Multiple sequence alignment - TraesCS2B01G140000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G140000 chr2B 100.000 3116 0 0 1 3116 106618548 106621663 0.000000e+00 5755.0
1 TraesCS2B01G140000 chr2B 94.751 1886 66 19 558 2436 106149718 106147859 0.000000e+00 2904.0
2 TraesCS2B01G140000 chr2B 91.971 1370 95 11 864 2227 106153803 106152443 0.000000e+00 1906.0
3 TraesCS2B01G140000 chr2B 89.832 1367 114 12 863 2223 106717738 106719085 0.000000e+00 1731.0
4 TraesCS2B01G140000 chr2B 87.209 1548 151 22 863 2398 106750637 106752149 0.000000e+00 1718.0
5 TraesCS2B01G140000 chr2B 88.674 1395 125 22 864 2252 106469116 106470483 0.000000e+00 1670.0
6 TraesCS2B01G140000 chr2B 92.217 424 23 8 2015 2436 106446926 106447341 2.680000e-165 592.0
7 TraesCS2B01G140000 chr2B 94.101 356 17 3 913 1267 106079324 106078972 3.540000e-149 538.0
8 TraesCS2B01G140000 chr2D 93.457 2155 114 17 1 2149 70510599 70512732 0.000000e+00 3173.0
9 TraesCS2B01G140000 chr2D 89.707 1399 108 23 864 2248 70383184 70384560 0.000000e+00 1753.0
10 TraesCS2B01G140000 chr2D 89.635 1370 114 20 864 2223 70464074 70465425 0.000000e+00 1718.0
11 TraesCS2B01G140000 chr2D 91.517 1002 78 4 1230 2227 69962248 69961250 0.000000e+00 1373.0
12 TraesCS2B01G140000 chr2D 90.296 371 26 6 864 1233 69962965 69962604 7.820000e-131 477.0
13 TraesCS2B01G140000 chr5B 82.305 243 29 8 2477 2714 511616486 511616719 6.820000e-47 198.0
14 TraesCS2B01G140000 chr5B 86.905 168 17 4 2541 2705 192352993 192352828 1.910000e-42 183.0
15 TraesCS2B01G140000 chr6D 91.852 135 5 4 2983 3116 291693364 291693235 1.910000e-42 183.0
16 TraesCS2B01G140000 chr6B 92.241 116 7 2 3002 3116 544732495 544732381 2.490000e-36 163.0
17 TraesCS2B01G140000 chr6A 87.857 140 14 3 2977 3114 78037748 78037610 8.940000e-36 161.0
18 TraesCS2B01G140000 chr6A 85.577 104 11 4 3013 3114 77903451 77903350 4.250000e-19 106.0
19 TraesCS2B01G140000 chr1D 79.253 241 42 6 2476 2712 363805230 363805466 8.940000e-36 161.0
20 TraesCS2B01G140000 chr1D 87.619 105 6 6 2991 3093 45103604 45103703 7.060000e-22 115.0
21 TraesCS2B01G140000 chr5D 91.228 114 7 3 3005 3116 450087758 450087870 5.380000e-33 152.0
22 TraesCS2B01G140000 chr3D 91.398 93 8 0 771 863 299727676 299727768 9.070000e-26 128.0
23 TraesCS2B01G140000 chr7B 87.850 107 10 3 3011 3116 484901140 484901244 4.220000e-24 122.0
24 TraesCS2B01G140000 chr7B 84.536 97 12 3 2515 2610 63564937 63564843 3.310000e-15 93.5
25 TraesCS2B01G140000 chr7B 82.716 81 11 3 28 107 746623414 746623492 5.580000e-08 69.4
26 TraesCS2B01G140000 chr5A 88.095 84 10 0 3030 3113 585150297 585150214 1.980000e-17 100.0
27 TraesCS2B01G140000 chr7A 83.810 105 15 2 662 766 636627387 636627489 7.110000e-17 99.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G140000 chr2B 106618548 106621663 3115 False 5755 5755 100.0000 1 3116 1 chr2B.!!$F3 3115
1 TraesCS2B01G140000 chr2B 106147859 106153803 5944 True 2405 2904 93.3610 558 2436 2 chr2B.!!$R2 1878
2 TraesCS2B01G140000 chr2B 106717738 106719085 1347 False 1731 1731 89.8320 863 2223 1 chr2B.!!$F4 1360
3 TraesCS2B01G140000 chr2B 106750637 106752149 1512 False 1718 1718 87.2090 863 2398 1 chr2B.!!$F5 1535
4 TraesCS2B01G140000 chr2B 106469116 106470483 1367 False 1670 1670 88.6740 864 2252 1 chr2B.!!$F2 1388
5 TraesCS2B01G140000 chr2D 70510599 70512732 2133 False 3173 3173 93.4570 1 2149 1 chr2D.!!$F3 2148
6 TraesCS2B01G140000 chr2D 70383184 70384560 1376 False 1753 1753 89.7070 864 2248 1 chr2D.!!$F1 1384
7 TraesCS2B01G140000 chr2D 70464074 70465425 1351 False 1718 1718 89.6350 864 2223 1 chr2D.!!$F2 1359
8 TraesCS2B01G140000 chr2D 69961250 69962965 1715 True 925 1373 90.9065 864 2227 2 chr2D.!!$R1 1363


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
850 854 0.321653 ATCTGGTTCTGACGTTGGGC 60.322 55.0 0.0 0.0 0.0 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2484 7256 0.031721 GGAATAGTACGGCCGGACTG 59.968 60.0 45.93 13.56 40.02 3.51 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 1.497991 CGTGTCAACGGTGAATCTGT 58.502 50.000 3.77 0.00 46.25 3.41
90 91 1.617850 GACAACCCCAATTGCATGTCA 59.382 47.619 18.28 0.00 37.65 3.58
96 97 1.404986 CCCAATTGCATGTCAAGGCTG 60.405 52.381 0.00 5.91 38.22 4.85
116 117 2.034053 TGGACTTGCAACCGATGAAAAC 59.966 45.455 0.00 0.00 0.00 2.43
119 120 3.641648 ACTTGCAACCGATGAAAACATG 58.358 40.909 0.00 0.00 0.00 3.21
131 132 7.040892 ACCGATGAAAACATGATTATGAGGATG 60.041 37.037 4.20 0.00 37.73 3.51
145 146 4.705110 TGAGGATGAGGAGACAAAACAA 57.295 40.909 0.00 0.00 0.00 2.83
150 151 5.006386 GGATGAGGAGACAAAACAATCACT 58.994 41.667 0.00 0.00 0.00 3.41
151 152 6.013379 AGGATGAGGAGACAAAACAATCACTA 60.013 38.462 0.00 0.00 0.00 2.74
165 166 3.827008 ATCACTACATCGTCATTGCCT 57.173 42.857 0.00 0.00 0.00 4.75
171 172 0.742505 CATCGTCATTGCCTGCCATT 59.257 50.000 0.00 0.00 0.00 3.16
231 233 2.760374 AGCAAAGATAGTCATAGCGCC 58.240 47.619 2.29 0.00 0.00 6.53
235 237 1.179174 AGATAGTCATAGCGCCGCCA 61.179 55.000 4.98 0.00 0.00 5.69
346 350 9.920133 AAAAAGGCAACAAACAAATAAAACATT 57.080 22.222 0.00 0.00 41.41 2.71
428 432 9.289303 GATACAAATCTTGCATCGTTTAATTGT 57.711 29.630 0.00 0.00 0.00 2.71
485 489 8.950961 CAATCTCGATGTGCTTTTGTAAATATG 58.049 33.333 0.00 0.00 0.00 1.78
556 560 2.322081 CGTAACCTGCAACCCACGG 61.322 63.158 0.00 0.00 0.00 4.94
590 594 3.181169 GACACAACGCAGCCCACAC 62.181 63.158 0.00 0.00 0.00 3.82
592 596 4.849310 ACAACGCAGCCCACACGT 62.849 61.111 0.00 0.00 42.81 4.49
616 620 4.235762 AGACAACACGGCCGCACT 62.236 61.111 28.58 12.55 0.00 4.40
633 637 4.047822 CGCACTATGGCAAAACAGAAAAA 58.952 39.130 0.00 0.00 0.00 1.94
637 641 6.704819 CACTATGGCAAAACAGAAAAACAAC 58.295 36.000 0.00 0.00 0.00 3.32
642 646 4.387559 GGCAAAACAGAAAAACAACTCGTT 59.612 37.500 0.00 0.00 40.50 3.85
731 735 4.246458 GTGGTGAAGGACTTAGATGTGAC 58.754 47.826 0.00 0.00 0.00 3.67
850 854 0.321653 ATCTGGTTCTGACGTTGGGC 60.322 55.000 0.00 0.00 0.00 5.36
921 927 2.754552 AGGCCTGTGTTAATACGTACGA 59.245 45.455 24.41 6.04 0.00 3.43
939 945 2.962253 GACTCGTATGCGCCTGGC 60.962 66.667 9.11 9.11 43.96 4.85
975 981 2.037902 TCCTCCACATAGCAAAACGACA 59.962 45.455 0.00 0.00 0.00 4.35
1138 1153 1.227380 CGAGGGGATTTCAGGAGCG 60.227 63.158 0.00 0.00 0.00 5.03
1165 1180 3.367743 CGGTGAACCTCGTCCCGA 61.368 66.667 0.00 0.00 41.08 5.14
1266 1644 4.559300 GCATTGCTTCAACATGTGGTAAGT 60.559 41.667 0.00 0.00 0.00 2.24
1368 1746 4.459089 GAGGGCCACTCGAGCACC 62.459 72.222 13.61 11.38 36.29 5.01
1461 1840 1.291272 GTACGAGACGGCCACCTTT 59.709 57.895 2.24 0.00 0.00 3.11
1533 1912 1.665679 CACAACAGCGTCAACAAGAGT 59.334 47.619 0.00 0.00 0.00 3.24
1740 2119 1.186917 TCGTGTCCAACATACCCCGT 61.187 55.000 0.00 0.00 0.00 5.28
1977 2363 2.350197 CGAGACTAACGACGTCCTGTTT 60.350 50.000 10.58 0.89 31.83 2.83
1980 2366 1.068127 ACTAACGACGTCCTGTTTGCT 59.932 47.619 10.58 0.00 0.00 3.91
1995 2381 3.357079 GCTGAGGTTGGGTGCACG 61.357 66.667 11.45 0.00 0.00 5.34
2016 2402 3.402681 CCGGGGTCAGACATGGCT 61.403 66.667 0.00 0.00 0.00 4.75
2154 2545 2.097038 CGAGTAGCTGGCTGCACAC 61.097 63.158 18.84 14.68 45.94 3.82
2155 2546 1.743252 GAGTAGCTGGCTGCACACC 60.743 63.158 18.84 6.52 45.94 4.16
2213 2606 5.354234 AGCTTACACTCATTTTACATTCCGG 59.646 40.000 0.00 0.00 0.00 5.14
2214 2607 5.123344 GCTTACACTCATTTTACATTCCGGT 59.877 40.000 0.00 0.00 0.00 5.28
2216 2609 4.906618 ACACTCATTTTACATTCCGGTCT 58.093 39.130 0.00 0.00 0.00 3.85
2217 2610 6.045072 ACACTCATTTTACATTCCGGTCTA 57.955 37.500 0.00 0.00 0.00 2.59
2218 2611 6.106673 ACACTCATTTTACATTCCGGTCTAG 58.893 40.000 0.00 0.00 0.00 2.43
2219 2612 6.070995 ACACTCATTTTACATTCCGGTCTAGA 60.071 38.462 0.00 0.00 0.00 2.43
2220 2613 6.477033 CACTCATTTTACATTCCGGTCTAGAG 59.523 42.308 0.00 0.00 0.00 2.43
2331 7102 7.993183 ACTCTCTCAGTTCCAAATTTACTCAAA 59.007 33.333 0.00 0.00 26.56 2.69
2467 7239 9.953697 TTTTTGTGCGAGTATACACTTATTTTT 57.046 25.926 5.50 0.00 37.68 1.94
2491 7263 8.726870 TTTTATCCTAAAGAAATACAGTCCGG 57.273 34.615 0.00 0.00 0.00 5.14
2492 7264 4.133013 TCCTAAAGAAATACAGTCCGGC 57.867 45.455 0.00 0.00 0.00 6.13
2493 7265 3.118519 TCCTAAAGAAATACAGTCCGGCC 60.119 47.826 0.00 0.00 0.00 6.13
