711 4.864704 TTGTTGCCCTTGAGTTTTATCC 57.135 40.909 0.00 0.00 0.00 2.59
2043 6713 5.070313 ACACATTGTTGCCCTTGAGTTTTAT 59.930 36.000 0.00 0.00 0.00 1.40
2044 6714 4.404073 ACACATTGTTGCCCTTGAGTTTTA 59.596 37.500 0.00 0.00 0.00 1.52
2045 6715 3.197549 ACACATTGTTGCCCTTGAGTTTT 59.802 39.130 0.00 0.00 0.00 2.43
2046 6716 2.765699 ACACATTGTTGCCCTTGAGTTT 59.234 40.909 0.00 0.00 0.00 2.66
2047 6717 2.101249 CACACATTGTTGCCCTTGAGTT 59.899 45.455 0.00 0.00 0.00 3.01
2050 6720 1.039068 CCACACATTGTTGCCCTTGA 58.961 50.000 0.00 0.00 0.00 3.02
2051 6721 0.033781 CCCACACATTGTTGCCCTTG 59.966 55.000 0.00 0.00 0.00 3.61
2053 6723 0.540365 CTCCCACACATTGTTGCCCT 60.540 55.000 0.00 0.00 0.00 5.19
2054 6724 0.539438 TCTCCCACACATTGTTGCCC 60.539 55.000 0.00 0.00 0.00 5.36
2055 6725 1.000274 GTTCTCCCACACATTGTTGCC 60.000 52.381 0.00 0.00 0.00 4.52
2056 6726 1.956477 AGTTCTCCCACACATTGTTGC 59.044 47.619 0.00 0.00 0.00 4.17
2057 6727 2.224079 CGAGTTCTCCCACACATTGTTG 59.776 50.000 0.00 0.00 0.00 3.33
2058 6728 2.158813 ACGAGTTCTCCCACACATTGTT 60.159 45.455 0.00 0.00 0.00 2.83
2059 6729 1.416401 ACGAGTTCTCCCACACATTGT 59.584 47.619 0.00 0.00 0.00 2.71
2060 6730 1.800586 CACGAGTTCTCCCACACATTG 59.199 52.381 0.00 0.00 0.00 2.82
2061 6731 1.691976 TCACGAGTTCTCCCACACATT 59.308 47.619 0.00 0.00 0.00 2.71
2062 6732 1.000955 GTCACGAGTTCTCCCACACAT 59.999 52.381 0.00 0.00 0.00 3.21
2063 6733 0.387929 GTCACGAGTTCTCCCACACA 59.612 55.000 0.00 0.00 0.00 3.72
2064 6734 0.663568 CGTCACGAGTTCTCCCACAC 60.664 60.000 0.00 0.00 0.00 3.82
2065 6735 0.820482 TCGTCACGAGTTCTCCCACA 60.820 55.000 0.00 0.00 0.00 4.17
2066 6736 0.526662 ATCGTCACGAGTTCTCCCAC 59.473 55.000 5.89 0.00 39.91 4.61
2069 6739 2.923605 AGAATCGTCACGAGTTCTCC 57.076 50.000 5.89 0.00 39.91 3.71
2070 6740 5.230306 CCAATTAGAATCGTCACGAGTTCTC 59.770 44.000 20.88 9.67 39.91 2.87
2071 6741 5.103000 CCAATTAGAATCGTCACGAGTTCT 58.897 41.667 20.98 20.98 39.91 3.01
2072 6742 5.100259 TCCAATTAGAATCGTCACGAGTTC 58.900 41.667 5.89 9.82 39.91 3.01
2073 6743 5.068234 TCCAATTAGAATCGTCACGAGTT 57.932 39.130 5.89 0.00 39.91 3.01
2074 6744 4.158025 ACTCCAATTAGAATCGTCACGAGT 59.842 41.667 5.89 1.56 39.91 4.18
2075 6745 4.673441 ACTCCAATTAGAATCGTCACGAG 58.327 43.478 5.89 0.00 39.91 4.18
2077 6747 7.010183 ACAAATACTCCAATTAGAATCGTCACG 59.990 37.037 0.00 0.00 0.00 4.35
2078 6748 8.197988 ACAAATACTCCAATTAGAATCGTCAC 57.802 34.615 0.00 0.00 0.00 3.67
2079 6749 8.664798 CAACAAATACTCCAATTAGAATCGTCA 58.335 33.333 0.00 0.00 0.00 4.35
2081 6751 8.786826 TCAACAAATACTCCAATTAGAATCGT 57.213 30.769 0.00 0.00 0.00 3.73
2092 6762 8.572185 TCGATTTCAAATTCAACAAATACTCCA 58.428 29.630 0.00 0.00 0.00 3.86
2099 6769 8.870160 AAGTCATCGATTTCAAATTCAACAAA 57.130 26.923 0.00 0.00 0.00 2.83
2100 6770 8.134261 TGAAGTCATCGATTTCAAATTCAACAA 58.866 29.630 8.25 0.00 35.83 2.83
