Multiple sequence alignment - TraesCS2B01G140900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G140900 chr2B 100.000 2898 0 0 1 2898 107530677 107533574 0.000000e+00 5352.0
1 TraesCS2B01G140900 chr2B 87.150 856 75 6 1385 2215 107081405 107080560 0.000000e+00 939.0
2 TraesCS2B01G140900 chr2B 87.731 595 55 7 771 1358 107085497 107084914 0.000000e+00 678.0
3 TraesCS2B01G140900 chr2B 77.483 453 59 21 822 1242 107576754 107577195 6.250000e-57 231.0
4 TraesCS2B01G140900 chr2B 96.124 129 5 0 552 680 378986032 378986160 8.140000e-51 211.0
5 TraesCS2B01G140900 chr2B 80.833 240 28 11 768 1002 107782949 107783175 3.840000e-39 172.0
6 TraesCS2B01G140900 chr2B 91.071 112 10 0 1809 1920 107521533 107521644 5.000000e-33 152.0
7 TraesCS2B01G140900 chr2A 91.353 1966 101 25 768 2688 70193016 70194957 0.000000e+00 2625.0
8 TraesCS2B01G140900 chr2A 95.735 211 9 0 2688 2898 70194988 70195198 9.950000e-90 340.0
9 TraesCS2B01G140900 chr2A 92.045 176 12 2 169 342 389221182 389221007 2.230000e-61 246.0
10 TraesCS2B01G140900 chr2A 76.608 513 73 26 768 1248 70654817 70655314 3.730000e-59 239.0
11 TraesCS2B01G140900 chr2A 94.074 135 8 0 546 680 75138362 75138496 3.790000e-49 206.0
12 TraesCS2B01G140900 chr2A 80.349 229 22 11 768 984 70643754 70643971 5.000000e-33 152.0
13 TraesCS2B01G140900 chr2D 90.639 1955 95 21 768 2688 71391147 71393047 0.000000e+00 2516.0
14 TraesCS2B01G140900 chr2D 89.826 747 59 3 1486 2215 70795887 70795141 0.000000e+00 942.0
15 TraesCS2B01G140900 chr2D 90.118 678 49 6 767 1438 70796641 70795976 0.000000e+00 865.0
16 TraesCS2B01G140900 chr2D 95.775 213 9 0 2686 2898 71393076 71393288 7.690000e-91 344.0
17 TraesCS2B01G140900 chr2D 93.373 166 11 0 177 342 161648026 161647861 2.230000e-61 246.0
18 TraesCS2B01G140900 chr2D 91.954 174 14 0 174 347 593801764 593801591 8.020000e-61 244.0
19 TraesCS2B01G140900 chr2D 77.778 396 66 16 1015 1394 71594270 71594659 1.050000e-54 224.0
20 TraesCS2B01G140900 chr2D 96.899 129 4 0 552 680 592468111 592467983 1.750000e-52 217.0
21 TraesCS2B01G140900 chr2D 96.124 129 4 1 552 680 601909048 601909175 2.930000e-50 209.0
22 TraesCS2B01G140900 chr2D 74.902 510 74 22 768 1248 71598635 71599119 1.770000e-42 183.0
23 TraesCS2B01G140900 chr2D 94.595 111 6 0 2788 2898 70794600 70794490 3.840000e-39 172.0
24 TraesCS2B01G140900 chr2D 88.722 133 14 1 768 900 71578114 71578245 8.310000e-36 161.0
25 TraesCS2B01G140900 chr2D 81.690 142 16 4 768 899 71469760 71469901 3.050000e-20 110.0
26 TraesCS2B01G140900 chr2D 88.750 80 8 1 477 555 71353869 71353948 2.380000e-16 97.1
27 TraesCS2B01G140900 chr3D 93.452 168 11 0 176 343 6024470 6024303 1.720000e-62 250.0
28 TraesCS2B01G140900 chr3D 92.000 175 13 1 171 344 550509604 550509430 8.020000e-61 244.0
29 TraesCS2B01G140900 chr3D 96.124 129 4 1 552 680 411511626 411511499 2.930000e-50 209.0
30 TraesCS2B01G140900 chr3D 77.083 192 22 13 363 553 38165297 38165127 1.110000e-14 91.6
31 TraesCS2B01G140900 chr1D 93.491 169 10 1 178 345 140136981 140137149 1.720000e-62 250.0
32 TraesCS2B01G140900 chr1D 86.979 192 22 3 177 367 433207170 433207359 2.260000e-51 213.0
33 TraesCS2B01G140900 chr1D 96.124 129 5 0 552 680 116238379 116238507 8.140000e-51 211.0
34 TraesCS2B01G140900 chr4A 92.941 170 12 0 176 345 428284285 428284116 6.200000e-62 248.0
35 TraesCS2B01G140900 chr4D 92.899 169 12 0 176 344 93336682 93336850 2.230000e-61 246.0
36 TraesCS2B01G140900 chr4D 96.124 129 4 1 552 680 344231967 344231840 2.930000e-50 209.0
37 TraesCS2B01G140900 chr6D 91.860 172 14 0 171 342 41542657 41542486 1.040000e-59 241.0
38 TraesCS2B01G140900 chr3B 96.875 128 3 1 553 680 793003111 793003237 2.260000e-51 213.0
39 TraesCS2B01G140900 chr3B 96.124 129 5 0 552 680 48860813 48860685 8.140000e-51 211.0
40 TraesCS2B01G140900 chr3B 86.585 82 5 3 473 553 60774188 60774112 5.150000e-13 86.1
41 TraesCS2B01G140900 chr3B 85.366 82 6 3 473 553 60854302 60854226 2.390000e-11 80.5
42 TraesCS2B01G140900 chr6A 86.667 165 21 1 178 342 474996804 474996967 6.380000e-42 182.0
43 TraesCS2B01G140900 chr5D 83.246 191 30 2 172 361 416259802 416259991 1.070000e-39 174.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G140900 chr2B 107530677 107533574 2897 False 5352.000000 5352 100.0000 1 2898 1 chr2B.!!$F2 2897
1 TraesCS2B01G140900 chr2B 107080560 107085497 4937 True 808.500000 939 87.4405 771 2215 2 chr2B.!!$R1 1444
2 TraesCS2B01G140900 chr2A 70193016 70195198 2182 False 1482.500000 2625 93.5440 768 2898 2 chr2A.!!$F4 2130
3 TraesCS2B01G140900 chr2D 71391147 71393288 2141 False 1430.000000 2516 93.2070 768 2898 2 chr2D.!!$F5 2130
4 TraesCS2B01G140900 chr2D 70794490 70796641 2151 True 659.666667 942 91.5130 767 2898 3 chr2D.!!$R4 2131
5 TraesCS2B01G140900 chr2D 71594270 71599119 4849 False 203.500000 224 76.3400 768 1394 2 chr2D.!!$F6 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.032952 CAAACCCGACTCCGACTGAA 59.967 55.0 0.0 0.0 38.22 3.02 F
748 749 0.108585 GGCAGGATAGAATCGGGCAA 59.891 55.0 0.0 0.0 32.67 4.52 F
820 825 0.179054 GGAACCCGAATCCACTAGGC 60.179 60.0 0.0 0.0 36.92 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1331 1367 0.320247 GGATCCAGATACAGCCGCAG 60.320 60.000 6.95 0.0 0.00 5.18 R
1696 5267 0.618458 TTAGCAGGATGAAGGGCGTT 59.382 50.000 0.00 0.0 39.69 4.84 R
2393 6183 2.043526 ACCCAGCCCTTTGAAATCTGAT 59.956 45.455 4.34 0.0 0.00 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.897259 TCGTTTCCGAGTCCATTTTAATAG 57.103 37.500 0.00 0.00 38.40 1.73
27 28 5.813672 TCGTTTCCGAGTCCATTTTAATAGG 59.186 40.000 0.00 0.00 38.40 2.57
28 29 5.007332 CGTTTCCGAGTCCATTTTAATAGGG 59.993 44.000 0.00 0.00 35.63 3.53
29 30 5.703730 TTCCGAGTCCATTTTAATAGGGT 57.296 39.130 0.00 0.00 0.00 4.34
30 31 5.031066 TCCGAGTCCATTTTAATAGGGTG 57.969 43.478 0.00 0.00 0.00 4.61
31 32 3.564225 CCGAGTCCATTTTAATAGGGTGC 59.436 47.826 0.00 0.00 0.00 5.01
32 33 4.451900 CGAGTCCATTTTAATAGGGTGCT 58.548 43.478 0.00 0.00 0.00 4.40
33 34 4.273480 CGAGTCCATTTTAATAGGGTGCTG 59.727 45.833 0.00 0.00 0.00 4.41
34 35 5.193099 AGTCCATTTTAATAGGGTGCTGT 57.807 39.130 0.00 0.00 0.00 4.40
35 36 6.321821 AGTCCATTTTAATAGGGTGCTGTA 57.678 37.500 0.00 0.00 0.00 2.74
36 37 6.727394 AGTCCATTTTAATAGGGTGCTGTAA 58.273 36.000 0.00 0.00 0.00 2.41
37 38 6.828785 AGTCCATTTTAATAGGGTGCTGTAAG 59.171 38.462 0.00 0.00 0.00 2.34
38 39 6.826741 GTCCATTTTAATAGGGTGCTGTAAGA 59.173 38.462 0.00 0.00 34.07 2.10
39 40 7.502561 GTCCATTTTAATAGGGTGCTGTAAGAT 59.497 37.037 0.00 0.00 34.07 2.40
40 41 8.719596 TCCATTTTAATAGGGTGCTGTAAGATA 58.280 33.333 0.00 0.00 34.07 1.98
41 42 9.349713 CCATTTTAATAGGGTGCTGTAAGATAA 57.650 33.333 0.00 0.00 34.07 1.75
48 49 6.759497 AGGGTGCTGTAAGATAATTTCAAC 57.241 37.500 0.00 0.00 34.07 3.18
49 50 6.245408 AGGGTGCTGTAAGATAATTTCAACA 58.755 36.000 0.00 0.00 34.07 3.33
50 51 6.891908 AGGGTGCTGTAAGATAATTTCAACAT 59.108 34.615 0.00 0.00 34.07 2.71
51 52 7.067494 AGGGTGCTGTAAGATAATTTCAACATC 59.933 37.037 0.00 0.00 34.07 3.06
52 53 7.196331 GGTGCTGTAAGATAATTTCAACATCC 58.804 38.462 0.00 0.00 34.07 3.51
53 54 7.148086 GGTGCTGTAAGATAATTTCAACATCCA 60.148 37.037 0.00 0.00 34.07 3.41
54 55 8.243426 GTGCTGTAAGATAATTTCAACATCCAA 58.757 33.333 0.00 0.00 34.07 3.53
55 56 8.801299 TGCTGTAAGATAATTTCAACATCCAAA 58.199 29.630 0.00 0.00 34.07 3.28
56 57 9.076596 GCTGTAAGATAATTTCAACATCCAAAC 57.923 33.333 0.00 0.00 34.07 2.93
58 59 9.906660 TGTAAGATAATTTCAACATCCAAACAC 57.093 29.630 0.00 0.00 0.00 3.32
59 60 9.906660 GTAAGATAATTTCAACATCCAAACACA 57.093 29.630 0.00 0.00 0.00 3.72
62 63 9.426837 AGATAATTTCAACATCCAAACACAATG 57.573 29.630 0.00 0.00 0.00 2.82
63 64 5.927954 ATTTCAACATCCAAACACAATGC 57.072 34.783 0.00 0.00 0.00 3.56
64 65 3.010624 TCAACATCCAAACACAATGCG 57.989 42.857 0.00 0.00 0.00 4.73
65 66 2.620585 TCAACATCCAAACACAATGCGA 59.379 40.909 0.00 0.00 0.00 5.10
66 67 3.255395 TCAACATCCAAACACAATGCGAT 59.745 39.130 0.00 0.00 0.00 4.58
67 68 3.492421 ACATCCAAACACAATGCGATC 57.508 42.857 0.00 0.00 0.00 3.69
68 69 2.164219 ACATCCAAACACAATGCGATCC 59.836 45.455 0.00 0.00 0.00 3.36
69 70 1.902938 TCCAAACACAATGCGATCCA 58.097 45.000 0.00 0.00 0.00 3.41
70 71 2.234143 TCCAAACACAATGCGATCCAA 58.766 42.857 0.00 0.00 0.00 3.53
71 72 2.625314 TCCAAACACAATGCGATCCAAA 59.375 40.909 0.00 0.00 0.00 3.28
72 73 2.730928 CCAAACACAATGCGATCCAAAC 59.269 45.455 0.00 0.00 0.00 2.93
73 74 2.723124 AACACAATGCGATCCAAACC 57.277 45.000 0.00 0.00 0.00 3.27
74 75 0.887933 ACACAATGCGATCCAAACCC 59.112 50.000 0.00 0.00 0.00 4.11
75 76 0.179166 CACAATGCGATCCAAACCCG 60.179 55.000 0.00 0.00 0.00 5.28
