Multiple sequence alignment - TraesCS2B01G137900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G137900 chr2B 100.000 5477 0 0 1 5477 104822247 104816771 0.000000e+00 10115.0
1 TraesCS2B01G137900 chr2B 96.946 884 23 1 2873 3752 104826263 104825380 0.000000e+00 1480.0
2 TraesCS2B01G137900 chr2B 95.035 141 7 0 2643 2783 97944895 97944755 7.140000e-54 222.0
3 TraesCS2B01G137900 chr2B 97.297 37 0 1 4784 4820 104817430 104817395 1.650000e-05 62.1
4 TraesCS2B01G137900 chr2B 97.297 37 0 1 4818 4853 104817464 104817428 1.650000e-05 62.1
5 TraesCS2B01G137900 chr2D 94.844 2056 76 16 2782 4820 66758301 66760343 0.000000e+00 3182.0
6 TraesCS2B01G137900 chr2D 92.891 1491 58 15 1192 2658 66756836 66758302 0.000000e+00 2122.0
7 TraesCS2B01G137900 chr2D 95.748 588 23 2 4821 5407 66760311 66760897 0.000000e+00 946.0
8 TraesCS2B01G137900 chr2D 81.902 978 102 47 179 1119 66755893 66756832 0.000000e+00 756.0
9 TraesCS2B01G137900 chr2D 95.745 141 6 0 2643 2783 62390562 62390422 1.530000e-55 228.0
10 TraesCS2B01G137900 chr2D 79.167 120 24 1 182 300 595483708 595483827 1.260000e-11 82.4
11 TraesCS2B01G137900 chr2A 94.426 1489 52 12 1192 2658 68256108 68254629 0.000000e+00 2261.0
12 TraesCS2B01G137900 chr2A 97.498 1119 24 2 3704 4820 68252262 68251146 0.000000e+00 1908.0
13 TraesCS2B01G137900 chr2A 96.931 945 20 4 2782 3717 68254630 68253686 0.000000e+00 1576.0
14 TraesCS2B01G137900 chr2A 95.918 588 19 5 4823 5407 68251176 68250591 0.000000e+00 948.0
15 TraesCS2B01G137900 chr2A 80.774 879 89 36 289 1129 68256940 68256104 1.010000e-171 614.0
16 TraesCS2B01G137900 chr2A 98.462 130 2 0 2656 2785 630094749 630094620 4.270000e-56 230.0
17 TraesCS2B01G137900 chr2A 95.035 141 7 0 2643 2783 63323232 63323092 7.140000e-54 222.0
18 TraesCS2B01G137900 chr6B 100.000 127 0 0 2657 2783 542584868 542584742 9.170000e-58 235.0
19 TraesCS2B01G137900 chr6B 93.793 145 9 0 2644 2788 30348233 30348377 9.240000e-53 219.0
20 TraesCS2B01G137900 chr5B 94.631 149 2 6 2641 2788 584613509 584613652 5.520000e-55 226.0
21 TraesCS2B01G137900 chr5A 95.745 141 5 1 2645 2784 687681066 687680926 5.520000e-55 226.0
22 TraesCS2B01G137900 chr7B 95.714 140 5 1 2646 2784 461475554 461475693 1.990000e-54 224.0
23 TraesCS2B01G137900 chr7B 95.122 41 1 1 260 300 107936344 107936305 4.580000e-06 63.9
24 TraesCS2B01G137900 chr7A 80.342 117 23 0 182 298 252538481 252538365 7.560000e-14 89.8
25 TraesCS2B01G137900 chr7A 97.222 36 1 0 268 303 557070801 557070766 1.650000e-05 62.1
26 TraesCS2B01G137900 chr1B 79.675 123 23 2 179 300 424083794 424083915 2.720000e-13 87.9
27 TraesCS2B01G137900 chr3D 82.418 91 13 3 211 300 610875871 610875783 5.880000e-10 76.8
28 TraesCS2B01G137900 chr1D 78.226 124 24 3 179 300 314013567 314013689 5.880000e-10 76.8
29 TraesCS2B01G137900 chr7D 92.683 41 2 1 260 300 145778254 145778215 2.130000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G137900 chr2B 104816771 104822247 5476 True 10115.0 10115 100.00000 1 5477 1 chr2B.!!$R2 5476
1 TraesCS2B01G137900 chr2B 104825380 104826263 883 True 1480.0 1480 96.94600 2873 3752 1 chr2B.!!$R3 879
2 TraesCS2B01G137900 chr2D 66755893 66760897 5004 False 1751.5 3182 91.34625 179 5407 4 chr2D.!!$F2 5228
3 TraesCS2B01G137900 chr2A 68250591 68256940 6349 True 1461.4 2261 93.10940 289 5407 5 chr2A.!!$R3 5118

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
56 57 0.030638 TTTTCTCGCCAACAAGCAGC 59.969 50.000 0.0 0.0 0.0 5.25 F
862 881 0.033504 TCTCTTGTTCTGCCCACGAC 59.966 55.000 0.0 0.0 0.0 4.34 F
1029 1073 0.392998 CAGGTTCGTTCATGGGGAGG 60.393 60.000 0.0 0.0 0.0 4.30 F
2673 2743 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.0 0.0 0.0 3.28 F
2781 2851 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.0 0.0 0.0 3.85 F
3859 5375 1.006571 TTTCGGACAGCCTCGTGTC 60.007 57.895 0.0 0.0 45.3 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1185 1229 0.031178 CAGTCACCCAACAAGCAAGC 59.969 55.000 0.00 0.0 0.00 4.01 R
2766 2836 0.635009 AGATACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.0 0.00 4.12 R
2866 2936 0.465097 GGCTGCTGCATATGACACCT 60.465 55.000 17.89 0.0 41.91 4.00 R
4197 5722 1.889545 AAGAGACAAGCAGTTGAGCC 58.110 50.000 0.00 0.0 37.10 4.70 R
4231 5756 3.594603 ACGATCGATGGGGATAATGTC 57.405 47.619 24.34 0.0 0.00 3.06 R
5422 6954 0.391927 TGATGGCCTTTACGAACGGG 60.392 55.000 3.32 0.0 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.249189 GATGGGGGCCGGAGCATA 61.249 66.667 5.05 0.00 42.56 3.14
25 26 2.532715 ATGGGGGCCGGAGCATAT 60.533 61.111 5.05 0.00 42.56 1.78
26 27 2.142292 GATGGGGGCCGGAGCATATT 62.142 60.000 5.05 0.00 42.56 1.28
27 28 2.034221 GGGGGCCGGAGCATATTC 59.966 66.667 5.05 0.00 42.56 1.75
28 29 2.529744 GGGGGCCGGAGCATATTCT 61.530 63.158 5.05 0.00 42.56 2.40
29 30 1.003233 GGGGCCGGAGCATATTCTC 60.003 63.158 5.05 0.00 42.56 2.87
30 31 1.484444 GGGGCCGGAGCATATTCTCT 61.484 60.000 5.05 0.00 42.56 3.10
31 32 0.321122 GGGCCGGAGCATATTCTCTG 60.321 60.000 5.05 4.36 42.56 3.35
32 33 0.394565 GGCCGGAGCATATTCTCTGT 59.605 55.000 5.05 0.00 42.56 3.41
33 34 1.606737 GGCCGGAGCATATTCTCTGTC 60.607 57.143 5.05 0.00 42.56 3.51
34 35 1.606737 GCCGGAGCATATTCTCTGTCC 60.607 57.143 5.05 0.00 37.69 4.02
35 36 1.967066 CCGGAGCATATTCTCTGTCCT 59.033 52.381 9.89 0.00 37.69 3.85
36 37 2.029470 CCGGAGCATATTCTCTGTCCTC 60.029 54.545 9.89 0.00 37.69 3.71
37 38 2.890311 CGGAGCATATTCTCTGTCCTCT 59.110 50.000 3.25 0.00 35.32 3.69
38 39 3.320541 CGGAGCATATTCTCTGTCCTCTT 59.679 47.826 3.25 0.00 35.32 2.85
39 40 4.202202 CGGAGCATATTCTCTGTCCTCTTT 60.202 45.833 3.25 0.00 35.32 2.52
40 41 5.679601 GGAGCATATTCTCTGTCCTCTTTT 58.320 41.667 2.33 0.00 33.70 2.27
41 42 5.757808 GGAGCATATTCTCTGTCCTCTTTTC 59.242 44.000 2.33 0.00 33.70 2.29
42 43 6.407979 GGAGCATATTCTCTGTCCTCTTTTCT 60.408 42.308 2.33 0.00 33.70 2.52
43 44 6.581712 AGCATATTCTCTGTCCTCTTTTCTC 58.418 40.000 0.00 0.00 0.00 2.87
44 45 5.461737 GCATATTCTCTGTCCTCTTTTCTCG 59.538 44.000 0.00 0.00 0.00 4.04
45 46 3.305398 TTCTCTGTCCTCTTTTCTCGC 57.695 47.619 0.00 0.00 0.00 5.03
46 47 1.546476 TCTCTGTCCTCTTTTCTCGCC 59.454 52.381 0.00 0.00 0.00 5.54
47 48 1.273606 CTCTGTCCTCTTTTCTCGCCA 59.726 52.381 0.00 0.00 0.00 5.69
48 49 1.691976 TCTGTCCTCTTTTCTCGCCAA 59.308 47.619 0.00 0.00 0.00 4.52
49 50 1.801178 CTGTCCTCTTTTCTCGCCAAC 59.199 52.381 0.00 0.00 0.00 3.77
50 51 1.140052 TGTCCTCTTTTCTCGCCAACA 59.860 47.619 0.00 0.00 0.00 3.33
51 52 2.218603 GTCCTCTTTTCTCGCCAACAA 58.781 47.619 0.00 0.00 0.00 2.83
52 53 2.224314 GTCCTCTTTTCTCGCCAACAAG 59.776 50.000 0.00 0.00 0.00 3.16
53 54 1.068954 CCTCTTTTCTCGCCAACAAGC 60.069 52.381 0.00 0.00 0.00 4.01
54 55 1.603802 CTCTTTTCTCGCCAACAAGCA 59.396 47.619 0.00 0.00 0.00 3.91
55 56 1.603802 TCTTTTCTCGCCAACAAGCAG 59.396 47.619 0.00 0.00 0.00 4.24
56 57 0.030638 TTTTCTCGCCAACAAGCAGC 59.969 50.000 0.00 0.00 0.00 5.25
57 58 1.100463 TTTCTCGCCAACAAGCAGCA 61.100 50.000 0.00 0.00 0.00 4.41
58 59 1.785041 TTCTCGCCAACAAGCAGCAC 61.785 55.000 0.00 0.00 0.00 4.40
59 60 3.584250 CTCGCCAACAAGCAGCACG 62.584 63.158 0.00 0.00 0.00 5.34
70 71 2.716988 GCAGCACGCTCATTTTGAC 58.283 52.632 0.00 0.00 37.77 3.18
71 72 1.061799 GCAGCACGCTCATTTTGACG 61.062 55.000 0.00 0.00 37.77 4.35
72 73 0.512518 CAGCACGCTCATTTTGACGA 59.487 50.000 0.00 0.00 0.00 4.20
73 74 0.512952 AGCACGCTCATTTTGACGAC 59.487 50.000 0.00 0.00 0.00 4.34
74 75 0.512952 GCACGCTCATTTTGACGACT 59.487 50.000 0.00 0.00 0.00 4.18
75 76 1.722751 GCACGCTCATTTTGACGACTG 60.723 52.381 0.00 0.00 0.00 3.51
76 77 0.512952 ACGCTCATTTTGACGACTGC 59.487 50.000 0.00 0.00 0.00 4.40
77 78 0.517132 CGCTCATTTTGACGACTGCG 60.517 55.000 0.00 0.00 44.79 5.18
88 89 3.119096 GACTGCGTTTCGGGGCTC 61.119 66.667 0.00 0.00 0.00 4.70
97 98 3.219928 TCGGGGCTCGAGCTCATC 61.220 66.667 36.55 20.45 45.20 2.92
98 99 3.222855 CGGGGCTCGAGCTCATCT 61.223 66.667 36.55 0.00 45.20 2.90
99 100 1.899054 CGGGGCTCGAGCTCATCTA 60.899 63.158 36.55 0.00 45.20 1.98
100 101 1.247419 CGGGGCTCGAGCTCATCTAT 61.247 60.000 36.55 0.00 45.20 1.98
101 102 1.840737 GGGGCTCGAGCTCATCTATA 58.159 55.000 36.55 0.00 45.20 1.31
102 103 2.171840 GGGGCTCGAGCTCATCTATAA 58.828 52.381 36.55 0.00 45.20 0.98
103 104 2.763448 GGGGCTCGAGCTCATCTATAAT 59.237 50.000 36.55 0.00 45.20 1.28
104 105 3.181480 GGGGCTCGAGCTCATCTATAATC 60.181 52.174 36.55 13.80 45.20 1.75
105 106 3.181480 GGGCTCGAGCTCATCTATAATCC 60.181 52.174 34.46 19.41 42.27 3.01
