Multiple sequence alignment - TraesCS2B01G137600

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BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G137600 chr2B 100.000 8782 0 0 1 8782 104571684 104580465 0.000000e+00 16218.0
1 TraesCS2B01G137600 chr2B 78.429 955 149 29 6345 7263 104306783 104307716 3.560000e-158 569.0
2 TraesCS2B01G137600 chr2B 90.385 416 32 4 2246 2659 484609165 484609574 2.790000e-149 540.0
3 TraesCS2B01G137600 chr2B 89.750 400 27 8 2271 2659 579566886 579566490 4.730000e-137 499.0
4 TraesCS2B01G137600 chr2B 83.434 495 69 4 5186 5671 104303965 104304455 1.740000e-121 448.0
5 TraesCS2B01G137600 chr2B 85.397 315 41 5 4170 4482 104303289 104303600 1.100000e-83 322.0
6 TraesCS2B01G137600 chr2B 86.585 246 23 2 5782 6027 104306235 104306470 6.760000e-66 263.0
7 TraesCS2B01G137600 chr2B 94.152 171 8 1 3076 3244 104574690 104574860 8.750000e-65 259.0
8 TraesCS2B01G137600 chr2B 94.152 171 8 1 3007 3177 104574759 104574927 8.750000e-65 259.0
9 TraesCS2B01G137600 chr2B 79.598 348 40 17 1005 1347 104301569 104301890 4.130000e-53 220.0
10 TraesCS2B01G137600 chr2B 94.175 103 4 1 3144 3244 104574691 104574793 1.180000e-33 156.0
11 TraesCS2B01G137600 chr2B 94.175 103 4 1 3008 3110 104574827 104574927 1.180000e-33 156.0
12 TraesCS2B01G137600 chr2B 93.846 65 4 0 7339 7403 52408833 52408769 2.020000e-16 99.0
13 TraesCS2B01G137600 chr2D 95.499 2733 101 8 2294 5019 66874866 66872149 0.000000e+00 4346.0
14 TraesCS2B01G137600 chr2D 92.847 2195 103 17 5185 7337 66872154 66869972 0.000000e+00 3134.0
15 TraesCS2B01G137600 chr2D 93.196 1308 59 17 7486 8775 66869907 66868612 0.000000e+00 1895.0
16 TraesCS2B01G137600 chr2D 91.480 939 53 9 902 1835 66876263 66875347 0.000000e+00 1266.0
17 TraesCS2B01G137600 chr2D 86.854 639 55 21 276 900 66876927 66876304 0.000000e+00 688.0
18 TraesCS2B01G137600 chr2D 91.367 417 29 3 2246 2660 609575100 609574689 1.660000e-156 564.0
19 TraesCS2B01G137600 chr2D 79.971 694 100 19 6510 7173 67194711 67194027 7.980000e-130 475.0
20 TraesCS2B01G137600 chr2D 83.333 498 71 10 5185 5671 67197121 67196625 4.840000e-122 449.0
21 TraesCS2B01G137600 chr2D 87.889 289 29 4 5740 6027 67195809 67195526 1.410000e-87 335.0
22 TraesCS2B01G137600 chr2D 81.616 359 53 10 399 752 67110402 67110052 1.440000e-72 285.0
23 TraesCS2B01G137600 chr2D 96.491 171 4 1 3007 3177 66874079 66873911 1.870000e-71 281.0
24 TraesCS2B01G137600 chr2D 95.322 171 6 1 3076 3244 66874148 66873978 4.040000e-68 270.0
25 TraesCS2B01G137600 chr2D 80.142 282 45 8 330 607 67115328 67115054 5.380000e-47 200.0
26 TraesCS2B01G137600 chr2D 96.154 104 2 1 3007 3110 66874012 66873911 1.520000e-37 169.0
27 TraesCS2B01G137600 chr2D 84.940 166 17 4 6181 6343 67195402 67195242 2.540000e-35 161.0
28 TraesCS2B01G137600 chr2D 97.849 93 2 0 1407 1499 618688399 618688491 2.540000e-35 161.0
29 TraesCS2B01G137600 chr2D 93.204 103 5 1 3144 3244 66874147 66874045 5.490000e-32 150.0
30 TraesCS2B01G137600 chr2D 92.188 64 5 0 7339 7402 649145923 649145860 3.380000e-14 91.6
31 TraesCS2B01G137600 chr2A 92.340 1893 114 17 3146 5017 67709456 67711338 0.000000e+00 2663.0
32 TraesCS2B01G137600 chr2A 91.588 1379 81 18 3146 4503 67970598 67971962 0.000000e+00 1871.0
33 TraesCS2B01G137600 chr2A 91.504 1177 63 17 7628 8775 67979332 67980500 0.000000e+00 1585.0
34 TraesCS2B01G137600 chr2A 93.248 785 39 6 6564 7337 67712567 67713348 0.000000e+00 1144.0
35 TraesCS2B01G137600 chr2A 92.739 785 43 5 6564 7337 67977875 67978656 0.000000e+00 1122.0
36 TraesCS2B01G137600 chr2A 94.378 587 32 1 5185 5771 67711335 67711920 0.000000e+00 900.0
37 TraesCS2B01G137600 chr2A 94.378 587 32 1 5185 5771 67976640 67977225 0.000000e+00 900.0