2101 6771 7.647228 TGAAGTCATCGATTTCAAATTCAACA 58.353 30.769 8.25 0.00 35.83 3.33
2102 6772 8.506140 TTGAAGTCATCGATTTCAAATTCAAC 57.494 30.769 17.31 0.00 42.33 3.18
2138 6857 7.970384 TCGTCACAAGACATAACCAAATATTC 58.030 34.615 0.00 0.00 45.23 1.75
2139 6858 7.915293 TCGTCACAAGACATAACCAAATATT 57.085 32.000 0.00 0.00 45.23 1.28
2146 6865 6.812160 AGTTAGAATCGTCACAAGACATAACC 59.188 38.462 0.00 0.00 45.23 2.85
2147 6866 7.541091 TCAGTTAGAATCGTCACAAGACATAAC 59.459 37.037 0.00 0.00 45.23 1.89
2150 6869 6.025749 TCAGTTAGAATCGTCACAAGACAT 57.974 37.500 0.00 0.00 45.23 3.06
2151 6870 5.447624 TCAGTTAGAATCGTCACAAGACA 57.552 39.130 0.00 0.00 45.23 3.41
2152 6871 5.921408 ACTTCAGTTAGAATCGTCACAAGAC 59.079 40.000 0.00 0.00 37.21 3.01
2154 6873 8.376203 CAATACTTCAGTTAGAATCGTCACAAG 58.624 37.037 0.00 0.00 35.25 3.16
2156 6875 7.375834 ACAATACTTCAGTTAGAATCGTCACA 58.624 34.615 0.00 0.00 35.25 3.58
2157 6876 7.813852 ACAATACTTCAGTTAGAATCGTCAC 57.186 36.000 0.00 0.00 35.25 3.67
2158 6877 7.870954 ACAACAATACTTCAGTTAGAATCGTCA 59.129 33.333 0.00 0.00 35.25 4.35
2160 6879 9.136952 GTACAACAATACTTCAGTTAGAATCGT 57.863 33.333 0.00 0.00 35.25 3.73
2161 6880 9.355215 AGTACAACAATACTTCAGTTAGAATCG 57.645 33.333 0.00 0.00 35.25 3.34
2198 6917 8.571336 AGCACAATCCATCTATAAATAACTTGC 58.429 33.333 0.00 0.00 0.00 4.01
2207 6926 9.851686 ACAGAAAATAGCACAATCCATCTATAA 57.148 29.630 0.00 0.00 0.00 0.98
2209 6928 9.851686 TTACAGAAAATAGCACAATCCATCTAT 57.148 29.630 0.00 0.00 0.00 1.98
2211 6930 8.757982 ATTACAGAAAATAGCACAATCCATCT 57.242 30.769 0.00 0.00 0.00 2.90
2227 6946 9.743057 CCACAACACTGAAAATAATTACAGAAA 57.257 29.630 7.58 0.00 34.88 2.52
2228 6947 9.126151 TCCACAACACTGAAAATAATTACAGAA 57.874 29.630 7.58 0.00 34.88 3.02
2229 6948 8.564574 GTCCACAACACTGAAAATAATTACAGA 58.435 33.333 7.58 0.00 34.88 3.41
2230 6949 8.567948 AGTCCACAACACTGAAAATAATTACAG 58.432 33.333 0.00 0.00 36.58 2.74
2231 6950 8.458573 AGTCCACAACACTGAAAATAATTACA 57.541 30.769 0.00 0.00 0.00 2.41
2260 6979 4.407621 CCCTAAAGGTTTGTCCCTGTTTTT 59.592 41.667 0.00 0.00 34.19 1.94
2261 6980 3.964688 CCCTAAAGGTTTGTCCCTGTTTT 59.035 43.478 0.00 0.00 34.19 2.43
2263 6982 3.238788 CCCTAAAGGTTTGTCCCTGTT 57.761 47.619 0.00 0.00 34.19 3.16
2264 6983 2.971901 CCCTAAAGGTTTGTCCCTGT 57.028 50.000 0.00 0.00 34.19 4.00
2277 6996 5.221762 CGACCATCCAACCATATACCCTAAA 60.222 44.000 0.00 0.00 0.00 1.85
2279 6998 3.835978 CGACCATCCAACCATATACCCTA 59.164 47.826 0.00 0.00 0.00 3.53
2280 6999 2.637872 CGACCATCCAACCATATACCCT 59.362 50.000 0.00 0.00 0.00 4.34
2281 7000 2.635915 TCGACCATCCAACCATATACCC 59.364 50.000 0.00 0.00 0.00 3.69
2282 7001 4.345859 TTCGACCATCCAACCATATACC 57.654 45.455 0.00 0.00 0.00 2.73
2283 7002 6.877611 AAATTCGACCATCCAACCATATAC 57.122 37.500 0.00 0.00 0.00 1.47