76 77 0.322098 ACAATGCGATCCAAACCCGA 60.322 50.000 0.00 0.00 0.00 5.14
77 78 0.098728 CAATGCGATCCAAACCCGAC 59.901 55.000 0.00 0.00 0.00 4.79
78 79 0.035439 AATGCGATCCAAACCCGACT 60.035 50.000 0.00 0.00 0.00 4.18
79 80 0.462047 ATGCGATCCAAACCCGACTC 60.462 55.000 0.00 0.00 0.00 3.36
80 81 1.814169 GCGATCCAAACCCGACTCC 60.814 63.158 0.00 0.00 0.00 3.85
81 82 1.518572 CGATCCAAACCCGACTCCG 60.519 63.158 0.00 0.00 0.00 4.63
82 83 1.895238 GATCCAAACCCGACTCCGA 59.105 57.895 0.00 0.00 38.22 4.55
83 84 0.459759 GATCCAAACCCGACTCCGAC 60.460 60.000 0.00 0.00 38.22 4.79
84 85 0.903454 ATCCAAACCCGACTCCGACT 60.903 55.000 0.00 0.00 38.22 4.18
85 86 1.374252 CCAAACCCGACTCCGACTG 60.374 63.158 0.00 0.00 38.22 3.51
86 87 1.663739 CAAACCCGACTCCGACTGA 59.336 57.895 0.00 0.00 38.22 3.41
87 88 0.032952 CAAACCCGACTCCGACTGAA 59.967 55.000 0.00 0.00 38.22 3.02
88 89 0.754472 AAACCCGACTCCGACTGAAA 59.246 50.000 0.00 0.00 38.22 2.69
89 90 0.317479 AACCCGACTCCGACTGAAAG 59.683 55.000 0.00 0.00 42.29 2.62
90 91 1.215647 CCCGACTCCGACTGAAAGG 59.784 63.158 0.00 0.00 39.30 3.11
91 92 1.248785 CCCGACTCCGACTGAAAGGA 61.249 60.000 0.00 0.00 39.30 3.36
92 93 0.818296 CCGACTCCGACTGAAAGGAT 59.182 55.000 0.00 0.00 39.30 3.24
93 94 2.022195 CCGACTCCGACTGAAAGGATA 58.978 52.381 0.00 0.00 39.30 2.59
94 95 2.223525 CCGACTCCGACTGAAAGGATAC 60.224 54.545 0.00 0.00 39.30 2.24
95 96 2.539142 CGACTCCGACTGAAAGGATACG 60.539 54.545 0.00 0.00 39.30 3.06
96 97 1.749634 ACTCCGACTGAAAGGATACGG 59.250 52.381 0.00 0.00 46.39 4.02
97 98 1.749634 CTCCGACTGAAAGGATACGGT 59.250 52.381 0.00 0.00 46.39 4.83
98 99 2.947652 CTCCGACTGAAAGGATACGGTA 59.052 50.000 0.00 0.00 46.39 4.02
99 100 3.559069 TCCGACTGAAAGGATACGGTAT 58.441 45.455 0.00 0.00 46.39 2.73
100 101 4.717877 TCCGACTGAAAGGATACGGTATA 58.282 43.478 0.00 0.00 46.39 1.47
101 102 5.132502 TCCGACTGAAAGGATACGGTATAA 58.867 41.667 0.00 0.00 46.39 0.98
102 103 5.240183 TCCGACTGAAAGGATACGGTATAAG 59.760 44.000 0.00 0.00 46.39 1.73
103 104 5.240183 CCGACTGAAAGGATACGGTATAAGA 59.760 44.000 0.00 0.00 46.39 2.10
104 105 6.072064 CCGACTGAAAGGATACGGTATAAGAT 60.072 42.308 0.00 0.00 46.39 2.40
105 106 7.120285 CCGACTGAAAGGATACGGTATAAGATA 59.880 40.741 0.00 0.00 46.39 1.98
106 107 8.675504 CGACTGAAAGGATACGGTATAAGATAT 58.324 37.037 0.00 0.00 46.39 1.63
107 108 9.790389 GACTGAAAGGATACGGTATAAGATATG 57.210 37.037 0.00 0.00 46.39 1.78
108 109 9.529823 ACTGAAAGGATACGGTATAAGATATGA 57.470 33.333 0.00 0.00 46.39 2.15
151 152 6.891975 CGTAGGATAAGTCGTTTATTCGAG 57.108 41.667 0.00 0.00 40.52 4.04
152 153 5.339085 CGTAGGATAAGTCGTTTATTCGAGC 59.661 44.000 0.00 0.00 40.52 5.03
153 154 4.618965 AGGATAAGTCGTTTATTCGAGCC 58.381 43.478 0.00 0.00 40.52 4.70
154 155 4.098960 AGGATAAGTCGTTTATTCGAGCCA 59.901 41.667 0.00 0.00 40.52 4.75
155 156 4.444720 GGATAAGTCGTTTATTCGAGCCAG 59.555 45.833 0.00 0.00 40.52 4.85
156 157 3.587797 AAGTCGTTTATTCGAGCCAGA 57.412 42.857 0.00 0.00 40.52 3.86
157 158 3.802948 AGTCGTTTATTCGAGCCAGAT 57.197 42.857 0.00 0.00 40.52 2.90
158 159 4.913335 AGTCGTTTATTCGAGCCAGATA 57.087 40.909 0.00 0.00 40.52 1.98
159 160 5.258456 AGTCGTTTATTCGAGCCAGATAA 57.742 39.130 0.00 0.00 40.52 1.75
160 161 5.844004 AGTCGTTTATTCGAGCCAGATAAT 58.156 37.500 0.00 0.00 40.52 1.28
161 162 5.921408 AGTCGTTTATTCGAGCCAGATAATC 59.079 40.000 0.00 0.00 40.52 1.75
162 163 5.118817 GTCGTTTATTCGAGCCAGATAATCC 59.881 44.000 0.00 0.00 40.52 3.01
163 164 4.090066 CGTTTATTCGAGCCAGATAATCCG 59.910 45.833 0.00 0.00 0.00 4.18
164 165 5.227908 GTTTATTCGAGCCAGATAATCCGA 58.772 41.667 0.00 0.00 0.00 4.55
165 166 5.661056 TTATTCGAGCCAGATAATCCGAT 57.339 39.130 0.00 0.00 0.00 4.18
166 167 3.577649 TTCGAGCCAGATAATCCGATC 57.422 47.619 0.00 0.00 0.00 3.69
167 168 1.819288 TCGAGCCAGATAATCCGATCC 59.181 52.381 0.00 0.00 0.00 3.36
168 169 1.821753 CGAGCCAGATAATCCGATCCT 59.178 52.381 0.00 0.00 0.00 3.24
169 170 2.232452 CGAGCCAGATAATCCGATCCTT 59.768 50.000 0.00 0.00 0.00 3.36
170 171 3.306364 CGAGCCAGATAATCCGATCCTTT 60.306 47.826 0.00 0.00 0.00 3.11
171 172 4.082190 CGAGCCAGATAATCCGATCCTTTA 60.082 45.833 0.00 0.00 0.00 1.85
172 173 5.566826 CGAGCCAGATAATCCGATCCTTTAA 60.567 44.000 0.00 0.00 0.00 1.52
173 174 6.187727 AGCCAGATAATCCGATCCTTTAAA 57.812 37.500 0.00 0.00 0.00 1.52
174 175 6.601332 AGCCAGATAATCCGATCCTTTAAAA 58.399 36.000 0.00 0.00 0.00 1.52
175 176 7.060421 AGCCAGATAATCCGATCCTTTAAAAA 58.940 34.615 0.00 0.00 0.00 1.94
198 199 9.916360 AAAAATACTCCCTCCGTTTCTAAATAT 57.084 29.630 0.00 0.00 0.00 1.28
202 203 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
203 204 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
204 205 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
205 206 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
206 207 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
207 208 9.043079 CCCTCCGTTTCTAAATATAAGTCTTTC 57.957 37.037 0.00 0.00 0.00 2.62
208 209 9.819267 CCTCCGTTTCTAAATATAAGTCTTTCT 57.181 33.333 0.00 0.00 0.00 2.52
223 224 9.883142 ATAAGTCTTTCTAGAGATTCCAACAAG 57.117 33.333 0.00 0.00 0.00 3.16
224 225 7.309770 AGTCTTTCTAGAGATTCCAACAAGT 57.690 36.000 0.00 0.00 0.00 3.16
225 226 7.158021 AGTCTTTCTAGAGATTCCAACAAGTG 58.842 38.462 0.00 0.00 0.00 3.16
237 238 3.937814 CCAACAAGTGGCTACATACAGA 58.062 45.455 2.02 0.00 41.72 3.41
238 239 3.935203 CCAACAAGTGGCTACATACAGAG 59.065 47.826 2.02 0.00 41.72 3.35
239 240 3.252974 ACAAGTGGCTACATACAGAGC 57.747 47.619 2.02 0.00 38.00 4.09
240 241 2.567169 ACAAGTGGCTACATACAGAGCA 59.433 45.455 2.02 0.00 40.64 4.26
241 242 3.007940 ACAAGTGGCTACATACAGAGCAA 59.992 43.478 2.02 0.00 40.64 3.91
242 243 3.981071 AGTGGCTACATACAGAGCAAA 57.019 42.857 2.02 0.00 40.64 3.68
243 244 4.286297 AGTGGCTACATACAGAGCAAAA 57.714 40.909 2.02 0.00 40.64 2.44
244 245 4.848357 AGTGGCTACATACAGAGCAAAAT 58.152 39.130 2.02 0.00 40.64 1.82
245 246 4.637534 AGTGGCTACATACAGAGCAAAATG 59.362 41.667 2.02 0.00 40.64 2.32
246 247 4.635765 GTGGCTACATACAGAGCAAAATGA 59.364 41.667 0.00 0.00 40.64 2.57
247 248 5.123820 GTGGCTACATACAGAGCAAAATGAA 59.876 40.000 0.00 0.00 40.64 2.57
248 249 5.123820 TGGCTACATACAGAGCAAAATGAAC 59.876 40.000 0.00 0.00 40.64 3.18
249 250 5.258622 GCTACATACAGAGCAAAATGAACG 58.741 41.667 0.00 0.00 38.62 3.95
250 251 5.063438 GCTACATACAGAGCAAAATGAACGA 59.937 40.000 0.00 0.00 38.62 3.85
251 252 5.940192 ACATACAGAGCAAAATGAACGAA 57.060 34.783 0.00 0.00 0.00 3.85
252 253 6.500684 ACATACAGAGCAAAATGAACGAAT 57.499 33.333 0.00 0.00 0.00 3.34
253 254 6.546395 ACATACAGAGCAAAATGAACGAATC 58.454 36.000 0.00 0.00 0.00 2.52
254 255 6.372659 ACATACAGAGCAAAATGAACGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
255 256 7.549134 ACATACAGAGCAAAATGAACGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
256 257 6.170675 ACAGAGCAAAATGAACGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
257 258 5.700832 ACAGAGCAAAATGAACGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
258 259 6.017933 CAGAGCAAAATGAACGAATCTACAC 58.982 40.000 0.00 0.00 0.00 2.90
259 260 5.934625 AGAGCAAAATGAACGAATCTACACT 59.065 36.000 0.00 0.00 0.00 3.55
260 261 6.091441 AGAGCAAAATGAACGAATCTACACTC 59.909 38.462 0.00 0.00 0.00 3.51
261 262 5.934625 AGCAAAATGAACGAATCTACACTCT 59.065 36.000 0.00 0.00 0.00 3.24
262 263 7.097192 AGCAAAATGAACGAATCTACACTCTA 58.903 34.615 0.00 0.00 0.00 2.43
263 264 7.602644 AGCAAAATGAACGAATCTACACTCTAA 59.397 33.333 0.00 0.00 0.00 2.10
264 265 8.227791 GCAAAATGAACGAATCTACACTCTAAA 58.772 33.333 0.00 0.00 0.00 1.85
307 308 9.748708 CCATATGTTGTAGTCCATTTAAAATGG 57.251 33.333 0.00 0.00 40.48 3.16
308 309 9.248291 CATATGTTGTAGTCCATTTAAAATGGC 57.752 33.333 0.00 0.00 39.01 4.40
309 310 6.909550 TGTTGTAGTCCATTTAAAATGGCT 57.090 33.333 0.00 2.31 39.01 4.75
310 311 8.588290 ATGTTGTAGTCCATTTAAAATGGCTA 57.412 30.769 0.00 1.25 39.01 3.93
311 312 8.410673 TGTTGTAGTCCATTTAAAATGGCTAA 57.589 30.769 0.00 0.00 39.01 3.09
312 313 8.861086 TGTTGTAGTCCATTTAAAATGGCTAAA 58.139 29.630 0.00 0.00 39.01 1.85
313 314 9.699703 GTTGTAGTCCATTTAAAATGGCTAAAA 57.300 29.630 0.00 3.05 39.01 1.52
315 316 9.921637 TGTAGTCCATTTAAAATGGCTAAAAAG 57.078 29.630 0.00 0.00 39.01 2.27
318 319 8.870116 AGTCCATTTAAAATGGCTAAAAAGACT 58.130 29.630 10.61 10.61 39.01 3.24
319 320 9.489084 GTCCATTTAAAATGGCTAAAAAGACTT 57.511 29.630 0.00 0.00 39.01 3.01
331 332 9.623000 TGGCTAAAAAGACTTATATTTAGGACC 57.377 33.333 15.06 10.92 36.39 4.46
332 333 8.771766 GGCTAAAAAGACTTATATTTAGGACCG 58.228 37.037 15.06 0.00 36.39 4.79
333 334 8.771766 GCTAAAAAGACTTATATTTAGGACCGG 58.228 37.037 15.06 0.00 36.39 5.28
335 336 8.959705 AAAAAGACTTATATTTAGGACCGGAG 57.040 34.615 9.46 0.00 0.00 4.63