38 TraesCS2B01G137600 chr2A 90.643 684 28 13 7486 8149 67713413 67714080 0.000000e+00 876.0
39 TraesCS2B01G137600 chr2A 94.656 524 20 2 4503 5019 67976123 67976645 0.000000e+00 806.0
40 TraesCS2B01G137600 chr2A 89.455 550 34 9 880 1416 67969724 67970262 0.000000e+00 673.0
41 TraesCS2B01G137600 chr2A 93.187 455 18 6 2665 3110 67970246 67970696 0.000000e+00 656.0
42 TraesCS2B01G137600 chr2A 90.373 509 27 7 919 1416 67708594 67709091 0.000000e+00 649.0
43 TraesCS2B01G137600 chr2A 92.290 428 23 5 5769 6195 67711969 67712387 4.540000e-167 599.0
44 TraesCS2B01G137600 chr2A 92.075 429 22 10 5769 6195 67977274 67977692 2.110000e-165 593.0
45 TraesCS2B01G137600 chr2A 92.827 237 11 3 2876 3110 67709322 67709554 1.090000e-88 339.0
46 TraesCS2B01G137600 chr2A 80.846 449 64 17 309 751 67568072 67568504 5.080000e-87 333.0
47 TraesCS2B01G137600 chr2A 82.586 379 59 5 6772 7148 67549975 67550348 2.360000e-85 327.0
48 TraesCS2B01G137600 chr2A 95.431 197 9 0 2665 2861 67709075 67709271 1.840000e-81 315.0
49 TraesCS2B01G137600 chr2A 92.778 180 11 2 5004 5182 692697639 692697817 8.750000e-65 259.0
50 TraesCS2B01G137600 chr2A 95.302 149 7 0 7339 7487 67713299 67713447 4.100000e-58 237.0
51 TraesCS2B01G137600 chr2A 79.783 277 47 9 259 531 67706990 67707261 9.000000e-45 193.0
52 TraesCS2B01G137600 chr2A 84.181 177 26 2 432 607 67706895 67707070 4.220000e-38 171.0
53 TraesCS2B01G137600 chr2A 87.013 154 8 5 7486 7633 67978725 67978872 7.050000e-36 163.0
54 TraesCS2B01G137600 chr2A 79.184 245 41 9 259 498 67806831 67807070 2.540000e-35 161.0
55 TraesCS2B01G137600 chr2A 94.949 99 5 0 3079 3177 67709456 67709554 1.180000e-33 156.0
56 TraesCS2B01G137600 chr2A 94.949 99 5 0 3079 3177 67970598 67970696 1.180000e-33 156.0
57 TraesCS2B01G137600 chr2A 90.123 81 4 3 7260 7340 569278895 569278819 1.560000e-17 102.0
58 TraesCS2B01G137600 chr1D 88.113 1102 99 18 1578 2659 96932973 96934062 0.000000e+00 1280.0
59 TraesCS2B01G137600 chr1D 89.189 666 53 11 1583 2245 251717844 251717195 0.000000e+00 813.0
60 TraesCS2B01G137600 chr1D 95.679 162 7 0 5021 5182 366097686 366097525 2.430000e-65 261.0
61 TraesCS2B01G137600 chr1D 95.238 63 3 0 7339 7401 298568579 298568641 5.610000e-17 100.0
62 TraesCS2B01G137600 chr1D 92.647 68 1 3 7268 7335 298568563 298568626 2.610000e-15 95.3
63 TraesCS2B01G137600 chr1D 89.474 76 5 1 7262 7337 413217225 413217297 9.390000e-15 93.5
64 TraesCS2B01G137600 chr1D 92.063 63 5 0 7339 7401 413217248 413217310 1.210000e-13 89.8
65 TraesCS2B01G137600 chr1D 92.063 63 2 1 7275 7337 116546682 116546623 1.570000e-12 86.1
66 TraesCS2B01G137600 chr1D 93.103 58 4 0 7339 7396 141706038 141705981 1.570000e-12 86.1
67 TraesCS2B01G137600 chr1D 87.671 73 5 3 7268 7340 141706055 141705987 2.030000e-11 82.4
68 TraesCS2B01G137600 chr4D 87.679 1120 95 23 1559 2657 428594286 428593189 0.000000e+00 1264.0
69 TraesCS2B01G137600 chr4D 89.201 676 47 15 1583 2245 502490750 502491412 0.000000e+00 821.0
70 TraesCS2B01G137600 chr4D 96.914 162 5 0 5021 5182 478512182 478512343 1.120000e-68 272.0
71 TraesCS2B01G137600 chr4D 96.203 158 6 0 5025 5182 254241200 254241357 8.750000e-65 259.0
72 TraesCS2B01G137600 chr4D 96.774 155 5 0 5028 5182 405455126 405455280 8.750000e-65 259.0
73 TraesCS2B01G137600 chr4D 96.178 157 6 0 5026 5182 443515146 443515302 3.150000e-64 257.0
74 TraesCS2B01G137600 chr4D 92.571 175 13 0 5008 5182 331632583 331632409 1.460000e-62 252.0
75 TraesCS2B01G137600 chr4D 96.296 54 2 0 7267 7320 463465518 463465571 1.210000e-13 89.8
76 TraesCS2B01G137600 chr4D 91.935 62 5 0 7339 7400 234413544 234413483 4.370000e-13 87.9
77 TraesCS2B01G137600 chr4D 90.741 54 5 0 7267 7320 93562569 93562622 1.220000e-08 73.1