106 107 3.181480 GGCTCGAGCTCATCTATAATCCC 60.181 52.174 34.46 10.82 41.70 3.85
107 108 3.699038 GCTCGAGCTCATCTATAATCCCT 59.301 47.826 29.88 0.00 38.21 4.20
108 109 4.202010 GCTCGAGCTCATCTATAATCCCTC 60.202 50.000 29.88 0.00 38.21 4.30
109 110 4.274147 TCGAGCTCATCTATAATCCCTCC 58.726 47.826 15.40 0.00 0.00 4.30
110 111 3.066064 CGAGCTCATCTATAATCCCTCCG 59.934 52.174 15.40 0.00 0.00 4.63
111 112 4.020543 GAGCTCATCTATAATCCCTCCGT 58.979 47.826 9.40 0.00 0.00 4.69
112 113 4.421131 AGCTCATCTATAATCCCTCCGTT 58.579 43.478 0.00 0.00 0.00 4.44
113 114 4.464597 AGCTCATCTATAATCCCTCCGTTC 59.535 45.833 0.00 0.00 0.00 3.95
114 115 4.220821 GCTCATCTATAATCCCTCCGTTCA 59.779 45.833 0.00 0.00 0.00 3.18
115 116 5.715070 CTCATCTATAATCCCTCCGTTCAC 58.285 45.833 0.00 0.00 0.00 3.18
116 117 5.144832 TCATCTATAATCCCTCCGTTCACA 58.855 41.667 0.00 0.00 0.00 3.58
117 118 5.600898 TCATCTATAATCCCTCCGTTCACAA 59.399 40.000 0.00 0.00 0.00 3.33
118 119 5.943349 TCTATAATCCCTCCGTTCACAAA 57.057 39.130 0.00 0.00 0.00 2.83
119 120 6.494666 TCTATAATCCCTCCGTTCACAAAT 57.505 37.500 0.00 0.00 0.00 2.32
120 121 6.288294 TCTATAATCCCTCCGTTCACAAATG 58.712 40.000 0.00 0.00 0.00 2.32
121 122 1.463674 ATCCCTCCGTTCACAAATGC 58.536 50.000 0.00 0.00 0.00 3.56
122 123 0.400213 TCCCTCCGTTCACAAATGCT 59.600 50.000 0.00 0.00 0.00 3.79
123 124 1.626321 TCCCTCCGTTCACAAATGCTA 59.374 47.619 0.00 0.00 0.00 3.49
124 125 2.238646 TCCCTCCGTTCACAAATGCTAT 59.761 45.455 0.00 0.00 0.00 2.97
125 126 3.452990 TCCCTCCGTTCACAAATGCTATA 59.547 43.478 0.00 0.00 0.00 1.31
126 127 4.080807 TCCCTCCGTTCACAAATGCTATAA 60.081 41.667 0.00 0.00 0.00 0.98
127 128 4.273480 CCCTCCGTTCACAAATGCTATAAG 59.727 45.833 0.00 0.00 0.00 1.73
128 129 5.116180 CCTCCGTTCACAAATGCTATAAGA 58.884 41.667 0.00 0.00 0.00 2.10
129 130 5.760253 CCTCCGTTCACAAATGCTATAAGAT 59.240 40.000 0.00 0.00 0.00 2.40
130 131 6.293081 CCTCCGTTCACAAATGCTATAAGATG 60.293 42.308 0.00 0.00 0.00 2.90
131 132 6.112734 TCCGTTCACAAATGCTATAAGATGT 58.887 36.000 0.00 0.00 0.00 3.06
132 133 6.597672 TCCGTTCACAAATGCTATAAGATGTT 59.402 34.615 0.00 0.00 0.00 2.71
133 134 6.688385 CCGTTCACAAATGCTATAAGATGTTG 59.312 38.462 0.00 0.00 0.00 3.33
134 135 7.413988 CCGTTCACAAATGCTATAAGATGTTGA 60.414 37.037 0.00 0.00 0.00 3.18
135 136 7.637519 CGTTCACAAATGCTATAAGATGTTGAG 59.362 37.037 0.00 0.00 0.00 3.02
136 137 8.454106 GTTCACAAATGCTATAAGATGTTGAGT 58.546 33.333 0.00 0.00 0.00 3.41
137 138 9.665719 TTCACAAATGCTATAAGATGTTGAGTA 57.334 29.630 0.00 0.00 0.00 2.59
138 139 9.665719 TCACAAATGCTATAAGATGTTGAGTAA 57.334 29.630 0.00 0.00 0.00 2.24
227 228 6.533367 GCTGACCAAAATGAGTAAACAAACAA 59.467 34.615 0.00 0.00 0.00 2.83
229 230 9.097257 CTGACCAAAATGAGTAAACAAACAAAT 57.903 29.630 0.00 0.00 0.00 2.32
230 231 9.092876 TGACCAAAATGAGTAAACAAACAAATC 57.907 29.630 0.00 0.00 0.00 2.17
231 232 8.125728 ACCAAAATGAGTAAACAAACAAATCG 57.874 30.769 0.00 0.00 0.00 3.34
232 233 7.976734 ACCAAAATGAGTAAACAAACAAATCGA 59.023 29.630 0.00 0.00 0.00 3.59
234 235 9.833894 CAAAATGAGTAAACAAACAAATCGAAG 57.166 29.630 0.00 0.00 0.00 3.79
240 241 5.888412 AAACAAACAAATCGAAGCATGTC 57.112 34.783 0.00 0.00 0.00 3.06
241 242 4.836125 ACAAACAAATCGAAGCATGTCT 57.164 36.364 0.00 0.00 0.00 3.41
242 243 5.940192 ACAAACAAATCGAAGCATGTCTA 57.060 34.783 0.00 0.00 0.00 2.59
243 244 6.500684 ACAAACAAATCGAAGCATGTCTAT 57.499 33.333 0.00 0.00 0.00 1.98
244 245 7.609760 ACAAACAAATCGAAGCATGTCTATA 57.390 32.000 0.00 0.00 0.00 1.31
245 246 8.213518 ACAAACAAATCGAAGCATGTCTATAT 57.786 30.769 0.00 0.00 0.00 0.86
246 247 8.124823 ACAAACAAATCGAAGCATGTCTATATG 58.875 33.333 0.00 0.00 0.00 1.78
309 310 4.518590 GGACGGAGGGAGTAGTAAATAGTC 59.481 50.000 0.00 0.00 33.63 2.59
312 313 5.359292 ACGGAGGGAGTAGTAAATAGTCAAC 59.641 44.000 0.00 0.00 35.77 3.18
333 335 9.459640 GTCAACTAAAAAGGAAATGGTTAGAAC 57.540 33.333 0.00 0.00 0.00 3.01
337 339 8.689061 ACTAAAAAGGAAATGGTTAGAACGTTT 58.311 29.630 0.46 0.00 0.00 3.60
372 384 4.916983 AGCACTGAAAATGCAAAGTGTA 57.083 36.364 14.36 0.00 45.92 2.90
375 387 4.442073 GCACTGAAAATGCAAAGTGTACTG 59.558 41.667 14.36 0.00 42.88 2.74
383 395 1.879380 GCAAAGTGTACTGGATGCACA 59.121 47.619 10.81 0.00 45.74 4.57
385 397 1.795768 AAGTGTACTGGATGCACACG 58.204 50.000 0.00 0.00 45.74 4.49
399 411 1.733389 GCACACGGAATTTCATGGCAG 60.733 52.381 0.00 0.00 0.00 4.85
407 419 4.083110 CGGAATTTCATGGCAGGATGATAC 60.083 45.833 1.35 0.00 39.69 2.24
413 425 2.123018 TGGCAGGATGATACTGGGAT 57.877 50.000 6.82 0.00 39.69 3.85
425 437 1.755179 ACTGGGATGCTCCGAAAATG 58.245 50.000 0.00 0.00 37.43 2.32
430 442 2.356069 GGGATGCTCCGAAAATGAAGAC 59.644 50.000 0.00 0.00 37.43 3.01
436 448 4.278170 TGCTCCGAAAATGAAGACACAATT 59.722 37.500 0.00 0.00 0.00 2.32
438 450 5.117592 GCTCCGAAAATGAAGACACAATTTG 59.882 40.000 0.00 0.00 0.00 2.32
439 451 5.527951 TCCGAAAATGAAGACACAATTTGG 58.472 37.500 0.78 0.00 0.00 3.28
440 452 4.685628 CCGAAAATGAAGACACAATTTGGG 59.314 41.667 0.00 0.00 0.00 4.12
455 469 2.358322 TTGGGTCCGAAGAAAGCTTT 57.642 45.000 12.53 12.53 33.61 3.51
480 494 8.065473 TGAAAATAGGCATTTCTAAGCAATCA 57.935 30.769 10.41 0.00 37.60 2.57
605 620 6.817270 TCGAATTTACTACTCCGCATTTAC 57.183 37.500 0.00 0.00 0.00 2.01
813 829 1.881252 CCGCCGAGGTACCAAATCG 60.881 63.158 15.94 14.58 36.24 3.34
842 861 0.910088 AAACTCCCTCCTTCTCCCCG 60.910 60.000 0.00 0.00 0.00 5.73
843 862 2.108208 AACTCCCTCCTTCTCCCCGT 62.108 60.000 0.00 0.00 0.00 5.28
844 863 1.758906 CTCCCTCCTTCTCCCCGTC 60.759 68.421 0.00 0.00 0.00 4.79
856 875 1.376037 CCCCGTCTCTTGTTCTGCC 60.376 63.158 0.00 0.00 0.00 4.85
862 881 0.033504 TCTCTTGTTCTGCCCACGAC 59.966 55.000 0.00 0.00 0.00 4.34
885 904 1.402852 GCCAAATCCAAGCTCGGTTTC 60.403 52.381 0.00 0.00 0.00 2.78
898 917 2.785713 CGGTTTCCGTCAATTTGGTT 57.214 45.000 0.00 0.00 42.73 3.67
910 929 2.748058 ATTTGGTTCTGGACGCCGCT 62.748 55.000 0.00 0.00 0.00 5.52
916 935 1.019278 TTCTGGACGCCGCTCATTTC 61.019 55.000 0.00 0.00 0.00 2.17
917 936 2.435938 TGGACGCCGCTCATTTCC 60.436 61.111 0.00 0.00 0.00 3.13
930 961 1.194218 CATTTCCCCCTCCGCATTTT 58.806 50.000 0.00 0.00 0.00 1.82
931 962 1.136891 CATTTCCCCCTCCGCATTTTC 59.863 52.381 0.00 0.00 0.00 2.29
944 975 2.120909 ATTTTCATGCCGCCGAGGG 61.121 57.895 0.00 0.00 41.48 4.30
961 992 2.801631 GGCTCCATACTCAGCCGCT 61.802 63.158 0.00 0.00 45.80 5.52
963 1001 0.878086 GCTCCATACTCAGCCGCTTC 60.878 60.000 0.00 0.00 0.00 3.86
966 1004 1.134699 TCCATACTCAGCCGCTTCTTG 60.135 52.381 0.00 0.00 0.00 3.02
968 1006 2.350522 CATACTCAGCCGCTTCTTGTT 58.649 47.619 0.00 0.00 0.00 2.83
970 1008 0.603975 ACTCAGCCGCTTCTTGTTCC 60.604 55.000 0.00 0.00 0.00 3.62
972 1010 2.034221 AGCCGCTTCTTGTTCCCC 59.966 61.111 0.00 0.00 0.00 4.81
979 1017 1.202940 GCTTCTTGTTCCCCCTTGTCT 60.203 52.381 0.00 0.00 0.00 3.41
985 1023 0.537371 GTTCCCCCTTGTCTGTGTGG 60.537 60.000 0.00 0.00 0.00 4.17
988 1026 1.705002 CCCCCTTGTCTGTGTGGTGA 61.705 60.000 0.00 0.00 0.00 4.02
989 1027 0.535102 CCCCTTGTCTGTGTGGTGAC 60.535 60.000 0.00 0.00 0.00 3.67
993 1031 2.632377 CTTGTCTGTGTGGTGACAGTT 58.368 47.619 0.00 0.00 44.46 3.16
995 1033 2.355197 TGTCTGTGTGGTGACAGTTTG 58.645 47.619 0.00 0.00 44.46 2.93
996 1034 1.670811 GTCTGTGTGGTGACAGTTTGG 59.329 52.381 0.00 0.00 44.46 3.28
997 1035 1.557371 TCTGTGTGGTGACAGTTTGGA 59.443 47.619 0.00 0.00 44.46 3.53
998 1036 1.942657 CTGTGTGGTGACAGTTTGGAG 59.057 52.381 0.00 0.00 44.46 3.86
1003 1047 1.774254 TGGTGACAGTTTGGAGGATGT 59.226 47.619 0.00 0.00 35.01 3.06
1017 1061 2.360350 ATGTGCCCTGCAGGTTCG 60.360 61.111 30.63 17.02 40.08 3.95
1019 1063 2.594592 GTGCCCTGCAGGTTCGTT 60.595 61.111 30.63 0.00 40.08 3.85
1020 1064 2.281484 TGCCCTGCAGGTTCGTTC 60.281 61.111 30.63 12.61 38.26 3.95
1022 1066 1.675641 GCCCTGCAGGTTCGTTCAT 60.676 57.895 30.63 0.00 38.26 2.57
1023 1067 1.926511 GCCCTGCAGGTTCGTTCATG 61.927 60.000 30.63 13.31 38.26 3.07
1025 1069 1.308069 CCTGCAGGTTCGTTCATGGG 61.308 60.000 25.53 0.00 0.00 4.00
1026 1070 1.303236 TGCAGGTTCGTTCATGGGG 60.303 57.895 0.00 0.00 0.00 4.96
1027 1071 1.002624 GCAGGTTCGTTCATGGGGA 60.003 57.895 0.00 0.00 0.00 4.81
1028 1072 1.026718 GCAGGTTCGTTCATGGGGAG 61.027 60.000 0.00 0.00 0.00 4.30
1029 1073 0.392998 CAGGTTCGTTCATGGGGAGG 60.393 60.000 0.00 0.00 0.00 4.30
1030 1074 0.840722 AGGTTCGTTCATGGGGAGGT 60.841 55.000 0.00 0.00 0.00 3.85
1074 1118 2.125188 GTGCTCCTGCTGCTCTCC 60.125 66.667 0.00 0.00 40.48 3.71
1080 1124 3.497932 CTGCTGCTCTCCGCTTGC 61.498 66.667 0.00 0.00 40.11 4.01
1090 1134 1.372087 CTCCGCTTGCCATGGAAGAC 61.372 60.000 18.40 10.96 0.00 3.01