2494 7266 1.734163 AAAGAAATACAGTCCGGCCG 58.266 50.000 21.04 21.04 0.00 6.13
2495 7267 0.611714 AAGAAATACAGTCCGGCCGT 59.388 50.000 26.12 7.53 0.00 5.68
2496 7268 1.477553 AGAAATACAGTCCGGCCGTA 58.522 50.000 26.12 4.86 0.00 4.02
2497 7269 1.135721 AGAAATACAGTCCGGCCGTAC 59.864 52.381 26.12 20.12 0.00 3.67
2498 7270 1.135721 GAAATACAGTCCGGCCGTACT 59.864 52.381 26.12 22.47 0.00 2.73
2499 7271 2.057137 AATACAGTCCGGCCGTACTA 57.943 50.000 23.93 9.61 0.00 1.82
2500 7272 2.283145 ATACAGTCCGGCCGTACTAT 57.717 50.000 23.93 15.73 0.00 2.12
2501 7273 2.057137 TACAGTCCGGCCGTACTATT 57.943 50.000 23.93 15.42 0.00 1.73
2502 7274 0.743097 ACAGTCCGGCCGTACTATTC 59.257 55.000 23.93 5.28 0.00 1.75
2503 7275 0.031721 CAGTCCGGCCGTACTATTCC 59.968 60.000 23.93 1.40 0.00 3.01
2504 7276 0.106318 AGTCCGGCCGTACTATTCCT 60.106 55.000 23.13 0.00 0.00 3.36
2505 7277 0.749049 GTCCGGCCGTACTATTCCTT 59.251 55.000 26.12 0.00 0.00 3.36
2506 7278 1.035139 TCCGGCCGTACTATTCCTTC 58.965 55.000 26.12 0.00 0.00 3.46
2507 7279 0.748450 CCGGCCGTACTATTCCTTCA 59.252 55.000 26.12 0.00 0.00 3.02
2508 7280 1.137479 CCGGCCGTACTATTCCTTCAA 59.863 52.381 26.12 0.00 0.00 2.69
2509 7281 2.419021 CCGGCCGTACTATTCCTTCAAA 60.419 50.000 26.12 0.00 0.00 2.69
2510 7282 3.463944 CGGCCGTACTATTCCTTCAAAT 58.536 45.455 19.50 0.00 0.00 2.32
2511 7283 4.501915 CCGGCCGTACTATTCCTTCAAATA 60.502 45.833 26.12 0.00 0.00 1.40
2512 7284 4.684703 CGGCCGTACTATTCCTTCAAATAG 59.315 45.833 19.50 2.85 42.46 1.73
2514 7286 5.465724 GGCCGTACTATTCCTTCAAATAGTG 59.534 44.000 15.92 4.66 46.72 2.74
2515 7287 6.047231 GCCGTACTATTCCTTCAAATAGTGT 58.953 40.000 15.92 0.00 46.72 3.55
2516 7288 6.537660 GCCGTACTATTCCTTCAAATAGTGTT 59.462 38.462 15.92 0.00 46.72 3.32
2517 7289 7.065443 GCCGTACTATTCCTTCAAATAGTGTTT 59.935 37.037 15.92 0.00 46.72 2.83
2518 7290 8.943002 CCGTACTATTCCTTCAAATAGTGTTTT 58.057 33.333 15.92 0.00 46.72 2.43
2561 7333 2.476126 TTTTTGCCCAGAATGCCATG 57.524 45.000 0.00 0.00 31.97 3.66
2562 7334 0.614294 TTTTGCCCAGAATGCCATGG 59.386 50.000 7.63 7.63 36.27 3.66
2566 7338 4.770540 CCAGAATGCCATGGGTGT 57.229 55.556 15.13 0.00 32.63 4.16
2567 7339 2.496942 CCAGAATGCCATGGGTGTC 58.503 57.895 15.13 0.00 32.63 3.67
2568 7340 0.323633 CCAGAATGCCATGGGTGTCA 60.324 55.000 15.13 2.64 32.63 3.58
2569 7341 1.687054 CCAGAATGCCATGGGTGTCAT 60.687 52.381 15.13 5.25 32.55 3.06
2570 7342 2.104967 CAGAATGCCATGGGTGTCATT 58.895 47.619 15.13 14.04 32.92 2.57
2571 7343 2.498481 CAGAATGCCATGGGTGTCATTT 59.502 45.455 15.13 3.41 32.92 2.32
2572 7344 2.762327 AGAATGCCATGGGTGTCATTTC 59.238 45.455 15.13 8.50 32.92 2.17
2573 7345 2.537633 ATGCCATGGGTGTCATTTCT 57.462 45.000 15.13 0.00 32.92 2.52
2574 7346 2.307496 TGCCATGGGTGTCATTTCTT 57.693 45.000 15.13 0.00 32.92 2.52
2575 7347 2.607499 TGCCATGGGTGTCATTTCTTT 58.393 42.857 15.13 0.00 32.92 2.52
2576 7348 2.299582 TGCCATGGGTGTCATTTCTTTG 59.700 45.455 15.13 0.00 32.92 2.77
2577 7349 2.299867 GCCATGGGTGTCATTTCTTTGT 59.700 45.455 15.13 0.00 32.92 2.83
2578 7350 3.614870 GCCATGGGTGTCATTTCTTTGTC 60.615 47.826 15.13 0.00 32.92 3.18
2579 7351 3.573538 CCATGGGTGTCATTTCTTTGTCA 59.426 43.478 2.85 0.00 32.92 3.58
2580 7352 4.039004 CCATGGGTGTCATTTCTTTGTCAA 59.961 41.667 2.85 0.00 32.92 3.18
2581 7353 5.453057 CCATGGGTGTCATTTCTTTGTCAAA 60.453 40.000 2.85 0.00 32.92 2.69
2582 7354 5.004922 TGGGTGTCATTTCTTTGTCAAAC 57.995 39.130 0.00 0.00 0.00 2.93
2583 7355 4.709397 TGGGTGTCATTTCTTTGTCAAACT 59.291 37.500 0.00 0.00 0.00 2.66
2584 7356 5.186797 TGGGTGTCATTTCTTTGTCAAACTT 59.813 36.000 0.00 0.00 0.00 2.66
2585 7357 5.748630 GGGTGTCATTTCTTTGTCAAACTTC 59.251 40.000 0.00 0.00 0.00 3.01
2586 7358 6.329496 GGTGTCATTTCTTTGTCAAACTTCA 58.671 36.000 0.00 0.00 0.00 3.02
2587 7359 6.980397 GGTGTCATTTCTTTGTCAAACTTCAT 59.020 34.615 0.00 0.00 0.00 2.57
2588 7360 8.134895 GGTGTCATTTCTTTGTCAAACTTCATA 58.865 33.333 0.00 0.00 0.00 2.15
2589 7361 9.683069 GTGTCATTTCTTTGTCAAACTTCATAT 57.317 29.630 0.00 0.00 0.00 1.78
2592 7364 9.611284 TCATTTCTTTGTCAAACTTCATATTCG 57.389 29.630 0.00 0.00 0.00 3.34
2593 7365 9.611284 CATTTCTTTGTCAAACTTCATATTCGA 57.389 29.630 0.00 0.00 0.00 3.71
2594 7366 9.831737 ATTTCTTTGTCAAACTTCATATTCGAG 57.168 29.630 0.00 0.00 0.00 4.04
2595 7367 7.962964 TCTTTGTCAAACTTCATATTCGAGT 57.037 32.000 0.00 0.00 0.00 4.18
2596 7368 9.483916 TTCTTTGTCAAACTTCATATTCGAGTA 57.516 29.630 0.00 0.00 0.00 2.59
2597 7369 9.140286 TCTTTGTCAAACTTCATATTCGAGTAG 57.860 33.333 0.00 0.00 0.00 2.57
2598 7370 9.140286 CTTTGTCAAACTTCATATTCGAGTAGA 57.860 33.333 0.00 0.00 0.00 2.59
2599 7371 9.483916 TTTGTCAAACTTCATATTCGAGTAGAA 57.516 29.630 0.00 0.00 43.93 2.10
2684 7456 8.755696 TCAAATTTACAATTCATAACAGGTGC 57.244 30.769 0.00 0.00 0.00 5.01
2685 7457 8.363390 TCAAATTTACAATTCATAACAGGTGCA 58.637 29.630 0.00 0.00 0.00 4.57
2686 7458 9.153721 CAAATTTACAATTCATAACAGGTGCAT 57.846 29.630 0.00 0.00 0.00 3.96
2687 7459 8.706492 AATTTACAATTCATAACAGGTGCATG 57.294 30.769 0.00 0.00 0.00 4.06
2688 7460 6.832520 TTACAATTCATAACAGGTGCATGT 57.167 33.333 0.00 0.00 33.96 3.21
2689 7461 5.063180 ACAATTCATAACAGGTGCATGTG 57.937 39.130 0.00 0.00 32.52 3.21
2690 7462 4.082081 ACAATTCATAACAGGTGCATGTGG 60.082 41.667 0.00 0.00 32.52 4.17
2691 7463 3.431673 TTCATAACAGGTGCATGTGGA 57.568 42.857 0.00 0.00 32.52 4.02
2692 7464 3.431673 TCATAACAGGTGCATGTGGAA 57.568 42.857 0.00 0.00 32.52 3.53
2693 7465 3.081061 TCATAACAGGTGCATGTGGAAC 58.919 45.455 0.00 0.00 32.52 3.62
2694 7466 1.904287 TAACAGGTGCATGTGGAACC 58.096 50.000 0.00 0.00 34.36 3.62
2695 7467 0.106268 AACAGGTGCATGTGGAACCA 60.106 50.000 10.35 0.00 36.37 3.67
2696 7468 0.112995 ACAGGTGCATGTGGAACCAT 59.887 50.000 10.35 0.00 36.37 3.55
2697 7469 0.528924 CAGGTGCATGTGGAACCATG 59.471 55.000 10.35 0.00 44.07 3.66
2698 7470 0.112995 AGGTGCATGTGGAACCATGT 59.887 50.000 10.35 0.00 43.33 3.21
2699 7471 0.527565 GGTGCATGTGGAACCATGTC 59.472 55.000 0.00 0.00 43.33 3.06
2700 7472 0.527565 GTGCATGTGGAACCATGTCC 59.472 55.000 0.00 0.00 43.33 4.02
2701 7473 0.611618 TGCATGTGGAACCATGTCCC 60.612 55.000 0.00 0.00 43.33 4.46
2702 7474 0.611618 GCATGTGGAACCATGTCCCA 60.612 55.000 0.00 0.00 43.33 4.37
2703 7475 1.921982 CATGTGGAACCATGTCCCAA 58.078 50.000 0.00 0.00 37.91 4.12
2704 7476 2.246469 CATGTGGAACCATGTCCCAAA 58.754 47.619 0.00 0.00 37.91 3.28
2705 7477 2.461300 TGTGGAACCATGTCCCAAAA 57.539 45.000 0.00 0.00 36.80 2.44
2706 7478 2.752030 TGTGGAACCATGTCCCAAAAA 58.248 42.857 0.00 0.00 36.80 1.94
2707 7479 3.312890 TGTGGAACCATGTCCCAAAAAT 58.687 40.909 0.00 0.00 36.80 1.82
2708 7480 3.713764 TGTGGAACCATGTCCCAAAAATT 59.286 39.130 0.00 0.00 36.80 1.82
2709 7481 4.202305 TGTGGAACCATGTCCCAAAAATTC 60.202 41.667 0.00 0.00 36.80 2.17
2710 7482 3.326297 TGGAACCATGTCCCAAAAATTCC 59.674 43.478 0.15 0.00 36.80 3.01
2711 7483 3.582647 GGAACCATGTCCCAAAAATTCCT 59.417 43.478 0.00 0.00 33.14 3.36
2712 7484 4.563374 GGAACCATGTCCCAAAAATTCCTG 60.563 45.833 0.00 0.00 33.14 3.86
2713 7485 3.586429 ACCATGTCCCAAAAATTCCTGT 58.414 40.909 0.00 0.00 0.00 4.00
2714 7486 3.578282 ACCATGTCCCAAAAATTCCTGTC 59.422 43.478 0.00 0.00 0.00 3.51
2715 7487 3.834231 CCATGTCCCAAAAATTCCTGTCT 59.166 43.478 0.00 0.00 0.00 3.41
2716 7488 4.322198 CCATGTCCCAAAAATTCCTGTCTG 60.322 45.833 0.00 0.00 0.00 3.51
2717 7489 2.627699 TGTCCCAAAAATTCCTGTCTGC 59.372 45.455 0.00 0.00 0.00 4.26
2718 7490 2.893489 GTCCCAAAAATTCCTGTCTGCT 59.107 45.455 0.00 0.00 0.00 4.24
2719 7491 2.892852 TCCCAAAAATTCCTGTCTGCTG 59.107 45.455 0.00 0.00 0.00 4.41
2720 7492 2.028748 CCCAAAAATTCCTGTCTGCTGG 60.029 50.000 0.00 0.00 35.32 4.85
2721 7493 2.892852 CCAAAAATTCCTGTCTGCTGGA 59.107 45.455 0.00 0.00 40.35 3.86
2722 7494 3.057033 CCAAAAATTCCTGTCTGCTGGAG 60.057 47.826 0.00 0.00 42.46 3.86
2723 7495 2.503895 AAATTCCTGTCTGCTGGAGG 57.496 50.000 0.00 3.95 42.46 4.30
2724 7496 1.366319 AATTCCTGTCTGCTGGAGGT 58.634 50.000 0.00 0.00 42.46 3.85
2725 7497 2.254152 ATTCCTGTCTGCTGGAGGTA 57.746 50.000 0.00 1.93 42.46 3.08
2726 7498 1.267121 TTCCTGTCTGCTGGAGGTAC 58.733 55.000 0.00 0.00 42.46 3.34
2727 7499 0.114364 TCCTGTCTGCTGGAGGTACA 59.886 55.000 0.00 0.00 37.74 2.90