78 TraesCS2B01G137600 chr4D 90.741 54 5 0 7267 7320 234413562 234413509 1.220000e-08 73.1
79 TraesCS2B01G137600 chr5D 89.543 679 48 12 1584 2246 100119200 100119871 0.000000e+00 839.0
80 TraesCS2B01G137600 chr5D 89.233 678 54 12 1577 2246 423072629 423073295 0.000000e+00 830.0
81 TraesCS2B01G137600 chr5D 93.059 389 25 1 2271 2659 2584416 2584802 1.280000e-157 568.0
82 TraesCS2B01G137600 chr5D 92.172 396 28 2 2271 2665 3251155 3250762 2.770000e-154 556.0
83 TraesCS2B01G137600 chr5D 92.250 400 18 7 2271 2659 100119954 100120351 9.960000e-154 555.0
84 TraesCS2B01G137600 chr5D 97.500 160 4 0 5023 5182 548323026 548322867 3.120000e-69 274.0
85 TraesCS2B01G137600 chr5D 95.312 64 3 0 7339 7402 541806243 541806180 1.560000e-17 102.0
86 TraesCS2B01G137600 chr5D 88.889 81 5 2 7257 7337 541806270 541806194 7.260000e-16 97.1
87 TraesCS2B01G137600 chr5D 91.429 70 3 2 7268 7337 242358372 242358438 9.390000e-15 93.5
88 TraesCS2B01G137600 chr7D 88.392 715 57 14 1548 2246 160432695 160431991 0.000000e+00 837.0
89 TraesCS2B01G137600 chr7D 89.880 415 36 2 2246 2659 565529357 565529766 6.040000e-146 529.0
90 TraesCS2B01G137600 chr7D 91.781 73 3 1 7265 7337 401536769 401536700 2.020000e-16 99.0
91 TraesCS2B01G137600 chr3D 88.329 694 59 16 1567 2246 355616047 355616732 0.000000e+00 813.0
92 TraesCS2B01G137600 chr3D 95.833 96 3 1 1407 1501 374057208 374057303 4.250000e-33 154.0
93 TraesCS2B01G137600 chrUn 88.484 686 47 24 1578 2245 389910700 389910029 0.000000e+00 800.0
94 TraesCS2B01G137600 chrUn 96.226 159 6 0 5024 5182 395339779 395339937 2.430000e-65 261.0
95 TraesCS2B01G137600 chrUn 95.625 160 7 0 5023 5182 12801962 12801803 3.150000e-64 257.0
96 TraesCS2B01G137600 chrUn 95.625 160 7 0 5023 5182 284001555 284001714 3.150000e-64 257.0
97 TraesCS2B01G137600 chrUn 93.902 164 9 1 5019 5182 277314043 277314205 6.810000e-61 246.0
98 TraesCS2B01G137600 chrUn 92.857 168 11 1 5015 5182 88100100 88100266 8.810000e-60 243.0
99 TraesCS2B01G137600 chrUn 94.304 158 8 1 5025 5182 379839253 379839409 3.170000e-59 241.0
100 TraesCS2B01G137600 chrUn 94.304 158 8 1 5025 5182 379897927 379898083 3.170000e-59 241.0
101 TraesCS2B01G137600 chrUn 92.353 170 9 3 5015 5182 15977953 15978120 1.140000e-58 239.0
102 TraesCS2B01G137600 chrUn 93.210 162 10 1 5021 5182 87980743 87980903 4.100000e-58 237.0
103 TraesCS2B01G137600 chrUn 91.176 68 3 2 7268 7335 341187280 341187344 1.210000e-13 89.8
104 TraesCS2B01G137600 chrUn 93.103 58 4 0 7339 7396 84439900 84439843 1.570000e-12 86.1
105 TraesCS2B01G137600 chrUn 86.301 73 6 3 7268 7340 84439917 84439849 9.450000e-10 76.8
106 TraesCS2B01G137600 chrUn 87.302 63 8 0 7339 7401 37371563 37371501 1.220000e-08 73.1
107 TraesCS2B01G137600 chrUn 90.741 54 3 2 7268 7320 37371580 37371528 4.400000e-08 71.3
108 TraesCS2B01G137600 chrUn 85.714 63 9 0 7339 7401 37004646 37004708 5.690000e-07 67.6
109 TraesCS2B01G137600 chrUn 85.714 63 9 0 7339 7401 329135074 329135012 5.690000e-07 67.6
110 TraesCS2B01G137600 chrUn 85.714 63 9 0 7339 7401 332577043 332576981 5.690000e-07 67.6
111 TraesCS2B01G137600 chrUn 87.500 56 7 0 7265 7320 37004626 37004681 2.050000e-06 65.8
112 TraesCS2B01G137600 chrUn 88.679 53 6 0 7268 7320 329135091 329135039 2.050000e-06 65.8
113 TraesCS2B01G137600 chrUn 88.679 53 6 0 7268 7320 332577060 332577008 2.050000e-06 65.8
114 TraesCS2B01G137600 chrUn 88.462 52 6 0 7268 7319 196711377 196711326 7.360000e-06 63.9
115 TraesCS2B01G137600 chrUn 84.127 63 10 0 7339 7401 196711360 196711298 2.650000e-05 62.1
116 TraesCS2B01G137600 chr4A 92.029 414 21 9 8041 8448 509595309 509595716 9.890000e-159 571.0