2285 7004 5.656416 ACAAAATTCGACCATCCAACCATAT 59.344 36.000 0.00 0.00 0.00 1.78
2287 7006 3.831911 ACAAAATTCGACCATCCAACCAT 59.168 39.130 0.00 0.00 0.00 3.55
2288 7007 3.226777 ACAAAATTCGACCATCCAACCA 58.773 40.909 0.00 0.00 0.00 3.67
2289 7008 3.934457 ACAAAATTCGACCATCCAACC 57.066 42.857 0.00 0.00 0.00 3.77
2290 7009 6.436843 AGATACAAAATTCGACCATCCAAC 57.563 37.500 0.00 0.00 0.00 3.77
2291 7010 7.106890 TGTAGATACAAAATTCGACCATCCAA 58.893 34.615 0.00 0.00 32.40 3.53
2292 7011 6.645306 TGTAGATACAAAATTCGACCATCCA 58.355 36.000 0.00 0.00 32.40 3.41
2293 7012 7.095187 GGATGTAGATACAAAATTCGACCATCC 60.095 40.741 0.00 0.00 39.99 3.51
2294 7013 7.359264 CGGATGTAGATACAAAATTCGACCATC 60.359 40.741 0.00 0.00 39.99 3.51
2295 7014 6.423905 CGGATGTAGATACAAAATTCGACCAT 59.576 38.462 0.00 0.00 39.99 3.55
2297 7016 5.333111 GCGGATGTAGATACAAAATTCGACC 60.333 44.000 0.00 0.00 39.99 4.79
2298 7017 5.609696 CGCGGATGTAGATACAAAATTCGAC 60.610 44.000 0.00 0.00 39.99 4.20
2300 7019 4.376008 CCGCGGATGTAGATACAAAATTCG 60.376 45.833 24.07 0.00 39.99 3.34
2301 7020 4.748102 TCCGCGGATGTAGATACAAAATTC 59.252 41.667 27.28 0.00 39.99 2.17
2302 7021 4.699637 TCCGCGGATGTAGATACAAAATT 58.300 39.130 27.28 0.00 39.99 1.82
2304 7023 3.804786 TCCGCGGATGTAGATACAAAA 57.195 42.857 27.28 0.00 39.99 2.44
2309 7028 2.747989 GACTGATCCGCGGATGTAGATA 59.252 50.000 43.46 20.37 34.60 1.98
2310 7029 1.542030 GACTGATCCGCGGATGTAGAT 59.458 52.381 43.46 26.77 34.60 1.98
2311 7030 0.952280 GACTGATCCGCGGATGTAGA 59.048 55.000 43.46 22.63 34.60 2.59
2312 7031 0.386100 CGACTGATCCGCGGATGTAG 60.386 60.000 43.46 36.54 34.60 2.74
2313 7032 1.652563 CGACTGATCCGCGGATGTA 59.347 57.895 43.46 29.13 34.60 2.29
2321 7040 3.350909 TTGTCCGCCGACTGATCCG 62.351 63.158 6.74 0.00 39.94 4.18
2322 7041 1.519455 CTTGTCCGCCGACTGATCC 60.519 63.158 6.74 0.00 39.94 3.36
2323 7042 1.078759 CACTTGTCCGCCGACTGATC 61.079 60.000 6.74 0.00 39.94 2.92
2325 7044 2.023414 AACACTTGTCCGCCGACTGA 62.023 55.000 6.74 0.00 39.94 3.41
2326 7045 1.594293 AACACTTGTCCGCCGACTG 60.594 57.895 6.74 0.00 39.94 3.51
2327 7046 1.594293 CAACACTTGTCCGCCGACT 60.594 57.895 6.74 0.00 39.94 4.18
2328 7047 2.604174 CCAACACTTGTCCGCCGAC 61.604 63.158 0.00 0.00 39.66 4.79
2329 7048 2.280524 CCAACACTTGTCCGCCGA 60.281 61.111 0.00 0.00 0.00 5.54
2331 7050 0.458260 AAAACCAACACTTGTCCGCC 59.542 50.000 0.00 0.00 0.00 6.13
2332 7051 3.065648 TCTTAAAACCAACACTTGTCCGC 59.934 43.478 0.00 0.00 0.00 5.54
2333 7052 4.334481 ACTCTTAAAACCAACACTTGTCCG 59.666 41.667 0.00 0.00 0.00 4.79
2334 7053 5.503520 CGACTCTTAAAACCAACACTTGTCC 60.504 44.000 0.00 0.00 0.00 4.02
2335 7054 5.064325 ACGACTCTTAAAACCAACACTTGTC 59.936 40.000 0.00 0.00 0.00 3.18
2336 7055 4.939439 ACGACTCTTAAAACCAACACTTGT 59.061 37.500 0.00 0.00 0.00 3.16