1099 1143 1.541233 GCCATGGAAGACGAGGTATGG 60.541 57.143 18.40 0.00 38.42 2.74
1100 1144 1.762957 CCATGGAAGACGAGGTATGGT 59.237 52.381 5.56 0.00 32.44 3.55
1109 1153 3.446516 AGACGAGGTATGGTCTTGGTTAC 59.553 47.826 0.00 0.00 41.22 2.50
1114 1158 5.567430 GAGGTATGGTCTTGGTTACCTTTT 58.433 41.667 2.07 0.00 43.43 2.27
1115 1159 5.567430 AGGTATGGTCTTGGTTACCTTTTC 58.433 41.667 2.07 0.00 41.22 2.29
1119 1163 6.650427 ATGGTCTTGGTTACCTTTTCTTTC 57.350 37.500 2.07 0.00 37.91 2.62
1120 1164 4.891168 TGGTCTTGGTTACCTTTTCTTTCC 59.109 41.667 2.07 0.00 37.91 3.13
1122 1166 5.597182 GGTCTTGGTTACCTTTTCTTTCCTT 59.403 40.000 2.07 0.00 33.97 3.36
1123 1167 6.097839 GGTCTTGGTTACCTTTTCTTTCCTTT 59.902 38.462 2.07 0.00 33.97 3.11
1124 1168 7.364408 GGTCTTGGTTACCTTTTCTTTCCTTTT 60.364 37.037 2.07 0.00 33.97 2.27
1125 1169 8.038944 GTCTTGGTTACCTTTTCTTTCCTTTTT 58.961 33.333 2.07 0.00 0.00 1.94
1126 1170 8.255206 TCTTGGTTACCTTTTCTTTCCTTTTTC 58.745 33.333 2.07 0.00 0.00 2.29
1127 1171 7.727578 TGGTTACCTTTTCTTTCCTTTTTCT 57.272 32.000 2.07 0.00 0.00 2.52
1128 1172 8.141298 TGGTTACCTTTTCTTTCCTTTTTCTT 57.859 30.769 2.07 0.00 0.00 2.52
1129 1173 8.598916 TGGTTACCTTTTCTTTCCTTTTTCTTT 58.401 29.630 2.07 0.00 0.00 2.52
1130 1174 8.879759 GGTTACCTTTTCTTTCCTTTTTCTTTG 58.120 33.333 0.00 0.00 0.00 2.77
1131 1175 6.985188 ACCTTTTCTTTCCTTTTTCTTTGC 57.015 33.333 0.00 0.00 0.00 3.68
1132 1176 5.580691 ACCTTTTCTTTCCTTTTTCTTTGCG 59.419 36.000 0.00 0.00 0.00 4.85
1133 1177 5.810074 CCTTTTCTTTCCTTTTTCTTTGCGA 59.190 36.000 0.00 0.00 0.00 5.10
1134 1178 6.312672 CCTTTTCTTTCCTTTTTCTTTGCGAA 59.687 34.615 0.00 0.00 0.00 4.70
1135 1179 7.148490 CCTTTTCTTTCCTTTTTCTTTGCGAAA 60.148 33.333 0.00 0.00 39.76 3.46
1136 1180 6.641176 TTCTTTCCTTTTTCTTTGCGAAAC 57.359 33.333 0.00 0.00 41.13 2.78
1137 1181 5.715070 TCTTTCCTTTTTCTTTGCGAAACA 58.285 33.333 0.00 0.00 41.13 2.83
1138 1182 6.337356 TCTTTCCTTTTTCTTTGCGAAACAT 58.663 32.000 0.00 0.00 41.13 2.71
1139 1183 7.484975 TCTTTCCTTTTTCTTTGCGAAACATA 58.515 30.769 0.00 0.00 41.13 2.29
1140 1184 7.647715 TCTTTCCTTTTTCTTTGCGAAACATAG 59.352 33.333 0.00 0.00 41.13 2.23
1141 1185 6.385649 TCCTTTTTCTTTGCGAAACATAGT 57.614 33.333 0.00 0.00 41.13 2.12
1142 1186 7.499321 TCCTTTTTCTTTGCGAAACATAGTA 57.501 32.000 0.00 0.00 41.13 1.82
1143 1187 7.932335 TCCTTTTTCTTTGCGAAACATAGTAA 58.068 30.769 0.00 0.00 41.13 2.24
1144 1188 8.073768 TCCTTTTTCTTTGCGAAACATAGTAAG 58.926 33.333 0.00 0.00 41.13 2.34
1145 1189 7.860872 CCTTTTTCTTTGCGAAACATAGTAAGT 59.139 33.333 0.00 0.00 41.13 2.24
1146 1190 9.872757 CTTTTTCTTTGCGAAACATAGTAAGTA 57.127 29.630 0.00 0.00 41.13 2.24
1147 1191 9.872757 TTTTTCTTTGCGAAACATAGTAAGTAG 57.127 29.630 0.00 0.00 41.13 2.57
1148 1192 8.821147 TTTCTTTGCGAAACATAGTAAGTAGA 57.179 30.769 0.00 0.00 36.72 2.59
1149 1193 8.821147 TTCTTTGCGAAACATAGTAAGTAGAA 57.179 30.769 0.00 0.00 0.00 2.10
1150 1194 8.236084 TCTTTGCGAAACATAGTAAGTAGAAC 57.764 34.615 0.00 0.00 0.00 3.01
1151 1195 7.868922 TCTTTGCGAAACATAGTAAGTAGAACA 59.131 33.333 0.00 0.00 0.00 3.18
1152 1196 8.542497 TTTGCGAAACATAGTAAGTAGAACAT 57.458 30.769 0.00 0.00 0.00 2.71
1153 1197 9.642327 TTTGCGAAACATAGTAAGTAGAACATA 57.358 29.630 0.00 0.00 0.00 2.29
1154 1198 9.811995 TTGCGAAACATAGTAAGTAGAACATAT 57.188 29.630 0.00 0.00 0.00 1.78
1155 1199 9.459640 TGCGAAACATAGTAAGTAGAACATATC 57.540 33.333 0.00 0.00 0.00 1.63
1156 1200 9.459640 GCGAAACATAGTAAGTAGAACATATCA 57.540 33.333 0.00 0.00 0.00 2.15
1164 1208 8.462143 AGTAAGTAGAACATATCACAAACGTG 57.538 34.615 0.00 0.00 35.60 4.49
1165 1209 5.779806 AGTAGAACATATCACAAACGTGC 57.220 39.130 0.00 0.00 34.20 5.34
1166 1210 5.479306 AGTAGAACATATCACAAACGTGCT 58.521 37.500 0.00 0.00 34.20 4.40
1167 1211 5.932303 AGTAGAACATATCACAAACGTGCTT 59.068 36.000 0.00 0.00 34.20 3.91
1168 1212 5.283060 AGAACATATCACAAACGTGCTTC 57.717 39.130 0.00 0.00 34.20 3.86
1169 1213 3.722555 ACATATCACAAACGTGCTTCG 57.277 42.857 0.00 0.84 46.00 3.79
1170 1214 2.415168 ACATATCACAAACGTGCTTCGG 59.585 45.455 0.00 0.00 44.69 4.30
1171 1215 2.157834 TATCACAAACGTGCTTCGGT 57.842 45.000 0.00 0.00 44.69 4.69
1177 1221 3.383092 AACGTGCTTCGGTTACCAA 57.617 47.368 1.13 0.00 44.69 3.67
1178 1222 1.886886 AACGTGCTTCGGTTACCAAT 58.113 45.000 1.13 0.00 44.69 3.16
1179 1223 1.886886 ACGTGCTTCGGTTACCAATT 58.113 45.000 1.13 0.00 44.69 2.32
1180 1224 2.223745 ACGTGCTTCGGTTACCAATTT 58.776 42.857 1.13 0.00 44.69 1.82
1181 1225 2.619646 ACGTGCTTCGGTTACCAATTTT 59.380 40.909 1.13 0.00 44.69 1.82
1182 1226 2.977169 CGTGCTTCGGTTACCAATTTTG 59.023 45.455 1.13 0.00 35.71 2.44
1183 1227 3.304123 CGTGCTTCGGTTACCAATTTTGA 60.304 43.478 1.13 0.00 35.71 2.69
1184 1228 4.614993 CGTGCTTCGGTTACCAATTTTGAT 60.615 41.667 1.13 0.00 35.71 2.57
1185 1229 4.621034 GTGCTTCGGTTACCAATTTTGATG 59.379 41.667 1.13 0.00 0.00 3.07
1186 1230 3.612423 GCTTCGGTTACCAATTTTGATGC 59.388 43.478 1.13 0.00 0.00 3.91
1187 1231 4.618227 GCTTCGGTTACCAATTTTGATGCT 60.618 41.667 1.13 0.00 0.00 3.79
1188 1232 5.461032 TTCGGTTACCAATTTTGATGCTT 57.539 34.783 1.13 0.00 0.00 3.91
1189 1233 4.804108 TCGGTTACCAATTTTGATGCTTG 58.196 39.130 1.13 0.00 0.00 4.01
1190 1234 3.367630 CGGTTACCAATTTTGATGCTTGC 59.632 43.478 1.13 0.00 0.00 4.01
1200 1244 0.675083 TGATGCTTGCTTGTTGGGTG 59.325 50.000 0.00 0.00 0.00 4.61
1244 1288 7.860373 TCAAATGAATTTCCAAGAACGTGTTAG 59.140 33.333 0.00 0.00 0.00 2.34
1294 1338 5.748402 ACTGAATTCATTCTGACTGCCATA 58.252 37.500 8.96 0.00 38.58 2.74
1298 1342 8.750515 TGAATTCATTCTGACTGCCATAATTA 57.249 30.769 3.38 0.00 37.67 1.40
1366 1410 2.486191 GGTGTAATCATGCAGGGAGAGG 60.486 54.545 0.00 0.00 0.00 3.69
1446 1490 2.040213 CTGATTGCCTGTTAGCCGCG 62.040 60.000 0.00 0.00 0.00 6.46
1462 1506 2.639286 CGCACTGGCCAACAACTC 59.361 61.111 7.01 0.00 36.38 3.01
1477 1521 5.343058 CCAACAACTCAACTAATTGAATGCG 59.657 40.000 0.72 0.00 44.28 4.73
1587 1631 0.465460 GGTGGCTGACAGTTGGAACA 60.465 55.000 3.99 0.00 0.00 3.18
1608 1652 2.675658 ACCTGGTGCCTTGTTAACAT 57.324 45.000 9.56 0.00 0.00 2.71
1611 1655 3.824443 ACCTGGTGCCTTGTTAACATAAC 59.176 43.478 9.56 5.65 0.00 1.89
1652 1697 4.010349 GGTTGGTCACCTCCAGAAAATAG 58.990 47.826 0.00 0.00 43.29 1.73
1656 1701 4.597507 TGGTCACCTCCAGAAAATAGAAGT 59.402 41.667 0.00 0.00 33.19 3.01
1678 1723 7.409465 AGTGTTGAATTAAGAAGAACGAGTC 57.591 36.000 0.00 0.00 0.00 3.36
1692 1740 1.080093 GAGTCGATGAACCGTGGCA 60.080 57.895 0.00 0.00 0.00 4.92
1701 1749 2.406452 GAACCGTGGCAGGCAAACAG 62.406 60.000 0.00 0.00 33.69 3.16
1831 1879 6.433716 TGATTCACAGCAAAAGACCATCATAA 59.566 34.615 0.00 0.00 0.00 1.90
1832 1880 5.627499 TCACAGCAAAAGACCATCATAAC 57.373 39.130 0.00 0.00 0.00 1.89
2243 2308 6.808008 TTGTTCAATTTGTTTTTCTTGGCA 57.192 29.167 0.00 0.00 0.00 4.92
2375 2444 4.388469 GCAGAGTTCTCTGTCAAGAATCAC 59.612 45.833 24.56 6.41 37.59 3.06
2377 2446 3.919216 AGTTCTCTGTCAAGAATCACGG 58.081 45.455 0.00 0.00 37.59 4.94
2443 2512 3.933332 GAGTATGCTTCGGCTGTAAGTTT 59.067 43.478 0.00 0.00 42.37 2.66
2657 2727 8.206867 CCAACTGTTCTCTTCCATTCATATCTA 58.793 37.037 0.00 0.00 0.00 1.98
2658 2728 9.039870 CAACTGTTCTCTTCCATTCATATCTAC 57.960 37.037 0.00 0.00 0.00 2.59
2659 2729 8.546083 ACTGTTCTCTTCCATTCATATCTACT 57.454 34.615 0.00 0.00 0.00 2.57
2660 2730 8.637986 ACTGTTCTCTTCCATTCATATCTACTC 58.362 37.037 0.00 0.00 0.00 2.59
2661 2731 7.957002 TGTTCTCTTCCATTCATATCTACTCC 58.043 38.462 0.00 0.00 0.00 3.85
2662 2732 7.015682 TGTTCTCTTCCATTCATATCTACTCCC 59.984 40.741 0.00 0.00 0.00 4.30
2663 2733 6.868826 TCTCTTCCATTCATATCTACTCCCT 58.131 40.000 0.00 0.00 0.00 4.20
2664 2734 6.951198 TCTCTTCCATTCATATCTACTCCCTC 59.049 42.308 0.00 0.00 0.00 4.30
2665 2735 6.019748 TCTTCCATTCATATCTACTCCCTCC 58.980 44.000 0.00 0.00 0.00 4.30
2666 2736 4.344978 TCCATTCATATCTACTCCCTCCG 58.655 47.826 0.00 0.00 0.00 4.63
2667 2737 4.090090 CCATTCATATCTACTCCCTCCGT 58.910 47.826 0.00 0.00 0.00 4.69
2668 2738 4.158764 CCATTCATATCTACTCCCTCCGTC 59.841 50.000 0.00 0.00 0.00 4.79
2669 2739 3.436577 TCATATCTACTCCCTCCGTCC 57.563 52.381 0.00 0.00 0.00 4.79
2670 2740 2.041350 TCATATCTACTCCCTCCGTCCC 59.959 54.545 0.00 0.00 0.00 4.46
2671 2741 1.526315 TATCTACTCCCTCCGTCCCA 58.474 55.000 0.00 0.00 0.00 4.37
2672 2742 0.635009 ATCTACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
2673 2743 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
2674 2744 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
2675 2745 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