117 TraesCS2B01G137600 chr4A 99.219 256 2 0 3 258 694437324 694437579 6.210000e-126 462.0
118 TraesCS2B01G137600 chr4A 96.914 162 5 0 5021 5182 20234536 20234697 1.120000e-68 272.0
119 TraesCS2B01G137600 chr4A 92.754 69 5 0 7858 7926 509595207 509595275 5.610000e-17 100.0
120 TraesCS2B01G137600 chr4A 87.654 81 6 3 7254 7334 259769108 259769032 3.380000e-14 91.6
121 TraesCS2B01G137600 chr6A 92.765 387 28 0 2271 2657 435593399 435593785 2.140000e-155 560.0
122 TraesCS2B01G137600 chr6A 99.222 257 2 0 3 259 2457116 2456860 1.730000e-126 464.0
123 TraesCS2B01G137600 chr6A 96.364 165 5 1 5019 5182 7980286 7980450 4.040000e-68 270.0
124 TraesCS2B01G137600 chr6A 96.875 160 5 0 5023 5182 9366103 9365944 1.450000e-67 268.0
125 TraesCS2B01G137600 chr6A 94.737 171 8 1 5012 5182 79952235 79952066 1.880000e-66 265.0
126 TraesCS2B01G137600 chr6A 98.413 63 1 0 7339 7401 209391363 209391425 2.590000e-20 111.0
127 TraesCS2B01G137600 chr6A 94.366 71 1 1 7267 7337 209391345 209391412 1.210000e-18 106.0
128 TraesCS2B01G137600 chr6A 92.857 70 2 2 7265 7334 14351070 14351004 2.020000e-16 99.0
129 TraesCS2B01G137600 chr6A 93.750 64 4 0 7339 7402 14351050 14350987 7.260000e-16 97.1
130 TraesCS2B01G137600 chr3A 89.639 415 36 3 2247 2659 20551353 20550944 1.010000e-143 521.0
131 TraesCS2B01G137600 chr3A 96.933 163 5 0 5020 5182 642038940 642038778 3.120000e-69 274.0
132 TraesCS2B01G137600 chr3A 95.294 170 6 2 5014 5182 402276873 402276705 1.450000e-67 268.0
133 TraesCS2B01G137600 chr3A 96.774 93 3 0 1407 1499 569644584 569644492 1.180000e-33 156.0
134 TraesCS2B01G137600 chr5B 99.234 261 2 0 1 261 648362207 648361947 1.030000e-128 472.0
135 TraesCS2B01G137600 chr5B 99.219 256 2 0 3 258 485423011 485423266 6.210000e-126 462.0
136 TraesCS2B01G137600 chr5B 96.364 165 6 0 5018 5182 403717736 403717900 1.120000e-68 272.0
137 TraesCS2B01G137600 chr5B 96.894 161 5 0 5022 5182 544855713 544855873 4.040000e-68 270.0
138 TraesCS2B01G137600 chr5B 92.308 65 5 0 7339 7403 49558783 49558847 9.390000e-15 93.5
139 TraesCS2B01G137600 chr4B 99.222 257 2 0 2 258 31205554 31205810 1.730000e-126 464.0
140 TraesCS2B01G137600 chr4B 99.222 257 2 0 3 259 621862126 621862382 1.730000e-126 464.0
141 TraesCS2B01G137600 chr4B 99.219 256 2 0 3 258 10167946 10168201 6.210000e-126 462.0
142 TraesCS2B01G137600 chr4B 96.914 162 5 0 5021 5182 455621445 455621606 1.120000e-68 272.0
143 TraesCS2B01G137600 chr4B 96.296 162 6 0 5021 5182 575905372 575905533 5.230000e-67 267.0
144 TraesCS2B01G137600 chr4B 96.273 161 6 0 5022 5182 193970493 193970653 1.880000e-66 265.0
145 TraesCS2B01G137600 chr4B 95.210 167 7 1 5016 5182 304888087 304887922 6.760000e-66 263.0
146 TraesCS2B01G137600 chr4B 95.732 164 6 1 5019 5182 486779883 486780045 6.760000e-66 263.0
147 TraesCS2B01G137600 chr4B 92.063 63 5 0 7339 7401 270831733 270831671 1.210000e-13 89.8
148 TraesCS2B01G137600 chr1B 99.222 257 2 0 3 259 55557487 55557231 1.730000e-126 464.0
149 TraesCS2B01G137600 chr1B 96.951 164 5 0 5019 5182 110622811 110622974 8.680000e-70 276.0
150 TraesCS2B01G137600 chr1B 93.939 99 4 1 1401 1499 497800987 497801083 1.980000e-31 148.0
151 TraesCS2B01G137600 chr1B 90.123 81 4 2 7257 7337 556993766 556993842 1.560000e-17 102.0
152 TraesCS2B01G137600 chr3B 98.842 259 3 0 1 259 741132950 741133208 6.210000e-126 462.0
153 TraesCS2B01G137600 chr3B 96.739 92 3 0 1407 1498 820413770 820413861 4.250000e-33 154.0
154 TraesCS2B01G137600 chr3B 96.078 51 2 0 3205 3255 215729539 215729589 5.650000e-12 84.2
155 TraesCS2B01G137600 chr7B 95.930 172 6 1 5012 5182 83032912 83032741 2.410000e-70 278.0
156 TraesCS2B01G137600 chr7B 94.898 98 3 1 1401 1498 677716361 677716456 1.530000e-32 152.0