2728 7500 1.198713 CCTGTCTGCTGGAGGTACAT 58.801 55.000 0.00 0.00 35.96 2.29
2729 7501 1.556911 CCTGTCTGCTGGAGGTACATT 59.443 52.381 0.00 0.00 35.96 2.71
2730 7502 2.766263 CCTGTCTGCTGGAGGTACATTA 59.234 50.000 0.00 0.00 35.96 1.90
2731 7503 3.197766 CCTGTCTGCTGGAGGTACATTAA 59.802 47.826 0.00 0.00 35.96 1.40
2732 7504 4.437239 CTGTCTGCTGGAGGTACATTAAG 58.563 47.826 0.00 0.00 0.00 1.85
2733 7505 4.093743 TGTCTGCTGGAGGTACATTAAGA 58.906 43.478 0.00 0.00 0.00 2.10
2734 7506 4.081642 TGTCTGCTGGAGGTACATTAAGAC 60.082 45.833 0.00 0.00 0.00 3.01
2735 7507 3.130516 TCTGCTGGAGGTACATTAAGACG 59.869 47.826 0.00 0.00 0.00 4.18
2736 7508 2.829720 TGCTGGAGGTACATTAAGACGT 59.170 45.455 0.00 0.00 0.00 4.34
2737 7509 4.018490 TGCTGGAGGTACATTAAGACGTA 58.982 43.478 0.00 0.00 0.00 3.57
2738 7510 4.647853 TGCTGGAGGTACATTAAGACGTAT 59.352 41.667 0.00 0.00 0.00 3.06
2739 7511 5.829391 TGCTGGAGGTACATTAAGACGTATA 59.171 40.000 0.00 0.00 0.00 1.47
2740 7512 6.321945 TGCTGGAGGTACATTAAGACGTATAA 59.678 38.462 0.00 0.00 0.00 0.98
2741 7513 7.014905 TGCTGGAGGTACATTAAGACGTATAAT 59.985 37.037 0.00 0.00 0.00 1.28
2742 7514 7.541437 GCTGGAGGTACATTAAGACGTATAATC 59.459 40.741 0.00 0.00 0.00 1.75
2743 7515 8.467963 TGGAGGTACATTAAGACGTATAATCA 57.532 34.615 0.00 0.00 0.00 2.57
2744 7516 8.355169 TGGAGGTACATTAAGACGTATAATCAC 58.645 37.037 0.00 0.00 0.00 3.06
2745 7517 7.811713 GGAGGTACATTAAGACGTATAATCACC 59.188 40.741 16.84 16.84 31.22 4.02
2746 7518 8.474710 AGGTACATTAAGACGTATAATCACCT 57.525 34.615 19.13 19.13 33.96 4.00
2747 7519 8.921205 AGGTACATTAAGACGTATAATCACCTT 58.079 33.333 19.13 8.12 34.54 3.50
2748 7520 9.189723 GGTACATTAAGACGTATAATCACCTTC 57.810 37.037 17.06 0.00 29.86 3.46
2749 7521 9.189723 GTACATTAAGACGTATAATCACCTTCC 57.810 37.037 0.00 0.00 0.00 3.46
2750 7522 7.788026 ACATTAAGACGTATAATCACCTTCCA 58.212 34.615 0.00 0.00 0.00 3.53
2751 7523 8.262227 ACATTAAGACGTATAATCACCTTCCAA 58.738 33.333 0.00 0.00 0.00 3.53
2752 7524 9.104965 CATTAAGACGTATAATCACCTTCCAAA 57.895 33.333 0.00 0.00 0.00 3.28
2753 7525 6.980051 AAGACGTATAATCACCTTCCAAAC 57.020 37.500 0.00 0.00 0.00 2.93
2754 7526 5.107133 AGACGTATAATCACCTTCCAAACG 58.893 41.667 0.00 0.00 0.00 3.60
2755 7527 4.186159 ACGTATAATCACCTTCCAAACGG 58.814 43.478 0.00 0.00 32.47 4.44
2756 7528 4.186159 CGTATAATCACCTTCCAAACGGT 58.814 43.478 0.00 0.00 0.00 4.83
2757 7529 4.269363 CGTATAATCACCTTCCAAACGGTC 59.731 45.833 0.00 0.00 0.00 4.79
2758 7530 2.649531 AATCACCTTCCAAACGGTCA 57.350 45.000 0.00 0.00 0.00 4.02
2759 7531 2.185004 ATCACCTTCCAAACGGTCAG 57.815 50.000 0.00 0.00 0.00 3.51
2760 7532 1.124780 TCACCTTCCAAACGGTCAGA 58.875 50.000 0.00 0.00 0.00 3.27
2761 7533 1.487142 TCACCTTCCAAACGGTCAGAA 59.513 47.619 0.00 0.00 0.00 3.02
2762 7534 2.092861 TCACCTTCCAAACGGTCAGAAA 60.093 45.455 0.00 0.00 0.00 2.52
2763 7535 2.685897 CACCTTCCAAACGGTCAGAAAA 59.314 45.455 0.00 0.00 0.00 2.29
2764 7536 3.129638 CACCTTCCAAACGGTCAGAAAAA 59.870 43.478 0.00 0.00 0.00 1.94
2765 7537 3.380320 ACCTTCCAAACGGTCAGAAAAAG 59.620 43.478 0.00 0.00 0.00 2.27
2766 7538 3.243401 CCTTCCAAACGGTCAGAAAAAGG 60.243 47.826 0.00 0.00 0.00 3.11
2767 7539 3.007473 TCCAAACGGTCAGAAAAAGGT 57.993 42.857 0.00 0.00 0.00 3.50
2768 7540 3.358118 TCCAAACGGTCAGAAAAAGGTT 58.642 40.909 0.00 0.00 0.00 3.50
2769 7541 3.129638 TCCAAACGGTCAGAAAAAGGTTG 59.870 43.478 0.00 0.00 0.00 3.77
2770 7542 3.119280 CCAAACGGTCAGAAAAAGGTTGT 60.119 43.478 0.00 0.00 0.00 3.32
2771 7543 4.096682 CCAAACGGTCAGAAAAAGGTTGTA 59.903 41.667 0.00 0.00 0.00 2.41
2772 7544 5.221165 CCAAACGGTCAGAAAAAGGTTGTAT 60.221 40.000 0.00 0.00 0.00 2.29
2773 7545 6.270064 CAAACGGTCAGAAAAAGGTTGTATT 58.730 36.000 0.00 0.00 0.00 1.89
2774 7546 7.419204 CAAACGGTCAGAAAAAGGTTGTATTA 58.581 34.615 0.00 0.00 0.00 0.98
2775 7547 7.571080 AACGGTCAGAAAAAGGTTGTATTAA 57.429 32.000 0.00 0.00 0.00 1.40
2776 7548 7.754851 ACGGTCAGAAAAAGGTTGTATTAAT 57.245 32.000 0.00 0.00 0.00 1.40
2777 7549 8.851541 ACGGTCAGAAAAAGGTTGTATTAATA 57.148 30.769 0.00 0.00 0.00 0.98
2778 7550 9.457436 ACGGTCAGAAAAAGGTTGTATTAATAT 57.543 29.630 0.00 0.00 0.00 1.28
2779 7551 9.716507 CGGTCAGAAAAAGGTTGTATTAATATG 57.283 33.333 0.00 0.00 0.00 1.78
2782 7554 9.983024 TCAGAAAAAGGTTGTATTAATATGGGA 57.017 29.630 0.00 0.00 0.00 4.37
2784 7556 9.990868 AGAAAAAGGTTGTATTAATATGGGACT 57.009 29.630 0.00 0.00 0.00 3.85
2786 7558 8.446599 AAAAGGTTGTATTAATATGGGACTCG 57.553 34.615 0.00 0.00 0.00 4.18
2787 7559 6.742559 AGGTTGTATTAATATGGGACTCGT 57.257 37.500 0.00 0.00 0.00 4.18
2788 7560 7.844493 AGGTTGTATTAATATGGGACTCGTA 57.156 36.000 0.00 0.00 0.00 3.43
2789 7561 8.431910 AGGTTGTATTAATATGGGACTCGTAT 57.568 34.615 0.00 0.00 0.00 3.06
2790 7562 9.537852 AGGTTGTATTAATATGGGACTCGTATA 57.462 33.333 0.00 0.00 0.00 1.47
2791 7563 9.798994 GGTTGTATTAATATGGGACTCGTATAG 57.201 37.037 0.00 0.00 0.00 1.31
2792 7564 9.798994 GTTGTATTAATATGGGACTCGTATAGG 57.201 37.037 0.00 0.00 0.00 2.57
2793 7565 9.537852 TTGTATTAATATGGGACTCGTATAGGT 57.462 33.333 0.00 0.00 0.00 3.08
2794 7566 8.963725 TGTATTAATATGGGACTCGTATAGGTG 58.036 37.037 0.00 0.00 0.00 4.00
2795 7567 6.845758 TTAATATGGGACTCGTATAGGTGG 57.154 41.667 0.21 0.00 0.00 4.61
2796 7568 4.669866 ATATGGGACTCGTATAGGTGGA 57.330 45.455 0.21 0.00 0.00 4.02
2797 7569 3.544698 ATGGGACTCGTATAGGTGGAT 57.455 47.619 0.21 0.00 0.00 3.41
2798 7570 2.872732 TGGGACTCGTATAGGTGGATC 58.127 52.381 0.21 0.00 0.00 3.36
2799 7571 1.811359 GGGACTCGTATAGGTGGATCG 59.189 57.143 0.21 0.00 0.00 3.69
2800 7572 2.551721 GGGACTCGTATAGGTGGATCGA 60.552 54.545 0.00 0.00 0.00 3.59
2801 7573 3.345414 GGACTCGTATAGGTGGATCGAT 58.655 50.000 0.00 0.00 0.00 3.59
2802 7574 3.757493 GGACTCGTATAGGTGGATCGATT 59.243 47.826 0.00 0.00 0.00 3.34
2803 7575 4.142643 GGACTCGTATAGGTGGATCGATTC 60.143 50.000 0.00 0.00 32.39 2.52
2804 7576 3.757493 ACTCGTATAGGTGGATCGATTCC 59.243 47.826 0.00 4.18 45.69 3.01
2805 7577 4.011023 CTCGTATAGGTGGATCGATTCCT 58.989 47.826 17.38 17.38 45.68 3.36
2806 7578 3.756963 TCGTATAGGTGGATCGATTCCTG 59.243 47.826 20.41 9.44 45.68 3.86
2807 7579 3.673594 CGTATAGGTGGATCGATTCCTGC 60.674 52.174 20.41 12.77 45.68 4.85
2808 7580 1.048601 TAGGTGGATCGATTCCTGCC 58.951 55.000 20.41 17.03 45.68 4.85
2809 7581 0.692419 AGGTGGATCGATTCCTGCCT 60.692 55.000 14.10 15.50 45.68 4.75
2810 7582 0.181350 GGTGGATCGATTCCTGCCTT 59.819 55.000 0.00 0.00 45.68 4.35
2811 7583 1.587547 GTGGATCGATTCCTGCCTTC 58.412 55.000 0.00 0.00 45.68 3.46
2812 7584 0.469917 TGGATCGATTCCTGCCTTCC 59.530 55.000 0.00 0.00 45.68 3.46
2813 7585 0.469917 GGATCGATTCCTGCCTTCCA 59.530 55.000 0.00 0.00 41.78 3.53
2814 7586 1.587547 GATCGATTCCTGCCTTCCAC 58.412 55.000 0.00 0.00 0.00 4.02
2815 7587 0.911769 ATCGATTCCTGCCTTCCACA 59.088 50.000 0.00 0.00 0.00 4.17
2816 7588 0.911769 TCGATTCCTGCCTTCCACAT 59.088 50.000 0.00 0.00 0.00 3.21
2817 7589 2.115427 TCGATTCCTGCCTTCCACATA 58.885 47.619 0.00 0.00 0.00 2.29
2818 7590 2.158957 TCGATTCCTGCCTTCCACATAC 60.159 50.000 0.00 0.00 0.00 2.39
2819 7591 2.576615 GATTCCTGCCTTCCACATACC 58.423 52.381 0.00 0.00 0.00 2.73
2820 7592 1.367346 TTCCTGCCTTCCACATACCA 58.633 50.000 0.00 0.00 0.00 3.25
2821 7593 1.367346 TCCTGCCTTCCACATACCAA 58.633 50.000 0.00 0.00 0.00 3.67
2822 7594 1.707989 TCCTGCCTTCCACATACCAAA 59.292 47.619 0.00 0.00 0.00 3.28
2823 7595 2.094675 CCTGCCTTCCACATACCAAAG 58.905 52.381 0.00 0.00 0.00 2.77
2824 7596 2.555227 CCTGCCTTCCACATACCAAAGT 60.555 50.000 0.00 0.00 0.00 2.66
2825 7597 2.489329 CTGCCTTCCACATACCAAAGTG 59.511 50.000 0.00 0.00 35.56 3.16
2826 7598 2.107378 TGCCTTCCACATACCAAAGTGA 59.893 45.455 0.00 0.00 37.97 3.41
2827 7599 2.488153 GCCTTCCACATACCAAAGTGAC 59.512 50.000 0.00 0.00 37.97 3.67
2828 7600 3.081804 CCTTCCACATACCAAAGTGACC 58.918 50.000 0.00 0.00 37.97 4.02
2829 7601 3.497763 CCTTCCACATACCAAAGTGACCA 60.498 47.826 0.00 0.00 37.97 4.02
2830 7602 3.866703 TCCACATACCAAAGTGACCAA 57.133 42.857 0.00 0.00 37.97 3.67
2831 7603 3.750371 TCCACATACCAAAGTGACCAAG 58.250 45.455 0.00 0.00 37.97 3.61
2832 7604 3.392947 TCCACATACCAAAGTGACCAAGA 59.607 43.478 0.00 0.00 37.97 3.02
2833 7605 4.042809 TCCACATACCAAAGTGACCAAGAT 59.957 41.667 0.00 0.00 37.97 2.40
