Multiple sequence alignment - TraesCS2B01G140300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G140300 chr2B 100.000 3170 0 0 1 3170 106953487 106956656 0.000000e+00 5854.0
1 TraesCS2B01G140300 chr2B 100.000 509 0 0 3528 4036 106957014 106957522 0.000000e+00 941.0
2 TraesCS2B01G140300 chr2B 81.379 145 19 8 3565 3705 394150733 394150593 1.190000e-20 111.0
3 TraesCS2B01G140300 chr2D 86.663 1642 105 47 367 1984 70622523 70624074 0.000000e+00 1714.0
4 TraesCS2B01G140300 chr2D 87.820 665 41 21 2502 3153 70624832 70625469 0.000000e+00 743.0
5 TraesCS2B01G140300 chr2D 87.329 513 58 6 3528 4036 70629111 70629620 7.520000e-162 580.0
6 TraesCS2B01G140300 chr2D 84.030 526 51 10 3528 4035 70626655 70627165 3.650000e-130 475.0
7 TraesCS2B01G140300 chr2D 84.385 301 35 8 2139 2427 70624334 70624634 6.600000e-73 285.0
8 TraesCS2B01G140300 chr2D 83.486 218 27 8 3812 4026 575322371 575322160 1.140000e-45 195.0
9 TraesCS2B01G140300 chr2D 97.619 42 1 0 2045 2086 32020805 32020764 5.600000e-09 73.1
10 TraesCS2B01G140300 chr2A 85.489 1392 90 40 630 1974 70101690 70103016 0.000000e+00 1349.0
11 TraesCS2B01G140300 chr2A 81.952 1086 76 59 2139 3153 70103438 70104474 0.000000e+00 809.0
12 TraesCS2B01G140300 chr2A 82.409 523 58 9 3528 4030 70104721 70105229 3.730000e-115 425.0
13 TraesCS2B01G140300 chr2A 95.833 48 1 1 2041 2087 19379137 19379090 4.330000e-10 76.8
14 TraesCS2B01G140300 chr2A 95.652 46 1 1 2041 2086 73546207 73546163 5.600000e-09 73.1
15 TraesCS2B01G140300 chr4A 79.819 441 56 26 2609 3030 739971576 739971150 1.420000e-74 291.0
16 TraesCS2B01G140300 chr4A 79.918 244 41 5 1050 1288 216145464 216145704 5.360000e-39 172.0
17 TraesCS2B01G140300 chr4B 93.264 193 9 3 173 362 633777018 633776827 8.540000e-72 281.0
18 TraesCS2B01G140300 chr4B 91.803 183 11 2 172 350 633776605 633776787 6.700000e-63 252.0
19 TraesCS2B01G140300 chr4B 82.386 176 26 5 3539 3710 492761412 492761238 9.040000e-32 148.0
20 TraesCS2B01G140300 chr1B 92.090 177 11 2 176 349 482168216 482168392 3.120000e-61 246.0
21 TraesCS2B01G140300 chr1B 91.057 123 8 3 1 120 161317450 161317572 3.230000e-36 163.0
22 TraesCS2B01G140300 chr1B 90.244 82 6 1 983 1064 683487576 683487655 5.520000e-19 106.0
23 TraesCS2B01G140300 chr5B 94.161 137 6 1 172 306 145931706 145931570 1.470000e-49 207.0
24 TraesCS2B01G140300 chr5B 90.991 111 7 3 13 120 622203162 622203052 3.250000e-31 147.0
25 TraesCS2B01G140300 chr5B 97.872 47 1 0 2041 2087 554645094 554645048 9.300000e-12 82.4
26 TraesCS2B01G140300 chr4D 82.126 207 34 3 1072 1277 288429441 288429645 1.490000e-39 174.0
27 TraesCS2B01G140300 chr4D 81.564 179 26 6 3537 3710 399221960 399221784 1.510000e-29 141.0
28 TraesCS2B01G140300 chr4D 97.727 44 1 0 2044 2087 418772413 418772456 4.330000e-10 76.8
29 TraesCS2B01G140300 chr4D 86.885 61 7 1 2044 2104 95799456 95799515 2.600000e-07 67.6
30 TraesCS2B01G140300 chr7A 90.083 121 8 3 4 120 658682594 658682474 1.940000e-33 154.0
31 TraesCS2B01G140300 chr7A 95.652 46 1 1 2041 2086 399804536 399804492 5.600000e-09 73.1
32 TraesCS2B01G140300 chr5A 89.516 124 9 2 1 120 456461678 456461801 1.940000e-33 154.0
33 TraesCS2B01G140300 chr5A 83.607 122 17 3 3584 3704 691675152 691675271 1.190000e-20 111.0
34 TraesCS2B01G140300 chr5A 95.745 47 2 0 2041 2087 429750525 429750479 4.330000e-10 76.8
35 TraesCS2B01G140300 chr7B 89.344 122 10 3 2 120 565095886 565096007 2.510000e-32 150.0
36 TraesCS2B01G140300 chr6B 89.431 123 7 5 1 120 21323961 21324080 2.510000e-32 150.0
37 TraesCS2B01G140300 chr5D 89.831 118 10 1 5 120 276915480 276915363 2.510000e-32 150.0
38 TraesCS2B01G140300 chr5D 77.564 156 32 3 3555 3709 333557763 333557916 1.540000e-14 91.6
39 TraesCS2B01G140300 chrUn 88.618 123 11 3 1 120 17018779 17018901 3.250000e-31 147.0
40 TraesCS2B01G140300 chr3A 89.256 121 8 5 4 120 578950397 578950278 3.250000e-31 147.0
41 TraesCS2B01G140300 chr3A 82.645 121 18 3 3582 3700 627970096 627969977 1.980000e-18 104.0
42 TraesCS2B01G140300 chr1D 91.509 106 6 2 170 273 193993441 193993545 4.200000e-30 143.0
43 TraesCS2B01G140300 chr6D 97.778 45 1 0 2043 2087 199210325 199210369 1.200000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G140300 chr2B 106953487 106957522 4035 False 3397.5 5854 100.000000 1 4036 2 chr2B.!!$F1 4035
1 TraesCS2B01G140300 chr2D 70622523 70629620 7097 False 759.4 1714 86.045400 367 4036 5 chr2D.!!$F1 3669
2 TraesCS2B01G140300 chr2A 70101690 70105229 3539 False 861.0 1349 83.283333 630 4030 3 chr2A.!!$F1 3400

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
187 188 0.039764 ACGGGACAGAGATCAGGTGA 59.960 55.0 0.00 0.0 0.00 4.02 F
280 281 0.099968 ATCATGCATGTTCGCAGCAC 59.900 50.0 25.43 0.0 46.99 4.40 F
1846 1919 0.108138 CACGGTGATCTTGGGACTCC 60.108 60.0 0.74 0.0 0.00 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2124 2564 0.034896 CGTTGGAGGGTTGCACTAGT 59.965 55.0 0.0 0.0 0.00 2.57 R
2125 2565 0.034896 ACGTTGGAGGGTTGCACTAG 59.965 55.0 0.0 0.0 0.00 2.57 R
3065 3684 0.037232 GTCCACGGAGACCAAGAAGG 60.037 60.0 0.0 0.0 45.67 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.634453 GGCCCATCCCATTAAAATCAGG 59.366 50.000 0.00 0.00 0.00 3.86
23 24 2.634453 GCCCATCCCATTAAAATCAGGG 59.366 50.000 0.00 0.00 42.86 4.45
24 25 3.242011 CCCATCCCATTAAAATCAGGGG 58.758 50.000 0.00 0.00 41.77 4.79
25 26 3.242011 CCATCCCATTAAAATCAGGGGG 58.758 50.000 0.00 0.00 41.77 5.40
27 28 4.555689 CATCCCATTAAAATCAGGGGGAA 58.444 43.478 0.00 0.00 46.88 3.97
28 29 4.701333 TCCCATTAAAATCAGGGGGAAA 57.299 40.909 0.00 0.00 41.45 3.13
29 30 5.233582 TCCCATTAAAATCAGGGGGAAAT 57.766 39.130 0.00 0.00 41.45 2.17
30 31 4.968080 TCCCATTAAAATCAGGGGGAAATG 59.032 41.667 0.00 0.00 41.45 2.32
31 32 4.968080 CCCATTAAAATCAGGGGGAAATGA 59.032 41.667 0.00 0.00 37.80 2.57
32 33 5.608015 CCCATTAAAATCAGGGGGAAATGAT 59.392 40.000 0.00 0.00 37.80 2.45
33 34 6.101588 CCCATTAAAATCAGGGGGAAATGATT 59.898 38.462 0.00 0.00 45.67 2.57
34 35 7.292120 CCCATTAAAATCAGGGGGAAATGATTA 59.708 37.037 1.20 0.00 43.56 1.75
35 36 8.370182 CCATTAAAATCAGGGGGAAATGATTAG 58.630 37.037 1.20 0.00 43.56 1.73
36 37 9.146586 CATTAAAATCAGGGGGAAATGATTAGA 57.853 33.333 1.20 0.00 43.56 2.10
37 38 9.903190 ATTAAAATCAGGGGGAAATGATTAGAT 57.097 29.630 1.20 0.00 43.56 1.98
38 39 9.728100 TTAAAATCAGGGGGAAATGATTAGATT 57.272 29.630 1.20 0.00 43.56 2.40
39 40 7.607615 AAATCAGGGGGAAATGATTAGATTG 57.392 36.000 1.20 0.00 43.56 2.67
40 41 5.065613 TCAGGGGGAAATGATTAGATTGG 57.934 43.478 0.00 0.00 0.00 3.16
41 42 4.731416 TCAGGGGGAAATGATTAGATTGGA 59.269 41.667 0.00 0.00 0.00 3.53
42 43 5.195553 TCAGGGGGAAATGATTAGATTGGAA 59.804 40.000 0.00 0.00 0.00 3.53
43 44 5.898972 CAGGGGGAAATGATTAGATTGGAAA 59.101 40.000 0.00 0.00 0.00 3.13
44 45 6.041296 CAGGGGGAAATGATTAGATTGGAAAG 59.959 42.308 0.00 0.00 0.00 2.62
45 46 5.305386 GGGGGAAATGATTAGATTGGAAAGG 59.695 44.000 0.00 0.00 0.00 3.11
46 47 6.136155 GGGGAAATGATTAGATTGGAAAGGA 58.864 40.000 0.00 0.00 0.00 3.36
47 48 6.611236 GGGGAAATGATTAGATTGGAAAGGAA 59.389 38.462 0.00 0.00 0.00 3.36
48 49 7.125659 GGGGAAATGATTAGATTGGAAAGGAAA 59.874 37.037 0.00 0.00 0.00 3.13
49 50 8.539544 GGGAAATGATTAGATTGGAAAGGAAAA 58.460 33.333 0.00 0.00 0.00 2.29
50 51 9.942850 GGAAATGATTAGATTGGAAAGGAAAAA 57.057 29.630 0.00 0.00 0.00 1.94
82 83 2.620251 CGTAGGATGAAATGGGAGCA 57.380 50.000 0.00 0.00 0.00 4.26
83 84 3.131709 CGTAGGATGAAATGGGAGCAT 57.868 47.619 0.00 0.00 0.00 3.79
84 85 4.271696 CGTAGGATGAAATGGGAGCATA 57.728 45.455 0.00 0.00 0.00 3.14
85 86 4.248859 CGTAGGATGAAATGGGAGCATAG 58.751 47.826 0.00 0.00 0.00 2.23
86 87 4.021104 CGTAGGATGAAATGGGAGCATAGA 60.021 45.833 0.00 0.00 0.00 1.98
87 88 5.337894 CGTAGGATGAAATGGGAGCATAGAT 60.338 44.000 0.00 0.00 0.00 1.98
88 89 4.919793 AGGATGAAATGGGAGCATAGATG 58.080 43.478 0.00 0.00 0.00 2.90
89 90 4.015084 GGATGAAATGGGAGCATAGATGG 58.985 47.826 0.00 0.00 0.00 3.51
90 91 4.263639 GGATGAAATGGGAGCATAGATGGA 60.264 45.833 0.00 0.00 0.00 3.41
91 92 4.794311 TGAAATGGGAGCATAGATGGAA 57.206 40.909 0.00 0.00 0.00 3.53
92 93 4.722220 TGAAATGGGAGCATAGATGGAAG 58.278 43.478 0.00 0.00 0.00 3.46
93 94 2.875094 ATGGGAGCATAGATGGAAGC 57.125 50.000 0.00 0.00 0.00 3.86
94 95 1.510492 TGGGAGCATAGATGGAAGCA 58.490 50.000 0.00 0.00 0.00 3.91
95 96 2.060275 TGGGAGCATAGATGGAAGCAT 58.940 47.619 0.00 0.00 0.00 3.79
96 97 2.224695 TGGGAGCATAGATGGAAGCATG 60.225 50.000 0.00 0.00 0.00 4.06
97 98 2.434428 GGAGCATAGATGGAAGCATGG 58.566 52.381 0.00 0.00 0.00 3.66
98 99 2.434428 GAGCATAGATGGAAGCATGGG 58.566 52.381 0.00 0.00 0.00 4.00
99 100 2.039480 GAGCATAGATGGAAGCATGGGA 59.961 50.000 0.00 0.00 0.00 4.37
100 101 2.444388 AGCATAGATGGAAGCATGGGAA 59.556 45.455 0.00 0.00 0.00 3.97
101 102 2.818432 GCATAGATGGAAGCATGGGAAG 59.182 50.000 0.00 0.00 0.00 3.46
102 103 3.418995 CATAGATGGAAGCATGGGAAGG 58.581 50.000 0.00 0.00 0.00 3.46
103 104 0.554792 AGATGGAAGCATGGGAAGGG 59.445 55.000 0.00 0.00 0.00 3.95
104 105 0.552848 GATGGAAGCATGGGAAGGGA 59.447 55.000 0.00 0.00 0.00 4.20
105 106 0.554792 ATGGAAGCATGGGAAGGGAG 59.445 55.000 0.00 0.00 0.00 4.30
106 107 1.454663 GGAAGCATGGGAAGGGAGC 60.455 63.158 0.00 0.00 0.00 4.70
107 108 1.304282 GAAGCATGGGAAGGGAGCA 59.696 57.895 0.00 0.00 0.00 4.26
108 109 0.750911 GAAGCATGGGAAGGGAGCAG 60.751 60.000 0.00 0.00 0.00 4.24
109 110 2.123982 GCATGGGAAGGGAGCAGG 60.124 66.667 0.00 0.00 0.00 4.85
110 111 2.123982 CATGGGAAGGGAGCAGGC 60.124 66.667 0.00 0.00 0.00 4.85
111 112 2.614969 ATGGGAAGGGAGCAGGCA 60.615 61.111 0.00 0.00 0.00 4.75
112 113 2.240918 ATGGGAAGGGAGCAGGCAA 61.241 57.895 0.00 0.00 0.00 4.52
113 114 2.044551 GGGAAGGGAGCAGGCAAG 60.045 66.667 0.00 0.00 0.00 4.01
114 115 2.753446 GGAAGGGAGCAGGCAAGC 60.753 66.667 0.00 0.00 0.00 4.01
115 116 2.753446 GAAGGGAGCAGGCAAGCC 60.753 66.667 2.02 2.02 34.23 4.35