157 TraesCS2B01G137600 chr7B 98.039 51 1 0 3205 3255 603521379 603521329 1.210000e-13 89.8
158 TraesCS2B01G137600 chr7A 96.933 163 5 0 5020 5182 105168995 105168833 3.120000e-69 274.0
159 TraesCS2B01G137600 chr6B 96.933 163 5 0 5020 5182 475722681 475722843 3.120000e-69 274.0
160 TraesCS2B01G137600 chr6B 98.413 63 1 0 7339 7401 278674635 278674697 2.590000e-20 111.0
161 TraesCS2B01G137600 chr6B 94.366 71 1 1 7267 7337 278674617 278674684 1.210000e-18 106.0
162 TraesCS2B01G137600 chr6B 91.304 69 6 0 7339 7407 332412929 332412861 2.610000e-15 95.3
163 TraesCS2B01G137600 chr1A 96.894 161 5 0 5022 5182 583789131 583789291 4.040000e-68 270.0
164 TraesCS2B01G137600 chr1A 95.706 163 7 0 5020 5182 3255909 3255747 6.760000e-66 263.0
165 TraesCS2B01G137600 chr1A 96.250 160 6 0 5023 5182 101379111 101379270 6.760000e-66 263.0
166 TraesCS2B01G137600 chr1A 96.250 160 6 0 5023 5182 538399285 538399444 6.760000e-66 263.0
167 TraesCS2B01G137600 chr1A 96.226 159 6 0 5024 5182 83827917 83828075 2.430000e-65 261.0
168 TraesCS2B01G137600 chr1A 94.611 167 9 0 5016 5182 363424702 363424868 8.750000e-65 259.0
169 TraesCS2B01G137600 chr1A 95.082 61 3 0 7339 7399 236718458 236718398 7.260000e-16 97.1
170 TraesCS2B01G137600 chr1A 93.651 63 4 0 7339 7401 148958912 148958974 2.610000e-15 95.3
171 TraesCS2B01G137600 chr1A 91.803 61 5 0 7341 7401 372237182 372237242 1.570000e-12 86.1
172 TraesCS2B01G137600 chr1A 86.420 81 5 3 7260 7337 236718486 236718409 5.650000e-12 84.2
173 TraesCS2B01G137600 chr1A 86.076 79 7 2 7262 7340 148958889 148958963 2.030000e-11 82.4
174 TraesCS2B01G137600 chr6D 96.203 158 6 0 5025 5182 44244419 44244576 8.750000e-65 259.0
175 TraesCS2B01G137600 chr6D 96.774 155 5 0 5028 5182 128903241 128903087 8.750000e-65 259.0
176 TraesCS2B01G137600 chr6D 97.917 96 1 1 1407 1501 145828546 145828641 1.960000e-36 165.0
177 TraesCS2B01G137600 chr6D 97.778 90 2 0 1409 1498 436684058 436683969 1.180000e-33 156.0
178 TraesCS2B01G137600 chr6D 96.825 63 2 0 7339 7401 155601983 155602045 1.210000e-18 106.0
179 TraesCS2B01G137600 chr6D 95.312 64 3 0 7339 7402 24823361 24823424 1.560000e-17 102.0
180 TraesCS2B01G137600 chr6D 94.203 69 1 2 7267 7335 155601965 155602030 1.560000e-17 102.0
181 TraesCS2B01G137600 chr6D 89.474 76 2 4 7265 7337 24823338 24823410 3.380000e-14 91.6
182 TraesCS2B01G137600 chr6D 96.154 52 2 0 7269 7320 220939546 220939495 1.570000e-12 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G137600 chr2B 104571684 104580465 8781 False 16218.000000 16218 100.000000 1 8782 1 chr2B.!!$F1 8781
1 TraesCS2B01G137600 chr2B 104301569 104307716 6147 False 364.400000 569 82.688600 1005 7263 5 chr2B.!!$F3 6258
2 TraesCS2B01G137600 chr2D 66868612 66876927 8315 True 1355.444444 4346 93.449667 276 8775 9 chr2D.!!$R5 8499
3 TraesCS2B01G137600 chr2D 67194027 67197121 3094 True 355.000000 475 84.033250 5185 7173 4 chr2D.!!$R6 1988
4 TraesCS2B01G137600 chr2A 67976123 67980500 4377 False 861.500000 1585 92.060833 4503 8775 6 chr2A.!!$F7 4272
5 TraesCS2B01G137600 chr2A 67969724 67971962 2238 False 839.000000 1871 92.294750 880 4503 4 chr2A.!!$F6 3623
6 TraesCS2B01G137600 chr2A 67706895 67714080 7185 False 686.833333 2663 91.312083 259 8149 12 chr2A.!!$F5 7890
7 TraesCS2B01G137600 chr1D 96932973 96934062 1089 False 1280.000000 1280 88.113000 1578 2659 1 chr1D.!!$F1 1081
8 TraesCS2B01G137600 chr1D 251717195 251717844 649 True 813.000000 813 89.189000 1583 2245 1 chr1D.!!$R2 662
9 TraesCS2B01G137600 chr4D 428593189 428594286 1097 True 1264.000000 1264 87.679000 1559 2657 1 chr4D.!!$R2 1098
10 TraesCS2B01G137600 chr4D 502490750 502491412 662 False 821.000000 821 89.201000 1583 2245 1 chr4D.!!$F7 662