2676 2746 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2677 2747 2.271777 ACTCCCTCCGTCCCAAAATTA 58.728 47.619 0.00 0.00 0.00 1.40
2678 2748 2.850568 ACTCCCTCCGTCCCAAAATTAT 59.149 45.455 0.00 0.00 0.00 1.28
2679 2749 3.268595 ACTCCCTCCGTCCCAAAATTATT 59.731 43.478 0.00 0.00 0.00 1.40
2680 2750 3.626930 TCCCTCCGTCCCAAAATTATTG 58.373 45.455 0.00 0.00 0.00 1.90
2681 2751 3.010808 TCCCTCCGTCCCAAAATTATTGT 59.989 43.478 0.00 0.00 0.00 2.71
2682 2752 3.380320 CCCTCCGTCCCAAAATTATTGTC 59.620 47.826 0.00 0.00 0.00 3.18
2683 2753 4.270008 CCTCCGTCCCAAAATTATTGTCT 58.730 43.478 0.00 0.00 0.00 3.41
2684 2754 4.705023 CCTCCGTCCCAAAATTATTGTCTT 59.295 41.667 0.00 0.00 0.00 3.01
2685 2755 5.883673 CCTCCGTCCCAAAATTATTGTCTTA 59.116 40.000 0.00 0.00 0.00 2.10
2686 2756 6.376018 CCTCCGTCCCAAAATTATTGTCTTAA 59.624 38.462 0.00 0.00 0.00 1.85
2687 2757 7.094118 CCTCCGTCCCAAAATTATTGTCTTAAA 60.094 37.037 0.00 0.00 0.00 1.52
2688 2758 8.356000 TCCGTCCCAAAATTATTGTCTTAAAT 57.644 30.769 0.00 0.00 0.00 1.40
2689 2759 8.808092 TCCGTCCCAAAATTATTGTCTTAAATT 58.192 29.630 0.00 0.00 0.00 1.82
2690 2760 9.430623 CCGTCCCAAAATTATTGTCTTAAATTT 57.569 29.630 0.00 0.00 35.01 1.82
2705 2775 9.529325 TGTCTTAAATTTGTCTAGATACGGATG 57.471 33.333 0.00 0.00 0.00 3.51
2706 2776 9.530633 GTCTTAAATTTGTCTAGATACGGATGT 57.469 33.333 0.00 0.00 0.00 3.06
2709 2779 9.754382 TTAAATTTGTCTAGATACGGATGTACC 57.246 33.333 0.00 0.00 32.26 3.34
2710 2780 7.598759 AATTTGTCTAGATACGGATGTACCT 57.401 36.000 0.00 0.00 36.31 3.08
2711 2781 8.701908 AATTTGTCTAGATACGGATGTACCTA 57.298 34.615 0.00 0.00 36.31 3.08
2712 2782 8.701908 ATTTGTCTAGATACGGATGTACCTAA 57.298 34.615 0.00 0.00 36.31 2.69
2713 2783 8.701908 TTTGTCTAGATACGGATGTACCTAAT 57.298 34.615 0.00 0.00 36.31 1.73
2714 2784 9.797642 TTTGTCTAGATACGGATGTACCTAATA 57.202 33.333 0.00 0.00 36.31 0.98
2715 2785 8.783833 TGTCTAGATACGGATGTACCTAATAC 57.216 38.462 0.00 0.00 36.31 1.89
2716 2786 8.600668 TGTCTAGATACGGATGTACCTAATACT 58.399 37.037 0.00 0.00 34.56 2.12
2722 2792 9.334693 GATACGGATGTACCTAATACTAAAACG 57.665 37.037 0.00 0.00 34.56 3.60
2723 2793 7.100458 ACGGATGTACCTAATACTAAAACGT 57.900 36.000 0.00 0.00 34.56 3.99
2724 2794 6.974622 ACGGATGTACCTAATACTAAAACGTG 59.025 38.462 0.00 0.00 34.56 4.49
2725 2795 7.148086 ACGGATGTACCTAATACTAAAACGTGA 60.148 37.037 0.00 0.00 34.56 4.35
2726 2796 7.166473 CGGATGTACCTAATACTAAAACGTGAC 59.834 40.741 0.00 0.00 34.56 3.67
2727 2797 8.193438 GGATGTACCTAATACTAAAACGTGACT 58.807 37.037 0.00 0.00 34.56 3.41
2728 2798 9.578439 GATGTACCTAATACTAAAACGTGACTT 57.422 33.333 0.00 0.00 34.56 3.01
2729 2799 8.746922 TGTACCTAATACTAAAACGTGACTTG 57.253 34.615 0.00 0.00 34.56 3.16
2730 2800 8.575589 TGTACCTAATACTAAAACGTGACTTGA 58.424 33.333 0.00 0.00 34.56 3.02
2731 2801 9.578439 GTACCTAATACTAAAACGTGACTTGAT 57.422 33.333 0.00 0.00 0.00 2.57
2733 2803 9.578439 ACCTAATACTAAAACGTGACTTGATAC 57.422 33.333 0.00 0.00 0.00 2.24
2734 2804 9.577110 CCTAATACTAAAACGTGACTTGATACA 57.423 33.333 0.00 0.00 0.00 2.29
2737 2807 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
2738 2808 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
2739 2809 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
2740 2810 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
2741 2811 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
2742 2812 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
2743 2813 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
2744 2814 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
2745 2815 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
2746 2816 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
2747 2817 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
2748 2818 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
2749 2819 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
2750 2820 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
2751 2821 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
2758 2828 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
2759 2829 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
2761 2831 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
2762 2832 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
2770 2840 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2771 2841 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2772 2842 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2773 2843 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2774 2844 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2775 2845 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2776 2846 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2777 2847 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2778 2848 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2779 2849 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2780 2850 1.282157 AGAATTTTGGGACGGAGGGAG 59.718 52.381 0.00 0.00 0.00 4.30
2781 2851 1.004394 GAATTTTGGGACGGAGGGAGT 59.996 52.381 0.00 0.00 0.00 3.85
3052 3122 8.986991 AGTTGTCATAAATTTGGGGCATATTTA 58.013 29.630 0.00 0.00 34.02 1.40
3094 3164 6.097412 ACTTTTCATGATATGGCCTTCCTTTC 59.903 38.462 3.32 0.00 0.00 2.62
3574 3651 4.927267 AAGAAATATGGGGATATCGGCA 57.073 40.909 0.00 0.00 0.00 5.69
3696 3773 6.644347 TCAATGTCCAGACTCTTAATTCCTC 58.356 40.000 0.00 0.00 0.00 3.71
3859 5375 1.006571 TTTCGGACAGCCTCGTGTC 60.007 57.895 0.00 0.00 45.30 3.67
4075 5600 5.966636 TTATCGCTGTGTTATGCTTAGTG 57.033 39.130 0.00 0.00 0.00 2.74
4101 5626 7.391554 GCTTGCTCATATTTTAGGTATGGATCA 59.608 37.037 0.00 0.00 31.88 2.92
4197 5722 1.294659 GAGCACAGACCTTCCTTGCG 61.295 60.000 0.00 0.00 38.26 4.85
4231 5756 5.906113 TGTCTCTTTAGCTCCTAGTTCTG 57.094 43.478 0.00 0.00 0.00 3.02
4783 6312 6.587206 TTGAGAACATTGCCATGAAATGTA 57.413 33.333 20.37 8.07 45.25 2.29
4785 6314 6.798482 TGAGAACATTGCCATGAAATGTATC 58.202 36.000 20.37 19.83 45.25 2.24
4786 6315 6.604396 TGAGAACATTGCCATGAAATGTATCT 59.396 34.615 20.37 21.11 45.25 1.98
4787 6316 7.774625 TGAGAACATTGCCATGAAATGTATCTA 59.225 33.333 20.37 12.47 45.25 1.98
4788 6317 7.934457 AGAACATTGCCATGAAATGTATCTAC 58.066 34.615 20.37 12.68 45.25 2.59
4789 6318 7.776969 AGAACATTGCCATGAAATGTATCTACT 59.223 33.333 20.37 13.97 45.25 2.57
4790 6319 8.978874 AACATTGCCATGAAATGTATCTACTA 57.021 30.769 20.37 0.00 45.25 1.82
4791 6320 8.613060 ACATTGCCATGAAATGTATCTACTAG 57.387 34.615 19.29 0.00 44.41 2.57
4792 6321 8.432013 ACATTGCCATGAAATGTATCTACTAGA 58.568 33.333 19.29 0.00 44.41 2.43
4793 6322 9.445878 CATTGCCATGAAATGTATCTACTAGAT 57.554 33.333 0.00 3.99 44.81 1.98
4794 6323 8.837788 TTGCCATGAAATGTATCTACTAGATG 57.162 34.615 8.62 0.00 44.81 2.90
4795 6324 7.966812 TGCCATGAAATGTATCTACTAGATGT 58.033 34.615 8.62 0.00 44.81 3.06
4796 6325 8.432013 TGCCATGAAATGTATCTACTAGATGTT 58.568 33.333 8.62 0.00 44.81 2.71
4797 6326 9.277783 GCCATGAAATGTATCTACTAGATGTTT 57.722 33.333 8.62 7.07 44.81 2.83
4886 6415 6.097412 ACTTGAGAAAAAGAGGCAAATTCTGT 59.903 34.615 0.00 0.00 30.89 3.41
4960 6490 9.000018 GCAGTTAGAACGAAAACATTCATATTC 58.000 33.333 0.00 0.00 0.00 1.75
5093 6623 9.243105 TGGACAAAAGGAAAAATCCTCTAATAG 57.757 33.333 0.00 0.00 39.65 1.73
5133 6664 5.406649 ACAACTCTTTTTCGATGCACAAAA 58.593 33.333 0.00 0.00 0.00 2.44
5176 6707 9.429109 AAAAACCAAAGAAAACCTTATCCTAGA 57.571 29.630 0.00 0.00 34.00 2.43
5191 6722 9.640963 CCTTATCCTAGACGATAAATACAAAGG 57.359 37.037 0.00 0.00 34.98 3.11
5272 6803 3.087031 CAGATTCCCAGCAGTTGAACAT 58.913 45.455 0.00 0.00 0.00 2.71
5307 6839 4.376008 CGCAATACGGTATGTGATAAGTGC 60.376 45.833 0.58 4.51 38.44 4.40
5384 6916 2.039405 CACAAGCCTGGCTGAGAGC 61.039 63.158 24.16 0.00 39.62 4.09
5389 6921 2.901813 CCTGGCTGAGAGCAGAGG 59.098 66.667 0.00 0.00 44.75 3.69
5402 6934 0.324943 GCAGAGGGCTGGTCTGTAAA 59.675 55.000 11.78 0.00 43.00 2.01
5407 6939 1.493022 AGGGCTGGTCTGTAAACACAA 59.507 47.619 0.00 0.00 0.00 3.33
5408 6940 1.880027 GGGCTGGTCTGTAAACACAAG 59.120 52.381 0.00 0.00 0.00 3.16
5409 6941 1.266989 GGCTGGTCTGTAAACACAAGC 59.733 52.381 0.00 0.00 0.00 4.01
5410 6942 1.266989 GCTGGTCTGTAAACACAAGCC 59.733 52.381 0.00 0.00 0.00 4.35
5411 6943 2.851195 CTGGTCTGTAAACACAAGCCT 58.149 47.619 0.00 0.00 0.00 4.58
5412 6944 2.549754 CTGGTCTGTAAACACAAGCCTG 59.450 50.000 0.00 0.00 0.00 4.85
5413 6945 1.880027 GGTCTGTAAACACAAGCCTGG 59.120 52.381 0.00 0.00 0.00 4.45
5414 6946 1.266989 GTCTGTAAACACAAGCCTGGC 59.733 52.381 11.65 11.65 0.00 4.85