2337 7056 5.163794 ACACGACTCTTAAAACCAACACTTG 60.164 40.000 0.00 0.00 0.00 3.16
2338 7057 4.939439 ACACGACTCTTAAAACCAACACTT 59.061 37.500 0.00 0.00 0.00 3.16
2340 7059 4.870221 ACACGACTCTTAAAACCAACAC 57.130 40.909 0.00 0.00 0.00 3.32
2341 7060 6.981762 TTAACACGACTCTTAAAACCAACA 57.018 33.333 0.00 0.00 0.00 3.33
2342 7061 6.908820 CCTTTAACACGACTCTTAAAACCAAC 59.091 38.462 0.00 0.00 0.00 3.77
2344 7063 6.037391 CACCTTTAACACGACTCTTAAAACCA 59.963 38.462 0.00 0.00 0.00 3.67
2345 7064 6.424683 CACCTTTAACACGACTCTTAAAACC 58.575 40.000 0.00 0.00 0.00 3.27
2346 7065 6.424683 CCACCTTTAACACGACTCTTAAAAC 58.575 40.000 0.00 0.00 0.00 2.43
2347 7066 5.007921 GCCACCTTTAACACGACTCTTAAAA 59.992 40.000 0.00 0.00 0.00 1.52
2348 7067 4.512571 GCCACCTTTAACACGACTCTTAAA 59.487 41.667 0.00 0.00 0.00 1.52
2349 7068 4.060205 GCCACCTTTAACACGACTCTTAA 58.940 43.478 0.00 0.00 0.00 1.85
2350 7069 3.555586 GGCCACCTTTAACACGACTCTTA 60.556 47.826 0.00 0.00 0.00 2.10
2351 7070 2.490991 GCCACCTTTAACACGACTCTT 58.509 47.619 0.00 0.00 0.00 2.85
2352 7071 1.270678 GGCCACCTTTAACACGACTCT 60.271 52.381 0.00 0.00 0.00 3.24
2353 7072 1.154197 GGCCACCTTTAACACGACTC 58.846 55.000 0.00 0.00 0.00 3.36
2355 7074 1.601166 AAGGCCACCTTTAACACGAC 58.399 50.000 5.01 0.00 41.69 4.34
2356 7075 3.706600 ATAAGGCCACCTTTAACACGA 57.293 42.857 5.01 0.00 41.69 4.35
2359 7078 5.636123 TCTCAAATAAGGCCACCTTTAACA 58.364 37.500 5.01 0.00 41.69 2.41
2361 7080 5.944007 GTCTCTCAAATAAGGCCACCTTTAA 59.056 40.000 5.01 0.00 41.69 1.52
2362 7081 5.013704 TGTCTCTCAAATAAGGCCACCTTTA 59.986 40.000 5.01 0.00 41.69 1.85
2363 7082 4.202567 TGTCTCTCAAATAAGGCCACCTTT 60.203 41.667 5.01 0.00 41.69 3.11
2364 7083 3.330701 TGTCTCTCAAATAAGGCCACCTT 59.669 43.478 5.01 4.01 46.63 3.50
2365 7084 2.912956 TGTCTCTCAAATAAGGCCACCT 59.087 45.455 5.01 0.00 33.87 4.00
2366 7085 3.350219 TGTCTCTCAAATAAGGCCACC 57.650 47.619 5.01 0.00 0.00 4.61
2368 7087 5.241403 TCTTTGTCTCTCAAATAAGGCCA 57.759 39.130 5.01 0.00 43.78 5.36
2372 7091 8.839310 TCTTCCTTCTTTGTCTCTCAAATAAG 57.161 34.615 9.75 9.75 43.78 1.73
2373 7092 8.651389 TCTCTTCCTTCTTTGTCTCTCAAATAA 58.349 33.333 0.00 0.00 43.78 1.40
2374 7093 8.195165 TCTCTTCCTTCTTTGTCTCTCAAATA 57.805 34.615 0.00 0.00 43.78 1.40
2377 7096 6.284459 GTTCTCTTCCTTCTTTGTCTCTCAA 58.716 40.000 0.00 0.00 0.00 3.02
2378 7097 5.508153 CGTTCTCTTCCTTCTTTGTCTCTCA 60.508 44.000 0.00 0.00 0.00 3.27
2381 7100 4.872664 TCGTTCTCTTCCTTCTTTGTCTC 58.127 43.478 0.00 0.00 0.00 3.36
2383 7102 5.986004 TTTCGTTCTCTTCCTTCTTTGTC 57.014 39.130 0.00 0.00 0.00 3.18
2384 7103 6.729187 CATTTTCGTTCTCTTCCTTCTTTGT 58.271 36.000 0.00 0.00 0.00 2.83
2385 7104 5.626955 GCATTTTCGTTCTCTTCCTTCTTTG 59.373 40.000 0.00 0.00 0.00 2.77
2386 7105 5.299279 TGCATTTTCGTTCTCTTCCTTCTTT 59.701 36.000 0.00 0.00 0.00 2.52
2387 7106 4.821805 TGCATTTTCGTTCTCTTCCTTCTT 59.178 37.500 0.00 0.00 0.00 2.52