116 117 4.729918 AAGGGAGCAGGCAAGCCG 62.730 66.667 5.28 2.12 41.95 5.52
119 120 4.496336 GGAGCAGGCAAGCCGGAT 62.496 66.667 15.46 8.74 41.95 4.18
120 121 3.207669 GAGCAGGCAAGCCGGATG 61.208 66.667 15.46 4.05 41.95 3.51
121 122 4.809496 AGCAGGCAAGCCGGATGG 62.809 66.667 15.46 0.00 41.95 3.51
133 134 4.153957 GGATGGCCCGGATCCTAT 57.846 61.111 10.75 5.66 37.07 2.57
134 135 2.387952 GGATGGCCCGGATCCTATT 58.612 57.895 10.75 0.00 37.07 1.73
135 136 0.698818 GGATGGCCCGGATCCTATTT 59.301 55.000 10.75 0.00 37.07 1.40
136 137 1.340114 GGATGGCCCGGATCCTATTTC 60.340 57.143 10.75 0.00 37.07 2.17
137 138 1.630878 GATGGCCCGGATCCTATTTCT 59.369 52.381 10.75 0.00 0.00 2.52
138 139 1.056660 TGGCCCGGATCCTATTTCTC 58.943 55.000 10.75 0.00 0.00 2.87
139 140 0.325272 GGCCCGGATCCTATTTCTCC 59.675 60.000 10.75 0.00 0.00 3.71
142 143 3.516578 CGGATCCTATTTCTCCGCC 57.483 57.895 10.75 0.00 44.65 6.13
143 144 0.969894 CGGATCCTATTTCTCCGCCT 59.030 55.000 10.75 0.00 44.65 5.52
144 145 1.344763 CGGATCCTATTTCTCCGCCTT 59.655 52.381 10.75 0.00 44.65 4.35
145 146 2.610727 CGGATCCTATTTCTCCGCCTTC 60.611 54.545 10.75 0.00 44.65 3.46
146 147 2.610727 GGATCCTATTTCTCCGCCTTCG 60.611 54.545 3.84 0.00 0.00 3.79
147 148 1.481871 TCCTATTTCTCCGCCTTCGT 58.518 50.000 0.00 0.00 0.00 3.85
148 149 1.829222 TCCTATTTCTCCGCCTTCGTT 59.171 47.619 0.00 0.00 0.00 3.85
149 150 2.235402 TCCTATTTCTCCGCCTTCGTTT 59.765 45.455 0.00 0.00 0.00 3.60
150 151 3.007635 CCTATTTCTCCGCCTTCGTTTT 58.992 45.455 0.00 0.00 0.00 2.43
151 152 3.439129 CCTATTTCTCCGCCTTCGTTTTT 59.561 43.478 0.00 0.00 0.00 1.94
169 170 3.467374 TTTTCAAATGCCAAGTGGGAC 57.533 42.857 0.00 0.00 38.75 4.46
170 171 0.958091 TTCAAATGCCAAGTGGGACG 59.042 50.000 0.00 0.00 38.75 4.79
171 172 0.893270 TCAAATGCCAAGTGGGACGG 60.893 55.000 0.00 0.00 38.75 4.79
172 173 1.606313 AAATGCCAAGTGGGACGGG 60.606 57.895 0.00 0.00 38.75 5.28
173 174 2.075355 AAATGCCAAGTGGGACGGGA 62.075 55.000 0.00 0.00 38.75 5.14
174 175 2.764637 AATGCCAAGTGGGACGGGAC 62.765 60.000 0.00 0.00 38.75 4.46
175 176 3.948719 GCCAAGTGGGACGGGACA 61.949 66.667 0.00 0.00 40.01 4.02
176 177 2.347490 CCAAGTGGGACGGGACAG 59.653 66.667 0.00 0.00 40.01 3.51
177 178 2.214216 CCAAGTGGGACGGGACAGA 61.214 63.158 0.00 0.00 40.01 3.41
178 179 1.293498 CAAGTGGGACGGGACAGAG 59.707 63.158 0.00 0.00 0.00 3.35
179 180 1.155390 AAGTGGGACGGGACAGAGA 59.845 57.895 0.00 0.00 0.00 3.10
180 181 0.252284 AAGTGGGACGGGACAGAGAT 60.252 55.000 0.00 0.00 0.00 2.75
181 182 0.684805 AGTGGGACGGGACAGAGATC 60.685 60.000 0.00 0.00 0.00 2.75
182 183 0.970937 GTGGGACGGGACAGAGATCA 60.971 60.000 0.00 0.00 0.00 2.92
183 184 0.684479 TGGGACGGGACAGAGATCAG 60.684 60.000 0.00 0.00 0.00 2.90
184 185 1.395826 GGGACGGGACAGAGATCAGG 61.396 65.000 0.00 0.00 0.00 3.86
185 186 0.684805 GGACGGGACAGAGATCAGGT 60.685 60.000 0.00 0.00 0.00 4.00
186 187 0.457851 GACGGGACAGAGATCAGGTG 59.542 60.000 0.00 0.00 0.00 4.00
187 188 0.039764 ACGGGACAGAGATCAGGTGA 59.960 55.000 0.00 0.00 0.00 4.02
188 189 1.342474 ACGGGACAGAGATCAGGTGAT 60.342 52.381 0.00 0.00 37.51 3.06
189 190 1.068281 CGGGACAGAGATCAGGTGATG 59.932 57.143 0.00 0.00 34.37 3.07
190 191 1.202627 GGGACAGAGATCAGGTGATGC 60.203 57.143 0.00 0.00 34.37 3.91
191 192 1.483827 GGACAGAGATCAGGTGATGCA 59.516 52.381 0.00 0.00 34.37 3.96
192 193 2.548875 GACAGAGATCAGGTGATGCAC 58.451 52.381 0.00 0.00 34.37 4.57
193 194 1.134877 ACAGAGATCAGGTGATGCACG 60.135 52.381 0.00 0.00 34.83 5.34
194 195 1.134877 CAGAGATCAGGTGATGCACGT 60.135 52.381 0.00 0.00 34.83 4.49
195 196 1.552337 AGAGATCAGGTGATGCACGTT 59.448 47.619 0.00 0.00 34.83 3.99
196 197 2.027745 AGAGATCAGGTGATGCACGTTT 60.028 45.455 0.00 0.00 34.83 3.60
197 198 2.079158 AGATCAGGTGATGCACGTTTG 58.921 47.619 0.00 0.00 34.83 2.93
207 208 4.513275 CACGTTTGCATGTCACCG 57.487 55.556 0.00 1.34 0.00 4.94
208 209 1.646540 CACGTTTGCATGTCACCGT 59.353 52.632 0.00 1.94 34.15 4.83
209 210 0.657077 CACGTTTGCATGTCACCGTG 60.657 55.000 18.04 18.04 41.06 4.94
210 211 1.092921 ACGTTTGCATGTCACCGTGT 61.093 50.000 0.00 0.00 33.08 4.49
211 212 0.657077 CGTTTGCATGTCACCGTGTG 60.657 55.000 0.00 0.00 34.45 3.82
212 213 0.934436 GTTTGCATGTCACCGTGTGC 60.934 55.000 5.81 5.81 38.05 4.57
213 214 2.069465 TTTGCATGTCACCGTGTGCC 62.069 55.000 9.42 0.00 36.79 5.01
214 215 3.737172 GCATGTCACCGTGTGCCC 61.737 66.667 0.00 0.00 32.98 5.36
215 216 2.032528 CATGTCACCGTGTGCCCT 59.967 61.111 0.00 0.00 32.98 5.19
216 217 2.032528 ATGTCACCGTGTGCCCTG 59.967 61.111 0.00 0.00 32.98 4.45
217 218 4.927782 TGTCACCGTGTGCCCTGC 62.928 66.667 0.00 0.00 32.98 4.85
229 230 4.113815 CCCTGCGGCCTCCATTCA 62.114 66.667 0.00 0.00 0.00 2.57
230 231 2.045045 CCTGCGGCCTCCATTCAA 60.045 61.111 0.00 0.00 0.00 2.69
231 232 1.678635 CCTGCGGCCTCCATTCAAA 60.679 57.895 0.00 0.00 0.00 2.69
232 233 1.039233 CCTGCGGCCTCCATTCAAAT 61.039 55.000 0.00 0.00 0.00 2.32
233 234 0.819582 CTGCGGCCTCCATTCAAATT 59.180 50.000 0.00 0.00 0.00 1.82
234 235 1.205417 CTGCGGCCTCCATTCAAATTT 59.795 47.619 0.00 0.00 0.00 1.82
235 236 2.426738 CTGCGGCCTCCATTCAAATTTA 59.573 45.455 0.00 0.00 0.00 1.40
236 237 2.828520 TGCGGCCTCCATTCAAATTTAA 59.171 40.909 0.00 0.00 0.00 1.52
237 238 3.259374 TGCGGCCTCCATTCAAATTTAAA 59.741 39.130 0.00 0.00 0.00 1.52
238 239 3.616821 GCGGCCTCCATTCAAATTTAAAC 59.383 43.478 0.00 0.00 0.00 2.01
239 240 4.815269 CGGCCTCCATTCAAATTTAAACA 58.185 39.130 0.00 0.00 0.00 2.83
240 241 5.418676 CGGCCTCCATTCAAATTTAAACAT 58.581 37.500 0.00 0.00 0.00 2.71
241 242 5.874261 CGGCCTCCATTCAAATTTAAACATT 59.126 36.000 0.00 0.00 0.00 2.71
242 243 6.183360 CGGCCTCCATTCAAATTTAAACATTG 60.183 38.462 0.00 8.56 0.00 2.82
243 244 6.403527 GGCCTCCATTCAAATTTAAACATTGC 60.404 38.462 0.00 0.00 0.00 3.56
244 245 6.149142 GCCTCCATTCAAATTTAAACATTGCA 59.851 34.615 9.60 0.00 0.00 4.08
245 246 7.308469 GCCTCCATTCAAATTTAAACATTGCAA 60.308 33.333 0.00 0.00 0.00 4.08
246 247 8.566260 CCTCCATTCAAATTTAAACATTGCAAA 58.434 29.630 1.71 0.00 0.00 3.68
278 279 1.917273 AAATCATGCATGTTCGCAGC 58.083 45.000 25.43 0.00 46.99 5.25
279 280 0.812549 AATCATGCATGTTCGCAGCA 59.187 45.000 25.43 4.73 46.99 4.41
280 281 0.099968 ATCATGCATGTTCGCAGCAC 59.900 50.000 25.43 0.00 46.99 4.40
281 282 1.210672 CATGCATGTTCGCAGCACA 59.789 52.632 18.91 0.00 46.99 4.57
282 283 0.179148 CATGCATGTTCGCAGCACAT 60.179 50.000 18.91 0.00 46.99 3.21
283 284 1.064357 CATGCATGTTCGCAGCACATA 59.936 47.619 18.91 0.00 46.99 2.29
284 285 1.381522 TGCATGTTCGCAGCACATAT 58.618 45.000 0.00 0.00 36.86 1.78
285 286 1.744522 TGCATGTTCGCAGCACATATT 59.255 42.857 0.00 0.00 36.86 1.28
286 287 2.941720 TGCATGTTCGCAGCACATATTA 59.058 40.909 0.00 0.00 36.86 0.98
287 288 3.376546 TGCATGTTCGCAGCACATATTAA 59.623 39.130 0.00 0.00 36.86 1.40
288 289 3.970610 GCATGTTCGCAGCACATATTAAG 59.029 43.478 0.00 0.00 32.88 1.85
289 290 4.260743 GCATGTTCGCAGCACATATTAAGA 60.261 41.667 0.00 0.00 32.88 2.10
290 291 5.561532 GCATGTTCGCAGCACATATTAAGAT 60.562 40.000 0.00 0.00 32.88 2.40
291 292 6.347644 GCATGTTCGCAGCACATATTAAGATA 60.348 38.462 0.00 0.00 32.88 1.98
292 293 7.575365 CATGTTCGCAGCACATATTAAGATAA 58.425 34.615 0.00 0.00 32.88 1.75
293 294 6.943981 TGTTCGCAGCACATATTAAGATAAC 58.056 36.000 0.00 0.00 0.00 1.89
294 295 6.761242 TGTTCGCAGCACATATTAAGATAACT 59.239 34.615 0.00 0.00 0.00 2.24
295 296 7.042725 TGTTCGCAGCACATATTAAGATAACTC 60.043 37.037 0.00 0.00 0.00 3.01
296 297 5.926542 TCGCAGCACATATTAAGATAACTCC 59.073 40.000 0.00 0.00 0.00 3.85
297 298 5.928839 CGCAGCACATATTAAGATAACTCCT 59.071 40.000 0.00 0.00 0.00 3.69
298 299 7.039993 TCGCAGCACATATTAAGATAACTCCTA 60.040 37.037 0.00 0.00 0.00 2.94
299 300 7.598869 CGCAGCACATATTAAGATAACTCCTAA 59.401 37.037 0.00 0.00 0.00 2.69
300 301 9.273016 GCAGCACATATTAAGATAACTCCTAAA 57.727 33.333 0.00 0.00 0.00 1.85
346 347 9.884465 AAAAATACATCGAGAAACAAAGAAGAG 57.116 29.630 0.00 0.00 0.00 2.85
347 348 8.833231 AAATACATCGAGAAACAAAGAAGAGA 57.167 30.769 0.00 0.00 0.00 3.10
348 349 8.833231 AATACATCGAGAAACAAAGAAGAGAA 57.167 30.769 0.00 0.00 0.00 2.87
349 350 8.833231 ATACATCGAGAAACAAAGAAGAGAAA 57.167 30.769 0.00 0.00 0.00 2.52
350 351 6.949449 ACATCGAGAAACAAAGAAGAGAAAC 58.051 36.000 0.00 0.00 0.00 2.78
351 352 6.763610 ACATCGAGAAACAAAGAAGAGAAACT 59.236 34.615 0.00 0.00 0.00 2.66
352 353 6.830114 TCGAGAAACAAAGAAGAGAAACTC 57.170 37.500 0.00 0.00 0.00 3.01
353 354 6.338146 TCGAGAAACAAAGAAGAGAAACTCA 58.662 36.000 0.00 0.00 32.06 3.41
354 355 6.477033 TCGAGAAACAAAGAAGAGAAACTCAG 59.523 38.462 0.00 0.00 32.06 3.35
355 356 6.477033 CGAGAAACAAAGAAGAGAAACTCAGA 59.523 38.462 0.00 0.00 32.06 3.27
356 357 7.170658 CGAGAAACAAAGAAGAGAAACTCAGAT 59.829 37.037 0.00 0.00 32.06 2.90
357 358 8.152309 AGAAACAAAGAAGAGAAACTCAGATG 57.848 34.615 0.00 0.00 32.06 2.90
358 359 7.772757 AGAAACAAAGAAGAGAAACTCAGATGT 59.227 33.333 0.00 0.00 32.06 3.06
359 360 6.857777 ACAAAGAAGAGAAACTCAGATGTG 57.142 37.500 0.00 0.00 32.06 3.21
360 361 6.586344 ACAAAGAAGAGAAACTCAGATGTGA 58.414 36.000 0.00 0.00 32.06 3.58
361 362 7.050377 ACAAAGAAGAGAAACTCAGATGTGAA 58.950 34.615 0.00 0.00 32.06 3.18
362 363 7.011857 ACAAAGAAGAGAAACTCAGATGTGAAC 59.988 37.037 0.00 0.00 32.06 3.18
363 364 6.418057 AGAAGAGAAACTCAGATGTGAACT 57.582 37.500 0.00 0.00 32.06 3.01
364 365 6.222389 AGAAGAGAAACTCAGATGTGAACTG 58.778 40.000 0.00 0.00 36.80 3.16
365 366 5.543507 AGAGAAACTCAGATGTGAACTGT 57.456 39.130 0.00 0.00 36.81 3.55
373 374 0.673644 GATGTGAACTGTCGTGGGGG 60.674 60.000 0.00 0.00 0.00 5.40
384 385 2.370445 CGTGGGGGAGAAGCCAGAT 61.370 63.158 0.00 0.00 38.95 2.90
386 387 2.002977 TGGGGGAGAAGCCAGATGG 61.003 63.158 0.00 0.00 38.95 3.51
388 389 1.529309 GGGGAGAAGCCAGATGGTC 59.471 63.158 0.00 0.00 38.95 4.02
392 393 0.529555 GAGAAGCCAGATGGTCGAGC 60.530 60.000 7.89 7.89 37.57 5.03
405 406 3.991051 CGAGCAGTGACCGGTGGT 61.991 66.667 14.63 1.90 39.44 4.16
414 415 0.899720 TGACCGGTGGTGATTAGGAC 59.100 55.000 14.63 0.00 35.25 3.85