351 352 3.063510 CGGAGGGAGTATACGGATACA 57.936 52.381 19.86 0.00 40.51 2.29
352 353 2.746362 CGGAGGGAGTATACGGATACAC 59.254 54.545 19.86 13.29 40.51 2.90
353 354 3.759581 GGAGGGAGTATACGGATACACA 58.240 50.000 19.86 0.00 40.51 3.72
354 355 3.505293 GGAGGGAGTATACGGATACACAC 59.495 52.174 19.86 14.61 40.51 3.82
355 356 4.396522 GAGGGAGTATACGGATACACACT 58.603 47.826 18.63 18.63 43.23 3.55
356 357 4.801164 AGGGAGTATACGGATACACACTT 58.199 43.478 19.86 3.21 39.12 3.16
357 358 5.206587 AGGGAGTATACGGATACACACTTT 58.793 41.667 19.86 0.00 39.12 2.66
358 359 6.367983 AGGGAGTATACGGATACACACTTTA 58.632 40.000 19.86 0.00 39.12 1.85
359 360 7.008941 AGGGAGTATACGGATACACACTTTAT 58.991 38.462 19.86 0.00 39.12 1.40
360 361 7.508296 AGGGAGTATACGGATACACACTTTATT 59.492 37.037 19.86 0.00 39.12 1.40
361 362 8.146412 GGGAGTATACGGATACACACTTTATTT 58.854 37.037 19.86 0.00 40.51 1.40
362 363 8.975439 GGAGTATACGGATACACACTTTATTTG 58.025 37.037 19.86 0.00 40.51 2.32
363 364 9.525409 GAGTATACGGATACACACTTTATTTGT 57.475 33.333 19.86 0.00 40.51 2.83
369 370 9.059260 ACGGATACACACTTTATTTGTAAAGTT 57.941 29.630 10.05 1.44 45.05 2.66
370 371 9.887406 CGGATACACACTTTATTTGTAAAGTTT 57.113 29.630 10.05 3.15 45.05 2.66
406 407 9.630098 ATTAGCAAAGTGTGAATGTTATCTTTG 57.370 29.630 9.97 9.97 42.23 2.77
409 410 7.329438 CAAAGTGTGAATGTTATCTTTGCTG 57.671 36.000 0.00 0.00 36.56 4.41
410 411 6.882610 AAGTGTGAATGTTATCTTTGCTGA 57.117 33.333 0.00 0.00 0.00 4.26
411 412 6.246420 AGTGTGAATGTTATCTTTGCTGAC 57.754 37.500 0.00 0.00 0.00 3.51
412 413 5.082059 GTGTGAATGTTATCTTTGCTGACG 58.918 41.667 0.00 0.00 0.00 4.35
413 414 4.994217 TGTGAATGTTATCTTTGCTGACGA 59.006 37.500 0.00 0.00 0.00 4.20
414 415 5.120674 TGTGAATGTTATCTTTGCTGACGAG 59.879 40.000 0.00 0.00 0.00 4.18
415 416 5.348724 GTGAATGTTATCTTTGCTGACGAGA 59.651 40.000 0.00 0.00 0.00 4.04
416 417 5.348724 TGAATGTTATCTTTGCTGACGAGAC 59.651 40.000 0.00 0.00 0.00 3.36
417 418 3.242518 TGTTATCTTTGCTGACGAGACG 58.757 45.455 0.00 0.00 0.00 4.18
418 419 3.057806 TGTTATCTTTGCTGACGAGACGA 60.058 43.478 0.00 0.00 0.00 4.20
419 420 2.724977 ATCTTTGCTGACGAGACGAA 57.275 45.000 0.00 0.00 0.00 3.85
420 421 2.502213 TCTTTGCTGACGAGACGAAA 57.498 45.000 0.00 0.00 0.00 3.46
421 422 2.124903 TCTTTGCTGACGAGACGAAAC 58.875 47.619 0.00 0.00 0.00 2.78
422 423 0.850217 TTTGCTGACGAGACGAAACG 59.150 50.000 0.00 0.00 0.00 3.60
423 424 0.248743 TTGCTGACGAGACGAAACGT 60.249 50.000 0.00 0.00 45.10 3.99
424 425 0.587768 TGCTGACGAGACGAAACGTA 59.412 50.000 0.00 0.00 41.37 3.57
425 426 1.002576 TGCTGACGAGACGAAACGTAA 60.003 47.619 0.00 0.00 41.37 3.18
426 427 1.642843 GCTGACGAGACGAAACGTAAG 59.357 52.381 10.97 10.97 41.37 2.34
427 428 1.642843 CTGACGAGACGAAACGTAAGC 59.357 52.381 0.00 0.00 41.37 3.09
428 429 1.265095 TGACGAGACGAAACGTAAGCT 59.735 47.619 0.00 0.00 41.37 3.74
429 430 1.903775 GACGAGACGAAACGTAAGCTC 59.096 52.381 0.00 0.00 41.37 4.09
430 431 1.265095 ACGAGACGAAACGTAAGCTCA 59.735 47.619 0.00 0.00 41.37 4.26
431 432 2.095364 ACGAGACGAAACGTAAGCTCAT 60.095 45.455 0.00 0.00 41.37 2.90
432 433 2.915463 CGAGACGAAACGTAAGCTCATT 59.085 45.455 0.00 0.00 41.37 2.57
433 434 4.093514 CGAGACGAAACGTAAGCTCATTA 58.906 43.478 0.00 0.00 41.37 1.90
434 435 4.028670 CGAGACGAAACGTAAGCTCATTAC 60.029 45.833 0.00 0.00 41.37 1.89
435 436 5.056894 AGACGAAACGTAAGCTCATTACT 57.943 39.130 0.00 0.00 41.37 2.24
436 437 6.187125 AGACGAAACGTAAGCTCATTACTA 57.813 37.500 0.00 0.00 41.37 1.82
437 438 6.615088 AGACGAAACGTAAGCTCATTACTAA 58.385 36.000 0.00 0.00 41.37 2.24
438 439 7.256286 AGACGAAACGTAAGCTCATTACTAAT 58.744 34.615 0.00 0.00 41.37 1.73
439 440 8.400947 AGACGAAACGTAAGCTCATTACTAATA 58.599 33.333 0.00 0.00 41.37 0.98
440 441 8.332777 ACGAAACGTAAGCTCATTACTAATAC 57.667 34.615 0.00 0.00 41.46 1.89
441 442 8.186821 ACGAAACGTAAGCTCATTACTAATACT 58.813 33.333 0.00 0.00 41.46 2.12
442 443 8.680261 CGAAACGTAAGCTCATTACTAATACTC 58.320 37.037 0.00 0.00 41.46 2.59
443 444 9.733219 GAAACGTAAGCTCATTACTAATACTCT 57.267 33.333 0.00 0.00 41.46 3.24
479 480 9.740710 ATCTGGTTTATTTTAGCACTACTTTCT 57.259 29.630 0.00 0.00 0.00 2.52
493 494 7.891183 CACTACTTTCTAGTGCTTTATGTGT 57.109 36.000 0.00 0.00 38.51 3.72
494 495 7.733608 CACTACTTTCTAGTGCTTTATGTGTG 58.266 38.462 0.00 0.00 38.51 3.82
495 496 7.385205 CACTACTTTCTAGTGCTTTATGTGTGT 59.615 37.037 0.00 0.00 38.51 3.72
496 497 7.931948 ACTACTTTCTAGTGCTTTATGTGTGTT 59.068 33.333 0.00 0.00 35.78 3.32
497 498 7.568199 ACTTTCTAGTGCTTTATGTGTGTTT 57.432 32.000 0.00 0.00 31.99 2.83
498 499 8.671384 ACTTTCTAGTGCTTTATGTGTGTTTA 57.329 30.769 0.00 0.00 31.99 2.01
499 500 9.116067 ACTTTCTAGTGCTTTATGTGTGTTTAA 57.884 29.630 0.00 0.00 31.99 1.52
500 501 9.944663 CTTTCTAGTGCTTTATGTGTGTTTAAA 57.055 29.630 0.00 0.00 0.00 1.52
501 502 9.944663 TTTCTAGTGCTTTATGTGTGTTTAAAG 57.055 29.630 0.00 0.00 38.09 1.85
502 503 8.671384 TCTAGTGCTTTATGTGTGTTTAAAGT 57.329 30.769 0.00 0.00 37.60 2.66
503 504 8.556194 TCTAGTGCTTTATGTGTGTTTAAAGTG 58.444 33.333 0.00 0.00 37.60 3.16
504 505 7.095695 AGTGCTTTATGTGTGTTTAAAGTGT 57.904 32.000 0.00 0.00 37.60 3.55
505 506 8.215926 AGTGCTTTATGTGTGTTTAAAGTGTA 57.784 30.769 0.00 0.00 37.60 2.90
506 507 8.126700 AGTGCTTTATGTGTGTTTAAAGTGTAC 58.873 33.333 0.00 0.00 37.60 2.90
507 508 7.911205 GTGCTTTATGTGTGTTTAAAGTGTACA 59.089 33.333 0.00 0.00 37.60 2.90
508 509 8.459635 TGCTTTATGTGTGTTTAAAGTGTACAA 58.540 29.630 0.00 0.00 37.60 2.41
509 510 8.953990 GCTTTATGTGTGTTTAAAGTGTACAAG 58.046 33.333 0.00 0.00 37.60 3.16
510 511 9.997482 CTTTATGTGTGTTTAAAGTGTACAAGT 57.003 29.630 0.00 0.00 32.98 3.16
511 512 9.776158 TTTATGTGTGTTTAAAGTGTACAAGTG 57.224 29.630 0.00 0.00 0.00 3.16
512 513 6.804770 TGTGTGTTTAAAGTGTACAAGTGT 57.195 33.333 0.00 0.00 0.00 3.55
513 514 7.204496 TGTGTGTTTAAAGTGTACAAGTGTT 57.796 32.000 0.00 0.00 0.00 3.32
514 515 8.320396 TGTGTGTTTAAAGTGTACAAGTGTTA 57.680 30.769 0.00 0.00 0.00 2.41
515 516 8.781196 TGTGTGTTTAAAGTGTACAAGTGTTAA 58.219 29.630 0.00 0.00 0.00 2.01
516 517 9.777575 GTGTGTTTAAAGTGTACAAGTGTTAAT 57.222 29.630 0.00 0.00 0.00 1.40
532 533 8.630054 AAGTGTTAATACTTGGCTATTGTTCA 57.370 30.769 15.88 0.00 39.33 3.18
533 534 8.807948 AGTGTTAATACTTGGCTATTGTTCAT 57.192 30.769 0.00 0.00 0.00 2.57
534 535 8.677300 AGTGTTAATACTTGGCTATTGTTCATG 58.323 33.333 0.00 0.00 0.00 3.07
535 536 8.458843 GTGTTAATACTTGGCTATTGTTCATGT 58.541 33.333 0.00 0.00 0.00 3.21
536 537 9.674068 TGTTAATACTTGGCTATTGTTCATGTA 57.326 29.630 0.00 0.00 0.00 2.29
542 543 8.807948 ACTTGGCTATTGTTCATGTATAAGTT 57.192 30.769 0.00 0.00 0.00 2.66
543 544 9.243105 ACTTGGCTATTGTTCATGTATAAGTTT 57.757 29.630 0.00 0.00 0.00 2.66
544 545 9.507280 CTTGGCTATTGTTCATGTATAAGTTTG 57.493 33.333 0.00 0.00 0.00 2.93
545 546 7.479980 TGGCTATTGTTCATGTATAAGTTTGC 58.520 34.615 0.00 0.00 0.00 3.68
546 547 7.339212 TGGCTATTGTTCATGTATAAGTTTGCT 59.661 33.333 0.00 0.00 0.00 3.91
547 548 8.190784 GGCTATTGTTCATGTATAAGTTTGCTT 58.809 33.333 0.00 0.00 38.66 3.91
548 549 9.573133 GCTATTGTTCATGTATAAGTTTGCTTT 57.427 29.630 0.00 0.00 36.22 3.51
559 560 9.781633 TGTATAAGTTTGCTTTAAAGTACTCCA 57.218 29.630 16.38 2.99 36.22 3.86
562 563 6.819397 AGTTTGCTTTAAAGTACTCCATCC 57.181 37.500 16.38 0.00 30.19 3.51
563 564 5.411669 AGTTTGCTTTAAAGTACTCCATCCG 59.588 40.000 16.38 0.00 30.19 4.18
564 565 4.546829 TGCTTTAAAGTACTCCATCCGT 57.453 40.909 16.38 0.00 0.00 4.69
565 566 4.501071 TGCTTTAAAGTACTCCATCCGTC 58.499 43.478 16.38 0.00 0.00 4.79
566 567 3.869832 GCTTTAAAGTACTCCATCCGTCC 59.130 47.826 16.38 0.00 0.00 4.79
567 568 3.788333 TTAAAGTACTCCATCCGTCCG 57.212 47.619 0.00 0.00 0.00 4.79
568 569 0.822164 AAAGTACTCCATCCGTCCGG 59.178 55.000 0.00 0.00 0.00 5.14
579 580 2.660189 TCCGTCCGGAAATACTTGTC 57.340 50.000 5.23 0.00 42.05 3.18
580 581 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
581 582 2.498481 TCCGTCCGGAAATACTTGTCAT 59.502 45.455 5.23 0.00 42.05 3.06
582 583 2.864343 CCGTCCGGAAATACTTGTCATC 59.136 50.000 5.23 0.00 37.50 2.92
583 584 3.517602 CGTCCGGAAATACTTGTCATCA 58.482 45.455 5.23 0.00 0.00 3.07
584 585 3.930229 CGTCCGGAAATACTTGTCATCAA 59.070 43.478 5.23 0.00 0.00 2.57
585 586 4.390603 CGTCCGGAAATACTTGTCATCAAA 59.609 41.667 5.23 0.00 32.87 2.69
586 587 5.106869 CGTCCGGAAATACTTGTCATCAAAA 60.107 40.000 5.23 0.00 32.87 2.44
587 588 6.403200 CGTCCGGAAATACTTGTCATCAAAAT 60.403 38.462 5.23 0.00 32.87 1.82
588 589 6.747280 GTCCGGAAATACTTGTCATCAAAATG 59.253 38.462 5.23 0.00 32.87 2.32
589 590 6.657117 TCCGGAAATACTTGTCATCAAAATGA 59.343 34.615 0.00 0.00 39.63 2.57
590 591 7.175816 TCCGGAAATACTTGTCATCAAAATGAA 59.824 33.333 0.00 0.00 43.42 2.57