11 TraesCS2B01G137600 chr5D 423072629 423073295 666 False 830.000000 830 89.233000 1577 2246 1 chr5D.!!$F3 669
12 TraesCS2B01G137600 chr5D 100119200 100120351 1151 False 697.000000 839 90.896500 1584 2659 2 chr5D.!!$F4 1075
13 TraesCS2B01G137600 chr7D 160431991 160432695 704 True 837.000000 837 88.392000 1548 2246 1 chr7D.!!$R1 698
14 TraesCS2B01G137600 chr3D 355616047 355616732 685 False 813.000000 813 88.329000 1567 2246 1 chr3D.!!$F1 679
15 TraesCS2B01G137600 chrUn 389910029 389910700 671 True 800.000000 800 88.484000 1578 2245 1 chrUn.!!$R2 667
16 TraesCS2B01G137600 chr4A 509595207 509595716 509 False 335.500000 571 92.391500 7858 8448 2 chr4A.!!$F3 590

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
186 187 0.031414 AGGGCATTAGTACCGACCCT 60.031 55.000 4.22 4.22 42.97 4.34 F
248 249 0.037734 CGGGACTGTAGGCCCTTTTT 59.962 55.000 20.34 0.00 42.40 1.94 F
417 1275 0.392595 GGGTGGGCCTTAACTCTTCG 60.393 60.000 4.53 0.00 34.45 3.79 F
2124 3311 0.538746 CCCTAACTTTGTTGGGCGGT 60.539 55.000 7.23 0.00 32.49 5.68 F
2274 3464 0.111253 AAGGACCTGCCAAGTCAAGG 59.889 55.000 0.00 0.00 40.02 3.61 F
2431 3696 0.745486 CGAACATGGCAGATGGCTCA 60.745 55.000 7.95 0.00 44.01 4.26 F
3630 4981 1.265365 GTTCTCTTCTTGGCTGTGCAC 59.735 52.381 10.75 10.75 0.00 4.57 F
5050 6470 0.548031 CATCCCCAGTGCATGTACCT 59.452 55.000 10.59 0.00 0.00 3.08 F
5175 6595 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85 F
6008 9387 0.319211 TTGTGTAAGTCACCGAGCCG 60.319 55.000 0.00 0.00 45.61 5.52 F
7468 11348 0.317160 AAACTCGAGCATCACGTGGA 59.683 50.000 17.00 2.56 33.17 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 2512 0.176680 ACTTGTGCATCTAGCCGAGG 59.823 55.000 0.00 0.00 44.83 4.63 R
2218 3408 0.247736 CTAGGATAGGGCCGCATCAC 59.752 60.000 18.89 10.71 34.22 3.06 R
2255 3445 0.111253 CCTTGACTTGGCAGGTCCTT 59.889 55.000 24.65 0.00 35.26 3.36 R
3953 5320 0.306228 GCGCATTGTGTGTGTGTGTA 59.694 50.000 0.30 0.00 40.50 2.90 R
3954 5321 1.063972 GCGCATTGTGTGTGTGTGT 59.936 52.632 0.30 0.00 40.50 3.72 R
4390 5792 1.290431 AGATCCTGAAGGCAGAGAGGA 59.710 52.381 0.00 0.00 45.17 3.71 R
5102 6522 0.108520 AAATGCAGGGAAATGCTGCG 60.109 50.000 0.00 0.00 46.63 5.18 R
6519 10350 0.734889 GCCACATTCACCTTCCATCG 59.265 55.000 0.00 0.00 0.00 3.84 R
7094 10958 0.946221 ACGTCTGAGCTGCTTTTCCG 60.946 55.000 2.53 7.36 0.00 4.30 R
7480 11360 0.109086 CACGTGGTGCTCGAGATCTT 60.109 55.000 18.75 0.00 0.00 2.40 R
8449 12858 1.423395 CACTGGTTCGTCTTGAGAGC 58.577 55.000 0.00 0.00 0.00 4.09 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.280457 AAACAAAAACCCCAGCCACA 58.720 45.000 0.00 0.00 0.00 4.17
27 28 0.829990 AACAAAAACCCCAGCCACAG 59.170 50.000 0.00 0.00 0.00 3.66
28 29 0.032615 ACAAAAACCCCAGCCACAGA 60.033 50.000 0.00 0.00 0.00 3.41
29 30 1.118838 CAAAAACCCCAGCCACAGAA 58.881 50.000 0.00 0.00 0.00 3.02
33 34 2.674380 CCCCAGCCACAGAAGTGC 60.674 66.667 0.00 0.00 44.53 4.40
34 35 2.433446 CCCAGCCACAGAAGTGCT 59.567 61.111 0.00 0.00 44.53 4.40
43 44 2.356313 AGAAGTGCTGACGCGTGG 60.356 61.111 20.70 10.85 39.65 4.94
45 46 1.738099 GAAGTGCTGACGCGTGGAT 60.738 57.895 20.70 0.00 39.65 3.41
46 47 1.959899 GAAGTGCTGACGCGTGGATG 61.960 60.000 20.70 4.59 39.65 3.51
51 52 1.068083 CTGACGCGTGGATGCCTAT 59.932 57.895 20.70 0.00 0.00 2.57
52 53 0.530650 CTGACGCGTGGATGCCTATT 60.531 55.000 20.70 0.00 0.00 1.73
53 54 0.809636 TGACGCGTGGATGCCTATTG 60.810 55.000 20.70 0.00 0.00 1.90
54 55 1.498865 GACGCGTGGATGCCTATTGG 61.499 60.000 20.70 0.00 0.00 3.16
55 56 1.523711 CGCGTGGATGCCTATTGGT 60.524 57.895 0.00 0.00 35.27 3.67
56 57 1.498865 CGCGTGGATGCCTATTGGTC 61.499 60.000 0.00 0.00 35.27 4.02
57 58 1.166531 GCGTGGATGCCTATTGGTCC 61.167 60.000 0.00 0.00 35.27 4.46