5415 6947 1.133945 TCTGTAAACACAAGCCTGGCA 60.134 47.619 22.65 0.00 0.00 4.92
5416 6948 1.267806 CTGTAAACACAAGCCTGGCAG 59.732 52.381 22.65 15.30 0.00 4.85
5417 6949 0.039165 GTAAACACAAGCCTGGCAGC 60.039 55.000 22.65 4.82 0.00 5.25
5418 6950 1.514678 TAAACACAAGCCTGGCAGCG 61.515 55.000 22.65 10.88 38.01 5.18
5432 6964 4.367023 AGCGCTGCCCGTTCGTAA 62.367 61.111 10.39 0.00 39.71 3.18
5433 6965 3.416382 GCGCTGCCCGTTCGTAAA 61.416 61.111 0.00 0.00 39.71 2.01
5434 6966 2.776072 CGCTGCCCGTTCGTAAAG 59.224 61.111 0.00 0.00 0.00 1.85
5435 6967 2.736682 CGCTGCCCGTTCGTAAAGG 61.737 63.158 0.00 0.00 0.00 3.11
5436 6968 3.035576 GCTGCCCGTTCGTAAAGGC 62.036 63.158 0.00 0.00 45.96 4.35
5437 6969 2.358984 TGCCCGTTCGTAAAGGCC 60.359 61.111 0.00 0.00 45.14 5.19
5438 6970 2.358984 GCCCGTTCGTAAAGGCCA 60.359 61.111 5.01 0.00 39.60 5.36
5439 6971 1.747745 GCCCGTTCGTAAAGGCCAT 60.748 57.895 5.01 0.00 39.60 4.40
5440 6972 1.712018 GCCCGTTCGTAAAGGCCATC 61.712 60.000 5.01 0.00 39.60 3.51
5441 6973 0.391927 CCCGTTCGTAAAGGCCATCA 60.392 55.000 5.01 0.00 0.00 3.07
5442 6974 1.444836 CCGTTCGTAAAGGCCATCAA 58.555 50.000 5.01 0.00 0.00 2.57
5443 6975 1.807742 CCGTTCGTAAAGGCCATCAAA 59.192 47.619 5.01 0.00 0.00 2.69
5444 6976 2.422127 CCGTTCGTAAAGGCCATCAAAT 59.578 45.455 5.01 0.00 0.00 2.32
5445 6977 3.119637 CCGTTCGTAAAGGCCATCAAATT 60.120 43.478 5.01 0.00 0.00 1.82
5446 6978 4.095610 CGTTCGTAAAGGCCATCAAATTC 58.904 43.478 5.01 0.00 0.00 2.17
5447 6979 4.378978 CGTTCGTAAAGGCCATCAAATTCA 60.379 41.667 5.01 0.00 0.00 2.57
5448 6980 5.465935 GTTCGTAAAGGCCATCAAATTCAA 58.534 37.500 5.01 0.00 0.00 2.69
5449 6981 5.713792 TCGTAAAGGCCATCAAATTCAAA 57.286 34.783 5.01 0.00 0.00 2.69
5450 6982 5.465935 TCGTAAAGGCCATCAAATTCAAAC 58.534 37.500 5.01 0.00 0.00 2.93
5451 6983 4.625311 CGTAAAGGCCATCAAATTCAAACC 59.375 41.667 5.01 0.00 0.00 3.27
5452 6984 4.980339 AAAGGCCATCAAATTCAAACCT 57.020 36.364 5.01 0.00 0.00 3.50
5453 6985 3.967332 AGGCCATCAAATTCAAACCTG 57.033 42.857 5.01 0.00 0.00 4.00
5454 6986 2.027837 AGGCCATCAAATTCAAACCTGC 60.028 45.455 5.01 0.00 0.00 4.85
5455 6987 2.349590 GCCATCAAATTCAAACCTGCC 58.650 47.619 0.00 0.00 0.00 4.85
5456 6988 2.027837 GCCATCAAATTCAAACCTGCCT 60.028 45.455 0.00 0.00 0.00 4.75
5457 6989 3.592059 CCATCAAATTCAAACCTGCCTG 58.408 45.455 0.00 0.00 0.00 4.85
5458 6990 3.007182 CCATCAAATTCAAACCTGCCTGT 59.993 43.478 0.00 0.00 0.00 4.00
5459 6991 4.503643 CCATCAAATTCAAACCTGCCTGTT 60.504 41.667 0.00 0.00 0.00 3.16
5460 6992 5.279406 CCATCAAATTCAAACCTGCCTGTTA 60.279 40.000 0.00 0.00 0.00 2.41
5461 6993 6.400568 CATCAAATTCAAACCTGCCTGTTAT 58.599 36.000 0.00 0.00 0.00 1.89
5462 6994 7.363705 CCATCAAATTCAAACCTGCCTGTTATA 60.364 37.037 0.00 0.00 0.00 0.98
5463 6995 7.716799 TCAAATTCAAACCTGCCTGTTATAT 57.283 32.000 0.00 0.00 0.00 0.86
5464 6996 8.133024 TCAAATTCAAACCTGCCTGTTATATT 57.867 30.769 0.00 0.00 0.00 1.28
5465 6997 8.592809 TCAAATTCAAACCTGCCTGTTATATTT 58.407 29.630 0.00 0.00 0.00 1.40
5466 6998 8.658609 CAAATTCAAACCTGCCTGTTATATTTG 58.341 33.333 0.00 0.00 31.62 2.32
5467 6999 5.323371 TCAAACCTGCCTGTTATATTTGC 57.677 39.130 0.00 0.00 0.00 3.68
5468 7000 4.159506 TCAAACCTGCCTGTTATATTTGCC 59.840 41.667 0.00 0.00 0.00 4.52
5469 7001 3.380471 ACCTGCCTGTTATATTTGCCA 57.620 42.857 0.00 0.00 0.00 4.92
5470 7002 3.290710 ACCTGCCTGTTATATTTGCCAG 58.709 45.455 0.00 0.00 0.00 4.85
5471 7003 2.624838 CCTGCCTGTTATATTTGCCAGG 59.375 50.000 0.00 0.00 45.87 4.45
5472 7004 3.554934 CTGCCTGTTATATTTGCCAGGA 58.445 45.455 8.65 0.00 45.97 3.86
5473 7005 4.147321 CTGCCTGTTATATTTGCCAGGAT 58.853 43.478 8.65 0.00 45.97 3.24
5474 7006 4.144297 TGCCTGTTATATTTGCCAGGATC 58.856 43.478 8.65 0.00 45.97 3.36
5475 7007 4.141181 TGCCTGTTATATTTGCCAGGATCT 60.141 41.667 8.65 0.00 45.97 2.75
5476 7008 4.217118 GCCTGTTATATTTGCCAGGATCTG 59.783 45.833 8.65 0.00 45.97 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.142292 AATATGCTCCGGCCCCCATC 62.142 60.000 0.00 0.00 37.74 3.51
8 9 2.142292 GAATATGCTCCGGCCCCCAT 62.142 60.000 0.00 0.00 37.74 4.00
9 10 2.776526 AATATGCTCCGGCCCCCA 60.777 61.111 0.00 0.00 37.74 4.96
10 11 2.034221 GAATATGCTCCGGCCCCC 59.966 66.667 0.00 0.00 37.74 5.40
11 12 1.003233 GAGAATATGCTCCGGCCCC 60.003 63.158 0.00 0.00 37.74 5.80
12 13 0.321122 CAGAGAATATGCTCCGGCCC 60.321 60.000 7.13 0.00 35.49 5.80
13 14 0.394565 ACAGAGAATATGCTCCGGCC 59.605 55.000 7.13 0.00 35.49 6.13
14 15 1.606737 GGACAGAGAATATGCTCCGGC 60.607 57.143 7.13 0.00 35.49 6.13
15 16 1.967066 AGGACAGAGAATATGCTCCGG 59.033 52.381 7.13 0.00 35.49 5.14
16 17 2.890311 AGAGGACAGAGAATATGCTCCG 59.110 50.000 7.13 0.00 35.49 4.63
17 18 4.953940 AAGAGGACAGAGAATATGCTCC 57.046 45.455 7.13 0.00 35.49 4.70
18 19 6.581712 AGAAAAGAGGACAGAGAATATGCTC 58.418 40.000 1.96 1.96 35.11 4.26
19 20 6.558488 AGAAAAGAGGACAGAGAATATGCT 57.442 37.500 0.00 0.00 0.00 3.79
20 21 5.461737 CGAGAAAAGAGGACAGAGAATATGC 59.538 44.000 0.00 0.00 0.00 3.14
21 22 5.461737 GCGAGAAAAGAGGACAGAGAATATG 59.538 44.000 0.00 0.00 0.00 1.78
22 23 5.452636 GGCGAGAAAAGAGGACAGAGAATAT 60.453 44.000 0.00 0.00 0.00 1.28
23 24 4.142138 GGCGAGAAAAGAGGACAGAGAATA 60.142 45.833 0.00 0.00 0.00 1.75
24 25 3.368948 GGCGAGAAAAGAGGACAGAGAAT 60.369 47.826 0.00 0.00 0.00 2.40
25 26 2.028930 GGCGAGAAAAGAGGACAGAGAA 60.029 50.000 0.00 0.00 0.00 2.87
26 27 1.546476 GGCGAGAAAAGAGGACAGAGA 59.454 52.381 0.00 0.00 0.00 3.10
27 28 1.273606 TGGCGAGAAAAGAGGACAGAG 59.726 52.381 0.00 0.00 0.00 3.35
28 29 1.338107 TGGCGAGAAAAGAGGACAGA 58.662 50.000 0.00 0.00 0.00 3.41
29 30 1.801178 GTTGGCGAGAAAAGAGGACAG 59.199 52.381 0.00 0.00 0.00 3.51
30 31 1.140052 TGTTGGCGAGAAAAGAGGACA 59.860 47.619 0.00 0.00 0.00 4.02
31 32 1.878953 TGTTGGCGAGAAAAGAGGAC 58.121 50.000 0.00 0.00 0.00 3.85
32 33 2.494059 CTTGTTGGCGAGAAAAGAGGA 58.506 47.619 0.00 0.00 0.00 3.71
33 34 1.068954 GCTTGTTGGCGAGAAAAGAGG 60.069 52.381 0.00 0.00 0.00 3.69
34 35 1.603802 TGCTTGTTGGCGAGAAAAGAG 59.396 47.619 0.00 0.00 34.52 2.85
35 36 1.603802 CTGCTTGTTGGCGAGAAAAGA 59.396 47.619 0.00 0.00 34.52 2.52
36 37 1.927710 GCTGCTTGTTGGCGAGAAAAG 60.928 52.381 0.00 0.00 34.52 2.27
37 38 0.030638 GCTGCTTGTTGGCGAGAAAA 59.969 50.000 0.00 0.00 34.52 2.29
38 39 1.100463 TGCTGCTTGTTGGCGAGAAA 61.100 50.000 0.00 0.00 34.52 2.52
39 40 1.525765 TGCTGCTTGTTGGCGAGAA 60.526 52.632 0.00 0.00 34.52 2.87
40 41 2.110835 TGCTGCTTGTTGGCGAGA 59.889 55.556 0.00 0.00 34.52 4.04
41 42 2.253452 GTGCTGCTTGTTGGCGAG 59.747 61.111 0.00 0.00 34.52 5.03
42 43 3.648982 CGTGCTGCTTGTTGGCGA 61.649 61.111 0.00 0.00 34.52 5.54
52 53 1.061799 CGTCAAAATGAGCGTGCTGC 61.062 55.000 0.00 0.00 46.98 5.25
53 54 0.512518 TCGTCAAAATGAGCGTGCTG 59.487 50.000 0.00 0.00 0.00 4.41
54 55 0.512952 GTCGTCAAAATGAGCGTGCT 59.487 50.000 0.00 0.00 0.00 4.40
55 56 0.512952 AGTCGTCAAAATGAGCGTGC 59.487 50.000 0.00 0.00 0.00 5.34
56 57 1.722751 GCAGTCGTCAAAATGAGCGTG 60.723 52.381 0.00 0.00 0.00 5.34
57 58 0.512952 GCAGTCGTCAAAATGAGCGT 59.487 50.000 0.00 0.00 0.00 5.07
58 59 0.517132 CGCAGTCGTCAAAATGAGCG 60.517 55.000 0.00 0.00 37.91 5.03
59 60 3.280532 CGCAGTCGTCAAAATGAGC 57.719 52.632 0.00 0.00 0.00 4.26
71 72 3.119096 GAGCCCCGAAACGCAGTC 61.119 66.667 0.00 0.00 45.00 3.51
73 74 4.735132 TCGAGCCCCGAAACGCAG 62.735 66.667 0.00 0.00 45.43 5.18
80 81 2.339275 TAGATGAGCTCGAGCCCCGA 62.339 60.000 32.94 15.16 46.35 5.14
81 82 1.247419 ATAGATGAGCTCGAGCCCCG 61.247 60.000 32.94 0.00 43.38 5.73
82 83 1.840737 TATAGATGAGCTCGAGCCCC 58.159 55.000 32.94 24.42 43.38 5.80
83 84 3.181480 GGATTATAGATGAGCTCGAGCCC 60.181 52.174 32.94 23.52 43.38 5.19
84 85 3.181480 GGGATTATAGATGAGCTCGAGCC 60.181 52.174 32.94 23.66 43.38 4.70
85 86 3.699038 AGGGATTATAGATGAGCTCGAGC 59.301 47.826 30.01 30.01 42.49 5.03
86 87 4.338118 GGAGGGATTATAGATGAGCTCGAG 59.662 50.000 8.45 8.45 0.00 4.04
87 88 4.274147 GGAGGGATTATAGATGAGCTCGA 58.726 47.826 9.64 0.00 0.00 4.04
88 89 3.066064 CGGAGGGATTATAGATGAGCTCG 59.934 52.174 9.64 0.00 0.00 5.03
89 90 4.020543 ACGGAGGGATTATAGATGAGCTC 58.979 47.826 6.82 6.82 0.00 4.09
90 91 4.054359 ACGGAGGGATTATAGATGAGCT 57.946 45.455 0.00 0.00 0.00 4.09
91 92 4.220821 TGAACGGAGGGATTATAGATGAGC 59.779 45.833 0.00 0.00 0.00 4.26
92 93 5.243954 TGTGAACGGAGGGATTATAGATGAG 59.756 44.000 0.00 0.00 0.00 2.90
93 94 5.144832 TGTGAACGGAGGGATTATAGATGA 58.855 41.667 0.00 0.00 0.00 2.92
94 95 5.468540 TGTGAACGGAGGGATTATAGATG 57.531 43.478 0.00 0.00 0.00 2.90
95 96 6.494666 TTTGTGAACGGAGGGATTATAGAT 57.505 37.500 0.00 0.00 0.00 1.98