2834 7606 5.249622 TCCACATACCAAAGTGACCAAGATA 59.750 40.000 0.00 0.00 37.97 1.98
2835 7607 6.069673 TCCACATACCAAAGTGACCAAGATAT 60.070 38.462 0.00 0.00 37.97 1.63
2836 7608 7.126573 TCCACATACCAAAGTGACCAAGATATA 59.873 37.037 0.00 0.00 37.97 0.86
2837 7609 7.939039 CCACATACCAAAGTGACCAAGATATAT 59.061 37.037 0.00 0.00 37.97 0.86
2838 7610 8.777413 CACATACCAAAGTGACCAAGATATATG 58.223 37.037 0.00 0.00 37.97 1.78
2839 7611 8.494433 ACATACCAAAGTGACCAAGATATATGT 58.506 33.333 0.00 0.00 0.00 2.29
2840 7612 8.777413 CATACCAAAGTGACCAAGATATATGTG 58.223 37.037 0.00 0.00 0.00 3.21
2841 7613 6.721318 ACCAAAGTGACCAAGATATATGTGT 58.279 36.000 0.00 0.00 0.00 3.72
2842 7614 7.857456 ACCAAAGTGACCAAGATATATGTGTA 58.143 34.615 0.00 0.00 0.00 2.90
2843 7615 7.769044 ACCAAAGTGACCAAGATATATGTGTAC 59.231 37.037 0.00 0.00 0.00 2.90
2844 7616 7.042725 CCAAAGTGACCAAGATATATGTGTACG 60.043 40.741 0.00 0.00 0.00 3.67
2845 7617 6.954487 AGTGACCAAGATATATGTGTACGA 57.046 37.500 0.00 0.00 0.00 3.43
2846 7618 6.971602 AGTGACCAAGATATATGTGTACGAG 58.028 40.000 0.00 0.00 0.00 4.18
2847 7619 6.771267 AGTGACCAAGATATATGTGTACGAGA 59.229 38.462 0.00 0.00 0.00 4.04
2848 7620 7.284716 AGTGACCAAGATATATGTGTACGAGAA 59.715 37.037 0.00 0.00 0.00 2.87
2849 7621 7.919091 GTGACCAAGATATATGTGTACGAGAAA 59.081 37.037 0.00 0.00 0.00 2.52
2850 7622 8.638873 TGACCAAGATATATGTGTACGAGAAAT 58.361 33.333 0.00 0.00 0.00 2.17
2851 7623 8.818141 ACCAAGATATATGTGTACGAGAAATG 57.182 34.615 0.00 0.00 0.00 2.32
2852 7624 7.872993 ACCAAGATATATGTGTACGAGAAATGG 59.127 37.037 0.00 0.00 0.00 3.16
2853 7625 8.088365 CCAAGATATATGTGTACGAGAAATGGA 58.912 37.037 0.00 0.00 0.00 3.41
2854 7626 9.133627 CAAGATATATGTGTACGAGAAATGGAG 57.866 37.037 0.00 0.00 0.00 3.86
2855 7627 8.410673 AGATATATGTGTACGAGAAATGGAGT 57.589 34.615 0.00 0.00 0.00 3.85
2856 7628 8.300286 AGATATATGTGTACGAGAAATGGAGTG 58.700 37.037 0.00 0.00 0.00 3.51
2857 7629 2.683968 TGTGTACGAGAAATGGAGTGC 58.316 47.619 0.00 0.00 0.00 4.40
2858 7630 2.000447 GTGTACGAGAAATGGAGTGCC 59.000 52.381 0.00 0.00 0.00 5.01
2867 7639 4.624364 TGGAGTGCCACCGTGCTG 62.624 66.667 0.00 0.00 39.92 4.41
2868 7640 4.626081 GGAGTGCCACCGTGCTGT 62.626 66.667 0.00 0.00 0.00 4.40
2869 7641 2.591715 GAGTGCCACCGTGCTGTT 60.592 61.111 0.00 0.00 0.00 3.16
2870 7642 1.301401 GAGTGCCACCGTGCTGTTA 60.301 57.895 0.00 0.00 0.00 2.41
2871 7643 1.291877 GAGTGCCACCGTGCTGTTAG 61.292 60.000 0.00 0.00 0.00 2.34
2872 7644 1.597027 GTGCCACCGTGCTGTTAGT 60.597 57.895 0.00 0.00 0.00 2.24
2873 7645 1.147376 TGCCACCGTGCTGTTAGTT 59.853 52.632 0.00 0.00 0.00 2.24
2874 7646 0.464735 TGCCACCGTGCTGTTAGTTT 60.465 50.000 0.00 0.00 0.00 2.66
2875 7647 0.040425 GCCACCGTGCTGTTAGTTTG 60.040 55.000 0.00 0.00 0.00 2.93
2876 7648 0.591170 CCACCGTGCTGTTAGTTTGG 59.409 55.000 0.00 0.00 0.00 3.28
2877 7649 1.305201 CACCGTGCTGTTAGTTTGGT 58.695 50.000 0.00 0.00 0.00 3.67
2878 7650 1.263217 CACCGTGCTGTTAGTTTGGTC 59.737 52.381 0.00 0.00 0.00 4.02
2879 7651 0.511221 CCGTGCTGTTAGTTTGGTCG 59.489 55.000 0.00 0.00 0.00 4.79
2880 7652 1.214367 CGTGCTGTTAGTTTGGTCGT 58.786 50.000 0.00 0.00 0.00 4.34
2881 7653 1.070843 CGTGCTGTTAGTTTGGTCGTG 60.071 52.381 0.00 0.00 0.00 4.35
2882 7654 0.941542 TGCTGTTAGTTTGGTCGTGC 59.058 50.000 0.00 0.00 0.00 5.34
2883 7655 1.226746 GCTGTTAGTTTGGTCGTGCT 58.773 50.000 0.00 0.00 0.00 4.40
2884 7656 1.194772 GCTGTTAGTTTGGTCGTGCTC 59.805 52.381 0.00 0.00 0.00 4.26
2885 7657 1.455786 CTGTTAGTTTGGTCGTGCTCG 59.544 52.381 0.81 0.81 38.55 5.03
2886 7658 1.202440 TGTTAGTTTGGTCGTGCTCGT 60.202 47.619 8.17 0.00 38.33 4.18
2887 7659 1.191647 GTTAGTTTGGTCGTGCTCGTG 59.808 52.381 8.17 0.00 38.33 4.35
2888 7660 0.942410 TAGTTTGGTCGTGCTCGTGC 60.942 55.000 8.17 1.71 38.33 5.34
2889 7661 2.108157 TTTGGTCGTGCTCGTGCT 59.892 55.556 11.19 0.00 40.48 4.40
2890 7662 2.243957 TTTGGTCGTGCTCGTGCTG 61.244 57.895 11.19 3.62 40.48 4.41
2893 7665 3.771491 GTCGTGCTCGTGCTGCTG 61.771 66.667 11.19 0.00 40.48 4.41
2896 7668 3.786586 GTGCTCGTGCTGCTGCTC 61.787 66.667 17.00 12.09 40.48 4.26
2921 7693 2.483745 CGGCGTTGAGCTCTACGA 59.516 61.111 41.19 11.06 45.29 3.43
2922 7694 1.064296 CGGCGTTGAGCTCTACGAT 59.936 57.895 41.19 0.00 45.29 3.73
2923 7695 0.306840 CGGCGTTGAGCTCTACGATA 59.693 55.000 41.19 9.92 45.29 2.92
2924 7696 1.660614 CGGCGTTGAGCTCTACGATAG 60.661 57.143 41.19 29.28 45.29 2.08
2925 7697 1.400550 GCGTTGAGCTCTACGATAGC 58.599 55.000 41.19 25.73 45.29 2.97
2926 7698 1.664629 CGTTGAGCTCTACGATAGCG 58.335 55.000 36.55 16.52 45.29 4.26
2928 7700 5.418657 GCGTTGAGCTCTACGATAGCGTA 62.419 52.174 41.19 13.24 46.06 4.42
2964 7736 9.488762 TTTATCTTACCTTCTACTCCAAGATGA 57.511 33.333 0.00 0.00 35.15 2.92
2965 7737 9.661954 TTATCTTACCTTCTACTCCAAGATGAT 57.338 33.333 0.00 0.00 35.15 2.45
2966 7738 7.589958 TCTTACCTTCTACTCCAAGATGATC 57.410 40.000 0.00 0.00 0.00 2.92
2967 7739 7.126061 TCTTACCTTCTACTCCAAGATGATCA 58.874 38.462 0.00 0.00 0.00 2.92
2968 7740 7.786943 TCTTACCTTCTACTCCAAGATGATCAT 59.213 37.037 8.25 8.25 0.00 2.45
2969 7741 6.172136 ACCTTCTACTCCAAGATGATCATG 57.828 41.667 14.30 0.00 0.00 3.07
2970 7742 5.664908 ACCTTCTACTCCAAGATGATCATGT 59.335 40.000 14.30 6.15 0.00 3.21
2971 7743 5.990386 CCTTCTACTCCAAGATGATCATGTG 59.010 44.000 14.30 10.71 0.00 3.21
2972 7744 6.407865 CCTTCTACTCCAAGATGATCATGTGT 60.408 42.308 14.30 8.15 0.00 3.72
2973 7745 5.910614 TCTACTCCAAGATGATCATGTGTG 58.089 41.667 14.30 9.95 0.00 3.82
2974 7746 4.564782 ACTCCAAGATGATCATGTGTGT 57.435 40.909 14.30 8.94 0.00 3.72
2975 7747 5.682234 ACTCCAAGATGATCATGTGTGTA 57.318 39.130 14.30 0.00 0.00 2.90
2976 7748 6.244552 ACTCCAAGATGATCATGTGTGTAT 57.755 37.500 14.30 0.00 0.00 2.29
2977 7749 7.365497 ACTCCAAGATGATCATGTGTGTATA 57.635 36.000 14.30 0.00 0.00 1.47
2978 7750 7.971201 ACTCCAAGATGATCATGTGTGTATAT 58.029 34.615 14.30 0.00 0.00 0.86
2979 7751 9.093458 ACTCCAAGATGATCATGTGTGTATATA 57.907 33.333 14.30 0.00 0.00 0.86
3046 7818 7.872163 TGTATGAAAAAGCAAAGCTATTGTG 57.128 32.000 9.40 0.00 38.25 3.33
3047 7819 7.432869 TGTATGAAAAAGCAAAGCTATTGTGT 58.567 30.769 9.40 0.00 38.25 3.72
3048 7820 7.925483 TGTATGAAAAAGCAAAGCTATTGTGTT 59.075 29.630 9.40 3.16 38.25 3.32
3049 7821 7.790823 ATGAAAAAGCAAAGCTATTGTGTTT 57.209 28.000 9.40 7.43 38.25 2.83
3050 7822 7.232945 TGAAAAAGCAAAGCTATTGTGTTTC 57.767 32.000 16.00 16.00 38.25 2.78
3051 7823 7.041107 TGAAAAAGCAAAGCTATTGTGTTTCT 58.959 30.769 19.20 8.25 38.25 2.52
3052 7824 7.222611 TGAAAAAGCAAAGCTATTGTGTTTCTC 59.777 33.333 19.20 13.08 38.25 2.87
3053 7825 6.396829 AAAGCAAAGCTATTGTGTTTCTCT 57.603 33.333 9.40 0.00 38.25 3.10
3054 7826 5.619625 AGCAAAGCTATTGTGTTTCTCTC 57.380 39.130 9.40 0.00 36.99 3.20
3055 7827 5.312079 AGCAAAGCTATTGTGTTTCTCTCT 58.688 37.500 9.40 0.00 36.99 3.10
3056 7828 6.467677 AGCAAAGCTATTGTGTTTCTCTCTA 58.532 36.000 9.40 0.00 36.99 2.43
3057 7829 6.593382 AGCAAAGCTATTGTGTTTCTCTCTAG 59.407 38.462 9.40 0.00 36.99 2.43
3058 7830 6.591834 GCAAAGCTATTGTGTTTCTCTCTAGA 59.408 38.462 9.40 0.00 0.00 2.43
3059 7831 7.201513 GCAAAGCTATTGTGTTTCTCTCTAGAG 60.202 40.741 13.98 13.98 43.36 2.43
3071 7843 5.059134 TCTCTCTAGAGATGGCAATCTGA 57.941 43.478 22.59 10.25 45.48 3.27
3072 7844 5.072055 TCTCTCTAGAGATGGCAATCTGAG 58.928 45.833 22.59 9.33 45.48 3.35
3073 7845 3.573538 TCTCTAGAGATGGCAATCTGAGC 59.426 47.826 18.76 0.00 43.48 4.26
3074 7846 5.534769 TCTCTAGAGATGGCAATCTGAGCC 61.535 50.000 18.76 1.19 43.48 4.70
3083 7855 3.795623 GCAATCTGAGCCACATGATTT 57.204 42.857 0.00 0.00 30.25 2.17
3084 7856 3.444916 GCAATCTGAGCCACATGATTTG 58.555 45.455 0.00 0.00 30.25 2.32
3085 7857 3.444916 CAATCTGAGCCACATGATTTGC 58.555 45.455 0.00 0.00 30.25 3.68
3086 7858 2.502142 TCTGAGCCACATGATTTGCT 57.498 45.000 0.00 0.82 36.62 3.91
3087 7859 2.799017 TCTGAGCCACATGATTTGCTT 58.201 42.857 0.00 0.00 33.41 3.91
3088 7860 2.490509 TCTGAGCCACATGATTTGCTTG 59.509 45.455 0.00 0.00 33.41 4.01
3089 7861 1.546923 TGAGCCACATGATTTGCTTGG 59.453 47.619 0.00 0.00 33.41 3.61
3090 7862 0.899720 AGCCACATGATTTGCTTGGG 59.100 50.000 0.00 0.00 0.00 4.12
3091 7863 0.896923 GCCACATGATTTGCTTGGGA 59.103 50.000 0.00 0.00 0.00 4.37
3092 7864 1.483415 GCCACATGATTTGCTTGGGAT 59.517 47.619 0.00 0.00 0.00 3.85