2388 7107 4.389374 TGCATTTTCGTTCTCTTCCTTCT 58.611 39.130 0.00 0.00 0.00 2.85
2389 7108 4.749245 TGCATTTTCGTTCTCTTCCTTC 57.251 40.909 0.00 0.00 0.00 3.46
2390 7109 5.355350 CCTATGCATTTTCGTTCTCTTCCTT 59.645 40.000 3.54 0.00 0.00 3.36
2392 7111 4.876107 TCCTATGCATTTTCGTTCTCTTCC 59.124 41.667 3.54 0.00 0.00 3.46
2396 7115 3.623060 TGCTCCTATGCATTTTCGTTCTC 59.377 43.478 3.54 0.00 38.12 2.87
2397 7116 3.375299 GTGCTCCTATGCATTTTCGTTCT 59.625 43.478 3.54 0.00 45.23 3.01
2398 7117 3.375299 AGTGCTCCTATGCATTTTCGTTC 59.625 43.478 3.54 0.00 45.23 3.95
2399 7118 3.347216 AGTGCTCCTATGCATTTTCGTT 58.653 40.909 3.54 0.00 45.23 3.85
2400 7119 2.939103 GAGTGCTCCTATGCATTTTCGT 59.061 45.455 3.54 0.00 45.23 3.85
2401 7120 2.033407 CGAGTGCTCCTATGCATTTTCG 60.033 50.000 3.54 0.00 45.23 3.46
2402 7121 2.289002 CCGAGTGCTCCTATGCATTTTC 59.711 50.000 3.54 0.00 45.23 2.29
2405 7124 0.533755 GCCGAGTGCTCCTATGCATT 60.534 55.000 3.54 0.00 45.23 3.56
2406 7125 1.070445 GCCGAGTGCTCCTATGCAT 59.930 57.895 3.79 3.79 45.23 3.96
2410 7129 1.448922 GAGTCGCCGAGTGCTCCTAT 61.449 60.000 0.00 0.00 38.05 2.57
2411 7130 2.045242 AGTCGCCGAGTGCTCCTA 60.045 61.111 0.00 0.00 38.05 2.94
2412 7131 3.444805 GAGTCGCCGAGTGCTCCT 61.445 66.667 0.00 0.00 38.05 3.69
2413 7132 3.749064 TGAGTCGCCGAGTGCTCC 61.749 66.667 0.00 0.00 38.05 4.70
2414 7133 2.505118 GTGAGTCGCCGAGTGCTC 60.505 66.667 0.00 0.00 38.05 4.26
2415 7134 4.057428 GGTGAGTCGCCGAGTGCT 62.057 66.667 7.04 0.00 38.05 4.40
2419 7138 1.880271 TATAGAGGTGAGTCGCCGAG 58.120 55.000 16.97 0.00 39.30 4.63
2420 7139 2.336945 TTATAGAGGTGAGTCGCCGA 57.663 50.000 16.97 7.24 39.30 5.54
2422 7141 5.648526 TGAGATATTATAGAGGTGAGTCGCC 59.351 44.000 15.29 15.29 0.00 5.54
2423 7142 6.403855 GGTGAGATATTATAGAGGTGAGTCGC 60.404 46.154 0.00 0.00 0.00 5.19
2425 7144 8.588290 ATGGTGAGATATTATAGAGGTGAGTC 57.412 38.462 0.00 0.00 0.00 3.36
2426 7145 8.964533 AATGGTGAGATATTATAGAGGTGAGT 57.035 34.615 0.00 0.00 0.00 3.41
2438 7157 9.512588 CCTATGCTTCTTTAATGGTGAGATATT 57.487 33.333 0.00 0.00 0.00 1.28
2439 7158 8.105829 CCCTATGCTTCTTTAATGGTGAGATAT 58.894 37.037 0.00 0.00 0.00 1.63
2440 7159 7.292356 TCCCTATGCTTCTTTAATGGTGAGATA 59.708 37.037 0.00 0.00 0.00 1.98
2441 7160 6.101734 TCCCTATGCTTCTTTAATGGTGAGAT 59.898 38.462 0.00 0.00 0.00 2.75
2442 7161 5.428457 TCCCTATGCTTCTTTAATGGTGAGA 59.572 40.000 0.00 0.00 0.00 3.27
2443 7162 5.684704 TCCCTATGCTTCTTTAATGGTGAG 58.315 41.667 0.00 0.00 0.00 3.51
2444 7163 5.708736 TCCCTATGCTTCTTTAATGGTGA 57.291 39.130 0.00 0.00 0.00 4.02
2445 7164 6.293626 CGAATCCCTATGCTTCTTTAATGGTG 60.294 42.308 0.00 0.00 0.00 4.17
2447 7166 5.765182 ACGAATCCCTATGCTTCTTTAATGG 59.235 40.000 0.00 0.00 0.00 3.16
2448 7167 6.260936 ACACGAATCCCTATGCTTCTTTAATG 59.739 38.462 0.00 0.00 0.00 1.90