96 97 5.943349 TTTGTGAACGGAGGGATTATAGA 57.057 39.130 0.00 0.00 0.00 1.98
97 98 5.049405 GCATTTGTGAACGGAGGGATTATAG 60.049 44.000 0.00 0.00 0.00 1.31
98 99 4.819630 GCATTTGTGAACGGAGGGATTATA 59.180 41.667 0.00 0.00 0.00 0.98
99 100 3.632145 GCATTTGTGAACGGAGGGATTAT 59.368 43.478 0.00 0.00 0.00 1.28
100 101 3.013921 GCATTTGTGAACGGAGGGATTA 58.986 45.455 0.00 0.00 0.00 1.75
101 102 1.818674 GCATTTGTGAACGGAGGGATT 59.181 47.619 0.00 0.00 0.00 3.01
102 103 1.004745 AGCATTTGTGAACGGAGGGAT 59.995 47.619 0.00 0.00 0.00 3.85
103 104 0.400213 AGCATTTGTGAACGGAGGGA 59.600 50.000 0.00 0.00 0.00 4.20
104 105 2.107950 TAGCATTTGTGAACGGAGGG 57.892 50.000 0.00 0.00 0.00 4.30
105 106 5.116180 TCTTATAGCATTTGTGAACGGAGG 58.884 41.667 0.00 0.00 0.00 4.30
106 107 6.258727 ACATCTTATAGCATTTGTGAACGGAG 59.741 38.462 0.00 0.00 0.00 4.63
107 108 6.112734 ACATCTTATAGCATTTGTGAACGGA 58.887 36.000 0.00 0.00 0.00 4.69
108 109 6.363577 ACATCTTATAGCATTTGTGAACGG 57.636 37.500 0.00 0.00 0.00 4.44
109 110 7.463544 TCAACATCTTATAGCATTTGTGAACG 58.536 34.615 0.00 0.00 0.00 3.95
110 111 8.454106 ACTCAACATCTTATAGCATTTGTGAAC 58.546 33.333 0.00 0.00 0.00 3.18
111 112 8.565896 ACTCAACATCTTATAGCATTTGTGAA 57.434 30.769 0.00 0.00 0.00 3.18
112 113 9.665719 TTACTCAACATCTTATAGCATTTGTGA 57.334 29.630 0.00 0.00 0.00 3.58
191 192 9.113838 ACTCATTTTGGTCAGCATATAGTTTAG 57.886 33.333 0.00 0.00 0.00 1.85
201 202 5.843673 TTGTTTACTCATTTTGGTCAGCA 57.156 34.783 0.00 0.00 0.00 4.41
202 203 6.039616 TGTTTGTTTACTCATTTTGGTCAGC 58.960 36.000 0.00 0.00 0.00 4.26
203 204 8.472683 TTTGTTTGTTTACTCATTTTGGTCAG 57.527 30.769 0.00 0.00 0.00 3.51
204 205 9.092876 GATTTGTTTGTTTACTCATTTTGGTCA 57.907 29.630 0.00 0.00 0.00 4.02
205 206 8.265998 CGATTTGTTTGTTTACTCATTTTGGTC 58.734 33.333 0.00 0.00 0.00 4.02
218 219 5.591099 AGACATGCTTCGATTTGTTTGTTT 58.409 33.333 0.00 0.00 0.00 2.83
240 241 9.125026 ACCTTTTTCTAAACCAGATGCATATAG 57.875 33.333 0.00 0.00 31.77 1.31
241 242 9.474313 AACCTTTTTCTAAACCAGATGCATATA 57.526 29.630 0.00 0.00 31.77 0.86
242 243 7.961326 ACCTTTTTCTAAACCAGATGCATAT 57.039 32.000 0.00 0.00 31.77 1.78
243 244 7.775053 AACCTTTTTCTAAACCAGATGCATA 57.225 32.000 0.00 0.00 31.77 3.14
244 245 6.670695 AACCTTTTTCTAAACCAGATGCAT 57.329 33.333 0.00 0.00 31.77 3.96
245 246 7.589958 TTAACCTTTTTCTAAACCAGATGCA 57.410 32.000 0.00 0.00 31.77 3.96
246 247 8.761497 GTTTTAACCTTTTTCTAAACCAGATGC 58.239 33.333 0.00 0.00 31.77 3.91
247 248 9.810545 TGTTTTAACCTTTTTCTAAACCAGATG 57.189 29.630 0.00 0.00 31.77 2.90
264 265 9.498307 CGTCCACAAATATAAGATGTTTTAACC 57.502 33.333 0.00 0.00 0.00 2.85
276 277 4.035112 ACTCCCTCCGTCCACAAATATAA 58.965 43.478 0.00 0.00 0.00 0.98
284 285 2.134789 TTACTACTCCCTCCGTCCAC 57.865 55.000 0.00 0.00 0.00 4.02
287 288 5.128919 TGACTATTTACTACTCCCTCCGTC 58.871 45.833 0.00 0.00 0.00 4.79
309 310 8.132995 ACGTTCTAACCATTTCCTTTTTAGTTG 58.867 33.333 0.00 0.00 0.00 3.16
350 352 4.916983 ACACTTTGCATTTTCAGTGCTA 57.083 36.364 9.27 0.00 42.92 3.49
356 367 5.771469 CATCCAGTACACTTTGCATTTTCA 58.229 37.500 0.00 0.00 0.00 2.69
372 384 1.812571 GAAATTCCGTGTGCATCCAGT 59.187 47.619 0.00 0.00 0.00 4.00
375 387 2.480073 CCATGAAATTCCGTGTGCATCC 60.480 50.000 0.00 0.00 0.00 3.51
383 395 2.026641 CATCCTGCCATGAAATTCCGT 58.973 47.619 0.00 0.00 0.00 4.69
385 397 5.048224 CAGTATCATCCTGCCATGAAATTCC 60.048 44.000 0.00 0.00 36.36 3.01
413 425 2.844946 TGTGTCTTCATTTTCGGAGCA 58.155 42.857 0.00 0.00 0.00 4.26
425 437 2.500229 TCGGACCCAAATTGTGTCTTC 58.500 47.619 8.38 0.00 0.00 2.87
430 442 3.857010 GCTTTCTTCGGACCCAAATTGTG 60.857 47.826 0.00 0.00 0.00 3.33
436 448 1.953686 CAAAGCTTTCTTCGGACCCAA 59.046 47.619 9.23 0.00 0.00 4.12
438 450 1.892209 TCAAAGCTTTCTTCGGACCC 58.108 50.000 9.23 0.00 0.00 4.46
439 451 3.982576 TTTCAAAGCTTTCTTCGGACC 57.017 42.857 9.23 0.00 0.00 4.46
440 452 6.086871 CCTATTTTCAAAGCTTTCTTCGGAC 58.913 40.000 9.23 0.00 0.00 4.79
455 469 8.065473 TGATTGCTTAGAAATGCCTATTTTCA 57.935 30.769 0.00 0.00 36.66 2.69
480 494 6.284459 TCCGTGGTGCTTTGAAAATTAAAAT 58.716 32.000 0.00 0.00 0.00 1.82
594 609 0.815615 GCTCCCCTGTAAATGCGGAG 60.816 60.000 0.00 0.00 42.57 4.63
599 614 3.474600 CTCATCTGCTCCCCTGTAAATG 58.525 50.000 0.00 0.00 0.00 2.32
605 620 3.644719 AGCTCATCTGCTCCCCTG 58.355 61.111 0.00 0.00 39.34 4.45
655 670 1.745653 CGGAAGGGAAGATGGAAAAGC 59.254 52.381 0.00 0.00 0.00 3.51
725 741 1.695597 ATTGGAGCTGGAGGGGGAG 60.696 63.158 0.00 0.00 0.00 4.30
726 742 1.694169 GATTGGAGCTGGAGGGGGA 60.694 63.158 0.00 0.00 0.00 4.81
727 743 2.761465 GGATTGGAGCTGGAGGGGG 61.761 68.421 0.00 0.00 0.00 5.40
813 829 1.307953 AGGGAGTTTAGGGGAGGGC 60.308 63.158 0.00 0.00 0.00 5.19
842 861 0.033504 TCGTGGGCAGAACAAGAGAC 59.966 55.000 0.00 0.00 0.00 3.36
843 862 0.033504 GTCGTGGGCAGAACAAGAGA 59.966 55.000 0.00 0.00 0.00 3.10
844 863 0.034059 AGTCGTGGGCAGAACAAGAG 59.966 55.000 0.00 0.00 0.00 2.85
856 875 0.953471 TTGGATTTGGCGAGTCGTGG 60.953 55.000 15.08 0.00 0.00 4.94
862 881 1.709147 CCGAGCTTGGATTTGGCGAG 61.709 60.000 15.76 0.00 0.00 5.03
885 904 1.196808 CGTCCAGAACCAAATTGACGG 59.803 52.381 0.00 0.00 41.19 4.79
898 917 1.447838 GAAATGAGCGGCGTCCAGA 60.448 57.895 9.37 0.00 0.00 3.86
910 929 0.334676 AAATGCGGAGGGGGAAATGA 59.665 50.000 0.00 0.00 0.00 2.57
916 935 2.019897 GCATGAAAATGCGGAGGGGG 62.020 60.000 0.00 0.00 37.84 5.40
917 936 1.438814 GCATGAAAATGCGGAGGGG 59.561 57.895 0.00 0.00 37.84 4.79
944 975 0.878086 GAAGCGGCTGAGTATGGAGC 60.878 60.000 1.81 0.00 34.23 4.70
945 976 0.749649 AGAAGCGGCTGAGTATGGAG 59.250 55.000 1.81 0.00 0.00 3.86
949 980 2.622436 GAACAAGAAGCGGCTGAGTAT 58.378 47.619 1.81 0.00 0.00 2.12
950 981 1.337823 GGAACAAGAAGCGGCTGAGTA 60.338 52.381 1.81 0.00 0.00 2.59
958 989 0.537371 ACAAGGGGGAACAAGAAGCG 60.537 55.000 0.00 0.00 0.00 4.68
959 990 1.202940 AGACAAGGGGGAACAAGAAGC 60.203 52.381 0.00 0.00 0.00 3.86
961 992 1.850345 ACAGACAAGGGGGAACAAGAA 59.150 47.619 0.00 0.00 0.00 2.52
963 1001 1.133792 ACACAGACAAGGGGGAACAAG 60.134 52.381 0.00 0.00 0.00 3.16
966 1004 0.537371 CCACACAGACAAGGGGGAAC 60.537 60.000 0.00 0.00 0.00 3.62
968 1006 1.385347 ACCACACAGACAAGGGGGA 60.385 57.895 0.00 0.00 0.00 4.81
970 1008 0.535102 GTCACCACACAGACAAGGGG 60.535 60.000 0.00 0.00 34.93 4.79
972 1010 1.134401 ACTGTCACCACACAGACAAGG 60.134 52.381 7.59 0.00 45.92 3.61
979 1017 1.408127 CCTCCAAACTGTCACCACACA 60.408 52.381 0.00 0.00 0.00 3.72
985 1023 1.537202 GCACATCCTCCAAACTGTCAC 59.463 52.381 0.00 0.00 0.00 3.67
988 1026 0.251341 GGGCACATCCTCCAAACTGT 60.251 55.000 0.00 0.00 34.39 3.55
989 1027 0.038744 AGGGCACATCCTCCAAACTG 59.961 55.000 0.00 0.00 29.56 3.16
993 1031 2.356278 GCAGGGCACATCCTCCAA 59.644 61.111 0.00 0.00 34.31 3.53
995 1033 2.124403 CTGCAGGGCACATCCTCC 60.124 66.667 5.57 0.00 34.31 4.30
996 1034 2.124403 CCTGCAGGGCACATCCTC 60.124 66.667 26.14 0.00 34.31 3.71
997 1035 2.490270 GAACCTGCAGGGCACATCCT 62.490 60.000 35.42 10.21 40.27 3.24
998 1036 2.036256 AACCTGCAGGGCACATCC 59.964 61.111 35.42 0.00 40.27 3.51
1003 1047 2.281484 GAACGAACCTGCAGGGCA 60.281 61.111 35.42 0.00 40.27 5.36
1017 1061 1.609783 CCTCCACCTCCCCATGAAC 59.390 63.158 0.00 0.00 0.00 3.18
1019 1063 2.692368 GCCTCCACCTCCCCATGA 60.692 66.667 0.00 0.00 0.00 3.07
1020 1064 4.181010 CGCCTCCACCTCCCCATG 62.181 72.222 0.00 0.00 0.00 3.66
1053 1097 2.926779 AGCAGCAGGAGCACCAGA 60.927 61.111 2.07 0.00 45.49 3.86
1074 1118 1.699656 CTCGTCTTCCATGGCAAGCG 61.700 60.000 6.96 16.92 0.00 4.68
1080 1124 1.762957 ACCATACCTCGTCTTCCATGG 59.237 52.381 4.97 4.97 39.07 3.66
1090 1134 2.764572 AGGTAACCAAGACCATACCTCG 59.235 50.000 0.00 0.00 43.56 4.63
1099 1143 6.710597 AAGGAAAGAAAAGGTAACCAAGAC 57.289 37.500 0.00 0.00 37.17 3.01
1100 1144 7.727578 AAAAGGAAAGAAAAGGTAACCAAGA 57.272 32.000 0.00 0.00 37.17 3.02
1103 1147 7.727578 AGAAAAAGGAAAGAAAAGGTAACCA 57.272 32.000 0.00 0.00 37.17 3.67
1105 1149 8.388103 GCAAAGAAAAAGGAAAGAAAAGGTAAC 58.612 33.333 0.00 0.00 0.00 2.50
1109 1153 5.810074 TCGCAAAGAAAAAGGAAAGAAAAGG 59.190 36.000 0.00 0.00 0.00 3.11
1123 1167 8.821147 TCTACTTACTATGTTTCGCAAAGAAA 57.179 30.769 0.00 0.00 45.76 2.52
1124 1168 8.706035 GTTCTACTTACTATGTTTCGCAAAGAA 58.294 33.333 0.00 0.00 37.01 2.52
1125 1169 7.868922 TGTTCTACTTACTATGTTTCGCAAAGA 59.131 33.333 0.00 0.00 0.00 2.52
1126 1170 8.014322 TGTTCTACTTACTATGTTTCGCAAAG 57.986 34.615 0.00 0.00 0.00 2.77
1127 1171 7.949903 TGTTCTACTTACTATGTTTCGCAAA 57.050 32.000 0.00 0.00 0.00 3.68