442 443 2.125472 TTCACGTGTGTGGTGCGT 60.125 55.556 16.51 0.00 46.42 5.24
475 476 2.476686 GCGTAAAAATACGGTTGCCTCC 60.477 50.000 10.03 0.00 43.08 4.30
479 480 1.024579 AAATACGGTTGCCTCCTGCG 61.025 55.000 0.00 0.00 45.60 5.18
480 481 2.180159 AATACGGTTGCCTCCTGCGT 62.180 55.000 0.00 0.00 45.60 5.24
481 482 2.852495 ATACGGTTGCCTCCTGCGTG 62.852 60.000 0.00 0.00 45.60 5.34
484 485 3.730761 GTTGCCTCCTGCGTGCAG 61.731 66.667 14.82 14.82 45.60 4.41
525 526 1.692519 ACAGTTACAGTGTCCTCCCAC 59.307 52.381 0.00 0.00 35.53 4.61
534 535 2.122413 TCCTCCCACAGTGCCACT 60.122 61.111 0.00 0.00 0.00 4.00
553 554 3.009115 TTTCCCCTGCCTCCTCCG 61.009 66.667 0.00 0.00 0.00 4.63
566 567 2.954868 CTCCGTGGCGACGTATGC 60.955 66.667 20.00 3.75 44.54 3.14
594 595 0.108377 GGCCTTGTAATTTTGGCGGG 60.108 55.000 0.00 0.00 45.75 6.13
655 656 0.875908 TGTGCGTGTGAAGAGTGAGC 60.876 55.000 0.00 0.00 0.00 4.26
679 680 0.730834 CAAGCGTCCTCTCGAGTGTG 60.731 60.000 13.13 4.61 0.00 3.82
684 685 0.523966 GTCCTCTCGAGTGTGGACTG 59.476 60.000 29.39 11.60 43.91 3.51
685 686 0.110678 TCCTCTCGAGTGTGGACTGT 59.889 55.000 13.13 0.00 30.16 3.55
687 688 0.167033 CTCTCGAGTGTGGACTGTCG 59.833 60.000 13.13 0.00 30.16 4.35
688 689 0.250166 TCTCGAGTGTGGACTGTCGA 60.250 55.000 13.13 0.00 30.16 4.20
689 690 0.110147 CTCGAGTGTGGACTGTCGAC 60.110 60.000 14.99 14.99 30.16 4.20
690 691 0.534427 TCGAGTGTGGACTGTCGACT 60.534 55.000 20.95 13.28 30.16 4.18
691 692 0.110147 CGAGTGTGGACTGTCGACTC 60.110 60.000 20.95 17.68 30.16 3.36
692 693 0.110147 GAGTGTGGACTGTCGACTCG 60.110 60.000 20.95 10.33 30.16 4.18
693 694 1.729838 GTGTGGACTGTCGACTCGC 60.730 63.158 20.95 10.55 0.00 5.03
694 695 1.897137 TGTGGACTGTCGACTCGCT 60.897 57.895 20.95 0.00 0.00 4.93
695 696 1.154188 GTGGACTGTCGACTCGCTC 60.154 63.158 17.92 5.56 0.00 5.03
696 697 1.599797 TGGACTGTCGACTCGCTCA 60.600 57.895 17.92 6.14 0.00 4.26
729 749 1.227292 GAATCGCCCGAGGGTCTTC 60.227 63.158 10.26 6.85 37.65 2.87
746 766 3.442977 GTCTTCGGAGCAAGTAGGAACTA 59.557 47.826 0.00 0.00 41.75 2.24
747 767 4.082354 GTCTTCGGAGCAAGTAGGAACTAA 60.082 45.833 0.00 0.00 45.48 2.24
748 768 4.710375 TCTTCGGAGCAAGTAGGAACTAAT 59.290 41.667 0.00 0.00 45.48 1.73
764 786 2.301870 ACTAATTTGTCCTCTGCGTCCA 59.698 45.455 0.00 0.00 0.00 4.02
811 839 3.816920 CGCTCGTCGCACTTGTCG 61.817 66.667 0.00 0.00 39.08 4.35
824 852 2.142357 CTTGTCGTCCTCGTCCTGCA 62.142 60.000 0.00 0.00 38.33 4.41
930 966 4.436242 GCATAGCGCATCCTACTACTAA 57.564 45.455 11.47 0.00 41.79 2.24
936 981 6.015027 AGCGCATCCTACTACTAATACTTG 57.985 41.667 11.47 0.00 0.00 3.16
974 1035 0.951040 CGCGCCAAGAAGAAGAAGGT 60.951 55.000 0.00 0.00 0.00 3.50
975 1036 0.799393 GCGCCAAGAAGAAGAAGGTC 59.201 55.000 0.00 0.00 0.00 3.85
976 1037 1.071605 CGCCAAGAAGAAGAAGGTCG 58.928 55.000 0.00 0.00 0.00 4.79
977 1038 1.336887 CGCCAAGAAGAAGAAGGTCGA 60.337 52.381 0.00 0.00 0.00 4.20
978 1039 2.767505 GCCAAGAAGAAGAAGGTCGAA 58.232 47.619 0.00 0.00 0.00 3.71
979 1040 2.480802 GCCAAGAAGAAGAAGGTCGAAC 59.519 50.000 0.00 0.00 0.00 3.95
980 1041 2.731976 CCAAGAAGAAGAAGGTCGAACG 59.268 50.000 0.00 0.00 0.00 3.95
1007 1068 2.107953 GGAGAGAGCCATGTCCGC 59.892 66.667 0.00 0.00 0.00 5.54
1254 1318 3.394836 GCCCGGTTCCTCTGCTCT 61.395 66.667 0.00 0.00 0.00 4.09
1284 1348 4.074526 GAGGAGCAGCAGCACGGA 62.075 66.667 3.17 0.00 45.49 4.69
1297 1361 3.673597 ACGGAGAGGGGGAGCTGA 61.674 66.667 0.00 0.00 0.00 4.26
1298 1362 3.151022 CGGAGAGGGGGAGCTGAC 61.151 72.222 0.00 0.00 0.00 3.51
1300 1364 3.151022 GAGAGGGGGAGCTGACGG 61.151 72.222 0.00 0.00 0.00 4.79
1371 1435 2.203308 CCCTCGGTAGGCGAGCTA 60.203 66.667 0.00 0.00 42.14 3.32
1386 1450 3.288290 CTAGCGGCGATCCTCGGT 61.288 66.667 12.98 10.94 40.84 4.69
1390 1454 3.518998 CGGCGATCCTCGGTGTCT 61.519 66.667 0.00 0.00 40.84 3.41
1393 1457 1.227002 GCGATCCTCGGTGTCTTCC 60.227 63.158 0.00 0.00 40.84 3.46
1508 1572 2.040043 CCTCCAGCCCCTCCTCAT 60.040 66.667 0.00 0.00 0.00 2.90
1546 1616 3.368571 GCTGACTTGCTGGCACCC 61.369 66.667 0.00 0.00 0.00 4.61
1547 1617 2.433446 CTGACTTGCTGGCACCCT 59.567 61.111 0.00 0.00 0.00 4.34
1548 1618 1.679311 CTGACTTGCTGGCACCCTA 59.321 57.895 0.00 0.00 0.00 3.53
1549 1619 0.392193 CTGACTTGCTGGCACCCTAG 60.392 60.000 0.00 0.00 0.00 3.02
1550 1620 1.746991 GACTTGCTGGCACCCTAGC 60.747 63.158 0.00 0.00 40.29 3.42
1553 1623 4.415150 TGCTGGCACCCTAGCAGC 62.415 66.667 11.16 11.16 44.36 5.25
1554 1624 4.415150 GCTGGCACCCTAGCAGCA 62.415 66.667 12.69 0.00 39.67 4.41
1555 1625 2.124819 CTGGCACCCTAGCAGCAG 60.125 66.667 0.00 0.00 35.83 4.24
1556 1626 4.415150 TGGCACCCTAGCAGCAGC 62.415 66.667 0.00 0.00 42.56 5.25
1557 1627 4.415150 GGCACCCTAGCAGCAGCA 62.415 66.667 3.17 0.00 45.49 4.41
1558 1628 2.360350 GCACCCTAGCAGCAGCAA 60.360 61.111 3.17 0.00 45.49 3.91
1559 1629 1.973281 GCACCCTAGCAGCAGCAAA 60.973 57.895 3.17 0.00 45.49 3.68
1560 1630 1.878775 CACCCTAGCAGCAGCAAAC 59.121 57.895 3.17 0.00 45.49 2.93
1561 1631 0.890542 CACCCTAGCAGCAGCAAACA 60.891 55.000 3.17 0.00 45.49 2.83
1565 1635 2.636830 CCTAGCAGCAGCAAACAGTAT 58.363 47.619 3.17 0.00 45.49 2.12
1568 1638 1.808945 AGCAGCAGCAAACAGTATCAC 59.191 47.619 3.17 0.00 45.49 3.06
1573 1643 2.068519 CAGCAAACAGTATCACGCAGA 58.931 47.619 0.00 0.00 0.00 4.26
1595 1665 1.841663 CTGTTCACCGTCCGGCAAAG 61.842 60.000 5.47 0.00 39.32 2.77
1602 1672 1.724581 CGTCCGGCAAAGCGAAAAC 60.725 57.895 0.00 0.00 0.00 2.43
1607 1677 0.386731 CGGCAAAGCGAAAACGGAAT 60.387 50.000 0.00 0.00 0.00 3.01
1614 1684 3.741805 AGCGAAAACGGAATAGAAAGC 57.258 42.857 0.00 0.00 0.00 3.51
1615 1685 3.071479 AGCGAAAACGGAATAGAAAGCA 58.929 40.909 0.00 0.00 0.00 3.91
1628 1698 2.693069 AGAAAGCACGTTCTCTGATGG 58.307 47.619 0.00 0.00 32.16 3.51
1634 1704 3.251004 AGCACGTTCTCTGATGGTTTTTC 59.749 43.478 0.00 0.00 0.00 2.29
1635 1705 3.609409 GCACGTTCTCTGATGGTTTTTCC 60.609 47.826 0.00 0.00 0.00 3.13
1656 1726 3.207265 ACATATGGTGTGTGTGTGTGT 57.793 42.857 7.80 0.00 40.28 3.72
1657 1727 2.877786 ACATATGGTGTGTGTGTGTGTG 59.122 45.455 7.80 0.00 40.28 3.82
1753 1823 3.470888 GGAGGAGGCGGCAGCTTA 61.471 66.667 13.08 0.00 44.37 3.09
1754 1824 2.812619 GGAGGAGGCGGCAGCTTAT 61.813 63.158 13.08 0.00 44.37 1.73
1755 1825 1.596477 GAGGAGGCGGCAGCTTATG 60.596 63.158 13.08 0.00 44.37 1.90
1756 1826 2.190578 GGAGGCGGCAGCTTATGT 59.809 61.111 13.08 0.00 44.37 2.29
1757 1827 1.889573 GGAGGCGGCAGCTTATGTC 60.890 63.158 13.08 0.00 44.37 3.06
1763 1833 2.979130 GGCAGCTTATGTCGAGGAC 58.021 57.895 0.00 0.00 0.00 3.85
1764 1834 0.530870 GGCAGCTTATGTCGAGGACC 60.531 60.000 0.00 0.00 0.00 4.46
1765 1835 0.530870 GCAGCTTATGTCGAGGACCC 60.531 60.000 0.00 0.00 0.00 4.46
1766 1836 0.249073 CAGCTTATGTCGAGGACCCG 60.249 60.000 0.00 0.00 0.00 5.28
1795 1865 1.449246 GCGTTGATCAGCTGCCTCT 60.449 57.895 9.47 0.00 0.00 3.69
1813 1886 4.565236 GCCTCTATGGGGATCTTCAGATTG 60.565 50.000 0.00 0.00 33.57 2.67
1842 1915 2.668632 GGCACGGTGATCTTGGGA 59.331 61.111 13.29 0.00 0.00 4.37
1846 1919 0.108138 CACGGTGATCTTGGGACTCC 60.108 60.000 0.74 0.00 0.00 3.85
1852 1925 1.127343 GATCTTGGGACTCCTGGAGG 58.873 60.000 26.56 8.69 33.35 4.30
1892 1965 1.586422 CAATCCTGCATGTACCTCCG 58.414 55.000 0.00 0.00 0.00 4.63
1894 1967 2.082140 ATCCTGCATGTACCTCCGTA 57.918 50.000 0.00 0.00 0.00 4.02
1902 1975 3.717707 CATGTACCTCCGTATCAGGTTG 58.282 50.000 0.00 0.00 41.95 3.77
1910 1983 3.443052 TCCGTATCAGGTTGGGAACTTA 58.557 45.455 0.00 0.00 0.00 2.24
1911 1984 3.839490 TCCGTATCAGGTTGGGAACTTAA 59.161 43.478 0.00 0.00 0.00 1.85
1942 2016 8.902040 ATTGAATTTTTACGCTGAATTCTCTC 57.098 30.769 7.05 0.00 39.39 3.20
1943 2017 7.672983 TGAATTTTTACGCTGAATTCTCTCT 57.327 32.000 7.05 0.00 39.39 3.10
1944 2018 8.099364 TGAATTTTTACGCTGAATTCTCTCTT 57.901 30.769 7.05 0.00 39.39 2.85
1945 2019 8.017373 TGAATTTTTACGCTGAATTCTCTCTTG 58.983 33.333 7.05 0.00 39.39 3.02
1946 2020 4.928661 TTTACGCTGAATTCTCTCTTGC 57.071 40.909 7.05 1.38 0.00 4.01
1947 2021 2.758736 ACGCTGAATTCTCTCTTGCT 57.241 45.000 7.05 0.00 0.00 3.91
1948 2022 2.344950 ACGCTGAATTCTCTCTTGCTG 58.655 47.619 7.05 2.27 0.00 4.41
1949 2023 2.028658 ACGCTGAATTCTCTCTTGCTGA 60.029 45.455 7.05 0.00 0.00 4.26
1950 2024 2.348059 CGCTGAATTCTCTCTTGCTGAC 59.652 50.000 7.05 0.00 0.00 3.51
1951 2025 3.598299 GCTGAATTCTCTCTTGCTGACT 58.402 45.455 7.05 0.00 0.00 3.41
1952 2026 4.676459 CGCTGAATTCTCTCTTGCTGACTA 60.676 45.833 7.05 0.00 0.00 2.59
1954 2028 5.463061 GCTGAATTCTCTCTTGCTGACTATC 59.537 44.000 7.05 0.00 0.00 2.08
1955 2029 6.535963 TGAATTCTCTCTTGCTGACTATCA 57.464 37.500 7.05 0.00 0.00 2.15
1956 2030 7.122138 TGAATTCTCTCTTGCTGACTATCAT 57.878 36.000 7.05 0.00 0.00 2.45
1957 2031 8.242729 TGAATTCTCTCTTGCTGACTATCATA 57.757 34.615 7.05 0.00 0.00 2.15
1958 2032 8.140628 TGAATTCTCTCTTGCTGACTATCATAC 58.859 37.037 7.05 0.00 0.00 2.39
1959 2033 5.681337 TCTCTCTTGCTGACTATCATACG 57.319 43.478 0.00 0.00 0.00 3.06
1960 2034 5.126779 TCTCTCTTGCTGACTATCATACGT 58.873 41.667 0.00 0.00 0.00 3.57
1961 2035 5.008118 TCTCTCTTGCTGACTATCATACGTG 59.992 44.000 0.00 0.00 0.00 4.49
1962 2036 3.706698 TCTTGCTGACTATCATACGTGC 58.293 45.455 0.00 0.00 0.00 5.34
1964 2038 3.084070 TGCTGACTATCATACGTGCTG 57.916 47.619 0.00 0.00 0.00 4.41
1965 2039 2.427095 TGCTGACTATCATACGTGCTGT 59.573 45.455 0.00 0.00 0.00 4.40
1966 2040 2.791560 GCTGACTATCATACGTGCTGTG 59.208 50.000 0.00 0.00 0.00 3.66
1969 2043 4.421058 TGACTATCATACGTGCTGTGTTC 58.579 43.478 0.00 0.00 0.00 3.18
1970 2044 3.435566 ACTATCATACGTGCTGTGTTCG 58.564 45.455 0.00 0.00 0.00 3.95
1972 2046 2.143008 TCATACGTGCTGTGTTCGTT 57.857 45.000 0.00 0.00 38.69 3.85
1973 2047 1.790043 TCATACGTGCTGTGTTCGTTG 59.210 47.619 0.00 0.00 38.69 4.10
1974 2048 1.136363 CATACGTGCTGTGTTCGTTGG 60.136 52.381 0.00 0.00 38.69 3.77
1977 2051 1.279840 GTGCTGTGTTCGTTGGAGC 59.720 57.895 0.00 0.00 0.00 4.70
1984 2059 1.654105 GTGTTCGTTGGAGCACTATCG 59.346 52.381 4.17 0.00 46.97 2.92