591 592 7.975616 CCGGAAATACTTGTCATCAAAATGAAT 59.024 33.333 0.00 0.00 43.42 2.57
598 599 8.059798 ACTTGTCATCAAAATGAATAGAAGGG 57.940 34.615 0.00 0.00 43.42 3.95
599 600 7.123247 ACTTGTCATCAAAATGAATAGAAGGGG 59.877 37.037 0.00 0.00 43.42 4.79
600 601 6.730447 TGTCATCAAAATGAATAGAAGGGGA 58.270 36.000 0.00 0.00 43.42 4.81
601 602 7.356680 TGTCATCAAAATGAATAGAAGGGGAT 58.643 34.615 0.00 0.00 43.42 3.85
602 603 7.286087 TGTCATCAAAATGAATAGAAGGGGATG 59.714 37.037 0.00 0.00 43.42 3.51
603 604 7.286316 GTCATCAAAATGAATAGAAGGGGATGT 59.714 37.037 0.00 0.00 43.42 3.06
604 605 8.501904 TCATCAAAATGAATAGAAGGGGATGTA 58.498 33.333 0.00 0.00 38.97 2.29
605 606 9.305555 CATCAAAATGAATAGAAGGGGATGTAT 57.694 33.333 0.00 0.00 34.61 2.29
606 607 8.924511 TCAAAATGAATAGAAGGGGATGTATC 57.075 34.615 0.00 0.00 0.00 2.24
607 608 8.727149 TCAAAATGAATAGAAGGGGATGTATCT 58.273 33.333 0.00 0.00 0.00 1.98
610 611 9.621239 AAATGAATAGAAGGGGATGTATCTAGA 57.379 33.333 0.00 0.00 0.00 2.43
611 612 9.796242 AATGAATAGAAGGGGATGTATCTAGAT 57.204 33.333 10.73 10.73 0.00 1.98
612 613 8.601047 TGAATAGAAGGGGATGTATCTAGATG 57.399 38.462 15.79 0.00 0.00 2.90
613 614 8.180165 TGAATAGAAGGGGATGTATCTAGATGT 58.820 37.037 15.79 1.25 0.00 3.06
614 615 9.702253 GAATAGAAGGGGATGTATCTAGATGTA 57.298 37.037 15.79 4.44 0.00 2.29
665 666 9.834628 TTATCCATTTTGACGACAAGTATTTTC 57.165 29.630 0.00 0.00 37.32 2.29
666 667 6.367421 TCCATTTTGACGACAAGTATTTTCG 58.633 36.000 0.00 0.00 37.32 3.46
667 668 5.567534 CCATTTTGACGACAAGTATTTTCGG 59.432 40.000 0.00 0.00 37.32 4.30
668 669 5.987777 TTTTGACGACAAGTATTTTCGGA 57.012 34.783 0.00 0.00 37.32 4.55
669 670 4.977741 TTGACGACAAGTATTTTCGGAC 57.022 40.909 0.00 0.00 37.07 4.79
670 671 4.247267 TGACGACAAGTATTTTCGGACT 57.753 40.909 0.00 0.00 37.07 3.85
671 672 3.985279 TGACGACAAGTATTTTCGGACTG 59.015 43.478 0.00 0.00 37.07 3.51
672 673 4.232221 GACGACAAGTATTTTCGGACTGA 58.768 43.478 0.00 0.00 37.07 3.41
673 674 4.235360 ACGACAAGTATTTTCGGACTGAG 58.765 43.478 0.00 0.00 37.07 3.35
674 675 3.612860 CGACAAGTATTTTCGGACTGAGG 59.387 47.826 0.00 0.00 0.00 3.86
675 676 3.933332 GACAAGTATTTTCGGACTGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
676 677 3.581332 ACAAGTATTTTCGGACTGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
677 678 4.184629 CAAGTATTTTCGGACTGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
678 679 3.442076 AGTATTTTCGGACTGAGGGAGT 58.558 45.455 0.00 0.00 37.76 3.85
679 680 4.607239 AGTATTTTCGGACTGAGGGAGTA 58.393 43.478 0.00 0.00 33.83 2.59
680 681 5.021458 AGTATTTTCGGACTGAGGGAGTAA 58.979 41.667 0.00 0.00 33.83 2.24
681 682 3.955650 TTTTCGGACTGAGGGAGTAAG 57.044 47.619 0.00 0.00 33.83 2.34
682 683 2.893215 TTCGGACTGAGGGAGTAAGA 57.107 50.000 0.00 0.00 33.83 2.10
683 684 2.421751 TCGGACTGAGGGAGTAAGAG 57.578 55.000 0.00 0.00 33.83 2.85
684 685 1.914108 TCGGACTGAGGGAGTAAGAGA 59.086 52.381 0.00 0.00 33.83 3.10
685 686 2.092861 TCGGACTGAGGGAGTAAGAGAG 60.093 54.545 0.00 0.00 33.83 3.20
686 687 2.092861 CGGACTGAGGGAGTAAGAGAGA 60.093 54.545 0.00 0.00 33.83 3.10
687 688 3.551846 GGACTGAGGGAGTAAGAGAGAG 58.448 54.545 0.00 0.00 33.83 3.20
688 689 3.201266 GGACTGAGGGAGTAAGAGAGAGA 59.799 52.174 0.00 0.00 33.83 3.10
689 690 4.451900 GACTGAGGGAGTAAGAGAGAGAG 58.548 52.174 0.00 0.00 33.83 3.20
690 691 4.108570 ACTGAGGGAGTAAGAGAGAGAGA 58.891 47.826 0.00 0.00 30.86 3.10
691 692 4.164221 ACTGAGGGAGTAAGAGAGAGAGAG 59.836 50.000 0.00 0.00 30.86 3.20
692 693 3.458118 TGAGGGAGTAAGAGAGAGAGAGG 59.542 52.174 0.00 0.00 0.00 3.69
693 694 2.783510 AGGGAGTAAGAGAGAGAGAGGG 59.216 54.545 0.00 0.00 0.00 4.30
694 695 2.512476 GGGAGTAAGAGAGAGAGAGGGT 59.488 54.545 0.00 0.00 0.00 4.34
695 696 3.551846 GGAGTAAGAGAGAGAGAGGGTG 58.448 54.545 0.00 0.00 0.00 4.61
696 697 3.053917 GGAGTAAGAGAGAGAGAGGGTGT 60.054 52.174 0.00 0.00 0.00 4.16
697 698 3.945285 GAGTAAGAGAGAGAGAGGGTGTG 59.055 52.174 0.00 0.00 0.00 3.82
698 699 2.990740 AAGAGAGAGAGAGGGTGTGT 57.009 50.000 0.00 0.00 0.00 3.72
699 700 2.214376 AGAGAGAGAGAGGGTGTGTG 57.786 55.000 0.00 0.00 0.00 3.82
700 701 1.427368 AGAGAGAGAGAGGGTGTGTGT 59.573 52.381 0.00 0.00 0.00 3.72
701 702 1.543802 GAGAGAGAGAGGGTGTGTGTG 59.456 57.143 0.00 0.00 0.00 3.82
702 703 1.133325 AGAGAGAGAGGGTGTGTGTGT 60.133 52.381 0.00 0.00 0.00 3.72
703 704 1.000283 GAGAGAGAGGGTGTGTGTGTG 60.000 57.143 0.00 0.00 0.00 3.82
704 705 0.753262 GAGAGAGGGTGTGTGTGTGT 59.247 55.000 0.00 0.00 0.00 3.72
705 706 1.139058 GAGAGAGGGTGTGTGTGTGTT 59.861 52.381 0.00 0.00 0.00 3.32
706 707 1.559682 AGAGAGGGTGTGTGTGTGTTT 59.440 47.619 0.00 0.00 0.00 2.83
707 708 2.026262 AGAGAGGGTGTGTGTGTGTTTT 60.026 45.455 0.00 0.00 0.00 2.43
708 709 2.752903 GAGAGGGTGTGTGTGTGTTTTT 59.247 45.455 0.00 0.00 0.00 1.94
709 710 3.942748 GAGAGGGTGTGTGTGTGTTTTTA 59.057 43.478 0.00 0.00 0.00 1.52
710 711 4.337145 AGAGGGTGTGTGTGTGTTTTTAA 58.663 39.130 0.00 0.00 0.00 1.52
711 712 4.953579 AGAGGGTGTGTGTGTGTTTTTAAT 59.046 37.500 0.00 0.00 0.00 1.40
712 713 5.420739 AGAGGGTGTGTGTGTGTTTTTAATT 59.579 36.000 0.00 0.00 0.00 1.40
713 714 5.415221 AGGGTGTGTGTGTGTTTTTAATTG 58.585 37.500 0.00 0.00 0.00 2.32
714 715 5.046950 AGGGTGTGTGTGTGTTTTTAATTGT 60.047 36.000 0.00 0.00 0.00 2.71
715 716 5.062809 GGGTGTGTGTGTGTTTTTAATTGTG 59.937 40.000 0.00 0.00 0.00 3.33
716 717 5.864474 GGTGTGTGTGTGTTTTTAATTGTGA 59.136 36.000 0.00 0.00 0.00 3.58
717 718 6.034470 GGTGTGTGTGTGTTTTTAATTGTGAG 59.966 38.462 0.00 0.00 0.00 3.51
718 719 5.574830 TGTGTGTGTGTTTTTAATTGTGAGC 59.425 36.000 0.00 0.00 0.00 4.26
719 720 5.804979 GTGTGTGTGTTTTTAATTGTGAGCT 59.195 36.000 0.00 0.00 0.00 4.09
720 721 5.804473 TGTGTGTGTTTTTAATTGTGAGCTG 59.196 36.000 0.00 0.00 0.00 4.24
721 722 5.231991 GTGTGTGTTTTTAATTGTGAGCTGG 59.768 40.000 0.00 0.00 0.00 4.85
722 723 4.744631 GTGTGTTTTTAATTGTGAGCTGGG 59.255 41.667 0.00 0.00 0.00 4.45
723 724 4.202202 TGTGTTTTTAATTGTGAGCTGGGG 60.202 41.667 0.00 0.00 0.00 4.96
724 725 3.244044 TGTTTTTAATTGTGAGCTGGGGC 60.244 43.478 0.00 0.00 39.06 5.80
725 726 1.173043 TTTAATTGTGAGCTGGGGCG 58.827 50.000 0.00 0.00 44.37 6.13
726 727 1.312371 TTAATTGTGAGCTGGGGCGC 61.312 55.000 0.00 0.00 44.37 6.53
727 728 2.196997 TAATTGTGAGCTGGGGCGCT 62.197 55.000 7.64 0.00 44.33 5.92
738 739 4.632974 GGGCGCTGGGCAGGATAG 62.633 72.222 18.70 0.00 46.16 2.08
739 740 3.550431 GGCGCTGGGCAGGATAGA 61.550 66.667 18.70 0.00 46.16 1.98
740 741 2.505982 GCGCTGGGCAGGATAGAA 59.494 61.111 12.19 0.00 42.87 2.10
741 742 1.072159 GCGCTGGGCAGGATAGAAT 59.928 57.895 12.19 0.00 42.87 2.40
742 743 0.952984 GCGCTGGGCAGGATAGAATC 60.953 60.000 12.19 0.00 42.87 2.52
743 744 0.668706 CGCTGGGCAGGATAGAATCG 60.669 60.000 0.00 0.00 0.00 3.34
744 745 0.321122 GCTGGGCAGGATAGAATCGG 60.321 60.000 0.00 0.00 0.00 4.18
745 746 0.322975 CTGGGCAGGATAGAATCGGG 59.677 60.000 0.00 0.00 0.00 5.14
746 747 1.003233 GGGCAGGATAGAATCGGGC 60.003 63.158 0.00 0.00 0.00 6.13
747 748 1.754745 GGCAGGATAGAATCGGGCA 59.245 57.895 0.00 0.00 32.67 5.36
748 749 0.108585 GGCAGGATAGAATCGGGCAA 59.891 55.000 0.00 0.00 32.67 4.52
749 750 1.230324 GCAGGATAGAATCGGGCAAC 58.770 55.000 0.00 0.00 0.00 4.17
819 824 1.200519 TGGAACCCGAATCCACTAGG 58.799 55.000 0.00 0.00 41.98 3.02
820 825 0.179054 GGAACCCGAATCCACTAGGC 60.179 60.000 0.00 0.00 36.92 3.93
900 916 0.395586 TCCTCGCCAATCCCCATTTG 60.396 55.000 0.00 0.00 0.00 2.32
901 917 1.394266 CCTCGCCAATCCCCATTTGG 61.394 60.000 0.00 0.00 45.30 3.28
1142 1169 3.925914 AAGCGCTCCCCTACCTGGT 62.926 63.158 12.06 4.05 0.00 4.00
1195 1222 4.109675 CTACCAAGGTGGCGGGGG 62.110 72.222 1.07 0.00 42.67 5.40
1251 1278 3.699894 CTCCAGGCGCTCACAGGT 61.700 66.667 7.64 0.00 0.00 4.00
1253 1280 4.320456 CCAGGCGCTCACAGGTGT 62.320 66.667 7.64 0.00 0.00 4.16
1331 1367 0.737715 CAGTTCCTGCTCTACGTGGC 60.738 60.000 0.00 0.10 0.00 5.01
1393 4911 3.766151 TCGTCGAAATAAGCACCTGTAG 58.234 45.455 0.00 0.00 0.00 2.74
1411 4929 5.447818 CCTGTAGCATTTCCTTCGATTGAAC 60.448 44.000 0.00 0.00 0.00 3.18
1414 4932 4.326826 AGCATTTCCTTCGATTGAACTGA 58.673 39.130 14.80 0.00 0.00 3.41
1419 4937 2.237143 TCCTTCGATTGAACTGAGGCAT 59.763 45.455 0.00 0.00 0.00 4.40
1438 4957 4.260170 GCATTAGATAGGCAGCAAGCTAT 58.740 43.478 0.00 0.00 44.79 2.97
1454 4995 9.311916 CAGCAAGCTATCCTAGATTAATACATC 57.688 37.037 0.00 0.00 31.74 3.06
1474 5015 7.649533 ACATCAACAATATTCACATGTCCAT 57.350 32.000 0.00 0.00 0.00 3.41
1550 5111 1.362768 TGTGAGTTCATCTGCATCGC 58.637 50.000 0.00 0.00 0.00 4.58
1624 5189 1.261480 GTTGTCCTCCTCAGAGAGCA 58.739 55.000 0.00 0.00 43.39 4.26
1949 5544 9.533253 AAGCCATATTATTTTCAGTTAATGTGC 57.467 29.630 0.00 0.00 30.16 4.57