3093 7865 2.482490 GCCACATGATTTGCTTGGGATC 60.482 50.000 0.00 0.00 0.00 3.36
3094 7866 2.101917 CCACATGATTTGCTTGGGATCC 59.898 50.000 1.92 1.92 0.00 3.36
3095 7867 2.026641 ACATGATTTGCTTGGGATCCG 58.973 47.619 5.45 0.00 0.00 4.18
3096 7868 1.338973 CATGATTTGCTTGGGATCCGG 59.661 52.381 5.45 0.00 0.00 5.14
3097 7869 0.331278 TGATTTGCTTGGGATCCGGT 59.669 50.000 5.45 0.00 0.00 5.28
3098 7870 1.025041 GATTTGCTTGGGATCCGGTC 58.975 55.000 5.45 0.00 0.00 4.79
3108 7880 2.491675 GGATCCGGTCCACTTTCTTT 57.508 50.000 15.65 0.00 46.96 2.52
3109 7881 2.357075 GGATCCGGTCCACTTTCTTTC 58.643 52.381 15.65 0.00 46.96 2.62
3110 7882 2.357075 GATCCGGTCCACTTTCTTTCC 58.643 52.381 0.00 0.00 0.00 3.13
3111 7883 0.399075 TCCGGTCCACTTTCTTTCCC 59.601 55.000 0.00 0.00 0.00 3.97
3112 7884 0.400594 CCGGTCCACTTTCTTTCCCT 59.599 55.000 0.00 0.00 0.00 4.20
3113 7885 1.610886 CCGGTCCACTTTCTTTCCCTC 60.611 57.143 0.00 0.00 0.00 4.30
3114 7886 1.348036 CGGTCCACTTTCTTTCCCTCT 59.652 52.381 0.00 0.00 0.00 3.69
3115 7887 2.565834 CGGTCCACTTTCTTTCCCTCTA 59.434 50.000 0.00 0.00 0.00 2.43
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.319211 TGACACGCAACTAGGGAACG 60.319 55.000 0.00 0.00 0.00 3.95
51 52 6.657541 GGTTGTCCATTATTTGGTCTCAGTTA 59.342 38.462 0.00 0.00 46.52 2.24
83 84 0.524862 CAAGTCCAGCCTTGACATGC 59.475 55.000 0.00 0.00 43.65 4.06
90 91 1.898574 CGGTTGCAAGTCCAGCCTT 60.899 57.895 0.00 0.00 34.33 4.35
96 97 2.034053 TGTTTTCATCGGTTGCAAGTCC 59.966 45.455 0.00 0.00 0.00 3.85
116 117 6.356186 TGTCTCCTCATCCTCATAATCATG 57.644 41.667 0.00 0.00 0.00 3.07
119 120 7.050377 TGTTTTGTCTCCTCATCCTCATAATC 58.950 38.462 0.00 0.00 0.00 1.75
131 132 6.183360 CGATGTAGTGATTGTTTTGTCTCCTC 60.183 42.308 0.00 0.00 0.00 3.71
145 146 3.461061 CAGGCAATGACGATGTAGTGAT 58.539 45.455 0.00 0.00 0.00 3.06
150 151 0.251634 TGGCAGGCAATGACGATGTA 59.748 50.000 0.00 0.00 41.39 2.29
151 152 0.394762 ATGGCAGGCAATGACGATGT 60.395 50.000 0.00 0.00 41.39 3.06
226 228 2.359354 TTGTGTATTGGCGGCGCT 60.359 55.556 32.30 15.07 0.00 5.92
228 230 0.523125 CATGTTGTGTATTGGCGGCG 60.523 55.000 0.51 0.51 0.00 6.46
231 233 2.083774 ACCTCATGTTGTGTATTGGCG 58.916 47.619 0.00 0.00 0.00 5.69
235 237 2.290008 TGCGGACCTCATGTTGTGTATT 60.290 45.455 0.00 0.00 0.00 1.89
268 270 4.117685 GTGAGTTTTCACCTAGTTCGTGT 58.882 43.478 0.00 0.00 46.47 4.49
269 271 4.710528 GTGAGTTTTCACCTAGTTCGTG 57.289 45.455 0.00 0.00 46.47 4.35
280 282 3.766151 CGCCGTATCTAGTGAGTTTTCA 58.234 45.455 0.00 0.00 0.00 2.69
345 349 1.602323 GTGTTCATGCACCCCCGAA 60.602 57.895 0.00 0.00 33.53 4.30
346 350 2.033448 GTGTTCATGCACCCCCGA 59.967 61.111 0.00 0.00 33.53 5.14
402 406 9.289303 ACAATTAAACGATGCAAGATTTGTATC 57.711 29.630 9.07 9.07 45.59 2.24
509 513 9.116054 CTTTTGTTTGTTTGTTTGATTTCTTGG 57.884 29.630 0.00 0.00 0.00 3.61
514 518 6.385843 GGGCTTTTGTTTGTTTGTTTGATTT 58.614 32.000 0.00 0.00 0.00 2.17
525 529 2.100087 CAGGTTACGGGCTTTTGTTTGT 59.900 45.455 0.00 0.00 0.00 2.83
556 560 2.029964 TCGTTTCCGAGTGTGGGC 59.970 61.111 0.00 0.00 38.40 5.36
590 594 2.349155 GGCCGTGTTGTCTCTTTTTACG 60.349 50.000 0.00 0.00 0.00 3.18
592 596 1.868498 CGGCCGTGTTGTCTCTTTTTA 59.132 47.619 19.50 0.00 0.00 1.52
616 620 5.746245 CGAGTTGTTTTTCTGTTTTGCCATA 59.254 36.000 0.00 0.00 0.00 2.74
633 637 1.057636 CGCACATACGAACGAGTTGT 58.942 50.000 0.14 0.00 34.06 3.32
637 641 0.362179 CACACGCACATACGAACGAG 59.638 55.000 0.14 0.00 36.70 4.18
642 646 0.879090 AGTCTCACACGCACATACGA 59.121 50.000 0.00 0.00 36.70 3.43
749 753 9.030301 GTGTTACAATTTTGCTAAAACACATCT 57.970 29.630 15.78 0.00 32.37 2.90
750 754 9.030301 AGTGTTACAATTTTGCTAAAACACATC 57.970 29.630 20.04 2.67 32.37 3.06
751 755 8.940768 AGTGTTACAATTTTGCTAAAACACAT 57.059 26.923 20.04 8.69 32.37 3.21
752 756 9.856488 TTAGTGTTACAATTTTGCTAAAACACA 57.144 25.926 20.04 8.17 32.37 3.72
761 765 7.480542 CGTGTAGGATTAGTGTTACAATTTTGC 59.519 37.037 0.00 0.00 0.00 3.68
767 771 8.742777 AGTTATCGTGTAGGATTAGTGTTACAA 58.257 33.333 0.00 0.00 0.00 2.41
813 817 7.676683 ACCAGATTACAGGTCAGTATATGTT 57.323 36.000 0.00 0.00 29.89 2.71
826 830 3.679980 CCAACGTCAGAACCAGATTACAG 59.320 47.826 0.00 0.00 0.00 2.74
899 904 3.944650 TCGTACGTATTAACACAGGCCTA 59.055 43.478 16.05 0.00 0.00 3.93
903 908 5.227238 AGTCTCGTACGTATTAACACAGG 57.773 43.478 16.05 0.00 0.00 4.00
921 927 2.808315 CCAGGCGCATACGAGTCT 59.192 61.111 10.83 0.00 43.93 3.24
939 945 0.661780 GAGGACAGGAATCGATCGCG 60.662 60.000 11.09 0.00 39.35 5.87
941 947 1.032794 TGGAGGACAGGAATCGATCG 58.967 55.000 9.36 9.36 0.00 3.69
1004 1013 2.667473 ACTAACAGTACGATGGCACC 57.333 50.000 0.00 0.00 0.00 5.01
1116 1131 2.679342 CCTGAAATCCCCTCGCCCA 61.679 63.158 0.00 0.00 0.00 5.36
1138 1153 2.315386 GGTTCACCGCCGACTGAAC 61.315 63.158 15.29 15.29 43.75 3.18
1165 1180 3.055719 CCACTCGCGGTTGCCATT 61.056 61.111 6.13 0.00 38.08 3.16
1266 1644 8.154203 CCACATGTACCATCATAACCATACTTA 58.846 37.037 0.00 0.00 0.00 2.24
1368 1746 3.605002 CGTGGTCATCGAAGTAGATCTCG 60.605 52.174 0.00 0.00 0.00 4.04
1461 1840 1.007038 GTCGTTGGCGTGGACACTA 60.007 57.895 0.56 0.00 39.49 2.74
1572 1951 4.143333 CGGTGGAAGGCGATCCGT 62.143 66.667 7.69 0.00 42.76 4.69
1977 2363 2.203337 GTGCACCCAACCTCAGCA 60.203 61.111 5.22 0.00 0.00 4.41
1980 2366 4.263572 CCCGTGCACCCAACCTCA 62.264 66.667 12.15 0.00 0.00 3.86
2016 2402 4.631740 TCCCACGGCACTCTCCCA 62.632 66.667 0.00 0.00 0.00 4.37
2154 2545 4.858850 TGCTATTTCCTATGCCATATGGG 58.141 43.478 23.30 6.25 40.85 4.00
2155 2546 4.885907 CCTGCTATTTCCTATGCCATATGG 59.114 45.833 18.07 18.07 38.53 2.74
2213 2606 3.325135 CCCCTCTCTCTCTCTCTCTAGAC 59.675 56.522 0.00 0.00 0.00 2.59
2214 2607 3.587498 CCCCTCTCTCTCTCTCTCTAGA 58.413 54.545 0.00 0.00 0.00 2.43
2216 2609 2.054799 GCCCCTCTCTCTCTCTCTCTA 58.945 57.143 0.00 0.00 0.00 2.43
2217 2610 0.846693 GCCCCTCTCTCTCTCTCTCT 59.153 60.000 0.00 0.00 0.00 3.10
2218 2611 0.178990 GGCCCCTCTCTCTCTCTCTC 60.179 65.000 0.00 0.00 0.00 3.20
2219 2612 0.627469 AGGCCCCTCTCTCTCTCTCT 60.627 60.000 0.00 0.00 0.00 3.10
2220 2613 0.468029 CAGGCCCCTCTCTCTCTCTC 60.468 65.000 0.00 0.00 0.00 3.20
2302 7073 7.387643 AGTAAATTTGGAACTGAGAGAGTACC 58.612 38.462 0.00 0.00 33.09 3.34
2441 7213 9.953697 AAAAATAAGTGTATACTCGCACAAAAA 57.046 25.926 4.17 0.00 35.69 1.94
2465 7237 9.169592 CCGGACTGTATTTCTTTAGGATAAAAA 57.830 33.333 0.00 0.00 0.00 1.94
2466 7238 7.281549 GCCGGACTGTATTTCTTTAGGATAAAA 59.718 37.037 5.05 0.00 0.00 1.52
2467 7239 6.764560 GCCGGACTGTATTTCTTTAGGATAAA 59.235 38.462 5.05 0.00 0.00 1.40
2468 7240 6.285990 GCCGGACTGTATTTCTTTAGGATAA 58.714 40.000 5.05 0.00 0.00 1.75
2469 7241 5.221581 GGCCGGACTGTATTTCTTTAGGATA 60.222 44.000 5.05 0.00 0.00 2.59
2470 7242 4.444449 GGCCGGACTGTATTTCTTTAGGAT 60.444 45.833 5.05 0.00 0.00 3.24
2471 7243 3.118519 GGCCGGACTGTATTTCTTTAGGA 60.119 47.826 5.05 0.00 0.00 2.94
2472 7244 3.203716 GGCCGGACTGTATTTCTTTAGG 58.796 50.000 5.05 0.00 0.00 2.69
2473 7245 2.864343 CGGCCGGACTGTATTTCTTTAG 59.136 50.000 20.10 0.00 0.00 1.85
2474 7246 2.234414 ACGGCCGGACTGTATTTCTTTA 59.766 45.455 31.76 0.00 35.54 1.85
2475 7247 1.002773 ACGGCCGGACTGTATTTCTTT 59.997 47.619 31.76 0.00 35.54 2.52
2476 7248 0.611714 ACGGCCGGACTGTATTTCTT 59.388 50.000 31.76 0.00 35.54 2.52
2477 7249 1.135721 GTACGGCCGGACTGTATTTCT 59.864 52.381 33.55 7.55 42.13 2.52
2478 7250 1.135721 AGTACGGCCGGACTGTATTTC 59.864 52.381 41.61 12.78 42.13 2.17
2479 7251 1.188863 AGTACGGCCGGACTGTATTT 58.811 50.000 41.61 17.81 42.13 1.40
2480 7252 2.057137 TAGTACGGCCGGACTGTATT 57.943 50.000 45.93 26.86 42.13 1.89
2481 7253 2.283145 ATAGTACGGCCGGACTGTAT 57.717 50.000 45.93 32.47 42.13 2.29
2482 7254 1.949525 GAATAGTACGGCCGGACTGTA 59.050 52.381 45.93 31.77 40.02 2.74
2483 7255 0.743097 GAATAGTACGGCCGGACTGT 59.257 55.000 45.93 39.29 40.02 3.55
2484 7256 0.031721 GGAATAGTACGGCCGGACTG 59.968 60.000 45.93 13.56 40.02 3.51
2485 7257 0.106318 AGGAATAGTACGGCCGGACT 60.106 55.000 42.62 42.62 42.78 3.85
2486 7258 0.749049 AAGGAATAGTACGGCCGGAC 59.251 55.000 33.85 33.85 0.00 4.79
2487 7259 1.035139 GAAGGAATAGTACGGCCGGA 58.965 55.000 31.76 21.43 0.00 5.14
2488 7260 0.748450 TGAAGGAATAGTACGGCCGG 59.252 55.000 31.76 11.88 0.00 6.13