1985 2060 1.542472 TGTTCGTTGGAGCACTATCGA 59.458 47.619 0.00 0.00 0.00 3.59
1988 2063 2.809446 TCGTTGGAGCACTATCGAATG 58.191 47.619 0.00 0.00 0.00 2.67
1989 2064 1.258982 CGTTGGAGCACTATCGAATGC 59.741 52.381 10.73 10.73 42.39 3.56
1993 2068 2.158914 TGGAGCACTATCGAATGCACAT 60.159 45.455 18.40 2.05 44.59 3.21
1994 2069 2.222678 GGAGCACTATCGAATGCACATG 59.777 50.000 18.40 0.00 44.59 3.21
2011 2086 5.444586 CACATGATGCAGTAAAAATGTGC 57.555 39.130 0.00 0.00 38.68 4.57
2017 2092 2.550180 TGCAGTAAAAATGTGCGCAGTA 59.450 40.909 12.22 2.74 40.23 2.74
2019 2094 4.393371 TGCAGTAAAAATGTGCGCAGTATA 59.607 37.500 12.22 0.00 40.23 1.47
2020 2095 5.065859 TGCAGTAAAAATGTGCGCAGTATAT 59.934 36.000 12.22 0.00 40.23 0.86
2024 2464 8.495148 CAGTAAAAATGTGCGCAGTATATATGA 58.505 33.333 12.22 0.00 0.00 2.15
2025 2465 8.712363 AGTAAAAATGTGCGCAGTATATATGAG 58.288 33.333 12.22 0.00 0.00 2.90
2036 2476 5.757320 GCAGTATATATGAGCAGGGCATTAG 59.243 44.000 0.00 0.00 0.00 1.73
2041 2481 7.739995 ATATATGAGCAGGGCATTAGTAGAA 57.260 36.000 0.00 0.00 0.00 2.10
2047 2487 6.015350 TGAGCAGGGCATTAGTAGAATAGTAC 60.015 42.308 0.00 0.00 0.00 2.73
2050 2490 6.209788 GCAGGGCATTAGTAGAATAGTACTCT 59.790 42.308 0.00 0.00 34.91 3.24
2051 2491 7.576098 GCAGGGCATTAGTAGAATAGTACTCTC 60.576 44.444 0.00 0.00 34.91 3.20
2052 2492 7.668052 CAGGGCATTAGTAGAATAGTACTCTCT 59.332 40.741 0.00 5.63 34.91 3.10
2053 2493 7.886446 AGGGCATTAGTAGAATAGTACTCTCTC 59.114 40.741 10.00 1.53 34.91 3.20
2054 2494 7.886446 GGGCATTAGTAGAATAGTACTCTCTCT 59.114 40.741 10.00 8.18 34.91 3.10
2055 2495 8.726988 GGCATTAGTAGAATAGTACTCTCTCTG 58.273 40.741 10.00 4.75 34.91 3.35
2056 2496 9.280174 GCATTAGTAGAATAGTACTCTCTCTGT 57.720 37.037 10.00 2.32 34.91 3.41
2091 2531 6.197364 AGAGTGTTTAGATCACTACGAAGG 57.803 41.667 0.00 0.00 44.68 3.46
2092 2532 5.944599 AGAGTGTTTAGATCACTACGAAGGA 59.055 40.000 0.00 0.00 44.68 3.36
2093 2533 6.433404 AGAGTGTTTAGATCACTACGAAGGAA 59.567 38.462 0.00 0.00 44.68 3.36
2094 2534 6.622549 AGTGTTTAGATCACTACGAAGGAAG 58.377 40.000 0.00 0.00 43.17 3.46
2095 2535 6.208994 AGTGTTTAGATCACTACGAAGGAAGT 59.791 38.462 0.00 0.00 43.17 3.01
2096 2536 7.392673 AGTGTTTAGATCACTACGAAGGAAGTA 59.607 37.037 0.00 0.00 43.17 2.24
2097 2537 7.484324 GTGTTTAGATCACTACGAAGGAAGTAC 59.516 40.741 0.00 0.00 33.59 2.73
2098 2538 7.392673 TGTTTAGATCACTACGAAGGAAGTACT 59.607 37.037 0.00 0.00 0.00 2.73
2099 2539 8.887717 GTTTAGATCACTACGAAGGAAGTACTA 58.112 37.037 0.00 0.00 0.00 1.82
2100 2540 9.624373 TTTAGATCACTACGAAGGAAGTACTAT 57.376 33.333 0.00 0.00 0.00 2.12
2101 2541 9.624373 TTAGATCACTACGAAGGAAGTACTATT 57.376 33.333 0.00 0.00 0.00 1.73
2102 2542 8.522542 AGATCACTACGAAGGAAGTACTATTT 57.477 34.615 0.00 0.00 0.00 1.40
2103 2543 8.968969 AGATCACTACGAAGGAAGTACTATTTT 58.031 33.333 0.00 0.00 0.00 1.82
2104 2544 9.583765 GATCACTACGAAGGAAGTACTATTTTT 57.416 33.333 0.00 0.00 0.00 1.94
2123 2563 4.301072 TTTTGCAGGGCATTAGTAGAGT 57.699 40.909 0.00 0.00 38.76 3.24
2124 2564 5.429681 TTTTGCAGGGCATTAGTAGAGTA 57.570 39.130 0.00 0.00 38.76 2.59
2125 2565 4.402056 TTGCAGGGCATTAGTAGAGTAC 57.598 45.455 0.00 0.00 38.76 2.73
2126 2566 3.643237 TGCAGGGCATTAGTAGAGTACT 58.357 45.455 0.00 0.00 36.85 2.73
2127 2567 4.800023 TGCAGGGCATTAGTAGAGTACTA 58.200 43.478 0.00 0.00 35.34 1.82
2128 2568 4.827835 TGCAGGGCATTAGTAGAGTACTAG 59.172 45.833 0.00 0.00 36.77 2.57
2129 2569 4.828387 GCAGGGCATTAGTAGAGTACTAGT 59.172 45.833 0.00 0.00 41.84 2.57
2130 2570 5.278561 GCAGGGCATTAGTAGAGTACTAGTG 60.279 48.000 5.39 10.66 45.99 2.74
2136 2576 6.505272 CATTAGTAGAGTACTAGTGCAACCC 58.495 44.000 13.75 0.00 40.50 4.11
2137 2577 4.319037 AGTAGAGTACTAGTGCAACCCT 57.681 45.455 13.75 7.00 37.80 4.34
2143 2583 0.034896 ACTAGTGCAACCCTCCAACG 59.965 55.000 0.00 0.00 37.80 4.10
2171 2611 2.229784 CTCCATTTCTGTCCAAGTTGCC 59.770 50.000 0.00 0.00 0.00 4.52
2176 2616 1.227823 CTGTCCAAGTTGCCGACCA 60.228 57.895 9.06 0.00 0.00 4.02
2177 2617 1.507141 CTGTCCAAGTTGCCGACCAC 61.507 60.000 9.06 0.00 0.00 4.16
2179 2619 1.098712 GTCCAAGTTGCCGACCACAA 61.099 55.000 0.00 0.00 0.00 3.33
2182 2622 1.101049 CAAGTTGCCGACCACAACCT 61.101 55.000 3.18 0.00 46.85 3.50
2184 2624 0.395173 AGTTGCCGACCACAACCTTT 60.395 50.000 3.18 0.00 46.85 3.11
2196 2636 5.880901 ACCACAACCTTTCATCTAGTGAAT 58.119 37.500 8.08 0.00 45.77 2.57
2207 2647 6.721571 TCATCTAGTGAATGAAAACGTTCC 57.278 37.500 0.00 0.00 32.78 3.62
2253 2693 2.543012 GGCATCAGATCGACAATGACAG 59.457 50.000 0.00 0.00 0.00 3.51
2267 2707 4.404073 ACAATGACAGGAGTAGCTAAGGAG 59.596 45.833 0.00 0.00 0.00 3.69
2271 2711 3.824443 GACAGGAGTAGCTAAGGAGGATC 59.176 52.174 0.00 0.00 0.00 3.36
2329 2786 7.385267 AGTGTCTTAGAGCCATCATTATGATC 58.615 38.462 4.51 0.00 34.28 2.92
2333 2790 7.333921 GTCTTAGAGCCATCATTATGATCTTGG 59.666 40.741 4.51 6.83 34.28 3.61
2334 2791 4.333690 AGAGCCATCATTATGATCTTGGC 58.666 43.478 23.39 23.39 41.27 4.52
2348 2820 9.797642 TTATGATCTTGGCATATTTGATAGTGT 57.202 29.630 0.00 0.00 0.00 3.55
2378 2853 4.694339 AGGATCTTAATTTCTTCGGTCCG 58.306 43.478 4.39 4.39 0.00 4.79
2382 2857 2.018542 TAATTTCTTCGGTCCGCCAG 57.981 50.000 6.34 5.14 34.09 4.85
2394 2869 1.077068 CCGCCAGCCAAAATCCCTA 60.077 57.895 0.00 0.00 0.00 3.53
2410 2885 4.487714 TCCCTATCAGTACAAAGCCAAG 57.512 45.455 0.00 0.00 0.00 3.61
2417 2892 2.226437 CAGTACAAAGCCAAGAATGCGT 59.774 45.455 0.00 0.00 0.00 5.24
2427 2902 0.593128 AAGAATGCGTGACAACCAGC 59.407 50.000 0.00 0.00 0.00 4.85
2453 3029 3.057386 TGTTTCAGTACCATGCATTGCAG 60.057 43.478 17.52 6.91 43.65 4.41
2462 3038 2.492881 CCATGCATTGCAGGTTTCAGTA 59.507 45.455 20.56 0.00 43.65 2.74
2476 3052 5.054477 GGTTTCAGTACAGCAACAGTAGAA 58.946 41.667 3.49 0.00 0.00 2.10
2477 3053 5.526111 GGTTTCAGTACAGCAACAGTAGAAA 59.474 40.000 3.49 0.00 0.00 2.52
2478 3054 6.037830 GGTTTCAGTACAGCAACAGTAGAAAA 59.962 38.462 3.49 0.00 0.00 2.29
2487 3092 4.584325 AGCAACAGTAGAAAATTTGCCAGA 59.416 37.500 0.00 0.00 42.91 3.86
2491 3096 7.592938 CAACAGTAGAAAATTTGCCAGACATA 58.407 34.615 0.00 0.00 0.00 2.29
2496 3101 9.193806 AGTAGAAAATTTGCCAGACATATGAAT 57.806 29.630 10.38 0.00 0.00 2.57
2497 3102 9.241317 GTAGAAAATTTGCCAGACATATGAATG 57.759 33.333 10.38 7.29 39.17 2.67
2499 3104 8.970020 AGAAAATTTGCCAGACATATGAATGTA 58.030 29.630 10.38 0.00 46.49 2.29
2532 3141 2.005451 CTGGTCTTATCACACAGCAGC 58.995 52.381 0.00 0.00 0.00 5.25
2534 3143 2.005451 GGTCTTATCACACAGCAGCAG 58.995 52.381 0.00 0.00 0.00 4.24
2535 3144 1.396301 GTCTTATCACACAGCAGCAGC 59.604 52.381 0.00 0.00 42.56 5.25
2649 3258 4.631740 TGTCGGAGGTCTGCCCCA 62.632 66.667 0.00 0.00 34.57 4.96
2714 3326 4.129737 CACGATCACCCGTCGCCT 62.130 66.667 0.00 0.00 42.56 5.52
2804 3416 1.028868 GCTACGACGTGGTCTACCCT 61.029 60.000 11.56 0.00 34.29 4.34
2840 3452 0.885879 TCTCGCGCTACAAGGAGAAA 59.114 50.000 5.56 0.00 32.92 2.52
2874 3486 8.499403 CAGGATGTACGAGAGATATAATCAGA 57.501 38.462 0.00 0.00 0.00 3.27
2875 3487 8.611757 CAGGATGTACGAGAGATATAATCAGAG 58.388 40.741 0.00 0.00 0.00 3.35
2876 3488 7.773224 AGGATGTACGAGAGATATAATCAGAGG 59.227 40.741 0.00 0.00 0.00 3.69
2877 3489 6.745159 TGTACGAGAGATATAATCAGAGGC 57.255 41.667 0.00 0.00 0.00 4.70
2878 3490 5.648526 TGTACGAGAGATATAATCAGAGGCC 59.351 44.000 0.00 0.00 0.00 5.19
2879 3491 4.667573 ACGAGAGATATAATCAGAGGCCA 58.332 43.478 5.01 0.00 0.00 5.36
2881 3493 5.719085 ACGAGAGATATAATCAGAGGCCAAT 59.281 40.000 5.01 0.00 0.00 3.16
2882 3494 6.892456 ACGAGAGATATAATCAGAGGCCAATA 59.108 38.462 5.01 0.00 0.00 1.90
2883 3495 7.563188 ACGAGAGATATAATCAGAGGCCAATAT 59.437 37.037 5.01 0.00 0.00 1.28
2888 3500 8.811017 AGATATAATCAGAGGCCAATATATCCG 58.189 37.037 5.01 0.00 35.10 4.18
2929 3544 2.807045 CTCGTCGTGCTGACTGCC 60.807 66.667 1.50 0.00 45.87 4.85
2934 3553 4.988598 CGTGCTGACTGCCGGGTT 62.989 66.667 2.18 0.00 42.00 4.11
2942 3561 0.958822 GACTGCCGGGTTTGATTTGT 59.041 50.000 2.18 0.00 0.00 2.83
3033 3652 2.433318 GCTTCGCCAAGTCGAGCT 60.433 61.111 0.00 0.00 39.82 4.09
3036 3655 1.142778 CTTCGCCAAGTCGAGCTAGC 61.143 60.000 6.62 6.62 39.82 3.42
3037 3656 1.595993 TTCGCCAAGTCGAGCTAGCT 61.596 55.000 19.45 19.45 39.82 3.32
3038 3657 0.746923 TCGCCAAGTCGAGCTAGCTA 60.747 55.000 19.38 0.00 34.09 3.32
3039 3658 0.317436 CGCCAAGTCGAGCTAGCTAG 60.317 60.000 19.38 18.55 0.00 3.42
3065 3684 2.787915 GAGGACCGACGACGTACC 59.212 66.667 0.00 8.93 37.88 3.34
3066 3685 2.747855 AGGACCGACGACGTACCC 60.748 66.667 0.00 4.35 37.88 3.69
3067 3686 2.747855 GGACCGACGACGTACCCT 60.748 66.667 0.00 0.00 37.88 4.34
3085 3704 0.969894 CTTCTTGGTCTCCGTGGACT 59.030 55.000 5.28 0.00 36.55 3.85
3086 3705 0.679505 TTCTTGGTCTCCGTGGACTG 59.320 55.000 5.28 0.00 36.55 3.51
3108 3727 0.239347 CGACGACGTTTCTGTACCCT 59.761 55.000 0.13 0.00 34.56 4.34
3109 3728 1.464608 CGACGACGTTTCTGTACCCTA 59.535 52.381 0.13 0.00 34.56 3.53
3110 3729 2.726066 CGACGACGTTTCTGTACCCTAC 60.726 54.545 0.13 0.00 34.56 3.18
3111 3730 1.197721 ACGACGTTTCTGTACCCTACG 59.802 52.381 0.00 0.00 38.14 3.51
3112 3731 1.464608 CGACGTTTCTGTACCCTACGA 59.535 52.381 11.99 0.00 36.21 3.43
3113 3732 2.475187 CGACGTTTCTGTACCCTACGAG 60.475 54.545 11.99 4.40 36.21 4.18
3154 3773 2.905880 CTAGGGGACGGCGTCGAT 60.906 66.667 31.02 21.56 40.11 3.59
3155 3774 3.195591 CTAGGGGACGGCGTCGATG 62.196 68.421 31.02 16.25 40.11 3.84
3162 3781 3.842126 CGGCGTCGATGCTGTGTG 61.842 66.667 27.01 10.32 39.00 3.82
3163 3782 2.432456 GGCGTCGATGCTGTGTGA 60.432 61.111 27.56 0.00 34.52 3.58
3164 3783 2.730672 GGCGTCGATGCTGTGTGAC 61.731 63.158 27.56 6.79 34.52 3.67
3165 3784 1.734477 GCGTCGATGCTGTGTGACT 60.734 57.895 22.31 0.00 0.00 3.41
3166 3785 1.949015 GCGTCGATGCTGTGTGACTG 61.949 60.000 22.31 0.00 0.00 3.51
3167 3786 0.664466 CGTCGATGCTGTGTGACTGT 60.664 55.000 0.00 0.00 0.00 3.55
3168 3787 1.401018 CGTCGATGCTGTGTGACTGTA 60.401 52.381 0.00 0.00 0.00 2.74
3169 3788 1.986378 GTCGATGCTGTGTGACTGTAC 59.014 52.381 0.00 0.00 0.00 2.90