2271 5902 4.279659 GTTCAAGTCGTCAATTGACCAAC 58.720 43.478 28.40 25.00 41.86 3.77
2278 5909 3.073678 CGTCAATTGACCAACCAGATGA 58.926 45.455 28.40 0.00 41.86 2.92
2319 5950 6.146510 CAGTGAAAACCTAGTATGCGTTGTTA 59.853 38.462 0.00 0.00 0.00 2.41
2551 6357 9.715121 AATTCAACTATTCAAGTCGGTAAACTA 57.285 29.630 0.00 0.00 37.50 2.24
2552 6358 9.886132 ATTCAACTATTCAAGTCGGTAAACTAT 57.114 29.630 0.00 0.00 37.50 2.12
2553 6359 8.697846 TCAACTATTCAAGTCGGTAAACTATG 57.302 34.615 0.00 0.00 37.50 2.23
2554 6360 7.277098 TCAACTATTCAAGTCGGTAAACTATGC 59.723 37.037 0.00 0.00 37.50 3.14
2555 6361 6.875076 ACTATTCAAGTCGGTAAACTATGCT 58.125 36.000 0.00 0.00 30.33 3.79
2556 6362 7.328737 ACTATTCAAGTCGGTAAACTATGCTT 58.671 34.615 0.00 0.00 30.33 3.91
2891 8807 5.068198 ACATGATGCCATTAGTTCCATTGAC 59.932 40.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 5.884232 ACCCTATTAAAATGGACTCGGAAAC 59.116 40.000 0.00 0.00 0.00 2.78
6 7 5.883673 CACCCTATTAAAATGGACTCGGAAA 59.116 40.000 0.00 0.00 0.00 3.13
7 8 5.433526 CACCCTATTAAAATGGACTCGGAA 58.566 41.667 0.00 0.00 0.00 4.30
8 9 4.685030 GCACCCTATTAAAATGGACTCGGA 60.685 45.833 0.00 0.00 0.00 4.55
9 10 3.564225 GCACCCTATTAAAATGGACTCGG 59.436 47.826 0.00 0.00 0.00 4.63
10 11 4.273480 CAGCACCCTATTAAAATGGACTCG 59.727 45.833 0.00 0.00 0.00 4.18
11 12 5.193679 ACAGCACCCTATTAAAATGGACTC 58.806 41.667 0.00 0.00 0.00 3.36
12 13 5.193099 ACAGCACCCTATTAAAATGGACT 57.807 39.130 0.00 0.00 0.00 3.85
13 14 6.826741 TCTTACAGCACCCTATTAAAATGGAC 59.173 38.462 0.00 0.00 0.00 4.02
14 15 6.964464 TCTTACAGCACCCTATTAAAATGGA 58.036 36.000 0.00 0.00 0.00 3.41
15 16 7.823745 ATCTTACAGCACCCTATTAAAATGG 57.176 36.000 0.00 0.00 0.00 3.16
22 23 8.903820 GTTGAAATTATCTTACAGCACCCTATT 58.096 33.333 0.00 0.00 0.00 1.73
23 24 8.052748 TGTTGAAATTATCTTACAGCACCCTAT 58.947 33.333 0.00 0.00 0.00 2.57
24 25 7.398829 TGTTGAAATTATCTTACAGCACCCTA 58.601 34.615 0.00 0.00 0.00 3.53
25 26 6.245408 TGTTGAAATTATCTTACAGCACCCT 58.755 36.000 0.00 0.00 0.00 4.34
26 27 6.509418 TGTTGAAATTATCTTACAGCACCC 57.491 37.500 0.00 0.00 0.00 4.61
27 28 7.148086 TGGATGTTGAAATTATCTTACAGCACC 60.148 37.037 0.00 0.00 33.94 5.01
28 29 7.761409 TGGATGTTGAAATTATCTTACAGCAC 58.239 34.615 0.00 0.00 33.94 4.40
29 30 7.936496 TGGATGTTGAAATTATCTTACAGCA 57.064 32.000 0.00 0.00 33.94 4.41
30 31 9.076596 GTTTGGATGTTGAAATTATCTTACAGC 57.923 33.333 0.00 0.00 32.55 4.40
32 33 9.906660 GTGTTTGGATGTTGAAATTATCTTACA 57.093 29.630 0.00 0.00 0.00 2.41
33 34 9.906660 TGTGTTTGGATGTTGAAATTATCTTAC 57.093 29.630 0.00 0.00 0.00 2.34
36 37 9.426837 CATTGTGTTTGGATGTTGAAATTATCT 57.573 29.630 0.00 0.00 0.00 1.98
37 38 8.170553 GCATTGTGTTTGGATGTTGAAATTATC 58.829 33.333 0.00 0.00 0.00 1.75
38 39 7.148606 CGCATTGTGTTTGGATGTTGAAATTAT 60.149 33.333 0.00 0.00 0.00 1.28
39 40 6.145209 CGCATTGTGTTTGGATGTTGAAATTA 59.855 34.615 0.00 0.00 0.00 1.40
40 41 5.050227 CGCATTGTGTTTGGATGTTGAAATT 60.050 36.000 0.00 0.00 0.00 1.82
41 42 4.448395 CGCATTGTGTTTGGATGTTGAAAT 59.552 37.500 0.00 0.00 0.00 2.17
42 43 3.801050 CGCATTGTGTTTGGATGTTGAAA 59.199 39.130 0.00 0.00 0.00 2.69
43 44 3.067320 TCGCATTGTGTTTGGATGTTGAA 59.933 39.130 0.00 0.00 0.00 2.69
44 45 2.620585 TCGCATTGTGTTTGGATGTTGA 59.379 40.909 0.00 0.00 0.00 3.18
45 46 3.010624 TCGCATTGTGTTTGGATGTTG 57.989 42.857 0.00 0.00 0.00 3.33
46 47 3.367292 GGATCGCATTGTGTTTGGATGTT 60.367 43.478 0.00 0.00 0.00 2.71
47 48 2.164219 GGATCGCATTGTGTTTGGATGT 59.836 45.455 0.00 0.00 0.00 3.06
48 49 2.164017 TGGATCGCATTGTGTTTGGATG 59.836 45.455 0.00 0.00 0.00 3.51
49 50 2.445427 TGGATCGCATTGTGTTTGGAT 58.555 42.857 0.00 0.00 0.00 3.41
50 51 1.902938 TGGATCGCATTGTGTTTGGA 58.097 45.000 0.00 0.00 0.00 3.53
51 52 2.721274 TTGGATCGCATTGTGTTTGG 57.279 45.000 0.00 0.00 0.00 3.28
52 53 2.730928 GGTTTGGATCGCATTGTGTTTG 59.269 45.455 0.00 0.00 0.00 2.93
53 54 2.288763 GGGTTTGGATCGCATTGTGTTT 60.289 45.455 0.00 0.00 0.00 2.83
54 55 1.272212 GGGTTTGGATCGCATTGTGTT 59.728 47.619 0.00 0.00 0.00 3.32
55 56 0.887933 GGGTTTGGATCGCATTGTGT 59.112 50.000 0.00 0.00 0.00 3.72
56 57 0.179166 CGGGTTTGGATCGCATTGTG 60.179 55.000 0.00 0.00 0.00 3.33
57 58 0.322098 TCGGGTTTGGATCGCATTGT 60.322 50.000 0.00 0.00 0.00 2.71
58 59 0.098728 GTCGGGTTTGGATCGCATTG 59.901 55.000 0.00 0.00 0.00 2.82
59 60 0.035439 AGTCGGGTTTGGATCGCATT 60.035 50.000 0.00 0.00 0.00 3.56
60 61 0.462047 GAGTCGGGTTTGGATCGCAT 60.462 55.000 0.00 0.00 0.00 4.73
61 62 1.079405 GAGTCGGGTTTGGATCGCA 60.079 57.895 0.00 0.00 0.00 5.10
62 63 1.814169 GGAGTCGGGTTTGGATCGC 60.814 63.158 0.00 0.00 0.00 4.58
63 64 1.518572 CGGAGTCGGGTTTGGATCG 60.519 63.158 0.00 0.00 0.00 3.69
64 65 0.459759 GTCGGAGTCGGGTTTGGATC 60.460 60.000 0.00 0.00 36.95 3.36
65 66 0.903454 AGTCGGAGTCGGGTTTGGAT 60.903 55.000 0.00 0.00 36.95 3.41
66 67 1.532316 AGTCGGAGTCGGGTTTGGA 60.532 57.895 0.00 0.00 36.95 3.53
67 68 1.374252 CAGTCGGAGTCGGGTTTGG 60.374 63.158 0.00 0.00 36.95 3.28
68 69 0.032952 TTCAGTCGGAGTCGGGTTTG 59.967 55.000 0.00 0.00 36.95 2.93
69 70 0.754472 TTTCAGTCGGAGTCGGGTTT 59.246 50.000 0.00 0.00 36.95 3.27
70 71 0.317479 CTTTCAGTCGGAGTCGGGTT 59.683 55.000 0.00 0.00 36.95 4.11
71 72 1.533469 CCTTTCAGTCGGAGTCGGGT 61.533 60.000 0.00 0.00 36.95 5.28
72 73 1.215647 CCTTTCAGTCGGAGTCGGG 59.784 63.158 0.00 0.00 36.95 5.14
73 74 0.818296 ATCCTTTCAGTCGGAGTCGG 59.182 55.000 0.00 0.00 36.95 4.79
74 75 2.539142 CGTATCCTTTCAGTCGGAGTCG 60.539 54.545 0.00 0.00 31.82 4.18
75 76 2.223525 CCGTATCCTTTCAGTCGGAGTC 60.224 54.545 0.00 0.00 40.29 3.36
76 77 1.749634 CCGTATCCTTTCAGTCGGAGT 59.250 52.381 0.00 0.00 40.29 3.85
77 78 1.749634 ACCGTATCCTTTCAGTCGGAG 59.250 52.381 8.35 0.00 40.90 4.63
78 79 1.843368 ACCGTATCCTTTCAGTCGGA 58.157 50.000 8.35 0.00 40.90 4.55
79 80 5.240183 TCTTATACCGTATCCTTTCAGTCGG 59.760 44.000 0.00 0.00 42.94 4.79
80 81 6.309712 TCTTATACCGTATCCTTTCAGTCG 57.690 41.667 0.00 0.00 0.00 4.18
81 82 9.790389 CATATCTTATACCGTATCCTTTCAGTC 57.210 37.037 0.00 0.00 0.00 3.51
82 83 9.529823 TCATATCTTATACCGTATCCTTTCAGT 57.470 33.333 0.00 0.00 0.00 3.41
110 111 8.937207 ATCCTACGGTGTCTTCTATTAGTAAT 57.063 34.615 0.17 0.17 0.00 1.89
111 112 9.851686 TTATCCTACGGTGTCTTCTATTAGTAA 57.148 33.333 0.00 0.00 0.00 2.24
112 113 9.499479 CTTATCCTACGGTGTCTTCTATTAGTA 57.501 37.037 0.00 0.00 0.00 1.82
113 114 7.997803 ACTTATCCTACGGTGTCTTCTATTAGT 59.002 37.037 0.00 0.00 0.00 2.24
114 115 8.393671 ACTTATCCTACGGTGTCTTCTATTAG 57.606 38.462 0.00 0.00 0.00 1.73
115 116 7.172190 CGACTTATCCTACGGTGTCTTCTATTA 59.828 40.741 0.00 0.00 0.00 0.98
116 117 6.017275 CGACTTATCCTACGGTGTCTTCTATT 60.017 42.308 0.00 0.00 0.00 1.73
117 118 5.469421 CGACTTATCCTACGGTGTCTTCTAT 59.531 44.000 0.00 0.00 0.00 1.98
118 119 4.813161 CGACTTATCCTACGGTGTCTTCTA 59.187 45.833 0.00 0.00 0.00 2.10
119 120 3.626670 CGACTTATCCTACGGTGTCTTCT 59.373 47.826 0.00 0.00 0.00 2.85
120 121 3.376546 ACGACTTATCCTACGGTGTCTTC 59.623 47.826 0.00 0.00 0.00 2.87
121 122 3.350833 ACGACTTATCCTACGGTGTCTT 58.649 45.455 0.00 0.00 0.00 3.01
122 123 2.996631 ACGACTTATCCTACGGTGTCT 58.003 47.619 0.00 0.00 0.00 3.41
123 124 3.772060 AACGACTTATCCTACGGTGTC 57.228 47.619 0.00 0.00 0.00 3.67
124 125 5.841957 ATAAACGACTTATCCTACGGTGT 57.158 39.130 0.00 0.00 0.00 4.16
125 126 5.397534 CGAATAAACGACTTATCCTACGGTG 59.602 44.000 0.00 0.00 35.09 4.94
126 127 5.296780 TCGAATAAACGACTTATCCTACGGT 59.703 40.000 0.00 0.00 37.37 4.83
127 128 5.751680 TCGAATAAACGACTTATCCTACGG 58.248 41.667 0.00 0.00 37.37 4.02
128 129 5.339085 GCTCGAATAAACGACTTATCCTACG 59.661 44.000 0.00 0.00 37.37 3.51
129 130 5.628606 GGCTCGAATAAACGACTTATCCTAC 59.371 44.000 0.00 0.00 37.37 3.18
130 131 5.300034 TGGCTCGAATAAACGACTTATCCTA 59.700 40.000 0.00 0.00 37.37 2.94
131 132 4.098960 TGGCTCGAATAAACGACTTATCCT 59.901 41.667 0.00 0.00 37.37 3.24
132 133 4.365723 TGGCTCGAATAAACGACTTATCC 58.634 43.478 0.00 0.00 37.37 2.59
133 134 5.279384 TCTGGCTCGAATAAACGACTTATC 58.721 41.667 0.00 0.00 37.37 1.75
134 135 5.258456 TCTGGCTCGAATAAACGACTTAT 57.742 39.130 0.00 0.00 37.37 1.73
135 136 4.707030 TCTGGCTCGAATAAACGACTTA 57.293 40.909 0.00 0.00 37.37 2.24
136 137 3.587797 TCTGGCTCGAATAAACGACTT 57.412 42.857 0.00 0.00 37.37 3.01
137 138 3.802948 ATCTGGCTCGAATAAACGACT 57.197 42.857 0.00 0.00 37.37 4.18
138 139 5.118817 GGATTATCTGGCTCGAATAAACGAC 59.881 44.000 0.00 0.00 37.37 4.34
139 140 5.227908 GGATTATCTGGCTCGAATAAACGA 58.772 41.667 0.00 0.00 40.00 3.85
140 141 4.090066 CGGATTATCTGGCTCGAATAAACG 59.910 45.833 0.00 0.00 0.00 3.60
141 142 5.227908 TCGGATTATCTGGCTCGAATAAAC 58.772 41.667 0.76 0.00 0.00 2.01
142 143 5.462530 TCGGATTATCTGGCTCGAATAAA 57.537 39.130 0.76 0.00 0.00 1.40