2449 7168 6.357367 ACACGAATCCCTATGCTTCTTTAAT 58.643 36.000 0.00 0.00 0.00 1.40
2450 7169 5.741011 ACACGAATCCCTATGCTTCTTTAA 58.259 37.500 0.00 0.00 0.00 1.52
2451 7170 5.353394 ACACGAATCCCTATGCTTCTTTA 57.647 39.130 0.00 0.00 0.00 1.85
2452 7171 4.192317 GACACGAATCCCTATGCTTCTTT 58.808 43.478 0.00 0.00 0.00 2.52
2455 7174 2.128035 CGACACGAATCCCTATGCTTC 58.872 52.381 0.00 0.00 0.00 3.86
2456 7175 1.480954 ACGACACGAATCCCTATGCTT 59.519 47.619 0.00 0.00 0.00 3.91
2457 7176 1.112113 ACGACACGAATCCCTATGCT 58.888 50.000 0.00 0.00 0.00 3.79
2458 7177 1.935933 AACGACACGAATCCCTATGC 58.064 50.000 0.00 0.00 0.00 3.14
2461 7180 7.750229 ACTAATATAACGACACGAATCCCTA 57.250 36.000 0.00 0.00 0.00 3.53
2462 7181 6.645790 ACTAATATAACGACACGAATCCCT 57.354 37.500 0.00 0.00 0.00 4.20
2464 7183 7.306983 CCCAAACTAATATAACGACACGAATCC 60.307 40.741 0.00 0.00 0.00 3.01
2465 7184 7.223387 ACCCAAACTAATATAACGACACGAATC 59.777 37.037 0.00 0.00 0.00 2.52
2466 7185 7.010738 CACCCAAACTAATATAACGACACGAAT 59.989 37.037 0.00 0.00 0.00 3.34
2467 7186 6.310956 CACCCAAACTAATATAACGACACGAA 59.689 38.462 0.00 0.00 0.00 3.85
2468 7187 5.806502 CACCCAAACTAATATAACGACACGA 59.193 40.000 0.00 0.00 0.00 4.35
2469 7188 5.577945 ACACCCAAACTAATATAACGACACG 59.422 40.000 0.00 0.00 0.00 4.49
2470 7189 6.973229 ACACCCAAACTAATATAACGACAC 57.027 37.500 0.00 0.00 0.00 3.67
2472 7191 9.538508 AGAATACACCCAAACTAATATAACGAC 57.461 33.333 0.00 0.00 0.00 4.34
2482 7201 9.729281 CCTAAACTAAAGAATACACCCAAACTA 57.271 33.333 0.00 0.00 0.00 2.24
2483 7202 8.442374 TCCTAAACTAAAGAATACACCCAAACT 58.558 33.333 0.00 0.00 0.00 2.66
2484 7203 8.509690 GTCCTAAACTAAAGAATACACCCAAAC 58.490 37.037 0.00 0.00 0.00 2.93
2485 7204 7.388500 CGTCCTAAACTAAAGAATACACCCAAA 59.612 37.037 0.00 0.00 0.00 3.28
2486 7205 6.875195 CGTCCTAAACTAAAGAATACACCCAA 59.125 38.462 0.00 0.00 0.00 4.12
2487 7206 6.211184 TCGTCCTAAACTAAAGAATACACCCA 59.789 38.462 0.00 0.00 0.00 4.51
2489 7208 7.977853 TCATCGTCCTAAACTAAAGAATACACC 59.022 37.037 0.00 0.00 0.00 4.16
2501 7220 9.892130 AAAGAAAGATATTCATCGTCCTAAACT 57.108 29.630 0.00 0.00 36.20 2.66
2506 7225 9.757227 CTCTTAAAGAAAGATATTCATCGTCCT 57.243 33.333 0.00 0.00 43.32 3.85
2507 7226 9.751542 TCTCTTAAAGAAAGATATTCATCGTCC 57.248 33.333 0.00 0.00 43.32 4.79
2532 7251 9.262358 GTTCAGAAGGATACAACCATATACTTC 57.738 37.037 8.98 8.98 46.63 3.01
2533 7252 8.768397 TGTTCAGAAGGATACAACCATATACTT 58.232 33.333 0.00 0.00 38.26 2.24
2534 7253 8.204836 GTGTTCAGAAGGATACAACCATATACT 58.795 37.037 0.00 0.00 41.41 2.12
2535 7254 8.204836 AGTGTTCAGAAGGATACAACCATATAC 58.795 37.037 0.00 0.00 41.41 1.47
2536 7255 8.319057 AGTGTTCAGAAGGATACAACCATATA 57.681 34.615 0.00 0.00 41.41 0.86
2537 7256 7.126421 AGAGTGTTCAGAAGGATACAACCATAT 59.874 37.037 0.00 0.00 41.41 1.78