2489 7261 2.589798 TTGAAGGAATAGTACGGCCG 57.410 50.000 26.86 26.86 0.00 6.13
2490 7262 5.465724 CACTATTTGAAGGAATAGTACGGCC 59.534 44.000 9.26 0.00 46.06 6.13
2491 7263 6.047231 ACACTATTTGAAGGAATAGTACGGC 58.953 40.000 9.26 0.00 46.06 5.68
2492 7264 8.488651 AAACACTATTTGAAGGAATAGTACGG 57.511 34.615 9.26 2.47 46.06 4.02
2542 7314 4.268279 CCCATGGCATTCTGGGCAAAAA 62.268 50.000 11.55 0.00 45.41 1.94
2543 7315 2.790951 CCCATGGCATTCTGGGCAAAA 61.791 52.381 11.55 0.00 45.41 2.44
2544 7316 1.266160 CCCATGGCATTCTGGGCAAA 61.266 55.000 11.55 0.00 45.41 3.68
2545 7317 1.686455 CCCATGGCATTCTGGGCAA 60.686 57.895 11.55 0.00 45.41 4.52
2546 7318 2.042741 CCCATGGCATTCTGGGCA 60.043 61.111 11.55 0.00 45.41 5.36
2549 7321 0.323633 TGACACCCATGGCATTCTGG 60.324 55.000 6.09 0.00 39.72 3.86
2550 7322 3.269578 TGACACCCATGGCATTCTG 57.730 52.632 6.09 0.00 39.72 3.02
2556 7328 2.299867 ACAAAGAAATGACACCCATGGC 59.700 45.455 6.09 0.00 35.24 4.40
2557 7329 3.573538 TGACAAAGAAATGACACCCATGG 59.426 43.478 4.14 4.14 35.24 3.66
2558 7330 4.852134 TGACAAAGAAATGACACCCATG 57.148 40.909 0.00 0.00 35.24 3.66
2559 7331 5.363580 AGTTTGACAAAGAAATGACACCCAT 59.636 36.000 0.00 0.00 36.99 4.00
2560 7332 4.709397 AGTTTGACAAAGAAATGACACCCA 59.291 37.500 0.00 0.00 0.00 4.51
2561 7333 5.262588 AGTTTGACAAAGAAATGACACCC 57.737 39.130 0.00 0.00 0.00 4.61
2562 7334 6.329496 TGAAGTTTGACAAAGAAATGACACC 58.671 36.000 0.00 0.00 0.00 4.16
2563 7335 7.992180 ATGAAGTTTGACAAAGAAATGACAC 57.008 32.000 0.00 0.00 0.00 3.67
2566 7338 9.611284 CGAATATGAAGTTTGACAAAGAAATGA 57.389 29.630 0.00 0.00 0.00 2.57
2567 7339 9.611284 TCGAATATGAAGTTTGACAAAGAAATG 57.389 29.630 0.00 0.00 0.00 2.32
2568 7340 9.831737 CTCGAATATGAAGTTTGACAAAGAAAT 57.168 29.630 0.00 0.00 0.00 2.17
2569 7341 8.836413 ACTCGAATATGAAGTTTGACAAAGAAA 58.164 29.630 0.00 0.00 0.00 2.52
2570 7342 8.378172 ACTCGAATATGAAGTTTGACAAAGAA 57.622 30.769 0.00 0.00 0.00 2.52
2571 7343 7.962964 ACTCGAATATGAAGTTTGACAAAGA 57.037 32.000 0.00 0.00 0.00 2.52
2572 7344 9.140286 TCTACTCGAATATGAAGTTTGACAAAG 57.860 33.333 0.00 0.00 0.00 2.77
2573 7345 9.483916 TTCTACTCGAATATGAAGTTTGACAAA 57.516 29.630 0.00 0.00 0.00 2.83
2574 7346 9.653287 ATTCTACTCGAATATGAAGTTTGACAA 57.347 29.630 0.00 0.00 40.51 3.18
2575 7347 9.087424 CATTCTACTCGAATATGAAGTTTGACA 57.913 33.333 0.00 0.00 40.33 3.58
2576 7348 8.543774 CCATTCTACTCGAATATGAAGTTTGAC 58.456 37.037 0.00 0.00 40.33 3.18
2577 7349 8.258007 ACCATTCTACTCGAATATGAAGTTTGA 58.742 33.333 0.00 0.00 40.33 2.69
2578 7350 8.425577 ACCATTCTACTCGAATATGAAGTTTG 57.574 34.615 0.00 0.00 40.33 2.93
2579 7351 8.258007 TGACCATTCTACTCGAATATGAAGTTT 58.742 33.333 0.00 0.00 40.33 2.66
2580 7352 7.782049 TGACCATTCTACTCGAATATGAAGTT 58.218 34.615 0.00 0.00 40.33 2.66
2581 7353 7.348080 TGACCATTCTACTCGAATATGAAGT 57.652 36.000 0.00 0.00 40.33 3.01
2582 7354 7.169982 GGTTGACCATTCTACTCGAATATGAAG 59.830 40.741 0.00 0.00 40.33 3.02
2583 7355 6.984474 GGTTGACCATTCTACTCGAATATGAA 59.016 38.462 0.00 0.00 40.33 2.57
2584 7356 6.097696 TGGTTGACCATTCTACTCGAATATGA 59.902 38.462 0.00 0.00 42.01 2.15
2585 7357 6.280643 TGGTTGACCATTCTACTCGAATATG 58.719 40.000 0.00 0.00 42.01 1.78
2586 7358 6.479972 TGGTTGACCATTCTACTCGAATAT 57.520 37.500 0.00 0.00 42.01 1.28
2587 7359 5.925506 TGGTTGACCATTCTACTCGAATA 57.074 39.130 0.00 0.00 42.01 1.75
2588 7360 4.819105 TGGTTGACCATTCTACTCGAAT 57.181 40.909 0.00 0.00 42.01 3.34
2658 7430 9.202273 GCACCTGTTATGAATTGTAAATTTGAA 57.798 29.630 0.00 0.00 0.00 2.69
2659 7431 8.363390 TGCACCTGTTATGAATTGTAAATTTGA 58.637 29.630 0.00 0.00 0.00 2.69
2660 7432 8.531622 TGCACCTGTTATGAATTGTAAATTTG 57.468 30.769 0.00 0.00 0.00 2.32
2661 7433 9.153721 CATGCACCTGTTATGAATTGTAAATTT 57.846 29.630 0.00 0.00 0.00 1.82
2662 7434 8.313292 ACATGCACCTGTTATGAATTGTAAATT 58.687 29.630 0.00 0.00 0.00 1.82
2663 7435 7.760794 CACATGCACCTGTTATGAATTGTAAAT 59.239 33.333 0.00 0.00 0.00 1.40
2664 7436 7.089538 CACATGCACCTGTTATGAATTGTAAA 58.910 34.615 0.00 0.00 0.00 2.01
2665 7437 6.350027 CCACATGCACCTGTTATGAATTGTAA 60.350 38.462 0.00 0.00 0.00 2.41
2666 7438 5.125257 CCACATGCACCTGTTATGAATTGTA 59.875 40.000 0.00 0.00 0.00 2.41
2667 7439 4.082081 CCACATGCACCTGTTATGAATTGT 60.082 41.667 0.00 0.00 0.00 2.71
2668 7440 4.158209 TCCACATGCACCTGTTATGAATTG 59.842 41.667 0.00 0.00 0.00 2.32
2669 7441 4.343231 TCCACATGCACCTGTTATGAATT 58.657 39.130 0.00 0.00 0.00 2.17
2670 7442 3.966979 TCCACATGCACCTGTTATGAAT 58.033 40.909 0.00 0.00 0.00 2.57
2671 7443 3.431673 TCCACATGCACCTGTTATGAA 57.568 42.857 0.00 0.00 0.00 2.57
2672 7444 3.081061 GTTCCACATGCACCTGTTATGA 58.919 45.455 0.00 0.00 0.00 2.15
2673 7445 2.164219 GGTTCCACATGCACCTGTTATG 59.836 50.000 0.00 0.00 0.00 1.90
2674 7446 2.224992 TGGTTCCACATGCACCTGTTAT 60.225 45.455 0.00 0.00 0.00 1.89
2675 7447 1.143889 TGGTTCCACATGCACCTGTTA 59.856 47.619 0.00 0.00 0.00 2.41
2676 7448 0.106268 TGGTTCCACATGCACCTGTT 60.106 50.000 0.00 0.00 0.00 3.16
2677 7449 0.112995 ATGGTTCCACATGCACCTGT 59.887 50.000 0.00 0.00 0.00 4.00
2678 7450 0.528924 CATGGTTCCACATGCACCTG 59.471 55.000 0.00 0.00 41.43 4.00
2679 7451 2.965805 CATGGTTCCACATGCACCT 58.034 52.632 0.00 0.00 41.43 4.00
2685 7457 2.692709 TTTGGGACATGGTTCCACAT 57.307 45.000 4.85 0.00 41.52 3.21
2686 7458 2.461300 TTTTGGGACATGGTTCCACA 57.539 45.000 4.85 0.00 41.52 4.17
2687 7459 4.314961 GAATTTTTGGGACATGGTTCCAC 58.685 43.478 4.85 0.00 41.52 4.02
2688 7460 3.326297 GGAATTTTTGGGACATGGTTCCA 59.674 43.478 4.85 2.70 39.83 3.53
2689 7461 3.582647 AGGAATTTTTGGGACATGGTTCC 59.417 43.478 0.00 0.00 39.30 3.62
2690 7462 4.040339 ACAGGAATTTTTGGGACATGGTTC 59.960 41.667 0.00 0.00 39.30 3.62
2691 7463 3.973305 ACAGGAATTTTTGGGACATGGTT 59.027 39.130 0.00 0.00 39.30 3.67
2692 7464 3.578282 GACAGGAATTTTTGGGACATGGT 59.422 43.478 0.00 0.00 39.30 3.55
2693 7465 3.834231 AGACAGGAATTTTTGGGACATGG 59.166 43.478 0.00 0.00 39.30 3.66
2694 7466 4.813027 CAGACAGGAATTTTTGGGACATG 58.187 43.478 0.00 0.00 39.30 3.21
2695 7467 3.259123 GCAGACAGGAATTTTTGGGACAT 59.741 43.478 0.00 0.00 39.30 3.06
2696 7468 2.627699 GCAGACAGGAATTTTTGGGACA 59.372 45.455 0.00 0.00 0.00 4.02
2697 7469 2.893489 AGCAGACAGGAATTTTTGGGAC 59.107 45.455 0.00 0.00 0.00 4.46
2698 7470 2.892852 CAGCAGACAGGAATTTTTGGGA 59.107 45.455 0.00 0.00 0.00 4.37
2699 7471 2.028748 CCAGCAGACAGGAATTTTTGGG 60.029 50.000 0.00 0.00 0.00 4.12
2700 7472 2.892852 TCCAGCAGACAGGAATTTTTGG 59.107 45.455 0.00 0.00 0.00 3.28
2701 7473 3.057033 CCTCCAGCAGACAGGAATTTTTG 60.057 47.826 0.00 0.00 29.89 2.44
2702 7474 3.160269 CCTCCAGCAGACAGGAATTTTT 58.840 45.455 0.00 0.00 29.89 1.94
2703 7475 2.108952 ACCTCCAGCAGACAGGAATTTT 59.891 45.455 1.69 0.00 29.89 1.82
2704 7476 1.707427 ACCTCCAGCAGACAGGAATTT 59.293 47.619 1.69 0.00 29.89 1.82
2705 7477 1.366319 ACCTCCAGCAGACAGGAATT 58.634 50.000 1.69 0.00 29.89 2.17
2706 7478 1.834263 GTACCTCCAGCAGACAGGAAT 59.166 52.381 1.69 0.00 29.89 3.01
2707 7479 1.267121 GTACCTCCAGCAGACAGGAA 58.733 55.000 1.69 0.00 29.89 3.36
2708 7480 0.114364 TGTACCTCCAGCAGACAGGA 59.886 55.000 1.69 0.00 0.00 3.86
2709 7481 1.198713 ATGTACCTCCAGCAGACAGG 58.801 55.000 0.00 0.00 0.00 4.00
2710 7482 4.160439 TCTTAATGTACCTCCAGCAGACAG 59.840 45.833 0.00 0.00 0.00 3.51
2711 7483 4.081642 GTCTTAATGTACCTCCAGCAGACA 60.082 45.833 0.00 0.00 0.00 3.41
2712 7484 4.434520 GTCTTAATGTACCTCCAGCAGAC 58.565 47.826 0.00 0.00 0.00 3.51
2713 7485 3.130516 CGTCTTAATGTACCTCCAGCAGA 59.869 47.826 0.00 0.00 0.00 4.26
2714 7486 3.119101 ACGTCTTAATGTACCTCCAGCAG 60.119 47.826 0.00 0.00 0.00 4.24
2715 7487 2.829720 ACGTCTTAATGTACCTCCAGCA 59.170 45.455 0.00 0.00 0.00 4.41
2716 7488 3.521947 ACGTCTTAATGTACCTCCAGC 57.478 47.619 0.00 0.00 0.00 4.85
2717 7489 8.573885 TGATTATACGTCTTAATGTACCTCCAG 58.426 37.037 8.05 0.00 29.78 3.86
2718 7490 8.355169 GTGATTATACGTCTTAATGTACCTCCA 58.645 37.037 8.05 0.00 29.78 3.86
2719 7491 7.811713 GGTGATTATACGTCTTAATGTACCTCC 59.188 40.741 16.94 8.44 29.78 4.30
2720 7492 8.574737 AGGTGATTATACGTCTTAATGTACCTC 58.425 37.037 18.95 5.99 32.85 3.85
2721 7493 8.474710 AGGTGATTATACGTCTTAATGTACCT 57.525 34.615 18.95 18.95 33.11 3.08