3549 4981 1.342174 GTTACCCACGAAGTCACCAGA 59.658 52.381 0.00 0.00 41.61 3.86
3550 4982 0.963962 TACCCACGAAGTCACCAGAC 59.036 55.000 0.00 0.00 41.61 3.51
3558 4990 2.430921 GTCACCAGACGTGCCTCG 60.431 66.667 0.00 0.00 42.69 4.63
3587 5019 1.756430 GGAATTTCTCCTCCCACTGC 58.244 55.000 0.00 0.00 41.61 4.40
3589 5021 2.357569 GGAATTTCTCCTCCCACTGCAT 60.358 50.000 0.00 0.00 41.61 3.96
3596 5028 1.065199 TCCTCCCACTGCATGAACATC 60.065 52.381 0.00 0.00 0.00 3.06
3598 5030 0.392863 TCCCACTGCATGAACATCGG 60.393 55.000 0.00 0.00 0.00 4.18
3601 5033 0.179181 CACTGCATGAACATCGGCAC 60.179 55.000 0.00 0.00 32.06 5.01
3607 5039 2.159338 GCATGAACATCGGCACAAAGAT 60.159 45.455 0.00 0.00 0.00 2.40
3609 5041 3.557577 TGAACATCGGCACAAAGATTG 57.442 42.857 0.00 0.00 0.00 2.67
3610 5042 2.884012 TGAACATCGGCACAAAGATTGT 59.116 40.909 0.00 0.00 46.75 2.71
3618 5050 8.250332 ACATCGGCACAAAGATTGTAATAAATT 58.750 29.630 0.00 0.00 43.23 1.82
3646 5079 2.959357 GCGAGCACTGTGCCAAGTC 61.959 63.158 27.74 17.67 46.52 3.01
3650 5083 1.273606 GAGCACTGTGCCAAGTCTAGA 59.726 52.381 27.74 0.00 46.52 2.43
3696 5129 3.506067 CCACCACAAGAAACCTAACCATC 59.494 47.826 0.00 0.00 0.00 3.51
3773 5208 4.085107 GCGCAAAAGTAACCAGATTGTTTG 60.085 41.667 0.30 0.00 0.00 2.93
3777 5212 7.398746 GCAAAAGTAACCAGATTGTTTGAAAC 58.601 34.615 0.14 0.14 0.00 2.78
3845 5295 1.574339 CTAAGGTAGAGTGGGGAGGGA 59.426 57.143 0.00 0.00 0.00 4.20
3849 5299 0.264955 GTAGAGTGGGGAGGGATGGA 59.735 60.000 0.00 0.00 0.00 3.41
3856 5306 1.152649 GGGGAGGGATGGATGTTCAT 58.847 55.000 0.00 0.00 0.00 2.57
3863 5313 2.042162 GGGATGGATGTTCATATGGGCT 59.958 50.000 2.13 0.00 0.00 5.19
3871 5321 6.272090 TGGATGTTCATATGGGCTACATAGAA 59.728 38.462 2.13 7.99 44.79 2.10
3884 5335 2.423577 ACATAGAACTTGTTGGGTCGC 58.576 47.619 0.00 0.00 0.00 5.19
3943 5394 4.168101 ACCCAAAATAGAGAGGTCAGTCA 58.832 43.478 0.00 0.00 0.00 3.41
3944 5395 4.597507 ACCCAAAATAGAGAGGTCAGTCAA 59.402 41.667 0.00 0.00 0.00 3.18
3945 5396 5.073144 ACCCAAAATAGAGAGGTCAGTCAAA 59.927 40.000 0.00 0.00 0.00 2.69
3946 5397 6.003950 CCCAAAATAGAGAGGTCAGTCAAAA 58.996 40.000 0.00 0.00 0.00 2.44
3947 5398 6.490040 CCCAAAATAGAGAGGTCAGTCAAAAA 59.510 38.462 0.00 0.00 0.00 1.94
3948 5399 7.177392 CCCAAAATAGAGAGGTCAGTCAAAAAT 59.823 37.037 0.00 0.00 0.00 1.82
3949 5400 8.579863 CCAAAATAGAGAGGTCAGTCAAAAATT 58.420 33.333 0.00 0.00 0.00 1.82
3950 5401 9.971922 CAAAATAGAGAGGTCAGTCAAAAATTT 57.028 29.630 0.00 0.00 0.00 1.82
3952 5403 7.929941 ATAGAGAGGTCAGTCAAAAATTTCC 57.070 36.000 0.00 0.00 0.00 3.13
3953 5404 5.694995 AGAGAGGTCAGTCAAAAATTTCCA 58.305 37.500 0.00 0.00 0.00 3.53
3954 5405 5.767168 AGAGAGGTCAGTCAAAAATTTCCAG 59.233 40.000 0.00 0.00 0.00 3.86
3955 5406 5.449553 AGAGGTCAGTCAAAAATTTCCAGT 58.550 37.500 0.00 0.00 0.00 4.00
3956 5407 5.532779 AGAGGTCAGTCAAAAATTTCCAGTC 59.467 40.000 0.00 0.00 0.00 3.51
3976 5427 4.096382 AGTCCAAAACAAGACACATCACAC 59.904 41.667 0.00 0.00 35.38 3.82
3979 5430 3.698029 AAACAAGACACATCACACAGC 57.302 42.857 0.00 0.00 0.00 4.40
4026 5478 2.880890 AGCATCACCAACAGTCAGAAAC 59.119 45.455 0.00 0.00 0.00 2.78
4030 5482 3.130633 TCACCAACAGTCAGAAACATCG 58.869 45.455 0.00 0.00 0.00 3.84
4032 5484 3.059597 CACCAACAGTCAGAAACATCGAC 60.060 47.826 0.00 0.00 0.00 4.20
4033 5485 3.181465 ACCAACAGTCAGAAACATCGACT 60.181 43.478 0.00 0.00 40.60 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.634453 CCTGATTTTAATGGGATGGGCC 59.366 50.000 0.00 0.00 0.00 5.80
2 3 2.634453 CCCTGATTTTAATGGGATGGGC 59.366 50.000 0.00 0.00 42.11 5.36
3 4 3.242011 CCCCTGATTTTAATGGGATGGG 58.758 50.000 0.00 0.00 42.11 4.00
4 5 3.116784 TCCCCCTGATTTTAATGGGATGG 60.117 47.826 0.00 0.00 42.11 3.51
5 6 4.197559 TCCCCCTGATTTTAATGGGATG 57.802 45.455 0.00 0.00 42.11 3.51
6 7 4.916963 TTCCCCCTGATTTTAATGGGAT 57.083 40.909 0.00 0.00 41.50 3.85
7 8 4.701333 TTTCCCCCTGATTTTAATGGGA 57.299 40.909 0.00 0.00 42.11 4.37
8 9 4.968080 TCATTTCCCCCTGATTTTAATGGG 59.032 41.667 0.00 0.00 39.37 4.00
9 10 6.752285 ATCATTTCCCCCTGATTTTAATGG 57.248 37.500 0.00 0.00 0.00 3.16
10 11 9.146586 TCTAATCATTTCCCCCTGATTTTAATG 57.853 33.333 3.40 0.00 41.22 1.90
11 12 9.903190 ATCTAATCATTTCCCCCTGATTTTAAT 57.097 29.630 3.40 0.00 41.22 1.40
12 13 9.728100 AATCTAATCATTTCCCCCTGATTTTAA 57.272 29.630 3.40 0.00 41.22 1.52
13 14 9.146586 CAATCTAATCATTTCCCCCTGATTTTA 57.853 33.333 3.40 0.00 41.22 1.52
14 15 7.071572 CCAATCTAATCATTTCCCCCTGATTTT 59.928 37.037 3.40 0.00 41.22 1.82
15 16 6.556116 CCAATCTAATCATTTCCCCCTGATTT 59.444 38.462 3.40 0.00 41.22 2.17
16 17 6.080009 CCAATCTAATCATTTCCCCCTGATT 58.920 40.000 3.57 3.57 42.92 2.57
17 18 5.376559 TCCAATCTAATCATTTCCCCCTGAT 59.623 40.000 0.00 0.00 33.59 2.90
18 19 4.731416 TCCAATCTAATCATTTCCCCCTGA 59.269 41.667 0.00 0.00 0.00 3.86
19 20 5.065613 TCCAATCTAATCATTTCCCCCTG 57.934 43.478 0.00 0.00 0.00 4.45
20 21 5.749422 TTCCAATCTAATCATTTCCCCCT 57.251 39.130 0.00 0.00 0.00 4.79
21 22 5.305386 CCTTTCCAATCTAATCATTTCCCCC 59.695 44.000 0.00 0.00 0.00 5.40
22 23 6.136155 TCCTTTCCAATCTAATCATTTCCCC 58.864 40.000 0.00 0.00 0.00 4.81
23 24 7.660030 TTCCTTTCCAATCTAATCATTTCCC 57.340 36.000 0.00 0.00 0.00 3.97
24 25 9.942850 TTTTTCCTTTCCAATCTAATCATTTCC 57.057 29.630 0.00 0.00 0.00 3.13
52 53 3.695830 TCATCCTACGGCTGTCTTTTT 57.304 42.857 0.00 0.00 0.00 1.94
53 54 3.695830 TTCATCCTACGGCTGTCTTTT 57.304 42.857 0.00 0.00 0.00 2.27
54 55 3.695830 TTTCATCCTACGGCTGTCTTT 57.304 42.857 0.00 0.00 0.00 2.52
55 56 3.535561 CATTTCATCCTACGGCTGTCTT 58.464 45.455 0.00 0.00 0.00 3.01
56 57 2.158900 CCATTTCATCCTACGGCTGTCT 60.159 50.000 0.00 0.00 0.00 3.41
57 58 2.213499 CCATTTCATCCTACGGCTGTC 58.787 52.381 0.00 0.00 0.00 3.51
58 59 1.134098 CCCATTTCATCCTACGGCTGT 60.134 52.381 2.42 2.42 0.00 4.40
59 60 1.140852 TCCCATTTCATCCTACGGCTG 59.859 52.381 0.00 0.00 0.00 4.85
60 61 1.417890 CTCCCATTTCATCCTACGGCT 59.582 52.381 0.00 0.00 0.00 5.52
61 62 1.884235 CTCCCATTTCATCCTACGGC 58.116 55.000 0.00 0.00 0.00 5.68
62 63 1.140852 TGCTCCCATTTCATCCTACGG 59.859 52.381 0.00 0.00 0.00 4.02
63 64 2.620251 TGCTCCCATTTCATCCTACG 57.380 50.000 0.00 0.00 0.00 3.51
64 65 5.489792 TCTATGCTCCCATTTCATCCTAC 57.510 43.478 0.00 0.00 32.85 3.18
65 66 5.045359 CCATCTATGCTCCCATTTCATCCTA 60.045 44.000 0.00 0.00 32.85 2.94
66 67 4.263816 CCATCTATGCTCCCATTTCATCCT 60.264 45.833 0.00 0.00 32.85 3.24
67 68 4.015084 CCATCTATGCTCCCATTTCATCC 58.985 47.826 0.00 0.00 32.85 3.51
68 69 4.914983 TCCATCTATGCTCCCATTTCATC 58.085 43.478 0.00 0.00 32.85 2.92
69 70 5.322754 CTTCCATCTATGCTCCCATTTCAT 58.677 41.667 0.00 0.00 32.85 2.57
70 71 4.722220 CTTCCATCTATGCTCCCATTTCA 58.278 43.478 0.00 0.00 32.85 2.69
71 72 3.505293 GCTTCCATCTATGCTCCCATTTC 59.495 47.826 0.00 0.00 32.85 2.17
72 73 3.117398 TGCTTCCATCTATGCTCCCATTT 60.117 43.478 0.00 0.00 32.85 2.32
73 74 2.444388 TGCTTCCATCTATGCTCCCATT 59.556 45.455 0.00 0.00 32.85 3.16
74 75 2.060275 TGCTTCCATCTATGCTCCCAT 58.940 47.619 0.00 0.00 35.44 4.00
75 76 1.510492 TGCTTCCATCTATGCTCCCA 58.490 50.000 0.00 0.00 0.00 4.37
76 77 2.434428 CATGCTTCCATCTATGCTCCC 58.566 52.381 0.00 0.00 0.00 4.30
77 78 2.434428 CCATGCTTCCATCTATGCTCC 58.566 52.381 0.00 0.00 0.00 4.70
78 79 2.039480 TCCCATGCTTCCATCTATGCTC 59.961 50.000 0.00 0.00 0.00 4.26
79 80 2.060275 TCCCATGCTTCCATCTATGCT 58.940 47.619 0.00 0.00 0.00 3.79
80 81 2.574006 TCCCATGCTTCCATCTATGC 57.426 50.000 0.00 0.00 0.00 3.14
81 82 3.418995 CCTTCCCATGCTTCCATCTATG 58.581 50.000 0.00 0.00 0.00 2.23
82 83 2.377869 CCCTTCCCATGCTTCCATCTAT 59.622 50.000 0.00 0.00 0.00 1.98
83 84 1.776667 CCCTTCCCATGCTTCCATCTA 59.223 52.381 0.00 0.00 0.00 1.98
84 85 0.554792 CCCTTCCCATGCTTCCATCT 59.445 55.000 0.00 0.00 0.00 2.90
85 86 0.552848 TCCCTTCCCATGCTTCCATC 59.447 55.000 0.00 0.00 0.00 3.51
86 87 0.554792 CTCCCTTCCCATGCTTCCAT 59.445 55.000 0.00 0.00 0.00 3.41
87 88 2.001803 CTCCCTTCCCATGCTTCCA 58.998 57.895 0.00 0.00 0.00 3.53
88 89 1.454663 GCTCCCTTCCCATGCTTCC 60.455 63.158 0.00 0.00 0.00 3.46
89 90 0.750911 CTGCTCCCTTCCCATGCTTC 60.751 60.000 0.00 0.00 0.00 3.86
90 91 1.305623 CTGCTCCCTTCCCATGCTT 59.694 57.895 0.00 0.00 0.00 3.91
91 92 2.687610 CCTGCTCCCTTCCCATGCT 61.688 63.158 0.00 0.00 0.00 3.79
92 93 2.123982 CCTGCTCCCTTCCCATGC 60.124 66.667 0.00 0.00 0.00 4.06
93 94 2.123982 GCCTGCTCCCTTCCCATG 60.124 66.667 0.00 0.00 0.00 3.66
94 95 2.220786 CTTGCCTGCTCCCTTCCCAT 62.221 60.000 0.00 0.00 0.00 4.00
95 96 2.858476 TTGCCTGCTCCCTTCCCA 60.858 61.111 0.00 0.00 0.00 4.37
96 97 2.044551 CTTGCCTGCTCCCTTCCC 60.045 66.667 0.00 0.00 0.00 3.97
97 98 2.753446 GCTTGCCTGCTCCCTTCC 60.753 66.667 0.00 0.00 0.00 3.46
98 99 2.753446 GGCTTGCCTGCTCCCTTC 60.753 66.667 4.11 0.00 0.00 3.46
99 100 4.729918 CGGCTTGCCTGCTCCCTT 62.730 66.667 10.12 0.00 0.00 3.95
102 103 4.496336 ATCCGGCTTGCCTGCTCC 62.496 66.667 10.12 0.00 0.00 4.70
103 104 3.207669 CATCCGGCTTGCCTGCTC 61.208 66.667 10.12 0.00 0.00 4.26
104 105 4.809496 CCATCCGGCTTGCCTGCT 62.809 66.667 10.12 0.00 0.00 4.24
116 117 0.698818 AAATAGGATCCGGGCCATCC 59.301 55.000 13.74 13.74 40.37 3.51
117 118 1.630878 AGAAATAGGATCCGGGCCATC 59.369 52.381 15.32 0.00 0.00 3.51
118 119 1.630878 GAGAAATAGGATCCGGGCCAT 59.369 52.381 15.32 2.12 0.00 4.40
119 120 1.056660 GAGAAATAGGATCCGGGCCA 58.943 55.000 15.32 3.67 0.00 5.36
120 121 0.325272 GGAGAAATAGGATCCGGGCC 59.675 60.000 5.98 3.44 0.00 5.80
121 122 3.938109 GGAGAAATAGGATCCGGGC 57.062 57.895 5.98 0.00 0.00 6.13
125 126 2.610727 CGAAGGCGGAGAAATAGGATCC 60.611 54.545 2.48 2.48 0.00 3.36
126 127 2.036089 ACGAAGGCGGAGAAATAGGATC 59.964 50.000 0.00 0.00 43.17 3.36
127 128 2.040178 ACGAAGGCGGAGAAATAGGAT 58.960 47.619 0.00 0.00 43.17 3.24
128 129 1.481871 ACGAAGGCGGAGAAATAGGA 58.518 50.000 0.00 0.00 43.17 2.94
129 130 2.311124 AACGAAGGCGGAGAAATAGG 57.689 50.000 0.00 0.00 43.17 2.57
130 131 4.680171 AAAAACGAAGGCGGAGAAATAG 57.320 40.909 0.00 0.00 43.17 1.73