2538 7257 6.440647 AGAGTGTTCAGAAGGATACAACCATA 59.559 38.462 0.00 0.00 41.41 2.74
2540 7259 4.593206 AGAGTGTTCAGAAGGATACAACCA 59.407 41.667 0.00 0.00 41.41 3.67
2541 7260 5.153950 AGAGTGTTCAGAAGGATACAACC 57.846 43.478 0.00 0.00 41.41 3.77
2543 7262 8.593679 TCATTAAGAGTGTTCAGAAGGATACAA 58.406 33.333 0.00 0.00 41.41 2.41
2544 7263 8.134202 TCATTAAGAGTGTTCAGAAGGATACA 57.866 34.615 0.00 0.00 41.41 2.29
2545 7264 9.255304 GATCATTAAGAGTGTTCAGAAGGATAC 57.745 37.037 0.00 0.00 0.00 2.24
2547 7266 8.088463 AGATCATTAAGAGTGTTCAGAAGGAT 57.912 34.615 0.00 0.00 0.00 3.24
2551 7270 8.127150 TCAGAGATCATTAAGAGTGTTCAGAA 57.873 34.615 0.00 0.00 0.00 3.02
2552 7271 7.147932 CCTCAGAGATCATTAAGAGTGTTCAGA 60.148 40.741 0.00 0.00 0.00 3.27
2553 7272 6.979817 CCTCAGAGATCATTAAGAGTGTTCAG 59.020 42.308 0.00 0.00 0.00 3.02
2554 7273 6.665248 TCCTCAGAGATCATTAAGAGTGTTCA 59.335 38.462 0.00 0.00 0.00 3.18
2555 7274 7.106439 TCCTCAGAGATCATTAAGAGTGTTC 57.894 40.000 0.00 0.00 0.00 3.18
2565 7284 8.099537 ACGCATTTATTATCCTCAGAGATCATT 58.900 33.333 0.00 0.00 0.00 2.57
2566 7285 7.619050 ACGCATTTATTATCCTCAGAGATCAT 58.381 34.615 0.00 0.00 0.00 2.45
2568 7287 7.897575 AACGCATTTATTATCCTCAGAGATC 57.102 36.000 0.00 0.00 0.00 2.75
2570 7289 9.208022 CAATAACGCATTTATTATCCTCAGAGA 57.792 33.333 0.00 0.00 38.17 3.10
2571 7290 8.993121 ACAATAACGCATTTATTATCCTCAGAG 58.007 33.333 0.00 0.00 38.17 3.35
2572 7291 8.773645 CACAATAACGCATTTATTATCCTCAGA 58.226 33.333 1.06 0.00 38.17 3.27
2574 7293 7.040755 CCCACAATAACGCATTTATTATCCTCA 60.041 37.037 1.06 0.00 38.17 3.86
2578 7297 6.861055 CCACCCACAATAACGCATTTATTATC 59.139 38.462 1.06 0.00 38.17 1.75
2579 7298 6.737346 GCCACCCACAATAACGCATTTATTAT 60.737 38.462 1.06 0.00 38.17 1.28
2580 7299 5.450688 GCCACCCACAATAACGCATTTATTA 60.451 40.000 1.06 0.00 38.17 0.98
2581 7300 4.679372 GCCACCCACAATAACGCATTTATT 60.679 41.667 0.00 0.00 40.47 1.40
2582 7301 3.181480 GCCACCCACAATAACGCATTTAT 60.181 43.478 0.00 0.00 31.07 1.40
2583 7302 2.164624 GCCACCCACAATAACGCATTTA 59.835 45.455 0.00 0.00 0.00 1.40
2585 7304 0.530288 GCCACCCACAATAACGCATT 59.470 50.000 0.00 0.00 0.00 3.56
2586 7305 0.323360 AGCCACCCACAATAACGCAT 60.323 50.000 0.00 0.00 0.00 4.73
2588 7307 0.109319 CAAGCCACCCACAATAACGC 60.109 55.000 0.00 0.00 0.00 4.84
2589 7308 1.529226 TCAAGCCACCCACAATAACG 58.471 50.000 0.00 0.00 0.00 3.18
2590 7309 3.509575 TCATTCAAGCCACCCACAATAAC 59.490 43.478 0.00 0.00 0.00 1.89
2591 7310 3.509575 GTCATTCAAGCCACCCACAATAA 59.490 43.478 0.00 0.00 0.00 1.40
2592 7311 3.088532 GTCATTCAAGCCACCCACAATA 58.911 45.455 0.00 0.00 0.00 1.90
2595 7314 0.184692 TGTCATTCAAGCCACCCACA 59.815 50.000 0.00 0.00 0.00 4.17
2597 7316 1.203038 ACATGTCATTCAAGCCACCCA 60.203 47.619 0.00 0.00 0.00 4.51
2598 7317 1.203052 CACATGTCATTCAAGCCACCC 59.797 52.381 0.00 0.00 0.00 4.61