60 61 1.073199 GGATGCCTATTGGTCCCGG 59.927 63.158 0.00 0.00 35.27 5.73
61 62 1.705997 GGATGCCTATTGGTCCCGGT 61.706 60.000 0.00 0.00 35.27 5.28
62 63 0.182775 GATGCCTATTGGTCCCGGTT 59.817 55.000 0.00 0.00 35.27 4.44
63 64 0.106719 ATGCCTATTGGTCCCGGTTG 60.107 55.000 0.00 0.00 35.27 3.77
64 65 1.453197 GCCTATTGGTCCCGGTTGG 60.453 63.158 0.00 0.00 35.27 3.77
66 67 0.393808 CCTATTGGTCCCGGTTGGTG 60.394 60.000 0.00 0.00 34.77 4.17
83 84 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
84 85 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
85 86 1.901464 CCACCAACCGGGACCAAAG 60.901 63.158 6.32 0.00 41.15 2.77
86 87 1.901464 CACCAACCGGGACCAAAGG 60.901 63.158 6.32 0.00 41.15 3.11
87 88 2.989253 CCAACCGGGACCAAAGGC 60.989 66.667 6.32 0.00 40.01 4.35
88 89 2.989253 CAACCGGGACCAAAGGCC 60.989 66.667 6.32 0.00 0.00 5.19
92 93 4.426313 CGGGACCAAAGGCCCTCC 62.426 72.222 0.00 0.00 37.05 4.30
94 95 2.356667 GGACCAAAGGCCCTCCTG 59.643 66.667 0.00 0.00 43.40 3.86
105 106 3.795041 CCTCCTGCCTGGGCTCAG 61.795 72.222 6.61 6.61 42.51 3.35
106 107 4.486503 CTCCTGCCTGGGCTCAGC 62.487 72.222 8.54 4.40 42.51 4.26
112 113 4.463879 CCTGGGCTCAGCGGACAG 62.464 72.222 8.54 7.46 39.61 3.51
113 114 4.463879 CTGGGCTCAGCGGACAGG 62.464 72.222 0.00 0.00 33.86 4.00
123 124 4.742201 CGGACAGGCCACGTGGAG 62.742 72.222 38.30 26.43 37.39 3.86
124 125 4.394712 GGACAGGCCACGTGGAGG 62.395 72.222 38.30 25.82 37.39 4.30
131 132 3.402681 CCACGTGGAGGCCCATCT 61.403 66.667 31.31 0.00 45.68 2.90
132 133 2.124983 CACGTGGAGGCCCATCTG 60.125 66.667 7.95 0.00 45.68 2.90
133 134 2.607750 ACGTGGAGGCCCATCTGT 60.608 61.111 0.00 0.00 45.68 3.41
134 135 2.187946 CGTGGAGGCCCATCTGTC 59.812 66.667 0.00 0.00 45.68 3.51
135 136 2.592308 GTGGAGGCCCATCTGTCC 59.408 66.667 0.00 0.00 45.68 4.02
136 137 2.692368 TGGAGGCCCATCTGTCCC 60.692 66.667 0.00 0.00 37.58 4.46
137 138 3.866582 GGAGGCCCATCTGTCCCG 61.867 72.222 0.00 0.00 0.00 5.14
138 139 3.866582 GAGGCCCATCTGTCCCGG 61.867 72.222 0.00 0.00 0.00 5.73
139 140 4.741239 AGGCCCATCTGTCCCGGT 62.741 66.667 0.00 0.00 0.00 5.28
140 141 3.728373 GGCCCATCTGTCCCGGTT 61.728 66.667 0.00 0.00 0.00 4.44
141 142 2.124695 GCCCATCTGTCCCGGTTC 60.125 66.667 0.00 0.00 0.00 3.62
142 143 2.670148 GCCCATCTGTCCCGGTTCT 61.670 63.158 0.00 0.00 0.00 3.01
143 144 1.221840 CCCATCTGTCCCGGTTCTG 59.778 63.158 0.00 0.00 0.00 3.02
144 145 1.221840 CCATCTGTCCCGGTTCTGG 59.778 63.158 0.00 0.00 0.00 3.86
145 146 1.264749 CCATCTGTCCCGGTTCTGGA 61.265 60.000 0.00 0.00 0.00 3.86
146 147 0.833287 CATCTGTCCCGGTTCTGGAT 59.167 55.000 0.00 0.00 33.65 3.41
147 148 1.210478 CATCTGTCCCGGTTCTGGATT 59.790 52.381 0.00 0.00 33.65 3.01
148 149 0.613260 TCTGTCCCGGTTCTGGATTG 59.387 55.000 0.00 0.00 33.65 2.67
149 150 0.613260 CTGTCCCGGTTCTGGATTGA 59.387 55.000 0.00 0.00 33.65 2.57
150 151 1.003118 CTGTCCCGGTTCTGGATTGAA 59.997 52.381 0.00 0.00 33.65 2.69
151 152 1.271163 TGTCCCGGTTCTGGATTGAAC 60.271 52.381 0.00 0.00 43.88 3.18
156 157 3.948735 GTTCTGGATTGAACCGGGA 57.051 52.632 6.32 0.00 40.10 5.14
157 158 1.450025 GTTCTGGATTGAACCGGGAC 58.550 55.000 6.32 0.00 40.10 4.46
158 159 1.003233 GTTCTGGATTGAACCGGGACT 59.997 52.381 6.32 0.00 40.62 3.85
159 160 2.235402 GTTCTGGATTGAACCGGGACTA 59.765 50.000 6.32 0.00 40.62 2.59
160 161 2.542550 TCTGGATTGAACCGGGACTAA 58.457 47.619 6.32 0.00 36.97 2.24
161 162 2.907696 TCTGGATTGAACCGGGACTAAA 59.092 45.455 6.32 0.00 36.97 1.85
162 163 3.055385 TCTGGATTGAACCGGGACTAAAG 60.055 47.826 6.32 0.00 36.97 1.85
163 164 2.026636 TGGATTGAACCGGGACTAAAGG 60.027 50.000 6.32 0.00 0.00 3.11
164 165 2.640184 GATTGAACCGGGACTAAAGGG 58.360 52.381 6.32 0.00 0.00 3.95
165 166 1.437397 TTGAACCGGGACTAAAGGGT 58.563 50.000 6.32 0.00 0.00 4.34