143 144 5.394224 GGATCGGATTATCTGGCTCGAATAA 60.394 44.000 0.76 0.00 0.00 1.40
144 145 4.098044 GGATCGGATTATCTGGCTCGAATA 59.902 45.833 0.76 0.00 0.00 1.75
145 146 3.118956 GGATCGGATTATCTGGCTCGAAT 60.119 47.826 0.76 0.00 0.00 3.34
146 147 2.231478 GGATCGGATTATCTGGCTCGAA 59.769 50.000 0.76 0.00 0.00 3.71
147 148 1.819288 GGATCGGATTATCTGGCTCGA 59.181 52.381 0.76 0.00 0.00 4.04
148 149 1.821753 AGGATCGGATTATCTGGCTCG 59.178 52.381 0.76 0.00 0.00 5.03
149 150 3.971245 AAGGATCGGATTATCTGGCTC 57.029 47.619 0.76 0.00 0.00 4.70
150 151 5.825593 TTAAAGGATCGGATTATCTGGCT 57.174 39.130 0.76 0.00 0.00 4.75
151 152 6.877611 TTTTAAAGGATCGGATTATCTGGC 57.122 37.500 0.76 0.00 0.00 4.85
172 173 9.916360 ATATTTAGAAACGGAGGGAGTATTTTT 57.084 29.630 0.00 0.00 0.00 1.94
176 177 9.377238 ACTTATATTTAGAAACGGAGGGAGTAT 57.623 33.333 0.00 0.00 0.00 2.12
177 178 8.773033 ACTTATATTTAGAAACGGAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
178 179 7.564292 AGACTTATATTTAGAAACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
179 180 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
180 181 7.909485 AGACTTATATTTAGAAACGGAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
181 182 8.959705 AAAGACTTATATTTAGAAACGGAGGG 57.040 34.615 0.00 0.00 0.00 4.30
182 183 9.819267 AGAAAGACTTATATTTAGAAACGGAGG 57.181 33.333 0.00 0.00 0.00 4.30
197 198 9.883142 CTTGTTGGAATCTCTAGAAAGACTTAT 57.117 33.333 0.00 0.00 0.00 1.73
198 199 8.871125 ACTTGTTGGAATCTCTAGAAAGACTTA 58.129 33.333 0.00 0.00 0.00 2.24
199 200 7.659390 CACTTGTTGGAATCTCTAGAAAGACTT 59.341 37.037 0.00 0.00 0.00 3.01
200 201 7.158021 CACTTGTTGGAATCTCTAGAAAGACT 58.842 38.462 0.00 0.00 0.00 3.24
201 202 7.357951 CACTTGTTGGAATCTCTAGAAAGAC 57.642 40.000 0.00 0.00 0.00 3.01
217 218 3.372206 GCTCTGTATGTAGCCACTTGTTG 59.628 47.826 0.00 0.00 32.40 3.33
218 219 3.007940 TGCTCTGTATGTAGCCACTTGTT 59.992 43.478 0.00 0.00 37.97 2.83
219 220 2.567169 TGCTCTGTATGTAGCCACTTGT 59.433 45.455 0.00 0.00 37.97 3.16
220 221 3.251479 TGCTCTGTATGTAGCCACTTG 57.749 47.619 0.00 0.00 37.97 3.16
221 222 3.981071 TTGCTCTGTATGTAGCCACTT 57.019 42.857 0.00 0.00 37.97 3.16
222 223 3.981071 TTTGCTCTGTATGTAGCCACT 57.019 42.857 0.00 0.00 37.97 4.00
223 224 4.635765 TCATTTTGCTCTGTATGTAGCCAC 59.364 41.667 0.00 0.00 37.97 5.01
224 225 4.842574 TCATTTTGCTCTGTATGTAGCCA 58.157 39.130 0.00 0.00 37.97 4.75
225 226 5.573146 GTTCATTTTGCTCTGTATGTAGCC 58.427 41.667 0.00 0.00 37.97 3.93
226 227 5.063438 TCGTTCATTTTGCTCTGTATGTAGC 59.937 40.000 0.00 0.00 39.25 3.58
227 228 6.647212 TCGTTCATTTTGCTCTGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
228 229 7.549134 AGATTCGTTCATTTTGCTCTGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
229 230 5.940192 TTCGTTCATTTTGCTCTGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
230 231 6.779117 AGATTCGTTCATTTTGCTCTGTATG 58.221 36.000 0.00 0.00 0.00 2.39
231 232 6.992063 AGATTCGTTCATTTTGCTCTGTAT 57.008 33.333 0.00 0.00 0.00 2.29
232 233 6.871492 TGTAGATTCGTTCATTTTGCTCTGTA 59.129 34.615 0.00 0.00 0.00 2.74
233 234 5.700832 TGTAGATTCGTTCATTTTGCTCTGT 59.299 36.000 0.00 0.00 0.00 3.41
234 235 6.017933 GTGTAGATTCGTTCATTTTGCTCTG 58.982 40.000 0.00 0.00 0.00 3.35
235 236 5.934625 AGTGTAGATTCGTTCATTTTGCTCT 59.065 36.000 0.00 0.00 0.00 4.09
236 237 6.091441 AGAGTGTAGATTCGTTCATTTTGCTC 59.909 38.462 0.00 0.00 0.00 4.26
237 238 5.934625 AGAGTGTAGATTCGTTCATTTTGCT 59.065 36.000 0.00 0.00 0.00 3.91
238 239 6.170675 AGAGTGTAGATTCGTTCATTTTGC 57.829 37.500 0.00 0.00 0.00 3.68
281 282 9.748708 CCATTTTAAATGGACTACAACATATGG 57.251 33.333 27.45 0.10 41.64 2.74
282 283 9.248291 GCCATTTTAAATGGACTACAACATATG 57.752 33.333 33.34 0.00 41.64 1.78
283 284 9.200817 AGCCATTTTAAATGGACTACAACATAT 57.799 29.630 33.34 8.66 41.64 1.78
284 285 8.588290 AGCCATTTTAAATGGACTACAACATA 57.412 30.769 33.34 0.00 41.64 2.29
285 286 7.480760 AGCCATTTTAAATGGACTACAACAT 57.519 32.000 33.34 9.79 41.64 2.71
286 287 6.909550 AGCCATTTTAAATGGACTACAACA 57.090 33.333 33.34 0.00 41.64 3.33
287 288 9.699703 TTTTAGCCATTTTAAATGGACTACAAC 57.300 29.630 33.34 17.28 41.64 3.32
289 290 9.921637 CTTTTTAGCCATTTTAAATGGACTACA 57.078 29.630 33.34 23.23 41.64 2.74
292 293 8.870116 AGTCTTTTTAGCCATTTTAAATGGACT 58.130 29.630 33.34 28.58 41.64 3.85
293 294 9.489084 AAGTCTTTTTAGCCATTTTAAATGGAC 57.511 29.630 33.34 24.59 41.64 4.02
305 306 9.623000 GGTCCTAAATATAAGTCTTTTTAGCCA 57.377 33.333 8.75 0.00 32.72 4.75
306 307 8.771766 CGGTCCTAAATATAAGTCTTTTTAGCC 58.228 37.037 8.75 6.10 32.72 3.93
307 308 8.771766 CCGGTCCTAAATATAAGTCTTTTTAGC 58.228 37.037 8.75 0.24 32.72 3.09
310 311 7.991460 CCTCCGGTCCTAAATATAAGTCTTTTT 59.009 37.037 0.00 0.00 0.00 1.94
311 312 7.419865 CCCTCCGGTCCTAAATATAAGTCTTTT 60.420 40.741 0.00 0.00 0.00 2.27
312 313 6.042897 CCCTCCGGTCCTAAATATAAGTCTTT 59.957 42.308 0.00 0.00 0.00 2.52
313 314 5.543020 CCCTCCGGTCCTAAATATAAGTCTT 59.457 44.000 0.00 0.00 0.00 3.01
314 315 5.085219 CCCTCCGGTCCTAAATATAAGTCT 58.915 45.833 0.00 0.00 0.00 3.24
315 316 5.082425 TCCCTCCGGTCCTAAATATAAGTC 58.918 45.833 0.00 0.00 0.00 3.01
316 317 5.083953 TCCCTCCGGTCCTAAATATAAGT 57.916 43.478 0.00 0.00 0.00 2.24
317 318 5.085219 ACTCCCTCCGGTCCTAAATATAAG 58.915 45.833 0.00 0.00 0.00 1.73
318 319 5.083953 ACTCCCTCCGGTCCTAAATATAA 57.916 43.478 0.00 0.00 0.00 0.98
319 320 4.754411 ACTCCCTCCGGTCCTAAATATA 57.246 45.455 0.00 0.00 0.00 0.86
320 321 3.632420 ACTCCCTCCGGTCCTAAATAT 57.368 47.619 0.00 0.00 0.00 1.28
321 322 4.754411 ATACTCCCTCCGGTCCTAAATA 57.246 45.455 0.00 0.00 0.00 1.40
322 323 3.632420 ATACTCCCTCCGGTCCTAAAT 57.368 47.619 0.00 0.00 0.00 1.40
323 324 3.748668 CGTATACTCCCTCCGGTCCTAAA 60.749 52.174 0.00 0.00 0.00 1.85
324 325 2.224621 CGTATACTCCCTCCGGTCCTAA 60.225 54.545 0.00 0.00 0.00 2.69
325 326 1.349026 CGTATACTCCCTCCGGTCCTA 59.651 57.143 0.00 0.00 0.00 2.94
326 327 0.110104 CGTATACTCCCTCCGGTCCT 59.890 60.000 0.00 0.00 0.00 3.85
327 328 0.892814 CCGTATACTCCCTCCGGTCC 60.893 65.000 0.00 0.00 34.10 4.46
328 329 0.109342 TCCGTATACTCCCTCCGGTC 59.891 60.000 0.00 0.00 39.62 4.79
329 330 0.776176 ATCCGTATACTCCCTCCGGT 59.224 55.000 0.00 0.00 39.62 5.28
330 331 2.290514 TGTATCCGTATACTCCCTCCGG 60.291 54.545 0.00 0.00 39.05 5.14
331 332 2.746362 GTGTATCCGTATACTCCCTCCG 59.254 54.545 0.56 0.00 39.05 4.63
332 333 3.505293 GTGTGTATCCGTATACTCCCTCC 59.495 52.174 0.56 0.00 39.05 4.30
333 334 4.396522 AGTGTGTATCCGTATACTCCCTC 58.603 47.826 0.56 0.00 39.05 4.30
334 335 4.450305 AGTGTGTATCCGTATACTCCCT 57.550 45.455 0.56 0.00 39.05 4.20
335 336 5.526506 AAAGTGTGTATCCGTATACTCCC 57.473 43.478 0.56 0.00 39.05 4.30
336 337 8.975439 CAAATAAAGTGTGTATCCGTATACTCC 58.025 37.037 0.56 0.00 39.05 3.85
337 338 9.525409 ACAAATAAAGTGTGTATCCGTATACTC 57.475 33.333 0.56 0.00 39.05 2.59
380 381 9.630098 CAAAGATAACATTCACACTTTGCTAAT 57.370 29.630 0.00 0.00 38.09 1.73
385 386 7.113965 GTCAGCAAAGATAACATTCACACTTTG 59.886 37.037 0.00 0.00 43.56 2.77
386 387 7.141363 GTCAGCAAAGATAACATTCACACTTT 58.859 34.615 0.00 0.00 0.00 2.66
387 388 6.566564 CGTCAGCAAAGATAACATTCACACTT 60.567 38.462 0.00 0.00 0.00 3.16
388 389 5.106948 CGTCAGCAAAGATAACATTCACACT 60.107 40.000 0.00 0.00 0.00 3.55
389 390 5.082059 CGTCAGCAAAGATAACATTCACAC 58.918 41.667 0.00 0.00 0.00 3.82
390 391 4.994217 TCGTCAGCAAAGATAACATTCACA 59.006 37.500 0.00 0.00 0.00 3.58
391 392 5.348724 TCTCGTCAGCAAAGATAACATTCAC 59.651 40.000 0.00 0.00 0.00 3.18
392 393 5.348724 GTCTCGTCAGCAAAGATAACATTCA 59.651 40.000 0.00 0.00 0.00 2.57
393 394 5.499334 CGTCTCGTCAGCAAAGATAACATTC 60.499 44.000 0.00 0.00 0.00 2.67
394 395 4.327357 CGTCTCGTCAGCAAAGATAACATT 59.673 41.667 0.00 0.00 0.00 2.71
395 396 3.859961 CGTCTCGTCAGCAAAGATAACAT 59.140 43.478 0.00 0.00 0.00 2.71
396 397 3.057806 TCGTCTCGTCAGCAAAGATAACA 60.058 43.478 0.00 0.00 0.00 2.41
397 398 3.499048 TCGTCTCGTCAGCAAAGATAAC 58.501 45.455 0.00 0.00 0.00 1.89
398 399 3.842732 TCGTCTCGTCAGCAAAGATAA 57.157 42.857 0.00 0.00 0.00 1.75
399 400 3.842732 TTCGTCTCGTCAGCAAAGATA 57.157 42.857 0.00 0.00 0.00 1.98
400 401 2.724977 TTCGTCTCGTCAGCAAAGAT 57.275 45.000 0.00 0.00 0.00 2.40
401 402 2.124903 GTTTCGTCTCGTCAGCAAAGA 58.875 47.619 0.00 0.00 0.00 2.52
402 403 1.136884 CGTTTCGTCTCGTCAGCAAAG 60.137 52.381 0.00 0.00 0.00 2.77
403 404 0.850217 CGTTTCGTCTCGTCAGCAAA 59.150 50.000 0.00 0.00 0.00 3.68
404 405 0.248743 ACGTTTCGTCTCGTCAGCAA 60.249 50.000 0.00 0.00 33.69 3.91
405 406 0.587768 TACGTTTCGTCTCGTCAGCA 59.412 50.000 0.00 0.00 41.54 4.41
406 407 1.642843 CTTACGTTTCGTCTCGTCAGC 59.357 52.381 0.00 0.00 41.54 4.26
407 408 1.642843 GCTTACGTTTCGTCTCGTCAG 59.357 52.381 0.00 5.66 41.54 3.51