148 149 3.739519 CGTCCCACTTGGCATTTGAAAAA 60.740 43.478 0.00 0.00 0.00 1.94
149 150 2.223923 CGTCCCACTTGGCATTTGAAAA 60.224 45.455 0.00 0.00 0.00 2.29
150 151 1.339610 CGTCCCACTTGGCATTTGAAA 59.660 47.619 0.00 0.00 0.00 2.69
151 152 0.958091 CGTCCCACTTGGCATTTGAA 59.042 50.000 0.00 0.00 0.00 2.69
152 153 0.893270 CCGTCCCACTTGGCATTTGA 60.893 55.000 0.00 0.00 0.00 2.69
153 154 1.586028 CCGTCCCACTTGGCATTTG 59.414 57.895 0.00 0.00 0.00 2.32
154 155 1.606313 CCCGTCCCACTTGGCATTT 60.606 57.895 0.00 0.00 0.00 2.32
155 156 2.035626 CCCGTCCCACTTGGCATT 59.964 61.111 0.00 0.00 0.00 3.56
156 157 2.933287 TCCCGTCCCACTTGGCAT 60.933 61.111 0.00 0.00 0.00 4.40
157 158 3.948719 GTCCCGTCCCACTTGGCA 61.949 66.667 0.00 0.00 0.00 4.92
158 159 3.901797 CTGTCCCGTCCCACTTGGC 62.902 68.421 0.00 0.00 0.00 4.52
159 160 2.172483 CTCTGTCCCGTCCCACTTGG 62.172 65.000 0.00 0.00 0.00 3.61
160 161 1.185618 TCTCTGTCCCGTCCCACTTG 61.186 60.000 0.00 0.00 0.00 3.16
161 162 0.252284 ATCTCTGTCCCGTCCCACTT 60.252 55.000 0.00 0.00 0.00 3.16
162 163 0.684805 GATCTCTGTCCCGTCCCACT 60.685 60.000 0.00 0.00 0.00 4.00
163 164 0.970937 TGATCTCTGTCCCGTCCCAC 60.971 60.000 0.00 0.00 0.00 4.61
164 165 0.684479 CTGATCTCTGTCCCGTCCCA 60.684 60.000 0.00 0.00 0.00 4.37
165 166 1.395826 CCTGATCTCTGTCCCGTCCC 61.396 65.000 0.00 0.00 0.00 4.46
166 167 0.684805 ACCTGATCTCTGTCCCGTCC 60.685 60.000 0.00 0.00 0.00 4.79
167 168 0.457851 CACCTGATCTCTGTCCCGTC 59.542 60.000 0.00 0.00 0.00 4.79
168 169 0.039764 TCACCTGATCTCTGTCCCGT 59.960 55.000 0.00 0.00 0.00 5.28
169 170 1.068281 CATCACCTGATCTCTGTCCCG 59.932 57.143 0.00 0.00 31.21 5.14
170 171 1.202627 GCATCACCTGATCTCTGTCCC 60.203 57.143 0.00 0.00 31.21 4.46
171 172 1.483827 TGCATCACCTGATCTCTGTCC 59.516 52.381 0.00 0.00 31.21 4.02
172 173 2.548875 GTGCATCACCTGATCTCTGTC 58.451 52.381 0.00 0.00 31.21 3.51
173 174 1.134877 CGTGCATCACCTGATCTCTGT 60.135 52.381 0.00 0.00 31.21 3.41
174 175 1.134877 ACGTGCATCACCTGATCTCTG 60.135 52.381 0.00 0.00 31.21 3.35
175 176 1.189752 ACGTGCATCACCTGATCTCT 58.810 50.000 0.00 0.00 31.21 3.10
176 177 2.015736 AACGTGCATCACCTGATCTC 57.984 50.000 0.00 0.00 31.21 2.75
177 178 2.079158 CAAACGTGCATCACCTGATCT 58.921 47.619 0.00 0.00 31.21 2.75
178 179 2.532531 CAAACGTGCATCACCTGATC 57.467 50.000 0.00 0.00 31.21 2.92
190 191 0.657077 CACGGTGACATGCAAACGTG 60.657 55.000 20.25 20.25 46.35 4.49
191 192 1.092921 ACACGGTGACATGCAAACGT 61.093 50.000 16.29 5.54 41.25 3.99
192 193 0.657077 CACACGGTGACATGCAAACG 60.657 55.000 16.29 4.26 35.23 3.60
193 194 0.934436 GCACACGGTGACATGCAAAC 60.934 55.000 16.29 0.00 38.00 2.93
194 195 1.358402 GCACACGGTGACATGCAAA 59.642 52.632 16.29 0.00 38.00 3.68
195 196 2.551006 GGCACACGGTGACATGCAA 61.551 57.895 16.29 0.00 41.94 4.08
196 197 2.977456 GGCACACGGTGACATGCA 60.977 61.111 16.29 0.00 41.94 3.96
197 198 3.737172 GGGCACACGGTGACATGC 61.737 66.667 16.29 13.96 44.59 4.06
198 199 2.032528 AGGGCACACGGTGACATG 59.967 61.111 16.29 3.91 44.59 3.21
199 200 2.032528 CAGGGCACACGGTGACAT 59.967 61.111 16.29 2.03 44.59 3.06
200 201 4.927782 GCAGGGCACACGGTGACA 62.928 66.667 16.29 0.00 44.59 3.58
214 215 0.819582 AATTTGAATGGAGGCCGCAG 59.180 50.000 9.31 0.00 0.00 5.18
215 216 1.265236 AAATTTGAATGGAGGCCGCA 58.735 45.000 9.31 0.00 0.00 5.69
216 217 3.518634 TTAAATTTGAATGGAGGCCGC 57.481 42.857 0.00 0.00 0.00 6.53
217 218 4.815269 TGTTTAAATTTGAATGGAGGCCG 58.185 39.130 0.00 0.00 0.00 6.13
218 219 6.403527 GCAATGTTTAAATTTGAATGGAGGCC 60.404 38.462 14.55 0.00 0.00 5.19
219 220 6.149142 TGCAATGTTTAAATTTGAATGGAGGC 59.851 34.615 14.55 2.39 0.00 4.70
220 221 7.670009 TGCAATGTTTAAATTTGAATGGAGG 57.330 32.000 14.55 0.00 0.00 4.30
257 258 2.669434 GCTGCGAACATGCATGATTTTT 59.331 40.909 32.75 16.45 45.26 1.94
258 259 2.264813 GCTGCGAACATGCATGATTTT 58.735 42.857 32.75 16.83 45.26 1.82
259 260 1.202817 TGCTGCGAACATGCATGATTT 59.797 42.857 32.75 17.59 45.26 2.17
260 261 0.812549 TGCTGCGAACATGCATGATT 59.187 45.000 32.75 21.39 45.26 2.57
261 262 0.099968 GTGCTGCGAACATGCATGAT 59.900 50.000 32.75 22.02 45.26 2.45
262 263 1.235948 TGTGCTGCGAACATGCATGA 61.236 50.000 32.75 9.30 45.26 3.07
263 264 0.179148 ATGTGCTGCGAACATGCATG 60.179 50.000 25.09 25.09 45.26 4.06
264 265 1.381522 TATGTGCTGCGAACATGCAT 58.618 45.000 13.92 0.00 45.26 3.96
265 266 1.381522 ATATGTGCTGCGAACATGCA 58.618 45.000 13.92 0.00 43.95 3.96
266 267 2.480224 AATATGTGCTGCGAACATGC 57.520 45.000 13.92 0.00 38.67 4.06
267 268 5.408204 TCTTAATATGTGCTGCGAACATG 57.592 39.130 13.92 0.00 38.67 3.21
268 269 7.442364 AGTTATCTTAATATGTGCTGCGAACAT 59.558 33.333 10.03 10.03 41.14 2.71
269 270 6.761242 AGTTATCTTAATATGTGCTGCGAACA 59.239 34.615 0.00 0.00 0.00 3.18
270 271 7.178712 AGTTATCTTAATATGTGCTGCGAAC 57.821 36.000 0.00 0.00 0.00 3.95
271 272 6.423905 GGAGTTATCTTAATATGTGCTGCGAA 59.576 38.462 0.00 0.00 0.00 4.70
272 273 5.926542 GGAGTTATCTTAATATGTGCTGCGA 59.073 40.000 0.00 0.00 0.00 5.10
273 274 5.928839 AGGAGTTATCTTAATATGTGCTGCG 59.071 40.000 0.00 0.00 0.00 5.18
274 275 8.833231 TTAGGAGTTATCTTAATATGTGCTGC 57.167 34.615 0.00 0.00 0.00 5.25
320 321 9.884465 CTCTTCTTTGTTTCTCGATGTATTTTT 57.116 29.630 0.00 0.00 0.00 1.94
321 322 9.273016 TCTCTTCTTTGTTTCTCGATGTATTTT 57.727 29.630 0.00 0.00 0.00 1.82
322 323 8.833231 TCTCTTCTTTGTTTCTCGATGTATTT 57.167 30.769 0.00 0.00 0.00 1.40
323 324 8.833231 TTCTCTTCTTTGTTTCTCGATGTATT 57.167 30.769 0.00 0.00 0.00 1.89
324 325 8.713271 GTTTCTCTTCTTTGTTTCTCGATGTAT 58.287 33.333 0.00 0.00 0.00 2.29
325 326 7.926555 AGTTTCTCTTCTTTGTTTCTCGATGTA 59.073 33.333 0.00 0.00 0.00 2.29
326 327 6.763610 AGTTTCTCTTCTTTGTTTCTCGATGT 59.236 34.615 0.00 0.00 0.00 3.06
327 328 7.042456 TGAGTTTCTCTTCTTTGTTTCTCGATG 60.042 37.037 0.00 0.00 0.00 3.84
328 329 6.986817 TGAGTTTCTCTTCTTTGTTTCTCGAT 59.013 34.615 0.00 0.00 0.00 3.59
329 330 6.338146 TGAGTTTCTCTTCTTTGTTTCTCGA 58.662 36.000 0.00 0.00 0.00 4.04
330 331 6.477033 TCTGAGTTTCTCTTCTTTGTTTCTCG 59.523 38.462 0.00 0.00 0.00 4.04
331 332 7.778470 TCTGAGTTTCTCTTCTTTGTTTCTC 57.222 36.000 0.00 0.00 0.00 2.87
332 333 7.772757 ACATCTGAGTTTCTCTTCTTTGTTTCT 59.227 33.333 0.00 0.00 0.00 2.52
333 334 7.854916 CACATCTGAGTTTCTCTTCTTTGTTTC 59.145 37.037 0.00 0.00 0.00 2.78
334 335 7.554118 TCACATCTGAGTTTCTCTTCTTTGTTT 59.446 33.333 0.00 0.00 0.00 2.83
335 336 7.050377 TCACATCTGAGTTTCTCTTCTTTGTT 58.950 34.615 0.00 0.00 0.00 2.83
336 337 6.586344 TCACATCTGAGTTTCTCTTCTTTGT 58.414 36.000 0.00 0.00 0.00 2.83
337 338 7.226325 AGTTCACATCTGAGTTTCTCTTCTTTG 59.774 37.037 0.00 0.00 0.00 2.77
338 339 7.226325 CAGTTCACATCTGAGTTTCTCTTCTTT 59.774 37.037 0.00 0.00 35.20 2.52
339 340 6.705381 CAGTTCACATCTGAGTTTCTCTTCTT 59.295 38.462 0.00 0.00 35.20 2.52
340 341 6.183360 ACAGTTCACATCTGAGTTTCTCTTCT 60.183 38.462 0.00 0.00 36.81 2.85
341 342 5.988561 ACAGTTCACATCTGAGTTTCTCTTC 59.011 40.000 0.00 0.00 36.81 2.87
342 343 5.923204 ACAGTTCACATCTGAGTTTCTCTT 58.077 37.500 0.00 0.00 36.81 2.85
343 344 5.537188 GACAGTTCACATCTGAGTTTCTCT 58.463 41.667 0.00 0.00 36.81 3.10
344 345 4.384247 CGACAGTTCACATCTGAGTTTCTC 59.616 45.833 0.00 0.00 36.81 2.87
345 346 4.202161 ACGACAGTTCACATCTGAGTTTCT 60.202 41.667 0.00 0.00 36.81 2.52
346 347 4.051922 ACGACAGTTCACATCTGAGTTTC 58.948 43.478 0.00 0.00 36.81 2.78
347 348 3.804325 CACGACAGTTCACATCTGAGTTT 59.196 43.478 0.00 0.00 36.81 2.66
348 349 3.384668 CACGACAGTTCACATCTGAGTT 58.615 45.455 0.00 0.00 36.81 3.01
349 350 2.288457 CCACGACAGTTCACATCTGAGT 60.288 50.000 0.00 0.00 36.81 3.41
350 351 2.332104 CCACGACAGTTCACATCTGAG 58.668 52.381 0.00 0.00 36.81 3.35
351 352 1.000843 CCCACGACAGTTCACATCTGA 59.999 52.381 0.00 0.00 36.81 3.27
352 353 1.432514 CCCACGACAGTTCACATCTG 58.567 55.000 0.00 0.00 38.68 2.90
353 354 0.321671 CCCCACGACAGTTCACATCT 59.678 55.000 0.00 0.00 0.00 2.90
354 355 0.673644 CCCCCACGACAGTTCACATC 60.674 60.000 0.00 0.00 0.00 3.06
355 356 1.125093 TCCCCCACGACAGTTCACAT 61.125 55.000 0.00 0.00 0.00 3.21
356 357 1.754380 CTCCCCCACGACAGTTCACA 61.754 60.000 0.00 0.00 0.00 3.58
357 358 1.004918 CTCCCCCACGACAGTTCAC 60.005 63.158 0.00 0.00 0.00 3.18
358 359 0.761323 TTCTCCCCCACGACAGTTCA 60.761 55.000 0.00 0.00 0.00 3.18
359 360 0.037232 CTTCTCCCCCACGACAGTTC 60.037 60.000 0.00 0.00 0.00 3.01
360 361 2.058675 CTTCTCCCCCACGACAGTT 58.941 57.895 0.00 0.00 0.00 3.16
361 362 2.584391 GCTTCTCCCCCACGACAGT 61.584 63.158 0.00 0.00 0.00 3.55
362 363 2.266055 GCTTCTCCCCCACGACAG 59.734 66.667 0.00 0.00 0.00 3.51
363 364 3.319198 GGCTTCTCCCCCACGACA 61.319 66.667 0.00 0.00 0.00 4.35
364 365 3.316573 CTGGCTTCTCCCCCACGAC 62.317 68.421 0.00 0.00 0.00 4.34
365 366 2.822643 ATCTGGCTTCTCCCCCACGA 62.823 60.000 0.00 0.00 0.00 4.35
373 374 0.529555 GCTCGACCATCTGGCTTCTC 60.530 60.000 0.00 0.00 39.32 2.87
386 387 2.430921 CACCGGTCACTGCTCGAC 60.431 66.667 2.59 0.00 0.00 4.20
388 389 3.991051 ACCACCGGTCACTGCTCG 61.991 66.667 2.59 0.00 0.00 5.03
392 393 1.405526 CCTAATCACCACCGGTCACTG 60.406 57.143 2.59 0.00 31.02 3.66
405 406 3.354948 AGCAAGCACATGTCCTAATCA 57.645 42.857 0.00 0.00 0.00 2.57
414 415 0.308684 ACACGTGAAGCAAGCACATG 59.691 50.000 25.01 0.00 35.74 3.21
442 443 5.444350 CGTATTTTTACGCCGTGTAATCACA 60.444 40.000 0.00 0.00 42.45 3.58
534 535 2.231380 GGAGGAGGCAGGGGAAACA 61.231 63.158 0.00 0.00 0.00 2.83
553 554 3.252484 GACCGCATACGTCGCCAC 61.252 66.667 0.00 0.00 37.70 5.01
555 556 2.954868 CAGACCGCATACGTCGCC 60.955 66.667 0.00 0.00 37.70 5.54
566 567 0.392998 ATTACAAGGCCAGCAGACCG 60.393 55.000 5.01 0.00 0.00 4.79
594 595 1.738030 GCCAAGGCTGTGAATCATTGC 60.738 52.381 3.29 2.64 38.26 3.56
655 656 2.202676 GAGAGGACGCTTGGCTCG 60.203 66.667 0.00 0.00 0.00 5.03
679 680 1.154188 GTGAGCGAGTCGACAGTCC 60.154 63.158 18.61 7.86 0.00 3.85
684 685 2.126424 GTGGGTGAGCGAGTCGAC 60.126 66.667 18.61 7.70 0.00 4.20