2599 7318 2.095059 GTCACATGTCATTCAAGCCACC 60.095 50.000 0.00 0.00 0.00 4.61
2600 7319 2.553602 TGTCACATGTCATTCAAGCCAC 59.446 45.455 0.00 0.00 0.00 5.01
2605 7324 2.553602 GCCACTGTCACATGTCATTCAA 59.446 45.455 0.00 0.00 0.00 2.69
2606 7325 2.153645 GCCACTGTCACATGTCATTCA 58.846 47.619 0.00 0.00 0.00 2.57
2607 7326 1.470098 GGCCACTGTCACATGTCATTC 59.530 52.381 0.00 0.00 0.00 2.67
2608 7327 1.538047 GGCCACTGTCACATGTCATT 58.462 50.000 0.00 0.00 0.00 2.57
2610 7329 1.073025 GGGCCACTGTCACATGTCA 59.927 57.895 4.39 0.00 0.00 3.58
2613 7332 1.855213 CGTTGGGCCACTGTCACATG 61.855 60.000 5.23 0.00 0.00 3.21
2614 7333 1.600636 CGTTGGGCCACTGTCACAT 60.601 57.895 5.23 0.00 0.00 3.21
2616 7335 2.203153 ACGTTGGGCCACTGTCAC 60.203 61.111 5.23 0.00 0.00 3.67
2617 7336 2.203139 CACGTTGGGCCACTGTCA 60.203 61.111 5.23 0.00 0.00 3.58
2618 7337 3.660111 GCACGTTGGGCCACTGTC 61.660 66.667 5.23 0.00 0.00 3.51
2619 7338 3.790416 ATGCACGTTGGGCCACTGT 62.790 57.895 5.23 4.51 0.00 3.55
2621 7340 2.985282 CATGCACGTTGGGCCACT 60.985 61.111 5.23 0.00 0.00 4.00
2622 7341 4.722855 GCATGCACGTTGGGCCAC 62.723 66.667 14.21 0.00 0.00 5.01
2624 7343 4.424566 CTGCATGCACGTTGGGCC 62.425 66.667 18.46 0.00 0.00 5.80
2625 7344 2.216750 AATCTGCATGCACGTTGGGC 62.217 55.000 18.46 0.00 0.00 5.36
2626 7345 0.244450 AAATCTGCATGCACGTTGGG 59.756 50.000 18.46 6.11 0.00 4.12
2627 7346 1.722464 CAAAATCTGCATGCACGTTGG 59.278 47.619 18.46 6.94 0.00 3.77
2628 7347 2.396601 ACAAAATCTGCATGCACGTTG 58.603 42.857 18.46 18.80 0.00 4.10
2629 7348 2.796031 CAACAAAATCTGCATGCACGTT 59.204 40.909 18.46 11.60 0.00 3.99
2630 7349 2.034432 TCAACAAAATCTGCATGCACGT 59.966 40.909 18.46 5.14 0.00 4.49
2632 7351 2.410730 GCTCAACAAAATCTGCATGCAC 59.589 45.455 18.46 0.00 0.00 4.57
2633 7352 2.610976 GGCTCAACAAAATCTGCATGCA 60.611 45.455 21.29 21.29 0.00 3.96
2634 7353 1.997606 GGCTCAACAAAATCTGCATGC 59.002 47.619 11.82 11.82 0.00 4.06
2636 7355 3.057033 GTGAGGCTCAACAAAATCTGCAT 60.057 43.478 20.62 0.00 0.00 3.96
2637 7356 2.294233 GTGAGGCTCAACAAAATCTGCA 59.706 45.455 20.62 0.00 0.00 4.41
2638 7357 2.666619 CGTGAGGCTCAACAAAATCTGC 60.667 50.000 20.62 1.36 0.00 4.26
2639 7358 2.549754 ACGTGAGGCTCAACAAAATCTG 59.450 45.455 20.62 4.38 0.00 2.90
2640 7359 2.851195 ACGTGAGGCTCAACAAAATCT 58.149 42.857 20.62 0.00 0.00 2.40
2641 7360 3.626028 AACGTGAGGCTCAACAAAATC 57.374 42.857 20.62 3.73 0.00 2.17
2642 7361 4.336993 TGTAAACGTGAGGCTCAACAAAAT 59.663 37.500 20.62 6.41 0.00 1.82
2643 7362 3.690139 TGTAAACGTGAGGCTCAACAAAA 59.310 39.130 20.62 2.24 0.00 2.44
2644 7363 3.271729 TGTAAACGTGAGGCTCAACAAA 58.728 40.909 20.62 1.07 0.00 2.83
2646 7365 2.605837 TGTAAACGTGAGGCTCAACA 57.394 45.000 20.62 16.47 0.00 3.33
2647 7366 3.249013 GTTGTAAACGTGAGGCTCAAC 57.751 47.619 20.62 13.87 36.92 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.