2722 7494 9.189723 GAAGGTGATTATACGTCTTAATGTACC 57.810 37.037 16.72 16.72 29.78 3.34
2723 7495 9.189723 GGAAGGTGATTATACGTCTTAATGTAC 57.810 37.037 8.05 7.21 29.78 2.90
2724 7496 8.916062 TGGAAGGTGATTATACGTCTTAATGTA 58.084 33.333 8.05 0.00 0.00 2.29
2725 7497 7.788026 TGGAAGGTGATTATACGTCTTAATGT 58.212 34.615 8.05 0.00 0.00 2.71
2726 7498 8.657074 TTGGAAGGTGATTATACGTCTTAATG 57.343 34.615 8.05 0.00 0.00 1.90
2727 7499 9.106070 GTTTGGAAGGTGATTATACGTCTTAAT 57.894 33.333 0.00 0.00 0.00 1.40
2728 7500 7.276218 CGTTTGGAAGGTGATTATACGTCTTAA 59.724 37.037 0.00 0.00 0.00 1.85
2729 7501 6.753279 CGTTTGGAAGGTGATTATACGTCTTA 59.247 38.462 0.00 0.00 0.00 2.10
2730 7502 5.579511 CGTTTGGAAGGTGATTATACGTCTT 59.420 40.000 0.00 0.00 0.00 3.01
2731 7503 5.107133 CGTTTGGAAGGTGATTATACGTCT 58.893 41.667 0.00 0.00 0.00 4.18
2732 7504 4.269363 CCGTTTGGAAGGTGATTATACGTC 59.731 45.833 0.00 0.00 37.49 4.34
2733 7505 4.186159 CCGTTTGGAAGGTGATTATACGT 58.814 43.478 0.00 0.00 37.49 3.57
2734 7506 4.186159 ACCGTTTGGAAGGTGATTATACG 58.814 43.478 0.00 0.00 39.66 3.06
2735 7507 5.180271 TGACCGTTTGGAAGGTGATTATAC 58.820 41.667 0.00 0.00 41.51 1.47
2736 7508 5.188163 TCTGACCGTTTGGAAGGTGATTATA 59.812 40.000 0.00 0.00 41.51 0.98
2737 7509 4.019681 TCTGACCGTTTGGAAGGTGATTAT 60.020 41.667 0.00 0.00 41.51 1.28
2738 7510 3.325425 TCTGACCGTTTGGAAGGTGATTA 59.675 43.478 0.00 0.00 41.51 1.75
2739 7511 2.105821 TCTGACCGTTTGGAAGGTGATT 59.894 45.455 0.00 0.00 41.51 2.57
2740 7512 1.697432 TCTGACCGTTTGGAAGGTGAT 59.303 47.619 0.00 0.00 41.51 3.06
2741 7513 1.124780 TCTGACCGTTTGGAAGGTGA 58.875 50.000 0.00 0.00 41.51 4.02
2742 7514 1.961793 TTCTGACCGTTTGGAAGGTG 58.038 50.000 0.00 0.00 41.51 4.00
2743 7515 2.721425 TTTCTGACCGTTTGGAAGGT 57.279 45.000 0.00 0.00 44.64 3.50
2744 7516 3.243401 CCTTTTTCTGACCGTTTGGAAGG 60.243 47.826 0.00 0.00 39.21 3.46
2745 7517 3.380320 ACCTTTTTCTGACCGTTTGGAAG 59.620 43.478 0.00 0.00 39.21 3.46
2746 7518 3.358118 ACCTTTTTCTGACCGTTTGGAA 58.642 40.909 0.00 0.00 39.21 3.53
2747 7519 3.007473 ACCTTTTTCTGACCGTTTGGA 57.993 42.857 0.00 0.00 39.21 3.53
2748 7520 3.119280 ACAACCTTTTTCTGACCGTTTGG 60.119 43.478 0.00 0.00 42.84 3.28
2749 7521 4.104696 ACAACCTTTTTCTGACCGTTTG 57.895 40.909 0.00 0.00 0.00 2.93
2750 7522 6.459670 AATACAACCTTTTTCTGACCGTTT 57.540 33.333 0.00 0.00 0.00 3.60
2751 7523 7.571080 TTAATACAACCTTTTTCTGACCGTT 57.429 32.000 0.00 0.00 0.00 4.44
2752 7524 7.754851 ATTAATACAACCTTTTTCTGACCGT 57.245 32.000 0.00 0.00 0.00 4.83
2753 7525 9.716507 CATATTAATACAACCTTTTTCTGACCG 57.283 33.333 0.00 0.00 0.00 4.79
2756 7528 9.983024 TCCCATATTAATACAACCTTTTTCTGA 57.017 29.630 0.00 0.00 0.00 3.27
2758 7530 9.990868 AGTCCCATATTAATACAACCTTTTTCT 57.009 29.630 0.00 0.00 0.00 2.52
2760 7532 8.899771 CGAGTCCCATATTAATACAACCTTTTT 58.100 33.333 0.00 0.00 0.00 1.94
2761 7533 8.050930 ACGAGTCCCATATTAATACAACCTTTT 58.949 33.333 0.00 0.00 0.00 2.27
2762 7534 7.571025 ACGAGTCCCATATTAATACAACCTTT 58.429 34.615 0.00 0.00 0.00 3.11
2763 7535 7.133133 ACGAGTCCCATATTAATACAACCTT 57.867 36.000 0.00 0.00 0.00 3.50
2764 7536 6.742559 ACGAGTCCCATATTAATACAACCT 57.257 37.500 0.00 0.00 0.00 3.50
2765 7537 9.798994 CTATACGAGTCCCATATTAATACAACC 57.201 37.037 0.00 0.00 0.00 3.77
2766 7538 9.798994 CCTATACGAGTCCCATATTAATACAAC 57.201 37.037 0.00 0.00 0.00 3.32
2767 7539 9.537852 ACCTATACGAGTCCCATATTAATACAA 57.462 33.333 0.00 0.00 0.00 2.41
2768 7540 8.963725 CACCTATACGAGTCCCATATTAATACA 58.036 37.037 0.00 0.00 0.00 2.29
2769 7541 8.411683 CCACCTATACGAGTCCCATATTAATAC 58.588 40.741 0.00 0.00 0.00 1.89
2770 7542 8.338493 TCCACCTATACGAGTCCCATATTAATA 58.662 37.037 0.00 0.00 0.00 0.98
2771 7543 7.186972 TCCACCTATACGAGTCCCATATTAAT 58.813 38.462 0.00 0.00 0.00 1.40
2772 7544 6.554784 TCCACCTATACGAGTCCCATATTAA 58.445 40.000 0.00 0.00 0.00 1.40
2773 7545 6.143551 TCCACCTATACGAGTCCCATATTA 57.856 41.667 0.00 0.00 0.00 0.98
2774 7546 5.006896 TCCACCTATACGAGTCCCATATT 57.993 43.478 0.00 0.00 0.00 1.28
2775 7547 4.669866 TCCACCTATACGAGTCCCATAT 57.330 45.455 0.00 0.00 0.00 1.78
2776 7548 4.597004 GATCCACCTATACGAGTCCCATA 58.403 47.826 0.00 0.00 0.00 2.74
2777 7549 3.432378 GATCCACCTATACGAGTCCCAT 58.568 50.000 0.00 0.00 0.00 4.00
2778 7550 2.812983 CGATCCACCTATACGAGTCCCA 60.813 54.545 0.00 0.00 0.00 4.37
2779 7551 1.811359 CGATCCACCTATACGAGTCCC 59.189 57.143 0.00 0.00 0.00 4.46
2780 7552 2.775890 TCGATCCACCTATACGAGTCC 58.224 52.381 0.00 0.00 0.00 3.85
2781 7553 4.972201 GAATCGATCCACCTATACGAGTC 58.028 47.826 0.00 0.00 39.82 3.36
2795 7567 1.134401 TGTGGAAGGCAGGAATCGATC 60.134 52.381 0.00 0.00 0.00 3.69
2796 7568 0.911769 TGTGGAAGGCAGGAATCGAT 59.088 50.000 0.00 0.00 0.00 3.59
2797 7569 0.911769 ATGTGGAAGGCAGGAATCGA 59.088 50.000 0.00 0.00 0.00 3.59
2798 7570 2.213499 GTATGTGGAAGGCAGGAATCG 58.787 52.381 0.00 0.00 0.00 3.34
2799 7571 2.092429 TGGTATGTGGAAGGCAGGAATC 60.092 50.000 0.00 0.00 0.00 2.52
2800 7572 1.922447 TGGTATGTGGAAGGCAGGAAT 59.078 47.619 0.00 0.00 0.00 3.01
2801 7573 1.367346 TGGTATGTGGAAGGCAGGAA 58.633 50.000 0.00 0.00 0.00 3.36
2802 7574 1.367346 TTGGTATGTGGAAGGCAGGA 58.633 50.000 0.00 0.00 0.00 3.86
2803 7575 2.094675 CTTTGGTATGTGGAAGGCAGG 58.905 52.381 0.00 0.00 0.00 4.85
2804 7576 2.489329 CACTTTGGTATGTGGAAGGCAG 59.511 50.000 0.00 0.00 0.00 4.85
2805 7577 2.107378 TCACTTTGGTATGTGGAAGGCA 59.893 45.455 0.00 0.00 35.15 4.75
2806 7578 2.488153 GTCACTTTGGTATGTGGAAGGC 59.512 50.000 0.00 0.00 35.15 4.35
2807 7579 3.081804 GGTCACTTTGGTATGTGGAAGG 58.918 50.000 0.00 0.00 35.15 3.46
2808 7580 3.750371 TGGTCACTTTGGTATGTGGAAG 58.250 45.455 0.00 0.00 35.15 3.46
2809 7581 3.866703 TGGTCACTTTGGTATGTGGAA 57.133 42.857 0.00 0.00 35.15 3.53
2810 7582 3.392947 TCTTGGTCACTTTGGTATGTGGA 59.607 43.478 0.00 0.00 35.15 4.02
2811 7583 3.750371 TCTTGGTCACTTTGGTATGTGG 58.250 45.455 0.00 0.00 35.15 4.17
2812 7584 8.777413 CATATATCTTGGTCACTTTGGTATGTG 58.223 37.037 0.00 0.00 35.68 3.21
2813 7585 8.494433 ACATATATCTTGGTCACTTTGGTATGT 58.506 33.333 0.00 0.00 0.00 2.29
2814 7586 8.777413 CACATATATCTTGGTCACTTTGGTATG 58.223 37.037 0.00 0.00 0.00 2.39
2815 7587 8.494433 ACACATATATCTTGGTCACTTTGGTAT 58.506 33.333 0.00 0.00 0.00 2.73
2816 7588 7.857456 ACACATATATCTTGGTCACTTTGGTA 58.143 34.615 0.00 0.00 0.00 3.25
2817 7589 6.721318 ACACATATATCTTGGTCACTTTGGT 58.279 36.000 0.00 0.00 0.00 3.67
2818 7590 7.042725 CGTACACATATATCTTGGTCACTTTGG 60.043 40.741 0.00 0.00 0.00 3.28
2819 7591 7.704899 TCGTACACATATATCTTGGTCACTTTG 59.295 37.037 0.00 0.00 0.00 2.77
2820 7592 7.778083 TCGTACACATATATCTTGGTCACTTT 58.222 34.615 0.00 0.00 0.00 2.66
2821 7593 7.284716 TCTCGTACACATATATCTTGGTCACTT 59.715 37.037 0.00 0.00 0.00 3.16
2822 7594 6.771267 TCTCGTACACATATATCTTGGTCACT 59.229 38.462 0.00 0.00 0.00 3.41
2823 7595 6.967135 TCTCGTACACATATATCTTGGTCAC 58.033 40.000 0.00 0.00 0.00 3.67
2824 7596 7.576861 TTCTCGTACACATATATCTTGGTCA 57.423 36.000 0.00 0.00 0.00 4.02
2825 7597 8.916654 CATTTCTCGTACACATATATCTTGGTC 58.083 37.037 0.00 0.00 0.00 4.02
2826 7598 7.872993 CCATTTCTCGTACACATATATCTTGGT 59.127 37.037 0.00 0.00 0.00 3.67
2827 7599 8.088365 TCCATTTCTCGTACACATATATCTTGG 58.912 37.037 0.00 0.00 0.00 3.61
2828 7600 9.133627 CTCCATTTCTCGTACACATATATCTTG 57.866 37.037 0.00 0.00 0.00 3.02
2829 7601 8.861086 ACTCCATTTCTCGTACACATATATCTT 58.139 33.333 0.00 0.00 0.00 2.40
2830 7602 8.300286 CACTCCATTTCTCGTACACATATATCT 58.700 37.037 0.00 0.00 0.00 1.98
2831 7603 7.062371 GCACTCCATTTCTCGTACACATATATC 59.938 40.741 0.00 0.00 0.00 1.63
2832 7604 6.868864 GCACTCCATTTCTCGTACACATATAT 59.131 38.462 0.00 0.00 0.00 0.86
2833 7605 6.213677 GCACTCCATTTCTCGTACACATATA 58.786 40.000 0.00 0.00 0.00 0.86
2834 7606 5.050490 GCACTCCATTTCTCGTACACATAT 58.950 41.667 0.00 0.00 0.00 1.78
2835 7607 4.430007 GCACTCCATTTCTCGTACACATA 58.570 43.478 0.00 0.00 0.00 2.29
2836 7608 3.262420 GCACTCCATTTCTCGTACACAT 58.738 45.455 0.00 0.00 0.00 3.21
2837 7609 2.611971 GGCACTCCATTTCTCGTACACA 60.612 50.000 0.00 0.00 0.00 3.72
2838 7610 2.000447 GGCACTCCATTTCTCGTACAC 59.000 52.381 0.00 0.00 0.00 2.90
2839 7611 1.621317 TGGCACTCCATTTCTCGTACA 59.379 47.619 0.00 0.00 37.47 2.90