685 686 1.977009 ATGTGGGTGAGCGAGTCGA 60.977 57.895 18.61 0.00 0.00 4.20
687 688 1.448540 CCATGTGGGTGAGCGAGTC 60.449 63.158 0.00 0.00 0.00 3.36
688 689 2.665000 CCATGTGGGTGAGCGAGT 59.335 61.111 0.00 0.00 0.00 4.18
689 690 2.821366 GCCATGTGGGTGAGCGAG 60.821 66.667 0.54 0.00 39.65 5.03
729 749 4.935808 ACAAATTAGTTCCTACTTGCTCCG 59.064 41.667 0.00 0.00 35.78 4.63
746 766 2.359900 GATGGACGCAGAGGACAAATT 58.640 47.619 0.00 0.00 0.00 1.82
747 767 1.740380 CGATGGACGCAGAGGACAAAT 60.740 52.381 0.00 0.00 34.51 2.32
748 768 0.389817 CGATGGACGCAGAGGACAAA 60.390 55.000 0.00 0.00 34.51 2.83
749 769 1.215382 CGATGGACGCAGAGGACAA 59.785 57.895 0.00 0.00 34.51 3.18
811 839 1.134699 TGAATGATGCAGGACGAGGAC 60.135 52.381 0.00 0.00 0.00 3.85
824 852 1.893808 GCCCGTCGCCATGAATGAT 60.894 57.895 0.00 0.00 0.00 2.45
930 966 2.699954 CACCGTCTTCTTGGCAAGTAT 58.300 47.619 25.39 0.00 0.00 2.12
936 981 1.648467 GGATGCACCGTCTTCTTGGC 61.648 60.000 0.00 0.00 0.00 4.52
976 1037 3.839432 CTCCGCCCCTCCTCGTTC 61.839 72.222 0.00 0.00 0.00 3.95
977 1038 4.377760 TCTCCGCCCCTCCTCGTT 62.378 66.667 0.00 0.00 0.00 3.85
978 1039 4.824515 CTCTCCGCCCCTCCTCGT 62.825 72.222 0.00 0.00 0.00 4.18
979 1040 4.507916 TCTCTCCGCCCCTCCTCG 62.508 72.222 0.00 0.00 0.00 4.63
980 1041 2.520741 CTCTCTCCGCCCCTCCTC 60.521 72.222 0.00 0.00 0.00 3.71
1089 1153 2.434359 GCTCGGCAGTACACCACC 60.434 66.667 5.86 0.00 0.00 4.61
1254 1318 0.170561 GCTCCTCGAAGTCGCAGTTA 59.829 55.000 0.00 0.00 39.60 2.24
1284 1348 3.670629 CTCCGTCAGCTCCCCCTCT 62.671 68.421 0.00 0.00 0.00 3.69
1386 1450 0.319555 CTTTGTCGCCGAGGAAGACA 60.320 55.000 13.92 13.92 42.36 3.41
1390 1454 2.736995 CGCTTTGTCGCCGAGGAA 60.737 61.111 0.00 0.00 0.00 3.36
1508 1572 3.088923 CCAACCTTGGGAGAGGAGA 57.911 57.895 0.00 0.00 44.70 3.71
1546 1616 3.063180 GTGATACTGTTTGCTGCTGCTAG 59.937 47.826 17.00 11.48 40.48 3.42
1547 1617 3.002791 GTGATACTGTTTGCTGCTGCTA 58.997 45.455 17.00 6.36 40.48 3.49
1548 1618 1.808945 GTGATACTGTTTGCTGCTGCT 59.191 47.619 17.00 0.00 40.48 4.24
1549 1619 1.464687 CGTGATACTGTTTGCTGCTGC 60.465 52.381 8.89 8.89 40.20 5.25
1550 1620 1.464687 GCGTGATACTGTTTGCTGCTG 60.465 52.381 0.00 0.00 0.00 4.41
1551 1621 0.798776 GCGTGATACTGTTTGCTGCT 59.201 50.000 0.00 0.00 0.00 4.24
1552 1622 0.516877 TGCGTGATACTGTTTGCTGC 59.483 50.000 0.00 0.00 0.00 5.25
1553 1623 2.068519 TCTGCGTGATACTGTTTGCTG 58.931 47.619 0.00 0.00 0.00 4.41
1554 1624 2.455674 TCTGCGTGATACTGTTTGCT 57.544 45.000 0.00 0.00 0.00 3.91
1565 1635 1.402325 CGGTGAACAGTATCTGCGTGA 60.402 52.381 0.00 0.00 34.37 4.35
1568 1638 1.269166 GACGGTGAACAGTATCTGCG 58.731 55.000 0.00 0.00 34.37 5.18
1573 1643 1.217244 GCCGGACGGTGAACAGTAT 59.783 57.895 5.05 0.00 37.65 2.12
1595 1665 3.161306 GTGCTTTCTATTCCGTTTTCGC 58.839 45.455 0.00 0.00 42.58 4.70
1602 1672 3.304559 CAGAGAACGTGCTTTCTATTCCG 59.695 47.826 0.00 0.00 35.90 4.30
1607 1677 3.258372 ACCATCAGAGAACGTGCTTTCTA 59.742 43.478 0.00 0.00 35.90 2.10
1614 1684 3.563808 TGGAAAAACCATCAGAGAACGTG 59.436 43.478 0.00 0.00 44.64 4.49
1615 1685 3.815809 TGGAAAAACCATCAGAGAACGT 58.184 40.909 0.00 0.00 44.64 3.99
1636 1706 2.877786 CACACACACACACACCATATGT 59.122 45.455 1.24 0.00 44.81 2.29
1637 1707 2.877786 ACACACACACACACACCATATG 59.122 45.455 0.00 0.00 0.00 1.78
1638 1708 2.877786 CACACACACACACACACCATAT 59.122 45.455 0.00 0.00 0.00 1.78
1639 1709 2.284190 CACACACACACACACACCATA 58.716 47.619 0.00 0.00 0.00 2.74
1640 1710 1.093972 CACACACACACACACACCAT 58.906 50.000 0.00 0.00 0.00 3.55
1641 1711 0.250510 ACACACACACACACACACCA 60.251 50.000 0.00 0.00 0.00 4.17
1642 1712 0.167908 CACACACACACACACACACC 59.832 55.000 0.00 0.00 0.00 4.16
1643 1713 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1644 1714 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1645 1715 0.454285 GCACACACACACACACACAC 60.454 55.000 0.00 0.00 0.00 3.82
1646 1716 0.886490 TGCACACACACACACACACA 60.886 50.000 0.00 0.00 0.00 3.72
1647 1717 0.239613 TTGCACACACACACACACAC 59.760 50.000 0.00 0.00 0.00 3.82
1648 1718 0.520847 CTTGCACACACACACACACA 59.479 50.000 0.00 0.00 0.00 3.72
1649 1719 0.801872 TCTTGCACACACACACACAC 59.198 50.000 0.00 0.00 0.00 3.82
1650 1720 1.198867 GTTCTTGCACACACACACACA 59.801 47.619 0.00 0.00 0.00 3.72
1651 1721 1.467374 GGTTCTTGCACACACACACAC 60.467 52.381 0.00 0.00 0.00 3.82
1652 1722 0.808125 GGTTCTTGCACACACACACA 59.192 50.000 0.00 0.00 0.00 3.72
1653 1723 0.248054 CGGTTCTTGCACACACACAC 60.248 55.000 0.00 0.00 0.00 3.82
1654 1724 1.372838 CCGGTTCTTGCACACACACA 61.373 55.000 0.00 0.00 0.00 3.72
1655 1725 1.092921 TCCGGTTCTTGCACACACAC 61.093 55.000 0.00 0.00 0.00 3.82
1656 1726 0.813610 CTCCGGTTCTTGCACACACA 60.814 55.000 0.00 0.00 0.00 3.72
1657 1727 1.941812 CTCCGGTTCTTGCACACAC 59.058 57.895 0.00 0.00 0.00 3.82
1724 1794 2.282958 TCCTCCGACTTGGCGAGT 60.283 61.111 7.22 7.22 42.70 4.18
1748 1818 1.392710 CCGGGTCCTCGACATAAGCT 61.393 60.000 0.00 0.00 33.68 3.74
1749 1819 1.067582 CCGGGTCCTCGACATAAGC 59.932 63.158 0.00 0.00 33.68 3.09
1751 1821 1.389609 GCTCCGGGTCCTCGACATAA 61.390 60.000 0.00 0.00 33.68 1.90
1752 1822 1.826921 GCTCCGGGTCCTCGACATA 60.827 63.158 0.00 0.00 33.68 2.29
1753 1823 3.148279 GCTCCGGGTCCTCGACAT 61.148 66.667 0.00 0.00 33.68 3.06
1795 1865 2.550855 GCGCAATCTGAAGATCCCCATA 60.551 50.000 0.30 0.00 32.75 2.74
1813 1886 4.241999 CGTGCCCAATAGCAGCGC 62.242 66.667 0.00 0.00 45.14 5.92
1892 1965 7.696992 TCAAATTAAGTTCCCAACCTGATAC 57.303 36.000 0.00 0.00 0.00 2.24
1894 1967 7.797121 ATTCAAATTAAGTTCCCAACCTGAT 57.203 32.000 0.00 0.00 0.00 2.90
1935 2009 6.264292 ACGTATGATAGTCAGCAAGAGAGAAT 59.736 38.462 0.00 0.00 0.00 2.40
1936 2010 5.590663 ACGTATGATAGTCAGCAAGAGAGAA 59.409 40.000 0.00 0.00 0.00 2.87
1942 2016 3.488678 CAGCACGTATGATAGTCAGCAAG 59.511 47.826 0.00 0.00 0.00 4.01
1943 2017 3.119137 ACAGCACGTATGATAGTCAGCAA 60.119 43.478 6.92 0.00 0.00 3.91
1944 2018 2.427095 ACAGCACGTATGATAGTCAGCA 59.573 45.455 6.92 0.00 0.00 4.41
1945 2019 2.791560 CACAGCACGTATGATAGTCAGC 59.208 50.000 6.92 0.00 0.00 4.26
1946 2020 4.033990 ACACAGCACGTATGATAGTCAG 57.966 45.455 6.92 0.00 0.00 3.51
1947 2021 4.421058 GAACACAGCACGTATGATAGTCA 58.579 43.478 6.92 0.00 0.00 3.41
1948 2022 3.482472 CGAACACAGCACGTATGATAGTC 59.518 47.826 6.92 0.00 0.00 2.59
1949 2023 3.119602 ACGAACACAGCACGTATGATAGT 60.120 43.478 6.92 0.74 38.47 2.12
1950 2024 3.435566 ACGAACACAGCACGTATGATAG 58.564 45.455 6.92 0.21 38.47 2.08
1951 2025 3.497297 ACGAACACAGCACGTATGATA 57.503 42.857 6.92 0.00 38.47 2.15
1952 2026 2.363788 ACGAACACAGCACGTATGAT 57.636 45.000 6.92 0.00 38.47 2.45
1954 2028 1.136363 CCAACGAACACAGCACGTATG 60.136 52.381 0.00 0.00 39.31 2.39
1955 2029 1.144969 CCAACGAACACAGCACGTAT 58.855 50.000 0.00 0.00 39.31 3.06
1956 2030 0.102663 TCCAACGAACACAGCACGTA 59.897 50.000 0.00 0.00 39.31 3.57
1957 2031 1.151777 CTCCAACGAACACAGCACGT 61.152 55.000 0.00 0.00 41.97 4.49
1958 2032 1.564622 CTCCAACGAACACAGCACG 59.435 57.895 0.00 0.00 0.00 5.34
1959 2033 1.279840 GCTCCAACGAACACAGCAC 59.720 57.895 0.00 0.00 0.00 4.40
1960 2034 1.153269 TGCTCCAACGAACACAGCA 60.153 52.632 0.00 0.00 37.76 4.41
1961 2035 1.160329 AGTGCTCCAACGAACACAGC 61.160 55.000 0.00 0.00 37.52 4.40
1962 2036 2.148916 TAGTGCTCCAACGAACACAG 57.851 50.000 0.00 0.00 37.52 3.66
1964 2038 1.654105 CGATAGTGCTCCAACGAACAC 59.346 52.381 0.00 0.00 35.67 3.32
1965 2039 1.542472 TCGATAGTGCTCCAACGAACA 59.458 47.619 0.00 0.00 37.40 3.18
1966 2040 2.273370 TCGATAGTGCTCCAACGAAC 57.727 50.000 0.00 0.00 37.40 3.95
1969 2043 1.258982 GCATTCGATAGTGCTCCAACG 59.741 52.381 9.80 0.00 38.30 4.10
1970 2044 2.030946 GTGCATTCGATAGTGCTCCAAC 59.969 50.000 15.83 5.42 41.78 3.77
1972 2046 1.206849 TGTGCATTCGATAGTGCTCCA 59.793 47.619 15.83 10.97 41.78 3.86
1973 2047 1.939974 TGTGCATTCGATAGTGCTCC 58.060 50.000 15.83 9.14 41.78 4.70
1974 2048 3.126073 TCATGTGCATTCGATAGTGCTC 58.874 45.455 15.83 13.33 41.78 4.26
1989 2064 4.030865 CGCACATTTTTACTGCATCATGTG 59.969 41.667 12.27 12.27 42.86 3.21
1993 2068 2.030451 TGCGCACATTTTTACTGCATCA 60.030 40.909 5.66 0.00 0.00 3.07
1994 2069 2.594321 TGCGCACATTTTTACTGCATC 58.406 42.857 5.66 0.00 0.00 3.91
2004 2079 4.996758 TGCTCATATATACTGCGCACATTT 59.003 37.500 5.66 0.43 29.98 2.32
2008 2083 2.926200 CCTGCTCATATATACTGCGCAC 59.074 50.000 5.66 0.00 31.58 5.34
2010 2085 2.544685 CCCTGCTCATATATACTGCGC 58.455 52.381 0.00 0.00 0.00 6.09
2011 2086 2.094026 TGCCCTGCTCATATATACTGCG 60.094 50.000 0.00 0.00 0.00 5.18
2017 2092 7.739995 TTCTACTAATGCCCTGCTCATATAT 57.260 36.000 0.00 0.00 0.00 0.86
2019 2094 6.633325 ATTCTACTAATGCCCTGCTCATAT 57.367 37.500 0.00 0.00 0.00 1.78
2020 2095 6.726299 ACTATTCTACTAATGCCCTGCTCATA 59.274 38.462 0.00 0.00 0.00 2.15
2024 2464 6.078664 AGTACTATTCTACTAATGCCCTGCT 58.921 40.000 0.00 0.00 0.00 4.24
2025 2465 6.209788 AGAGTACTATTCTACTAATGCCCTGC 59.790 42.308 0.00 0.00 0.00 4.85
2028 2468 7.886446 AGAGAGAGTACTATTCTACTAATGCCC 59.114 40.741 8.86 0.00 0.00 5.36
2065 2505 8.407064 CCTTCGTAGTGATCTAAACACTCTTAT 58.593 37.037 0.00 0.00 45.58 1.73
2066 2506 7.609146 TCCTTCGTAGTGATCTAAACACTCTTA 59.391 37.037 0.00 0.00 45.58 2.10
2067 2507 6.433404 TCCTTCGTAGTGATCTAAACACTCTT 59.567 38.462 0.00 0.00 45.58 2.85
2068 2508 5.944599 TCCTTCGTAGTGATCTAAACACTCT 59.055 40.000 0.00 0.00 45.58 3.24
2069 2509 6.192234 TCCTTCGTAGTGATCTAAACACTC 57.808 41.667 0.00 0.00 45.58 3.51
2071 2511 6.388278 ACTTCCTTCGTAGTGATCTAAACAC 58.612 40.000 0.00 0.00 38.38 3.32
2072 2512 6.585695 ACTTCCTTCGTAGTGATCTAAACA 57.414 37.500 0.00 0.00 0.00 2.83
2073 2513 7.760437 AGTACTTCCTTCGTAGTGATCTAAAC 58.240 38.462 0.00 0.00 0.00 2.01
2074 2514 7.934855 AGTACTTCCTTCGTAGTGATCTAAA 57.065 36.000 0.00 0.00 0.00 1.85
2075 2515 9.624373 AATAGTACTTCCTTCGTAGTGATCTAA 57.376 33.333 0.00 0.00 0.00 2.10
2076 2516 9.624373 AAATAGTACTTCCTTCGTAGTGATCTA 57.376 33.333 0.00 0.00 0.00 1.98