1128 1172 9.811995 ATATGTTCTACTTACTATGTTTCGCAA 57.188 29.630 0.00 0.00 0.00 4.85
1129 1173 9.459640 GATATGTTCTACTTACTATGTTTCGCA 57.540 33.333 0.00 0.00 0.00 5.10
1130 1174 9.459640 TGATATGTTCTACTTACTATGTTTCGC 57.540 33.333 0.00 0.00 0.00 4.70
1141 1185 7.601130 AAGCACGTTTGTGATATGTTCTACTTA 59.399 33.333 0.00 0.00 45.67 2.24
1142 1186 6.426937 AAGCACGTTTGTGATATGTTCTACTT 59.573 34.615 0.00 0.00 45.67 2.24
1143 1187 5.932303 AAGCACGTTTGTGATATGTTCTACT 59.068 36.000 0.00 0.00 45.67 2.57
1144 1188 6.165659 AAGCACGTTTGTGATATGTTCTAC 57.834 37.500 0.00 0.00 45.67 2.59
1145 1189 5.061684 CGAAGCACGTTTGTGATATGTTCTA 59.938 40.000 0.00 0.00 45.67 2.10
1146 1190 4.143115 CGAAGCACGTTTGTGATATGTTCT 60.143 41.667 0.00 0.00 45.67 3.01
1147 1191 4.081761 CGAAGCACGTTTGTGATATGTTC 58.918 43.478 0.00 0.00 45.67 3.18
1148 1192 3.120338 CCGAAGCACGTTTGTGATATGTT 60.120 43.478 0.00 0.00 45.67 2.71
1149 1193 2.415168 CCGAAGCACGTTTGTGATATGT 59.585 45.455 0.00 0.00 45.67 2.29
1150 1194 2.415168 ACCGAAGCACGTTTGTGATATG 59.585 45.455 0.00 0.00 45.67 1.78
1151 1195 2.695359 ACCGAAGCACGTTTGTGATAT 58.305 42.857 0.00 0.00 45.67 1.63
1152 1196 2.157834 ACCGAAGCACGTTTGTGATA 57.842 45.000 0.00 0.00 45.67 2.15
1156 1200 0.939419 GGTAACCGAAGCACGTTTGT 59.061 50.000 0.00 0.00 40.78 2.83
1157 1201 0.938713 TGGTAACCGAAGCACGTTTG 59.061 50.000 0.00 0.00 40.78 2.93
1158 1202 1.666054 TTGGTAACCGAAGCACGTTT 58.334 45.000 0.00 0.00 40.78 3.60
1159 1203 1.886886 ATTGGTAACCGAAGCACGTT 58.113 45.000 0.00 0.00 40.78 3.99
1160 1204 1.886886 AATTGGTAACCGAAGCACGT 58.113 45.000 3.00 0.00 40.78 4.49
1161 1205 2.977169 CAAAATTGGTAACCGAAGCACG 59.023 45.455 0.00 0.00 42.18 5.34
1162 1206 4.231718 TCAAAATTGGTAACCGAAGCAC 57.768 40.909 0.00 0.00 0.00 4.40
1163 1207 4.804108 CATCAAAATTGGTAACCGAAGCA 58.196 39.130 0.00 0.00 0.00 3.91
1164 1208 3.612423 GCATCAAAATTGGTAACCGAAGC 59.388 43.478 0.00 0.00 0.00 3.86
1165 1209 5.059404 AGCATCAAAATTGGTAACCGAAG 57.941 39.130 0.00 0.00 0.00 3.79
1166 1210 5.226396 CAAGCATCAAAATTGGTAACCGAA 58.774 37.500 0.00 0.00 0.00 4.30
1167 1211 4.804108 CAAGCATCAAAATTGGTAACCGA 58.196 39.130 0.00 0.00 0.00 4.69
1168 1212 3.367630 GCAAGCATCAAAATTGGTAACCG 59.632 43.478 0.00 0.00 0.00 4.44
1169 1213 4.568956 AGCAAGCATCAAAATTGGTAACC 58.431 39.130 0.00 0.00 33.22 2.85
1170 1214 5.466393 ACAAGCAAGCATCAAAATTGGTAAC 59.534 36.000 0.00 0.00 33.82 2.50
1171 1215 5.609423 ACAAGCAAGCATCAAAATTGGTAA 58.391 33.333 0.00 0.00 33.82 2.85
1172 1216 5.212532 ACAAGCAAGCATCAAAATTGGTA 57.787 34.783 0.00 0.00 33.82 3.25
1173 1217 4.075963 ACAAGCAAGCATCAAAATTGGT 57.924 36.364 0.00 0.00 36.29 3.67
1174 1218 4.319911 CCAACAAGCAAGCATCAAAATTGG 60.320 41.667 0.00 0.00 0.00 3.16
1175 1219 4.319911 CCCAACAAGCAAGCATCAAAATTG 60.320 41.667 0.00 0.00 0.00 2.32
1176 1220 3.816523 CCCAACAAGCAAGCATCAAAATT 59.183 39.130 0.00 0.00 0.00 1.82
1177 1221 3.181452 ACCCAACAAGCAAGCATCAAAAT 60.181 39.130 0.00 0.00 0.00 1.82
1178 1222 2.170187 ACCCAACAAGCAAGCATCAAAA 59.830 40.909 0.00 0.00 0.00 2.44
1179 1223 1.761784 ACCCAACAAGCAAGCATCAAA 59.238 42.857 0.00 0.00 0.00 2.69
1180 1224 1.068895 CACCCAACAAGCAAGCATCAA 59.931 47.619 0.00 0.00 0.00 2.57
1181 1225 0.675083 CACCCAACAAGCAAGCATCA 59.325 50.000 0.00 0.00 0.00 3.07
1182 1226 0.961019 TCACCCAACAAGCAAGCATC 59.039 50.000 0.00 0.00 0.00 3.91
1183 1227 0.675633 GTCACCCAACAAGCAAGCAT 59.324 50.000 0.00 0.00 0.00 3.79
1184 1228 0.395586 AGTCACCCAACAAGCAAGCA 60.396 50.000 0.00 0.00 0.00 3.91
1185 1229 0.031178 CAGTCACCCAACAAGCAAGC 59.969 55.000 0.00 0.00 0.00 4.01
1186 1230 1.392589 ACAGTCACCCAACAAGCAAG 58.607 50.000 0.00 0.00 0.00 4.01
1187 1231 1.748493 GAACAGTCACCCAACAAGCAA 59.252 47.619 0.00 0.00 0.00 3.91
1188 1232 1.064758 AGAACAGTCACCCAACAAGCA 60.065 47.619 0.00 0.00 0.00 3.91
1189 1233 1.680338 AGAACAGTCACCCAACAAGC 58.320 50.000 0.00 0.00 0.00 4.01
1190 1234 4.451900 ACTTAGAACAGTCACCCAACAAG 58.548 43.478 0.00 0.00 0.00 3.16
1200 1244 8.154649 TCATTTGAGGAAAACTTAGAACAGTC 57.845 34.615 0.00 0.00 0.00 3.51
1229 1273 5.543714 TGAATTAGCTAACACGTTCTTGGA 58.456 37.500 8.70 0.00 0.00 3.53
1244 1288 2.329379 CCCGATCGCTACTGAATTAGC 58.671 52.381 10.32 0.00 41.06 3.09
1298 1342 7.280428 CACTGACATTCATCTTATGCTTTCTCT 59.720 37.037 0.00 0.00 0.00 3.10
1336 1380 6.222389 CCTGCATGATTACACCTTTTGAAAA 58.778 36.000 0.00 0.00 0.00 2.29
1384 1428 1.813513 CAGGGCAATTTCGTCAGTCT 58.186 50.000 0.00 0.00 0.00 3.24
1385 1429 0.169009 GCAGGGCAATTTCGTCAGTC 59.831 55.000 0.00 0.00 0.00 3.51
1446 1490 0.249031 GTTGAGTTGTTGGCCAGTGC 60.249 55.000 5.11 0.78 0.00 4.40
1462 1506 5.156355 ACAAGAAGCGCATTCAATTAGTTG 58.844 37.500 11.47 11.57 40.67 3.16
1477 1521 1.536709 CCAGCCACAACAACAAGAAGC 60.537 52.381 0.00 0.00 0.00 3.86
1587 1631 3.799432 TGTTAACAAGGCACCAGGTAT 57.201 42.857 5.64 0.00 0.00 2.73
1608 1652 4.634004 CCATATGCAACCAGAACTTCGTTA 59.366 41.667 0.00 0.00 0.00 3.18
1611 1655 3.009723 ACCATATGCAACCAGAACTTCG 58.990 45.455 0.00 0.00 0.00 3.79
1652 1697 7.852516 ACTCGTTCTTCTTAATTCAACACTTC 58.147 34.615 0.00 0.00 0.00 3.01
1656 1701 6.210796 TCGACTCGTTCTTCTTAATTCAACA 58.789 36.000 0.00 0.00 0.00 3.33
1678 1723 3.499737 GCCTGCCACGGTTCATCG 61.500 66.667 0.00 0.00 0.00 3.84
1701 1749 3.545703 AGCTCCACAACAGTATAATGGC 58.454 45.455 5.03 0.00 0.00 4.40
1707 1755 4.067896 CAAGTCAAGCTCCACAACAGTAT 58.932 43.478 0.00 0.00 0.00 2.12
1831 1879 2.363359 CAAGCCAAGCTCCAAAAGAAGT 59.637 45.455 0.00 0.00 38.25 3.01
1832 1880 2.624838 TCAAGCCAAGCTCCAAAAGAAG 59.375 45.455 0.00 0.00 38.25 2.85
2126 2174 8.303876 ACAAGTTCACTTTGATTAAGTTTGTGT 58.696 29.630 0.00 0.00 44.73 3.72
2243 2308 6.400568 CCAAAGCAGATGGACAAACATTTAT 58.599 36.000 0.00 0.00 40.56 1.40
2490 2559 6.823689 TCAAGACAAAGACAAACTAAAGCTCT 59.176 34.615 0.00 0.00 0.00 4.09
2502 2572 8.506168 ACTTAACAAGATTCAAGACAAAGACA 57.494 30.769 0.00 0.00 0.00 3.41
2629 2699 4.389374 TGAATGGAAGAGAACAGTTGGAC 58.611 43.478 0.00 0.00 0.00 4.02
2657 2727 1.073098 AATTTTGGGACGGAGGGAGT 58.927 50.000 0.00 0.00 0.00 3.85
2658 2728 3.577805 ATAATTTTGGGACGGAGGGAG 57.422 47.619 0.00 0.00 0.00 4.30
2659 2729 3.010808 ACAATAATTTTGGGACGGAGGGA 59.989 43.478 0.00 0.00 0.00 4.20
2660 2730 3.361786 ACAATAATTTTGGGACGGAGGG 58.638 45.455 0.00 0.00 0.00 4.30
2661 2731 4.270008 AGACAATAATTTTGGGACGGAGG 58.730 43.478 0.00 0.00 0.00 4.30
2662 2732 5.897377 AAGACAATAATTTTGGGACGGAG 57.103 39.130 0.00 0.00 0.00 4.63
2663 2733 7.762588 TTTAAGACAATAATTTTGGGACGGA 57.237 32.000 0.00 0.00 0.00 4.69
2664 2734 8.996024 AATTTAAGACAATAATTTTGGGACGG 57.004 30.769 0.00 0.00 0.00 4.79
2679 2749 9.529325 CATCCGTATCTAGACAAATTTAAGACA 57.471 33.333 0.00 0.00 0.00 3.41
2680 2750 9.530633 ACATCCGTATCTAGACAAATTTAAGAC 57.469 33.333 0.00 0.00 0.00 3.01
2683 2753 9.754382 GGTACATCCGTATCTAGACAAATTTAA 57.246 33.333 0.00 0.00 0.00 1.52
2684 2754 9.139734 AGGTACATCCGTATCTAGACAAATTTA 57.860 33.333 0.00 0.00 37.29 1.40
2685 2755 8.019656 AGGTACATCCGTATCTAGACAAATTT 57.980 34.615 0.00 0.00 37.29 1.82
2686 2756 7.598759 AGGTACATCCGTATCTAGACAAATT 57.401 36.000 0.00 0.00 37.29 1.82
2687 2757 8.701908 TTAGGTACATCCGTATCTAGACAAAT 57.298 34.615 0.00 0.00 41.33 2.32
2688 2758 8.701908 ATTAGGTACATCCGTATCTAGACAAA 57.298 34.615 0.00 0.00 41.33 2.83
2689 2759 9.224267 GTATTAGGTACATCCGTATCTAGACAA 57.776 37.037 0.00 0.00 41.33 3.18
2690 2760 8.600668 AGTATTAGGTACATCCGTATCTAGACA 58.399 37.037 0.00 0.00 41.33 3.41
2696 2766 9.334693 CGTTTTAGTATTAGGTACATCCGTATC 57.665 37.037 0.00 0.00 41.99 2.24
2697 2767 8.850156 ACGTTTTAGTATTAGGTACATCCGTAT 58.150 33.333 0.00 0.00 41.99 3.06
2698 2768 8.128582 CACGTTTTAGTATTAGGTACATCCGTA 58.871 37.037 0.00 0.00 41.99 4.02
2699 2769 6.974622 CACGTTTTAGTATTAGGTACATCCGT 59.025 38.462 0.00 0.00 41.99 4.69
2700 2770 7.166473 GTCACGTTTTAGTATTAGGTACATCCG 59.834 40.741 0.00 0.00 41.99 4.18
2701 2771 8.193438 AGTCACGTTTTAGTATTAGGTACATCC 58.807 37.037 0.00 0.00 35.67 3.51
2702 2772 9.578439 AAGTCACGTTTTAGTATTAGGTACATC 57.422 33.333 0.00 0.00 35.67 3.06
2703 2773 9.362539 CAAGTCACGTTTTAGTATTAGGTACAT 57.637 33.333 0.00 0.00 35.67 2.29
2704 2774 8.575589 TCAAGTCACGTTTTAGTATTAGGTACA 58.424 33.333 0.00 0.00 35.67 2.90
2705 2775 8.970691 TCAAGTCACGTTTTAGTATTAGGTAC 57.029 34.615 0.00 0.00 0.00 3.34
2707 2777 9.578439 GTATCAAGTCACGTTTTAGTATTAGGT 57.422 33.333 0.00 0.00 0.00 3.08
2708 2778 9.577110 TGTATCAAGTCACGTTTTAGTATTAGG 57.423 33.333 0.00 0.00 0.00 2.69
2711 2781 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