2840 7612 2.000447 GTGGCACTCCATTTCTCGTAC 59.000 52.381 11.13 0.00 45.62 3.67
2841 7613 1.066430 GGTGGCACTCCATTTCTCGTA 60.066 52.381 18.45 0.00 45.62 3.43
2842 7614 0.321653 GGTGGCACTCCATTTCTCGT 60.322 55.000 18.45 0.00 45.62 4.18
2843 7615 1.361668 CGGTGGCACTCCATTTCTCG 61.362 60.000 18.45 5.16 45.62 4.04
2844 7616 0.321653 ACGGTGGCACTCCATTTCTC 60.322 55.000 18.45 0.00 45.62 2.87
2845 7617 0.606401 CACGGTGGCACTCCATTTCT 60.606 55.000 18.45 0.00 45.62 2.52
2846 7618 1.875963 CACGGTGGCACTCCATTTC 59.124 57.895 18.45 0.00 45.62 2.17
2847 7619 2.268076 GCACGGTGGCACTCCATTT 61.268 57.895 18.45 0.00 45.62 2.32
2848 7620 2.672996 GCACGGTGGCACTCCATT 60.673 61.111 18.45 0.00 45.62 3.16
2849 7621 3.640407 AGCACGGTGGCACTCCAT 61.640 61.111 18.45 0.00 45.62 3.41
2850 7622 4.624364 CAGCACGGTGGCACTCCA 62.624 66.667 18.45 0.00 43.09 3.86
2851 7623 2.725203 TAACAGCACGGTGGCACTCC 62.725 60.000 18.45 0.00 38.86 3.85
2852 7624 1.291877 CTAACAGCACGGTGGCACTC 61.292 60.000 18.45 6.81 35.83 3.51
2853 7625 1.301716 CTAACAGCACGGTGGCACT 60.302 57.895 18.45 0.00 35.83 4.40
2854 7626 1.164041 AACTAACAGCACGGTGGCAC 61.164 55.000 9.70 9.70 35.83 5.01
2855 7627 0.464735 AAACTAACAGCACGGTGGCA 60.465 50.000 10.60 0.00 35.83 4.92
2856 7628 0.040425 CAAACTAACAGCACGGTGGC 60.040 55.000 10.60 2.41 0.00 5.01
2857 7629 0.591170 CCAAACTAACAGCACGGTGG 59.409 55.000 10.60 0.00 0.00 4.61
2858 7630 1.263217 GACCAAACTAACAGCACGGTG 59.737 52.381 3.15 3.15 0.00 4.94
2859 7631 1.589803 GACCAAACTAACAGCACGGT 58.410 50.000 0.00 0.00 0.00 4.83
2860 7632 0.511221 CGACCAAACTAACAGCACGG 59.489 55.000 0.00 0.00 0.00 4.94
2861 7633 1.070843 CACGACCAAACTAACAGCACG 60.071 52.381 0.00 0.00 0.00 5.34
2862 7634 1.333791 GCACGACCAAACTAACAGCAC 60.334 52.381 0.00 0.00 0.00 4.40
2863 7635 0.941542 GCACGACCAAACTAACAGCA 59.058 50.000 0.00 0.00 0.00 4.41
2864 7636 1.194772 GAGCACGACCAAACTAACAGC 59.805 52.381 0.00 0.00 0.00 4.40
2865 7637 1.455786 CGAGCACGACCAAACTAACAG 59.544 52.381 0.00 0.00 42.66 3.16
2866 7638 1.202440 ACGAGCACGACCAAACTAACA 60.202 47.619 11.40 0.00 42.66 2.41
2867 7639 1.191647 CACGAGCACGACCAAACTAAC 59.808 52.381 11.40 0.00 42.66 2.34
2868 7640 1.493772 CACGAGCACGACCAAACTAA 58.506 50.000 11.40 0.00 42.66 2.24
2869 7641 0.942410 GCACGAGCACGACCAAACTA 60.942 55.000 11.40 0.00 42.66 2.24
2870 7642 2.244651 GCACGAGCACGACCAAACT 61.245 57.895 11.40 0.00 42.66 2.66
2871 7643 2.244651 AGCACGAGCACGACCAAAC 61.245 57.895 11.40 0.00 45.49 2.93
2872 7644 2.108157 AGCACGAGCACGACCAAA 59.892 55.556 11.40 0.00 45.49 3.28
2873 7645 2.661537 CAGCACGAGCACGACCAA 60.662 61.111 11.40 0.00 45.49 3.67
2876 7648 3.771491 CAGCAGCACGAGCACGAC 61.771 66.667 11.40 1.64 45.49 4.34
2879 7651 3.786586 GAGCAGCAGCACGAGCAC 61.787 66.667 7.77 0.00 45.49 4.40
2901 7673 4.143333 TAGAGCTCAACGCCGGCC 62.143 66.667 23.46 5.24 40.39 6.13
2902 7674 2.886124 GTAGAGCTCAACGCCGGC 60.886 66.667 19.07 19.07 40.39 6.13
2903 7675 2.337749 ATCGTAGAGCTCAACGCCGG 62.338 60.000 17.77 0.00 43.63 6.13
2904 7676 0.306840 TATCGTAGAGCTCAACGCCG 59.693 55.000 17.77 10.01 43.63 6.46
2905 7677 1.926827 GCTATCGTAGAGCTCAACGCC 60.927 57.143 17.77 0.00 43.63 5.68
2906 7678 1.400550 GCTATCGTAGAGCTCAACGC 58.599 55.000 17.77 4.56 43.63 4.84
2907 7679 1.664629 CGCTATCGTAGAGCTCAACG 58.335 55.000 17.77 8.65 43.63 4.10
2938 7710 9.488762 TCATCTTGGAGTAGAAGGTAAGATAAA 57.511 33.333 0.00 0.00 34.24 1.40
2939 7711 9.661954 ATCATCTTGGAGTAGAAGGTAAGATAA 57.338 33.333 0.00 0.00 34.24 1.75
2940 7712 9.303116 GATCATCTTGGAGTAGAAGGTAAGATA 57.697 37.037 0.00 0.00 34.24 1.98
2941 7713 7.786943 TGATCATCTTGGAGTAGAAGGTAAGAT 59.213 37.037 0.00 0.00 35.82 2.40
2942 7714 7.126061 TGATCATCTTGGAGTAGAAGGTAAGA 58.874 38.462 0.00 0.00 0.00 2.10
2943 7715 7.353414 TGATCATCTTGGAGTAGAAGGTAAG 57.647 40.000 0.00 0.00 0.00 2.34
2944 7716 7.345653 ACATGATCATCTTGGAGTAGAAGGTAA 59.654 37.037 4.86 0.00 0.00 2.85
2945 7717 6.841229 ACATGATCATCTTGGAGTAGAAGGTA 59.159 38.462 4.86 0.00 0.00 3.08
2946 7718 5.664908 ACATGATCATCTTGGAGTAGAAGGT 59.335 40.000 4.86 0.00 0.00 3.50
2947 7719 5.990386 CACATGATCATCTTGGAGTAGAAGG 59.010 44.000 4.86 0.00 0.00 3.46
2948 7720 6.479331 CACACATGATCATCTTGGAGTAGAAG 59.521 42.308 4.86 0.00 0.00 2.85
2949 7721 6.070596 ACACACATGATCATCTTGGAGTAGAA 60.071 38.462 4.86 0.00 0.00 2.10
2950 7722 5.423290 ACACACATGATCATCTTGGAGTAGA 59.577 40.000 4.86 0.00 0.00 2.59
2951 7723 5.668471 ACACACATGATCATCTTGGAGTAG 58.332 41.667 4.86 0.00 0.00 2.57
2952 7724 5.682234 ACACACATGATCATCTTGGAGTA 57.318 39.130 4.86 0.00 0.00 2.59
2953 7725 4.564782 ACACACATGATCATCTTGGAGT 57.435 40.909 4.86 6.77 0.00 3.85
3020 7792 9.571810 CACAATAGCTTTGCTTTTTCATACATA 57.428 29.630 0.00 0.00 40.44 2.29
3021 7793 8.090214 ACACAATAGCTTTGCTTTTTCATACAT 58.910 29.630 0.00 0.00 40.44 2.29
3022 7794 7.432869 ACACAATAGCTTTGCTTTTTCATACA 58.567 30.769 0.00 0.00 40.44 2.29
3023 7795 7.873739 ACACAATAGCTTTGCTTTTTCATAC 57.126 32.000 0.00 0.00 40.44 2.39
3024 7796 8.885494 AAACACAATAGCTTTGCTTTTTCATA 57.115 26.923 0.00 0.00 40.44 2.15
3025 7797 7.712205 AGAAACACAATAGCTTTGCTTTTTCAT 59.288 29.630 18.78 10.32 40.44 2.57
3026 7798 7.041107 AGAAACACAATAGCTTTGCTTTTTCA 58.959 30.769 18.78 0.00 40.44 2.69
3027 7799 7.436376 AGAGAAACACAATAGCTTTGCTTTTTC 59.564 33.333 0.00 6.77 40.44 2.29
3028 7800 7.267857 AGAGAAACACAATAGCTTTGCTTTTT 58.732 30.769 0.00 0.00 40.44 1.94
3029 7801 6.809869 AGAGAAACACAATAGCTTTGCTTTT 58.190 32.000 0.00 0.21 40.44 2.27
3030 7802 6.264067 AGAGAGAAACACAATAGCTTTGCTTT 59.736 34.615 0.00 0.00 40.44 3.51
3031 7803 5.767168 AGAGAGAAACACAATAGCTTTGCTT 59.233 36.000 0.00 0.00 40.44 3.91
3032 7804 5.312079 AGAGAGAAACACAATAGCTTTGCT 58.688 37.500 0.00 0.00 43.41 3.91
3033 7805 5.619625 AGAGAGAAACACAATAGCTTTGC 57.380 39.130 0.00 0.00 0.00 3.68
3034 7806 8.183830 CTCTAGAGAGAAACACAATAGCTTTG 57.816 38.462 15.05 0.00 44.74 2.77
3050 7822 4.321452 GCTCAGATTGCCATCTCTAGAGAG 60.321 50.000 25.86 15.27 41.33 3.20
3051 7823 3.573538 GCTCAGATTGCCATCTCTAGAGA 59.426 47.826 24.36 24.36 37.71 3.10
3052 7824 3.916761 GCTCAGATTGCCATCTCTAGAG 58.083 50.000 13.98 13.98 37.71 2.43
3063 7835 3.444916 CAAATCATGTGGCTCAGATTGC 58.555 45.455 11.95 0.00 31.58 3.56
3064 7836 3.130516 AGCAAATCATGTGGCTCAGATTG 59.869 43.478 11.95 7.86 31.58 2.67
3065 7837 3.362706 AGCAAATCATGTGGCTCAGATT 58.637 40.909 0.00 2.63 32.45 2.40
3066 7838 3.014304 AGCAAATCATGTGGCTCAGAT 57.986 42.857 0.00 0.00 28.71 2.90
3067 7839 2.490509 CAAGCAAATCATGTGGCTCAGA 59.509 45.455 0.00 0.00 35.11 3.27
3068 7840 2.416836 CCAAGCAAATCATGTGGCTCAG 60.417 50.000 0.00 0.00 35.11 3.35
3069 7841 1.546923 CCAAGCAAATCATGTGGCTCA 59.453 47.619 0.00 0.00 35.11 4.26
3070 7842 1.134907 CCCAAGCAAATCATGTGGCTC 60.135 52.381 0.00 0.00 35.11 4.70
3071 7843 0.899720 CCCAAGCAAATCATGTGGCT 59.100 50.000 0.00 0.00 38.45 4.75
3072 7844 0.896923 TCCCAAGCAAATCATGTGGC 59.103 50.000 0.00 0.00 0.00 5.01
3073 7845 2.101917 GGATCCCAAGCAAATCATGTGG 59.898 50.000 0.00 0.00 0.00 4.17
3074 7846 2.223641 CGGATCCCAAGCAAATCATGTG 60.224 50.000 6.06 0.00 0.00 3.21
3075 7847 2.026641 CGGATCCCAAGCAAATCATGT 58.973 47.619 6.06 0.00 0.00 3.21
3076 7848 1.338973 CCGGATCCCAAGCAAATCATG 59.661 52.381 6.06 0.00 0.00 3.07
3077 7849 1.063717 ACCGGATCCCAAGCAAATCAT 60.064 47.619 9.46 0.00 0.00 2.45
3078 7850 0.331278 ACCGGATCCCAAGCAAATCA 59.669 50.000 9.46 0.00 0.00 2.57
3079 7851 1.025041 GACCGGATCCCAAGCAAATC 58.975 55.000 9.46 0.00 0.00 2.17
3080 7852 0.395724 GGACCGGATCCCAAGCAAAT 60.396 55.000 9.46 0.00 42.46 2.32
3081 7853 1.001393 GGACCGGATCCCAAGCAAA 60.001 57.895 9.46 0.00 42.46 3.68
3082 7854 2.674754 GGACCGGATCCCAAGCAA 59.325 61.111 9.46 0.00 42.46 3.91
3090 7862 2.357075 GGAAAGAAAGTGGACCGGATC 58.643 52.381 9.46 1.18 0.00 3.36
3091 7863 1.004394 GGGAAAGAAAGTGGACCGGAT 59.996 52.381 9.46 0.00 0.00 4.18
3092 7864 0.399075 GGGAAAGAAAGTGGACCGGA 59.601 55.000 9.46 0.00 0.00 5.14
3093 7865 0.400594 AGGGAAAGAAAGTGGACCGG 59.599 55.000 0.00 0.00 0.00 5.28
3094 7866 1.348036 AGAGGGAAAGAAAGTGGACCG 59.652 52.381 0.00 0.00 0.00 4.79



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.