408 409 1.265095 AGCTTACGTTTCGTCTCGTCA 59.735 47.619 0.00 0.00 41.54 4.35
409 410 1.903775 GAGCTTACGTTTCGTCTCGTC 59.096 52.381 0.00 0.00 41.54 4.20
410 411 1.265095 TGAGCTTACGTTTCGTCTCGT 59.735 47.619 0.00 0.00 41.54 4.18
411 412 1.959747 TGAGCTTACGTTTCGTCTCG 58.040 50.000 0.00 0.00 41.54 4.04
412 413 5.094134 AGTAATGAGCTTACGTTTCGTCTC 58.906 41.667 0.00 0.91 43.78 3.36
413 414 5.056894 AGTAATGAGCTTACGTTTCGTCT 57.943 39.130 0.00 0.00 43.78 4.18
414 415 6.859715 TTAGTAATGAGCTTACGTTTCGTC 57.140 37.500 0.00 0.00 43.78 4.20
415 416 8.186821 AGTATTAGTAATGAGCTTACGTTTCGT 58.813 33.333 5.61 0.00 43.78 3.85
416 417 8.557869 AGTATTAGTAATGAGCTTACGTTTCG 57.442 34.615 5.61 0.00 43.78 3.46
417 418 9.733219 AGAGTATTAGTAATGAGCTTACGTTTC 57.267 33.333 5.61 0.00 43.78 2.78
453 454 9.740710 AGAAAGTAGTGCTAAAATAAACCAGAT 57.259 29.630 0.00 0.00 0.00 2.90
469 470 7.385205 ACACACATAAAGCACTAGAAAGTAGTG 59.615 37.037 7.66 7.66 45.62 2.74
470 471 7.442656 ACACACATAAAGCACTAGAAAGTAGT 58.557 34.615 0.00 0.00 33.48 2.73
471 472 7.891183 ACACACATAAAGCACTAGAAAGTAG 57.109 36.000 0.00 0.00 33.48 2.57
472 473 8.671384 AAACACACATAAAGCACTAGAAAGTA 57.329 30.769 0.00 0.00 33.48 2.24
473 474 7.568199 AAACACACATAAAGCACTAGAAAGT 57.432 32.000 0.00 0.00 35.91 2.66
474 475 9.944663 TTTAAACACACATAAAGCACTAGAAAG 57.055 29.630 0.00 0.00 0.00 2.62
475 476 9.944663 CTTTAAACACACATAAAGCACTAGAAA 57.055 29.630 0.00 0.00 33.72 2.52
476 477 9.116067 ACTTTAAACACACATAAAGCACTAGAA 57.884 29.630 0.00 0.00 40.93 2.10
477 478 8.556194 CACTTTAAACACACATAAAGCACTAGA 58.444 33.333 0.00 0.00 40.93 2.43
478 479 8.342634 ACACTTTAAACACACATAAAGCACTAG 58.657 33.333 5.45 0.00 40.93 2.57
479 480 8.215926 ACACTTTAAACACACATAAAGCACTA 57.784 30.769 5.45 0.00 40.93 2.74
480 481 7.095695 ACACTTTAAACACACATAAAGCACT 57.904 32.000 5.45 0.00 40.93 4.40
481 482 7.911205 TGTACACTTTAAACACACATAAAGCAC 59.089 33.333 0.00 3.20 40.93 4.40
482 483 7.986562 TGTACACTTTAAACACACATAAAGCA 58.013 30.769 0.00 0.00 40.93 3.91
483 484 8.844441 TTGTACACTTTAAACACACATAAAGC 57.156 30.769 0.00 0.00 40.93 3.51
484 485 9.997482 ACTTGTACACTTTAAACACACATAAAG 57.003 29.630 0.00 4.26 42.25 1.85
485 486 9.776158 CACTTGTACACTTTAAACACACATAAA 57.224 29.630 0.00 0.00 0.00 1.40
486 487 8.948145 ACACTTGTACACTTTAAACACACATAA 58.052 29.630 0.00 0.00 0.00 1.90
487 488 8.495361 ACACTTGTACACTTTAAACACACATA 57.505 30.769 0.00 0.00 0.00 2.29
488 489 7.385778 ACACTTGTACACTTTAAACACACAT 57.614 32.000 0.00 0.00 0.00 3.21
489 490 6.804770 ACACTTGTACACTTTAAACACACA 57.195 33.333 0.00 0.00 0.00 3.72
490 491 9.777575 ATTAACACTTGTACACTTTAAACACAC 57.222 29.630 0.00 0.00 0.00 3.82
507 508 8.630054 TGAACAATAGCCAAGTATTAACACTT 57.370 30.769 0.00 0.00 39.34 3.16
508 509 8.677300 CATGAACAATAGCCAAGTATTAACACT 58.323 33.333 0.00 0.00 0.00 3.55
509 510 8.458843 ACATGAACAATAGCCAAGTATTAACAC 58.541 33.333 0.00 0.00 0.00 3.32
510 511 8.574251 ACATGAACAATAGCCAAGTATTAACA 57.426 30.769 0.00 0.00 0.00 2.41
516 517 9.899661 AACTTATACATGAACAATAGCCAAGTA 57.100 29.630 0.00 0.00 0.00 2.24
517 518 8.807948 AACTTATACATGAACAATAGCCAAGT 57.192 30.769 0.00 0.00 0.00 3.16
518 519 9.507280 CAAACTTATACATGAACAATAGCCAAG 57.493 33.333 0.00 0.00 0.00 3.61
519 520 7.973388 GCAAACTTATACATGAACAATAGCCAA 59.027 33.333 0.00 0.00 0.00 4.52
520 521 7.339212 AGCAAACTTATACATGAACAATAGCCA 59.661 33.333 0.00 0.00 0.00 4.75
521 522 7.707104 AGCAAACTTATACATGAACAATAGCC 58.293 34.615 0.00 0.00 0.00 3.93
522 523 9.573133 AAAGCAAACTTATACATGAACAATAGC 57.427 29.630 0.00 0.00 34.05 2.97
533 534 9.781633 TGGAGTACTTTAAAGCAAACTTATACA 57.218 29.630 15.24 10.54 34.05 2.29
536 537 8.957466 GGATGGAGTACTTTAAAGCAAACTTAT 58.043 33.333 15.24 13.02 34.05 1.73
537 538 7.118680 CGGATGGAGTACTTTAAAGCAAACTTA 59.881 37.037 15.24 9.63 34.05 2.24
538 539 6.072673 CGGATGGAGTACTTTAAAGCAAACTT 60.073 38.462 15.24 2.49 37.90 2.66
539 540 5.411669 CGGATGGAGTACTTTAAAGCAAACT 59.588 40.000 15.24 14.99 0.00 2.66
540 541 5.180680 ACGGATGGAGTACTTTAAAGCAAAC 59.819 40.000 15.24 10.77 0.00 2.93
541 542 5.310451 ACGGATGGAGTACTTTAAAGCAAA 58.690 37.500 15.24 0.00 0.00 3.68
542 543 4.901868 ACGGATGGAGTACTTTAAAGCAA 58.098 39.130 15.24 0.90 0.00 3.91
543 544 4.501071 GACGGATGGAGTACTTTAAAGCA 58.499 43.478 15.24 5.12 0.00 3.91
544 545 3.869832 GGACGGATGGAGTACTTTAAAGC 59.130 47.826 15.24 0.00 0.00 3.51
545 546 4.110482 CGGACGGATGGAGTACTTTAAAG 58.890 47.826 13.76 13.76 0.00 1.85
546 547 3.119029 CCGGACGGATGGAGTACTTTAAA 60.119 47.826 4.40 0.00 37.50 1.52
547 548 2.428171 CCGGACGGATGGAGTACTTTAA 59.572 50.000 4.40 0.00 37.50 1.52
548 549 2.026641 CCGGACGGATGGAGTACTTTA 58.973 52.381 4.40 0.00 37.50 1.85
549 550 0.822164 CCGGACGGATGGAGTACTTT 59.178 55.000 4.40 0.00 37.50 2.66
550 551 0.033796 TCCGGACGGATGGAGTACTT 60.034 55.000 9.76 0.00 39.76 2.24
551 552 0.033796 TTCCGGACGGATGGAGTACT 60.034 55.000 14.89 0.00 44.74 2.73
552 553 0.819582 TTTCCGGACGGATGGAGTAC 59.180 55.000 14.89 0.00 44.74 2.73
553 554 1.784358 ATTTCCGGACGGATGGAGTA 58.216 50.000 14.89 0.00 44.74 2.59
554 555 1.411612 GTATTTCCGGACGGATGGAGT 59.588 52.381 14.89 0.00 44.74 3.85
555 556 1.687123 AGTATTTCCGGACGGATGGAG 59.313 52.381 14.89 0.00 44.74 3.86
556 557 1.784358 AGTATTTCCGGACGGATGGA 58.216 50.000 14.89 4.49 44.74 3.41
557 558 2.210116 CAAGTATTTCCGGACGGATGG 58.790 52.381 14.89 0.00 44.74 3.51
558 559 2.864343 GACAAGTATTTCCGGACGGATG 59.136 50.000 14.89 10.86 44.74 3.51
559 560 2.498481 TGACAAGTATTTCCGGACGGAT 59.502 45.455 14.89 3.07 44.74 4.18
560 561 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
561 562 2.373540 TGACAAGTATTTCCGGACGG 57.626 50.000 1.83 3.96 0.00 4.79
562 563 3.517602 TGATGACAAGTATTTCCGGACG 58.482 45.455 1.83 0.00 0.00 4.79
563 564 5.873179 TTTGATGACAAGTATTTCCGGAC 57.127 39.130 1.83 0.00 37.32 4.79
564 565 6.657117 TCATTTTGATGACAAGTATTTCCGGA 59.343 34.615 0.00 0.00 37.32 5.14
565 566 6.851609 TCATTTTGATGACAAGTATTTCCGG 58.148 36.000 0.00 0.00 37.32 5.14
566 567 8.915871 ATTCATTTTGATGACAAGTATTTCCG 57.084 30.769 0.00 0.00 37.32 4.30
572 573 9.177608 CCCTTCTATTCATTTTGATGACAAGTA 57.822 33.333 0.00 0.00 37.32 2.24
573 574 7.123247 CCCCTTCTATTCATTTTGATGACAAGT 59.877 37.037 0.00 0.00 37.32 3.16
574 575 7.340232 TCCCCTTCTATTCATTTTGATGACAAG 59.660 37.037 0.00 0.00 37.32 3.16
575 576 7.181361 TCCCCTTCTATTCATTTTGATGACAA 58.819 34.615 0.00 0.00 0.00 3.18
576 577 6.730447 TCCCCTTCTATTCATTTTGATGACA 58.270 36.000 0.00 0.00 0.00 3.58
577 578 7.286316 ACATCCCCTTCTATTCATTTTGATGAC 59.714 37.037 0.00 0.00 32.39 3.06
578 579 7.356680 ACATCCCCTTCTATTCATTTTGATGA 58.643 34.615 0.00 0.00 32.39 2.92
579 580 7.592885 ACATCCCCTTCTATTCATTTTGATG 57.407 36.000 0.00 0.00 33.80 3.07
580 581 9.525826 GATACATCCCCTTCTATTCATTTTGAT 57.474 33.333 0.00 0.00 0.00 2.57
581 582 8.727149 AGATACATCCCCTTCTATTCATTTTGA 58.273 33.333 0.00 0.00 0.00 2.69
582 583 8.930846 AGATACATCCCCTTCTATTCATTTTG 57.069 34.615 0.00 0.00 0.00 2.44
584 585 9.621239 TCTAGATACATCCCCTTCTATTCATTT 57.379 33.333 0.00 0.00 0.00 2.32
585 586 9.796242 ATCTAGATACATCCCCTTCTATTCATT 57.204 33.333 2.53 0.00 0.00 2.57
586 587 9.211410 CATCTAGATACATCCCCTTCTATTCAT 57.789 37.037 4.54 0.00 0.00 2.57
587 588 8.180165 ACATCTAGATACATCCCCTTCTATTCA 58.820 37.037 4.54 0.00 0.00 2.57
588 589 8.602472 ACATCTAGATACATCCCCTTCTATTC 57.398 38.462 4.54 0.00 0.00 1.75
639 640 9.834628 GAAAATACTTGTCGTCAAAATGGATAA 57.165 29.630 0.00 0.00 32.87 1.75
640 641 8.172484 CGAAAATACTTGTCGTCAAAATGGATA 58.828 33.333 0.00 0.00 32.87 2.59
641 642 7.021196 CGAAAATACTTGTCGTCAAAATGGAT 58.979 34.615 0.00 0.00 32.87 3.41
642 643 6.367421 CGAAAATACTTGTCGTCAAAATGGA 58.633 36.000 0.00 0.00 32.87 3.41
643 644 5.567534 CCGAAAATACTTGTCGTCAAAATGG 59.432 40.000 0.00 0.00 32.87 3.16
644 645 6.302313 GTCCGAAAATACTTGTCGTCAAAATG 59.698 38.462 0.00 0.00 32.87 2.32
645 646 6.204108 AGTCCGAAAATACTTGTCGTCAAAAT 59.796 34.615 0.00 0.00 32.87 1.82
646 647 5.524646 AGTCCGAAAATACTTGTCGTCAAAA 59.475 36.000 0.00 0.00 32.87 2.44
647 648 5.050634 CAGTCCGAAAATACTTGTCGTCAAA 60.051 40.000 0.00 0.00 32.87 2.69
648 649 4.446385 CAGTCCGAAAATACTTGTCGTCAA 59.554 41.667 0.00 0.00 32.93 3.18
649 650 3.985279 CAGTCCGAAAATACTTGTCGTCA 59.015 43.478 0.00 0.00 32.93 4.35
650 651 4.232221 TCAGTCCGAAAATACTTGTCGTC 58.768 43.478 0.00 0.00 32.93 4.20
651 652 4.235360 CTCAGTCCGAAAATACTTGTCGT 58.765 43.478 0.00 0.00 32.93 4.34
652 653 3.612860 CCTCAGTCCGAAAATACTTGTCG 59.387 47.826 0.00 0.00 34.58 4.35
653 654 3.933332 CCCTCAGTCCGAAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
654 655 3.581332 TCCCTCAGTCCGAAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