2077 2517 8.522542 AAATAGTACTTCCTTCGTAGTGATCT 57.477 34.615 0.00 0.00 0.00 2.75
2078 2518 9.583765 AAAAATAGTACTTCCTTCGTAGTGATC 57.416 33.333 0.00 0.00 0.00 2.92
2101 2541 4.662278 ACTCTACTAATGCCCTGCAAAAA 58.338 39.130 0.00 0.00 43.62 1.94
2102 2542 4.301072 ACTCTACTAATGCCCTGCAAAA 57.699 40.909 0.00 0.00 43.62 2.44
2103 2543 4.469945 AGTACTCTACTAATGCCCTGCAAA 59.530 41.667 0.00 0.00 38.68 3.68
2104 2544 4.030913 AGTACTCTACTAATGCCCTGCAA 58.969 43.478 0.00 0.00 38.68 4.08
2105 2545 3.643237 AGTACTCTACTAATGCCCTGCA 58.357 45.455 0.00 0.00 39.24 4.41
2106 2546 4.828387 ACTAGTACTCTACTAATGCCCTGC 59.172 45.833 0.00 0.00 40.49 4.85
2107 2547 6.320494 CACTAGTACTCTACTAATGCCCTG 57.680 45.833 0.00 0.00 40.49 4.45
2112 2552 6.321690 AGGGTTGCACTAGTACTCTACTAATG 59.678 42.308 0.00 0.00 40.42 1.90
2113 2553 6.433441 AGGGTTGCACTAGTACTCTACTAAT 58.567 40.000 0.00 0.00 40.49 1.73
2114 2554 5.824421 AGGGTTGCACTAGTACTCTACTAA 58.176 41.667 0.00 0.00 40.49 2.24
2115 2555 5.435291 GAGGGTTGCACTAGTACTCTACTA 58.565 45.833 0.00 0.00 40.14 1.82
2116 2556 4.271661 GAGGGTTGCACTAGTACTCTACT 58.728 47.826 0.00 0.00 42.68 2.57
2117 2557 3.380954 GGAGGGTTGCACTAGTACTCTAC 59.619 52.174 0.00 0.00 0.00 2.59
2118 2558 3.010920 TGGAGGGTTGCACTAGTACTCTA 59.989 47.826 0.00 0.00 0.00 2.43
2119 2559 2.225293 TGGAGGGTTGCACTAGTACTCT 60.225 50.000 0.00 0.00 0.00 3.24
2120 2560 2.176889 TGGAGGGTTGCACTAGTACTC 58.823 52.381 0.00 0.00 0.00 2.59
2121 2561 2.302157 GTTGGAGGGTTGCACTAGTACT 59.698 50.000 0.00 0.00 0.00 2.73
2122 2562 2.696506 GTTGGAGGGTTGCACTAGTAC 58.303 52.381 0.00 0.00 0.00 2.73
2123 2563 1.274167 CGTTGGAGGGTTGCACTAGTA 59.726 52.381 0.00 0.00 0.00 1.82
2124 2564 0.034896 CGTTGGAGGGTTGCACTAGT 59.965 55.000 0.00 0.00 0.00 2.57
2125 2565 0.034896 ACGTTGGAGGGTTGCACTAG 59.965 55.000 0.00 0.00 0.00 2.57
2126 2566 1.340088 TACGTTGGAGGGTTGCACTA 58.660 50.000 0.00 0.00 0.00 2.74
2127 2567 0.470766 TTACGTTGGAGGGTTGCACT 59.529 50.000 0.00 0.00 0.00 4.40
2128 2568 0.589708 GTTACGTTGGAGGGTTGCAC 59.410 55.000 0.00 0.00 0.00 4.57
2129 2569 0.180642 TGTTACGTTGGAGGGTTGCA 59.819 50.000 0.00 0.00 0.00 4.08
2130 2570 1.467342 GATGTTACGTTGGAGGGTTGC 59.533 52.381 0.00 0.00 0.00 4.17
2131 2571 3.000727 GAGATGTTACGTTGGAGGGTTG 58.999 50.000 0.00 0.00 0.00 3.77
2132 2572 2.027469 GGAGATGTTACGTTGGAGGGTT 60.027 50.000 0.00 0.00 0.00 4.11
2133 2573 1.553704 GGAGATGTTACGTTGGAGGGT 59.446 52.381 0.00 0.00 0.00 4.34
2134 2574 1.553248 TGGAGATGTTACGTTGGAGGG 59.447 52.381 0.00 0.00 0.00 4.30
2135 2575 3.543680 ATGGAGATGTTACGTTGGAGG 57.456 47.619 0.00 0.00 0.00 4.30
2136 2576 5.063944 CAGAAATGGAGATGTTACGTTGGAG 59.936 44.000 0.00 0.00 0.00 3.86
2137 2577 4.935205 CAGAAATGGAGATGTTACGTTGGA 59.065 41.667 0.00 0.00 0.00 3.53
2143 2583 5.940470 ACTTGGACAGAAATGGAGATGTTAC 59.060 40.000 0.00 0.00 0.00 2.50
2171 2611 3.679980 CACTAGATGAAAGGTTGTGGTCG 59.320 47.826 0.00 0.00 0.00 4.79
2184 2624 5.642063 GGGAACGTTTTCATTCACTAGATGA 59.358 40.000 0.46 0.00 32.80 2.92
2196 2636 4.008330 TGTACAAGTTGGGAACGTTTTCA 58.992 39.130 7.96 0.92 36.23 2.69
2207 2647 6.567687 TTTATGTGATGGTGTACAAGTTGG 57.432 37.500 7.96 0.00 0.00 3.77
2253 2693 5.508320 CGAAAAGATCCTCCTTAGCTACTCC 60.508 48.000 0.00 0.00 0.00 3.85
2267 2707 2.347697 GGTTGCAACCGAAAAGATCC 57.652 50.000 31.73 6.25 39.66 3.36
2288 2728 8.149647 TCTAAGACACTACAGGAGTATACTAGC 58.850 40.741 5.09 0.00 35.64 3.42
2329 2786 6.932356 AGTGACACTATCAAATATGCCAAG 57.068 37.500 6.24 0.00 39.72 3.61
2333 2790 9.929180 TCCTATTAGTGACACTATCAAATATGC 57.071 33.333 15.93 0.00 39.72 3.14
2348 2820 9.982651 CCGAAGAAATTAAGATCCTATTAGTGA 57.017 33.333 0.00 0.00 0.00 3.41
2364 2836 1.305930 GCTGGCGGACCGAAGAAATT 61.306 55.000 20.50 0.00 39.70 1.82
2378 2853 1.959282 CTGATAGGGATTTTGGCTGGC 59.041 52.381 0.00 0.00 0.00 4.85
2382 2857 5.450550 GCTTTGTACTGATAGGGATTTTGGC 60.451 44.000 0.00 0.00 0.00 4.52
2385 2860 5.826643 TGGCTTTGTACTGATAGGGATTTT 58.173 37.500 0.00 0.00 0.00 1.82
2394 2869 3.127548 CGCATTCTTGGCTTTGTACTGAT 59.872 43.478 0.00 0.00 0.00 2.90
2410 2885 0.166814 GAGCTGGTTGTCACGCATTC 59.833 55.000 0.00 0.00 0.00 2.67
2417 2892 2.880268 CTGAAACATGAGCTGGTTGTCA 59.120 45.455 0.00 0.01 33.94 3.58
2427 2902 5.337554 CAATGCATGGTACTGAAACATGAG 58.662 41.667 0.00 0.00 43.46 2.90
2453 3029 4.628074 TCTACTGTTGCTGTACTGAAACC 58.372 43.478 18.15 4.28 0.00 3.27
2462 3038 4.099266 TGGCAAATTTTCTACTGTTGCTGT 59.901 37.500 6.64 0.00 43.20 4.40
2534 3143 4.479993 ATCCACGCCTCCTGCAGC 62.480 66.667 8.66 0.00 41.33 5.25
2535 3144 2.202987 GATCCACGCCTCCTGCAG 60.203 66.667 6.78 6.78 41.33 4.41
2536 3145 4.147449 CGATCCACGCCTCCTGCA 62.147 66.667 0.00 0.00 41.33 4.41
2755 3367 3.889134 TTGGTCGCCTGAGCTGCAG 62.889 63.158 10.11 10.11 43.09 4.41
2756 3368 3.889134 CTTGGTCGCCTGAGCTGCA 62.889 63.158 1.02 0.00 43.09 4.41
2757 3369 3.123620 CTTGGTCGCCTGAGCTGC 61.124 66.667 0.00 0.00 43.09 5.25
2804 3416 3.950794 GATCACCTTGCCGCGGTCA 62.951 63.158 28.70 21.98 30.82 4.02
2840 3452 4.087182 TCTCGTACATCCTGTTCTTCCTT 58.913 43.478 0.00 0.00 0.00 3.36
2869 3481 2.171448 GCCGGATATATTGGCCTCTGAT 59.829 50.000 5.05 0.00 43.06 2.90
2870 3482 1.555075 GCCGGATATATTGGCCTCTGA 59.445 52.381 5.05 0.00 43.06 3.27
2871 3483 2.029838 GCCGGATATATTGGCCTCTG 57.970 55.000 5.05 0.00 43.06 3.35
2877 3489 2.485426 CTGCTGTTGCCGGATATATTGG 59.515 50.000 5.05 1.52 38.71 3.16
2878 3490 3.402110 TCTGCTGTTGCCGGATATATTG 58.598 45.455 5.05 0.00 38.71 1.90
2879 3491 3.324846 TCTCTGCTGTTGCCGGATATATT 59.675 43.478 5.05 0.00 38.71 1.28
2881 3493 2.316108 TCTCTGCTGTTGCCGGATATA 58.684 47.619 5.05 0.00 38.71 0.86
2882 3494 1.123077 TCTCTGCTGTTGCCGGATAT 58.877 50.000 5.05 0.00 38.71 1.63
2883 3495 1.123077 ATCTCTGCTGTTGCCGGATA 58.877 50.000 5.05 0.00 38.71 2.59
2888 3500 3.930634 AAGAAAATCTCTGCTGTTGCC 57.069 42.857 0.00 0.00 38.71 4.52
2895 3510 4.259610 CGACGAGCTAAAGAAAATCTCTGC 60.260 45.833 0.00 0.00 33.37 4.26
2929 3544 1.068434 ACCTGCAACAAATCAAACCCG 59.932 47.619 0.00 0.00 0.00 5.28
2932 3551 2.794350 CCGAACCTGCAACAAATCAAAC 59.206 45.455 0.00 0.00 0.00 2.93
2934 3553 1.339610 CCCGAACCTGCAACAAATCAA 59.660 47.619 0.00 0.00 0.00 2.57
2942 3561 1.600636 CTGCTTCCCGAACCTGCAA 60.601 57.895 0.00 0.00 33.07 4.08
3033 3652 4.063689 CGGTCCTCGAAATCTACTAGCTA 58.936 47.826 0.00 0.00 42.43 3.32
3065 3684 0.037232 GTCCACGGAGACCAAGAAGG 60.037 60.000 0.00 0.00 45.67 3.46
3066 3685 0.969894 AGTCCACGGAGACCAAGAAG 59.030 55.000 3.71 0.00 37.49 2.85
3067 3686 0.679505 CAGTCCACGGAGACCAAGAA 59.320 55.000 3.71 0.00 37.49 2.52
3110 3729 1.226211 CACCCACGCTACGTACTCG 60.226 63.158 10.00 10.00 38.32 4.18
3111 3730 1.515736 GCACCCACGCTACGTACTC 60.516 63.158 0.00 0.00 38.32 2.59
3112 3731 2.570181 GCACCCACGCTACGTACT 59.430 61.111 0.00 0.00 38.32 2.73
3113 3732 2.877582 CGCACCCACGCTACGTAC 60.878 66.667 0.00 0.00 38.32 3.67
3533 4965 1.372997 CGTCTGGTGACTTCGTGGG 60.373 63.158 0.00 0.00 40.86 4.61
3558 4990 1.356938 GAGAAATTCCCGTCGACCAC 58.643 55.000 10.58 0.00 0.00 4.16
3560 4992 3.061093 GGAGAAATTCCCGTCGACC 57.939 57.895 10.58 0.00 40.37 4.79
3569 5001 2.496899 TGCAGTGGGAGGAGAAATTC 57.503 50.000 0.00 0.00 0.00 2.17
3587 5019 3.770263 ATCTTTGTGCCGATGTTCATG 57.230 42.857 0.00 0.00 0.00 3.07
3589 5021 2.884012 ACAATCTTTGTGCCGATGTTCA 59.116 40.909 0.00 0.00 43.48 3.18
3618 5050 3.609175 GCACAGTGCTCGCATTTTCTTAA 60.609 43.478 18.92 0.00 40.96 1.85
3621 5053 0.239347 GCACAGTGCTCGCATTTTCT 59.761 50.000 18.92 0.00 40.96 2.52
3646 5079 2.637872 TCCACCAGGGTTCAAGTTCTAG 59.362 50.000 0.00 0.00 38.11 2.43
3650 5083 1.133792 CAGTCCACCAGGGTTCAAGTT 60.134 52.381 0.00 0.00 38.11 2.66
3696 5129 2.270091 CGAAGCGAGCGTAACTCAG 58.730 57.895 0.00 0.00 46.63 3.35
3752 5185 7.064016 TGTTTCAAACAATCTGGTTACTTTTGC 59.936 33.333 0.00 0.00 38.72 3.68
3826 5276 1.702699 TCCCTCCCCACTCTACCTTA 58.297 55.000 0.00 0.00 0.00 2.69
3836 5286 0.253583 TGAACATCCATCCCTCCCCA 60.254 55.000 0.00 0.00 0.00 4.96
3837 5287 1.152649 ATGAACATCCATCCCTCCCC 58.847 55.000 0.00 0.00 0.00 4.81
3840 5290 3.875369 GCCCATATGAACATCCATCCCTC 60.875 52.174 3.65 0.00 0.00 4.30
3845 5295 4.999469 TGTAGCCCATATGAACATCCAT 57.001 40.909 3.65 0.00 0.00 3.41
3849 5299 7.321717 AGTTCTATGTAGCCCATATGAACAT 57.678 36.000 21.62 10.42 41.09 2.71
3856 5306 5.397447 CCCAACAAGTTCTATGTAGCCCATA 60.397 44.000 0.00 0.00 34.86 2.74
3863 5313 3.007074 TGCGACCCAACAAGTTCTATGTA 59.993 43.478 0.00 0.00 0.00 2.29
3871 5321 1.724582 GCTTGTGCGACCCAACAAGT 61.725 55.000 14.88 0.00 40.96 3.16
3884 5335 0.532115 GGTTGGCCCATTAGCTTGTG 59.468 55.000 0.00 0.00 0.00 3.33
3943 5394 7.119116 GTGTCTTGTTTTGGACTGGAAATTTTT 59.881 33.333 0.00 0.00 34.01 1.94
3944 5395 6.593770 GTGTCTTGTTTTGGACTGGAAATTTT 59.406 34.615 0.00 0.00 34.01 1.82
3945 5396 6.106003 GTGTCTTGTTTTGGACTGGAAATTT 58.894 36.000 0.00 0.00 34.01 1.82
3946 5397 5.186797 TGTGTCTTGTTTTGGACTGGAAATT 59.813 36.000 0.00 0.00 34.01 1.82
3947 5398 4.709397 TGTGTCTTGTTTTGGACTGGAAAT 59.291 37.500 0.00 0.00 34.01 2.17
3948 5399 4.082845 TGTGTCTTGTTTTGGACTGGAAA 58.917 39.130 0.00 0.00 34.01 3.13
3949 5400 3.691575 TGTGTCTTGTTTTGGACTGGAA 58.308 40.909 0.00 0.00 34.01 3.53
3950 5401 3.358111 TGTGTCTTGTTTTGGACTGGA 57.642 42.857 0.00 0.00 34.01 3.86
3951 5402 3.631686 TGATGTGTCTTGTTTTGGACTGG 59.368 43.478 0.00 0.00 34.01 4.00
3952 5403 4.096231 TGTGATGTGTCTTGTTTTGGACTG 59.904 41.667 0.00 0.00 34.01 3.51
3953 5404 4.096382 GTGTGATGTGTCTTGTTTTGGACT 59.904 41.667 0.00 0.00 34.01 3.85
3954 5405 4.142491 TGTGTGATGTGTCTTGTTTTGGAC 60.142 41.667 0.00 0.00 0.00 4.02
3955 5406 4.013050 TGTGTGATGTGTCTTGTTTTGGA 58.987 39.130 0.00 0.00 0.00 3.53
3956 5407 4.353737 CTGTGTGATGTGTCTTGTTTTGG 58.646 43.478 0.00 0.00 0.00 3.28
3999 5451 2.163010 GACTGTTGGTGATGCTTCATGG 59.837 50.000 5.49 0.00 33.56 3.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.