2712 2782 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
2713 2783 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
2714 2784 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
2715 2785 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
2716 2786 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
2717 2787 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
2718 2788 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
2719 2789 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
2720 2790 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
2721 2791 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
2722 2792 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
2723 2793 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
2724 2794 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
2725 2795 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
2732 2802 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
2733 2803 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
2735 2805 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
2736 2806 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
2744 2814 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2745 2815 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2746 2816 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2747 2817 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2748 2818 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2749 2819 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2750 2820 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2751 2821 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2752 2822 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2753 2823 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2754 2824 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2755 2825 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2756 2826 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2757 2827 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2758 2828 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2759 2829 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2760 2830 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2761 2831 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2762 2832 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2763 2833 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2764 2834 1.835531 GATACTCCCTCCGTCCCAAAA 59.164 52.381 0.00 0.00 0.00 2.44
2765 2835 1.007963 AGATACTCCCTCCGTCCCAAA 59.992 52.381 0.00 0.00 0.00 3.28
2766 2836 0.635009 AGATACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
2767 2837 1.424302 CTAGATACTCCCTCCGTCCCA 59.576 57.143 0.00 0.00 0.00 4.37
2768 2838 1.272037 CCTAGATACTCCCTCCGTCCC 60.272 61.905 0.00 0.00 0.00 4.46
2769 2839 1.272037 CCCTAGATACTCCCTCCGTCC 60.272 61.905 0.00 0.00 0.00 4.79
2770 2840 1.272037 CCCCTAGATACTCCCTCCGTC 60.272 61.905 0.00 0.00 0.00 4.79
2771 2841 0.778720 CCCCTAGATACTCCCTCCGT 59.221 60.000 0.00 0.00 0.00 4.69
2772 2842 0.778720 ACCCCTAGATACTCCCTCCG 59.221 60.000 0.00 0.00 0.00 4.63
2773 2843 1.828050 GCACCCCTAGATACTCCCTCC 60.828 61.905 0.00 0.00 0.00 4.30
2774 2844 1.148236 AGCACCCCTAGATACTCCCTC 59.852 57.143 0.00 0.00 0.00 4.30
2775 2845 1.246294 AGCACCCCTAGATACTCCCT 58.754 55.000 0.00 0.00 0.00 4.20
2776 2846 2.104669 AAGCACCCCTAGATACTCCC 57.895 55.000 0.00 0.00 0.00 4.30
2777 2847 5.071923 ACAAATAAGCACCCCTAGATACTCC 59.928 44.000 0.00 0.00 0.00 3.85
2778 2848 6.176014 ACAAATAAGCACCCCTAGATACTC 57.824 41.667 0.00 0.00 0.00 2.59
2779 2849 6.576778 AACAAATAAGCACCCCTAGATACT 57.423 37.500 0.00 0.00 0.00 2.12
2780 2850 7.201794 GGAAAACAAATAAGCACCCCTAGATAC 60.202 40.741 0.00 0.00 0.00 2.24
2781 2851 6.831868 GGAAAACAAATAAGCACCCCTAGATA 59.168 38.462 0.00 0.00 0.00 1.98
2866 2936 0.465097 GGCTGCTGCATATGACACCT 60.465 55.000 17.89 0.00 41.91 4.00
3041 3111 8.730680 CAGTACACTTGATAATAAATATGCCCC 58.269 37.037 0.00 0.00 0.00 5.80
3042 3112 9.502091 TCAGTACACTTGATAATAAATATGCCC 57.498 33.333 0.00 0.00 0.00 5.36
3094 3164 0.744414 CACCCGTAGAATGGCAGGTG 60.744 60.000 5.56 5.56 38.89 4.00
3557 3634 5.608437 ACTATGATGCCGATATCCCCATATT 59.392 40.000 0.00 0.00 0.00 1.28
3574 3651 2.470990 TGAGTGCCCTGTGACTATGAT 58.529 47.619 0.00 0.00 0.00 2.45
3696 3773 3.551846 AGACCGCAATTTATAACCTGGG 58.448 45.455 0.00 4.02 0.00 4.45
3859 5375 2.088178 GGCGAAAACAGCATTGCCG 61.088 57.895 4.70 0.00 36.08 5.69
4075 5600 7.391554 TGATCCATACCTAAAATATGAGCAAGC 59.608 37.037 0.00 0.00 32.66 4.01
4101 5626 2.503331 TGTGTTGCCATCAGATTCGTT 58.497 42.857 0.00 0.00 0.00 3.85
4197 5722 1.889545 AAGAGACAAGCAGTTGAGCC 58.110 50.000 0.00 0.00 37.10 4.70
4208 5733 6.010850 TCAGAACTAGGAGCTAAAGAGACAA 58.989 40.000 0.00 0.00 0.00 3.18
4231 5756 3.594603 ACGATCGATGGGGATAATGTC 57.405 47.619 24.34 0.00 0.00 3.06
4806 6335 9.996554 TGAAACATCTAGTGATTTCAGTTTAGA 57.003 29.630 11.46 0.00 35.20 2.10
4984 6514 7.120726 GGCATGGTTGTACAGACTAAAGTAAAT 59.879 37.037 0.00 0.00 0.00 1.40
5093 6623 6.166982 AGAGTTGTCTTGTAAGTAATCCTGC 58.833 40.000 0.00 0.00 0.00 4.85
5176 6707 4.847990 TCACCCCCTTTGTATTTATCGT 57.152 40.909 0.00 0.00 0.00 3.73
5191 6722 3.144506 TCGACGTATAGAAGATCACCCC 58.855 50.000 0.00 0.00 0.00 4.95
5307 6839 6.202516 TGGGTTTTTGTTGTTTCTACTGAG 57.797 37.500 0.00 0.00 0.00 3.35
5384 6916 1.347707 TGTTTACAGACCAGCCCTCTG 59.652 52.381 2.15 2.15 40.97 3.35
5389 6921 1.266989 GCTTGTGTTTACAGACCAGCC 59.733 52.381 0.00 0.00 38.23 4.85
5415 6947 3.869473 TTTACGAACGGGCAGCGCT 62.869 57.895 2.64 2.64 0.00 5.92
5416 6948 3.362851 CTTTACGAACGGGCAGCGC 62.363 63.158 0.00 0.00 0.00 5.92
5417 6949 2.736682 CCTTTACGAACGGGCAGCG 61.737 63.158 0.00 0.00 0.00 5.18
5418 6950 3.035576 GCCTTTACGAACGGGCAGC 62.036 63.158 7.18 0.00 43.59 5.25
5419 6951 2.396157 GGCCTTTACGAACGGGCAG 61.396 63.158 12.41 0.00 45.68 4.85
5420 6952 2.358984 GGCCTTTACGAACGGGCA 60.359 61.111 12.41 0.00 45.68 5.36
5421 6953 1.712018 GATGGCCTTTACGAACGGGC 61.712 60.000 3.32 8.82 43.42 6.13
5422 6954 0.391927 TGATGGCCTTTACGAACGGG 60.392 55.000 3.32 0.00 0.00 5.28
5423 6955 1.444836 TTGATGGCCTTTACGAACGG 58.555 50.000 3.32 0.00 0.00 4.44
5424 6956 3.757745 ATTTGATGGCCTTTACGAACG 57.242 42.857 3.32 0.00 0.00 3.95
5425 6957 5.054390 TGAATTTGATGGCCTTTACGAAC 57.946 39.130 3.32 0.00 0.00 3.95
5426 6958 5.713792 TTGAATTTGATGGCCTTTACGAA 57.286 34.783 3.32 0.00 0.00 3.85
5427 6959 5.465935 GTTTGAATTTGATGGCCTTTACGA 58.534 37.500 3.32 0.00 0.00 3.43
5428 6960 4.625311 GGTTTGAATTTGATGGCCTTTACG 59.375 41.667 3.32 0.00 0.00 3.18
5429 6961 5.639082 CAGGTTTGAATTTGATGGCCTTTAC 59.361 40.000 3.32 0.00 0.00 2.01
5430 6962 5.792741 CAGGTTTGAATTTGATGGCCTTTA 58.207 37.500 3.32 0.00 0.00 1.85
5431 6963 4.644498 CAGGTTTGAATTTGATGGCCTTT 58.356 39.130 3.32 0.00 0.00 3.11
5432 6964 3.557686 GCAGGTTTGAATTTGATGGCCTT 60.558 43.478 3.32 0.00 0.00 4.35
5433 6965 2.027837 GCAGGTTTGAATTTGATGGCCT 60.028 45.455 3.32 0.00 0.00 5.19
5434 6966 2.349590 GCAGGTTTGAATTTGATGGCC 58.650 47.619 0.00 0.00 0.00 5.36
5435 6967 2.027837 AGGCAGGTTTGAATTTGATGGC 60.028 45.455 0.00 0.00 0.00 4.40
5436 6968 3.007182 ACAGGCAGGTTTGAATTTGATGG 59.993 43.478 0.00 0.00 0.00 3.51
5437 6969 4.261578 ACAGGCAGGTTTGAATTTGATG 57.738 40.909 0.00 0.00 0.00 3.07
5438 6970 4.961438 AACAGGCAGGTTTGAATTTGAT 57.039 36.364 0.00 0.00 0.00 2.57
5439 6971 7.716799 ATATAACAGGCAGGTTTGAATTTGA 57.283 32.000 0.00 0.00 32.29 2.69
5440 6972 8.658609 CAAATATAACAGGCAGGTTTGAATTTG 58.341 33.333 14.36 14.36 32.75 2.32
5441 6973 7.334171 GCAAATATAACAGGCAGGTTTGAATTT 59.666 33.333 0.00 2.88 32.29 1.82
5442 6974 6.818142 GCAAATATAACAGGCAGGTTTGAATT 59.182 34.615 0.00 0.00 32.29 2.17
5443 6975 6.340522 GCAAATATAACAGGCAGGTTTGAAT 58.659 36.000 0.00 0.00 32.29 2.57
5444 6976 5.337169 GGCAAATATAACAGGCAGGTTTGAA 60.337 40.000 0.00 0.00 32.29 2.69
5445 6977 4.159506 GGCAAATATAACAGGCAGGTTTGA 59.840 41.667 0.00 0.00 32.29 2.69
5446 6978 4.081752 TGGCAAATATAACAGGCAGGTTTG 60.082 41.667 0.00 0.00 32.29 2.93
5447 6979 4.093011 TGGCAAATATAACAGGCAGGTTT 58.907 39.130 0.00 0.00 32.29 3.27
5448 6980 3.701040 CTGGCAAATATAACAGGCAGGTT 59.299 43.478 13.83 0.35 46.95 3.50
5449 6981 3.290710 CTGGCAAATATAACAGGCAGGT 58.709 45.455 13.83 0.00 46.95 4.00
5450 6982 3.996150 CTGGCAAATATAACAGGCAGG 57.004 47.619 13.83 0.00 46.95 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.