655 656 4.184629 CTCCCTCAGTCCGAAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
656 657 3.838903 ACTCCCTCAGTCCGAAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
657 658 3.442076 ACTCCCTCAGTCCGAAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
658 659 3.889520 ACTCCCTCAGTCCGAAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
659 660 5.266788 TCTTACTCCCTCAGTCCGAAAATA 58.733 41.667 0.00 0.00 36.43 1.40
660 661 4.094476 TCTTACTCCCTCAGTCCGAAAAT 58.906 43.478 0.00 0.00 36.43 1.82
661 662 3.503365 TCTTACTCCCTCAGTCCGAAAA 58.497 45.455 0.00 0.00 36.43 2.29
662 663 3.090037 CTCTTACTCCCTCAGTCCGAAA 58.910 50.000 0.00 0.00 36.43 3.46
663 664 2.307980 TCTCTTACTCCCTCAGTCCGAA 59.692 50.000 0.00 0.00 36.43 4.30
664 665 1.914108 TCTCTTACTCCCTCAGTCCGA 59.086 52.381 0.00 0.00 36.43 4.55
665 666 2.092861 TCTCTCTTACTCCCTCAGTCCG 60.093 54.545 0.00 0.00 36.43 4.79
666 667 3.201266 TCTCTCTCTTACTCCCTCAGTCC 59.799 52.174 0.00 0.00 36.43 3.85
667 668 4.163458 TCTCTCTCTCTTACTCCCTCAGTC 59.837 50.000 0.00 0.00 36.43 3.51
668 669 4.108570 TCTCTCTCTCTTACTCCCTCAGT 58.891 47.826 0.00 0.00 39.41 3.41
669 670 4.444876 CCTCTCTCTCTCTTACTCCCTCAG 60.445 54.167 0.00 0.00 0.00 3.35
670 671 3.458118 CCTCTCTCTCTCTTACTCCCTCA 59.542 52.174 0.00 0.00 0.00 3.86
671 672 3.181443 CCCTCTCTCTCTCTTACTCCCTC 60.181 56.522 0.00 0.00 0.00 4.30
672 673 2.783510 CCCTCTCTCTCTCTTACTCCCT 59.216 54.545 0.00 0.00 0.00 4.20
673 674 2.512476 ACCCTCTCTCTCTCTTACTCCC 59.488 54.545 0.00 0.00 0.00 4.30
674 675 3.053917 ACACCCTCTCTCTCTCTTACTCC 60.054 52.174 0.00 0.00 0.00 3.85
675 676 3.945285 CACACCCTCTCTCTCTCTTACTC 59.055 52.174 0.00 0.00 0.00 2.59
676 677 3.332485 ACACACCCTCTCTCTCTCTTACT 59.668 47.826 0.00 0.00 0.00 2.24
677 678 3.442273 CACACACCCTCTCTCTCTCTTAC 59.558 52.174 0.00 0.00 0.00 2.34
678 679 3.074687 ACACACACCCTCTCTCTCTCTTA 59.925 47.826 0.00 0.00 0.00 2.10
679 680 2.158385 ACACACACCCTCTCTCTCTCTT 60.158 50.000 0.00 0.00 0.00 2.85
680 681 1.427368 ACACACACCCTCTCTCTCTCT 59.573 52.381 0.00 0.00 0.00 3.10
681 682 1.543802 CACACACACCCTCTCTCTCTC 59.456 57.143 0.00 0.00 0.00 3.20
682 683 1.133325 ACACACACACCCTCTCTCTCT 60.133 52.381 0.00 0.00 0.00 3.10
683 684 1.000283 CACACACACACCCTCTCTCTC 60.000 57.143 0.00 0.00 0.00 3.20
684 685 1.043816 CACACACACACCCTCTCTCT 58.956 55.000 0.00 0.00 0.00 3.10
685 686 0.753262 ACACACACACACCCTCTCTC 59.247 55.000 0.00 0.00 0.00 3.20
686 687 1.204146 AACACACACACACCCTCTCT 58.796 50.000 0.00 0.00 0.00 3.10
687 688 2.038387 AAACACACACACACCCTCTC 57.962 50.000 0.00 0.00 0.00 3.20
688 689 2.507407 AAAACACACACACACCCTCT 57.493 45.000 0.00 0.00 0.00 3.69
689 690 4.705337 TTAAAAACACACACACACCCTC 57.295 40.909 0.00 0.00 0.00 4.30
690 691 5.046950 ACAATTAAAAACACACACACACCCT 60.047 36.000 0.00 0.00 0.00 4.34
691 692 5.062809 CACAATTAAAAACACACACACACCC 59.937 40.000 0.00 0.00 0.00 4.61
692 693 5.864474 TCACAATTAAAAACACACACACACC 59.136 36.000 0.00 0.00 0.00 4.16
693 694 6.453659 GCTCACAATTAAAAACACACACACAC 60.454 38.462 0.00 0.00 0.00 3.82
694 695 5.574830 GCTCACAATTAAAAACACACACACA 59.425 36.000 0.00 0.00 0.00 3.72
695 696 5.804979 AGCTCACAATTAAAAACACACACAC 59.195 36.000 0.00 0.00 0.00 3.82
696 697 5.804473 CAGCTCACAATTAAAAACACACACA 59.196 36.000 0.00 0.00 0.00 3.72
697 698 5.231991 CCAGCTCACAATTAAAAACACACAC 59.768 40.000 0.00 0.00 0.00 3.82
698 699 5.347342 CCAGCTCACAATTAAAAACACACA 58.653 37.500 0.00 0.00 0.00 3.72
699 700 4.744631 CCCAGCTCACAATTAAAAACACAC 59.255 41.667 0.00 0.00 0.00 3.82
700 701 4.202202 CCCCAGCTCACAATTAAAAACACA 60.202 41.667 0.00 0.00 0.00 3.72
701 702 4.306600 CCCCAGCTCACAATTAAAAACAC 58.693 43.478 0.00 0.00 0.00 3.32
702 703 3.244044 GCCCCAGCTCACAATTAAAAACA 60.244 43.478 0.00 0.00 35.50 2.83
703 704 3.325870 GCCCCAGCTCACAATTAAAAAC 58.674 45.455 0.00 0.00 35.50 2.43
704 705 2.029470 CGCCCCAGCTCACAATTAAAAA 60.029 45.455 0.00 0.00 36.60 1.94
705 706 1.543802 CGCCCCAGCTCACAATTAAAA 59.456 47.619 0.00 0.00 36.60 1.52
706 707 1.173043 CGCCCCAGCTCACAATTAAA 58.827 50.000 0.00 0.00 36.60 1.52
707 708 1.312371 GCGCCCCAGCTCACAATTAA 61.312 55.000 0.00 0.00 36.60 1.40
708 709 1.748879 GCGCCCCAGCTCACAATTA 60.749 57.895 0.00 0.00 36.60 1.40
709 710 3.064324 GCGCCCCAGCTCACAATT 61.064 61.111 0.00 0.00 36.60 2.32
710 711 4.039092 AGCGCCCCAGCTCACAAT 62.039 61.111 2.29 0.00 45.67 2.71
721 722 4.632974 CTATCCTGCCCAGCGCCC 62.633 72.222 2.29 0.00 36.24 6.13
722 723 2.403132 ATTCTATCCTGCCCAGCGCC 62.403 60.000 2.29 0.00 36.24 6.53
723 724 0.952984 GATTCTATCCTGCCCAGCGC 60.953 60.000 0.00 0.00 38.31 5.92
724 725 0.668706 CGATTCTATCCTGCCCAGCG 60.669 60.000 0.00 0.00 0.00 5.18
725 726 0.321122 CCGATTCTATCCTGCCCAGC 60.321 60.000 0.00 0.00 0.00 4.85
726 727 0.322975 CCCGATTCTATCCTGCCCAG 59.677 60.000 0.00 0.00 0.00 4.45
727 728 1.768684 GCCCGATTCTATCCTGCCCA 61.769 60.000 0.00 0.00 0.00 5.36
728 729 1.003233 GCCCGATTCTATCCTGCCC 60.003 63.158 0.00 0.00 0.00 5.36
729 730 0.108585 TTGCCCGATTCTATCCTGCC 59.891 55.000 0.00 0.00 0.00 4.85
730 731 1.230324 GTTGCCCGATTCTATCCTGC 58.770 55.000 0.00 0.00 0.00 4.85
731 732 1.884235 GGTTGCCCGATTCTATCCTG 58.116 55.000 0.00 0.00 0.00 3.86
754 755 4.546570 CGCCCGATTCTTTTTCTCTTTTT 58.453 39.130 0.00 0.00 0.00 1.94
755 756 3.611766 GCGCCCGATTCTTTTTCTCTTTT 60.612 43.478 0.00 0.00 0.00 2.27
756 757 2.095212 GCGCCCGATTCTTTTTCTCTTT 60.095 45.455 0.00 0.00 0.00 2.52
757 758 1.468914 GCGCCCGATTCTTTTTCTCTT 59.531 47.619 0.00 0.00 0.00 2.85
758 759 1.087501 GCGCCCGATTCTTTTTCTCT 58.912 50.000 0.00 0.00 0.00 3.10
759 760 1.062733 GAGCGCCCGATTCTTTTTCTC 59.937 52.381 2.29 0.00 0.00 2.87
760 761 1.087501 GAGCGCCCGATTCTTTTTCT 58.912 50.000 2.29 0.00 0.00 2.52
761 762 0.802494 TGAGCGCCCGATTCTTTTTC 59.198 50.000 2.29 0.00 0.00 2.29
762 763 0.521735 GTGAGCGCCCGATTCTTTTT 59.478 50.000 2.29 0.00 0.00 1.94
763 764 1.305930 GGTGAGCGCCCGATTCTTTT 61.306 55.000 2.29 0.00 0.00 2.27
764 765 1.745489 GGTGAGCGCCCGATTCTTT 60.745 57.895 2.29 0.00 0.00 2.52
765 766 2.125106 GGTGAGCGCCCGATTCTT 60.125 61.111 2.29 0.00 0.00 2.52
819 824 3.119955 GGTTCTGTTCTAACCCATTTCGC 60.120 47.826 0.00 0.00 40.49 4.70
820 825 4.680171 GGTTCTGTTCTAACCCATTTCG 57.320 45.455 0.00 0.00 40.49 3.46
900 916 1.676968 GGGTTTGTGGGAAATGGCC 59.323 57.895 0.00 0.00 0.00 5.36
901 917 1.124477 TGGGGTTTGTGGGAAATGGC 61.124 55.000 0.00 0.00 0.00 4.40
1142 1169 3.691342 CCCACAGGGTCGCGAAGA 61.691 66.667 12.06 0.00 38.25 2.87
1251 1278 1.228245 GCTGGCCTTCAGAACCACA 60.228 57.895 3.32 0.00 46.18 4.17
1253 1280 1.846261 AAGCTGGCCTTCAGAACCA 59.154 52.632 3.32 0.00 46.18 3.67
1299 1335 3.332493 GAACTGGCCGCACAGCATG 62.332 63.158 0.00 0.00 42.21 4.06
1331 1367 0.320247 GGATCCAGATACAGCCGCAG 60.320 60.000 6.95 0.00 0.00 5.18
1393 4911 4.437930 CCTCAGTTCAATCGAAGGAAATGC 60.438 45.833 18.99 3.75 38.56 3.56
1411 4929 2.038164 TGCTGCCTATCTAATGCCTCAG 59.962 50.000 0.00 0.00 0.00 3.35
1414 4932 2.813354 GCTTGCTGCCTATCTAATGCCT 60.813 50.000 0.00 0.00 35.15 4.75
1419 4937 4.163427 AGGATAGCTTGCTGCCTATCTAA 58.837 43.478 17.86 0.00 44.23 2.10
1454 4995 8.410912 AGAATGATGGACATGTGAATATTGTTG 58.589 33.333 1.15 0.00 39.39 3.33
1460 5001 9.850198 TTGATTAGAATGATGGACATGTGAATA 57.150 29.630 1.15 0.00 39.39 1.75
1474 5015 6.825213 CCATCAGGACAACTTGATTAGAATGA 59.175 38.462 0.00 0.00 40.10 2.57
1512 5072 7.217200 ACTCACATGAAACACTACACTACATT 58.783 34.615 0.00 0.00 0.00 2.71
1550 5111 1.824230 TGGAATGGGCCGAAAATTGAG 59.176 47.619 0.00 0.00 0.00 3.02
1624 5189 1.425066 TCCTGGTTGAAAGCTCCATGT 59.575 47.619 0.00 0.00 0.00 3.21
1696 5267 0.618458 TTAGCAGGATGAAGGGCGTT 59.382 50.000 0.00 0.00 39.69 4.84
1949 5544 5.357878 AGACCAATAATGTGCACAAGGTATG 59.642 40.000 25.72 17.86 0.00 2.39
1953 5548 3.129287 GGAGACCAATAATGTGCACAAGG 59.871 47.826 25.72 20.99 0.00 3.61
2271 5902 5.772169 TGGTGATCTATCAGTAGTCATCTGG 59.228 44.000 0.00 0.00 37.51 3.86
2278 5909 7.324178 GTTTTCACTGGTGATCTATCAGTAGT 58.676 38.462 13.07 0.00 39.43 2.73
2393 6183 2.043526 ACCCAGCCCTTTGAAATCTGAT 59.956 45.455 4.34 0.00 0.00 2.90
2500 6296 6.592994 TGAGATTCTGTTTGCTATCTTCACTG 59.407 38.462 0.00 0.00 0.00 3.66
2553 6359 6.309712 ACATATCACAATCATGCTACAAGC 57.690 37.500 0.00 0.00 42.82 4.01
2554 6360 8.822652 TCTACATATCACAATCATGCTACAAG 57.177 34.615 0.00 0.00 0.00 3.16
2555 6361 8.424133 ACTCTACATATCACAATCATGCTACAA 58.576 33.333 0.00 0.00 0.00 2.41
2556 6362 7.955918 ACTCTACATATCACAATCATGCTACA 58.044 34.615 0.00 0.00 0.00 2.74
2864 8550 5.372343 TGGAACTAATGGCATCATGTAGT 57.628 39.130 0.00 1.77 33.19 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.