166 167 0.978907 TGAACCGGGACTAAAGGGTC 59.021 55.000 6.32 0.00 41.92 4.46
167 168 0.978907 GAACCGGGACTAAAGGGTCA 59.021 55.000 6.32 0.00 41.24 4.02
168 169 0.981943 AACCGGGACTAAAGGGTCAG 59.018 55.000 6.32 0.00 37.91 3.51
169 170 0.908180 ACCGGGACTAAAGGGTCAGG 60.908 60.000 6.32 0.00 39.59 3.86
170 171 1.623542 CCGGGACTAAAGGGTCAGGG 61.624 65.000 0.00 0.00 37.91 4.45
171 172 1.608154 GGGACTAAAGGGTCAGGGC 59.392 63.158 0.00 0.00 37.91 5.19
172 173 1.205460 GGGACTAAAGGGTCAGGGCA 61.205 60.000 0.00 0.00 37.91 5.36
173 174 0.919710 GGACTAAAGGGTCAGGGCAT 59.080 55.000 0.00 0.00 37.91 4.40
174 175 1.285078 GGACTAAAGGGTCAGGGCATT 59.715 52.381 0.00 0.00 37.91 3.56
175 176 2.508300 GGACTAAAGGGTCAGGGCATTA 59.492 50.000 0.00 0.00 37.91 1.90
176 177 3.433740 GGACTAAAGGGTCAGGGCATTAG 60.434 52.174 0.00 0.00 37.91 1.73
177 178 3.190439 ACTAAAGGGTCAGGGCATTAGT 58.810 45.455 0.00 0.00 0.00 2.24
178 179 4.368067 ACTAAAGGGTCAGGGCATTAGTA 58.632 43.478 0.00 0.00 33.23 1.82
179 180 3.646736 AAAGGGTCAGGGCATTAGTAC 57.353 47.619 0.00 0.00 0.00 2.73
180 181 1.508256 AGGGTCAGGGCATTAGTACC 58.492 55.000 0.00 0.00 0.00 3.34
181 182 0.106149 GGGTCAGGGCATTAGTACCG 59.894 60.000 0.00 0.00 0.00 4.02
182 183 1.117150 GGTCAGGGCATTAGTACCGA 58.883 55.000 0.00 0.00 0.00 4.69
183 184 1.202498 GGTCAGGGCATTAGTACCGAC 60.202 57.143 0.00 0.00 0.00 4.79
184 185 1.117150 TCAGGGCATTAGTACCGACC 58.883 55.000 0.00 0.00 0.00 4.79
185 186 0.106149 CAGGGCATTAGTACCGACCC 59.894 60.000 0.00 0.00 37.63 4.46
186 187 0.031414 AGGGCATTAGTACCGACCCT 60.031 55.000 4.22 4.22 42.97 4.34
187 188 0.835276 GGGCATTAGTACCGACCCTT 59.165 55.000 0.00 0.00 34.34 3.95
188 189 1.211212 GGGCATTAGTACCGACCCTTT 59.789 52.381 0.00 0.00 34.34 3.11
189 190 2.435437 GGGCATTAGTACCGACCCTTTA 59.565 50.000 0.00 0.00 34.34 1.85
190 191 3.493873 GGGCATTAGTACCGACCCTTTAG 60.494 52.174 0.00 0.00 34.34 1.85
191 192 3.133542 GGCATTAGTACCGACCCTTTAGT 59.866 47.826 0.00 0.00 0.00 2.24
192 193 4.366586 GCATTAGTACCGACCCTTTAGTC 58.633 47.826 0.00 0.00 0.00 2.59
193 194 4.738839 GCATTAGTACCGACCCTTTAGTCC 60.739 50.000 0.00 0.00 32.91 3.85
194 195 1.857965 AGTACCGACCCTTTAGTCCC 58.142 55.000 0.00 0.00 32.91 4.46
195 196 0.457443 GTACCGACCCTTTAGTCCCG 59.543 60.000 0.00 0.00 32.91 5.14
196 197 0.684153 TACCGACCCTTTAGTCCCGG 60.684 60.000 0.00 0.00 42.30 5.73
197 198 1.986210 CCGACCCTTTAGTCCCGGT 60.986 63.158 0.00 0.00 32.91 5.28
198 199 1.547472 CCGACCCTTTAGTCCCGGTT 61.547 60.000 0.00 0.00 32.91 4.44
199 200 0.108472 CGACCCTTTAGTCCCGGTTC 60.108 60.000 0.00 0.00 32.91 3.62
200 201 0.978907 GACCCTTTAGTCCCGGTTCA 59.021 55.000 0.00 0.00 0.00 3.18
201 202 1.558294 GACCCTTTAGTCCCGGTTCAT 59.442 52.381 0.00 0.00 0.00 2.57
202 203 1.280998 ACCCTTTAGTCCCGGTTCATG 59.719 52.381 0.00 0.00 0.00 3.07
203 204 1.557832 CCCTTTAGTCCCGGTTCATGA 59.442 52.381 0.00 0.00 0.00 3.07
204 205 2.026636 CCCTTTAGTCCCGGTTCATGAA 60.027 50.000 3.38 3.38 0.00 2.57
205 206 3.007635 CCTTTAGTCCCGGTTCATGAAC 58.992 50.000 27.16 27.16 40.45 3.18
217 218 3.007635 GTTCATGAACCGGGACTAAAGG 58.992 50.000 25.26 0.00 35.36 3.11
218 219 1.065709 TCATGAACCGGGACTAAAGGC 60.066 52.381 6.32 0.00 0.00 4.35
219 220 0.255033 ATGAACCGGGACTAAAGGCC 59.745 55.000 6.32 0.00 0.00 5.19
220 221 0.838987 TGAACCGGGACTAAAGGCCT 60.839 55.000 6.32 0.00 0.00 5.19
221 222 0.327259 GAACCGGGACTAAAGGCCTT 59.673 55.000 13.78 13.78 0.00 4.35
222 223 0.327259 AACCGGGACTAAAGGCCTTC 59.673 55.000 20.79 5.96 0.00 3.46
223 224 0.838987 ACCGGGACTAAAGGCCTTCA 60.839 55.000 20.79 2.18 0.00 3.02
224 225 0.392595 CCGGGACTAAAGGCCTTCAC 60.393 60.000 20.79 6.38 0.00 3.18
225 226 0.392595 CGGGACTAAAGGCCTTCACC 60.393 60.000 20.79 18.16 0.00 4.02
226 227 0.696501 GGGACTAAAGGCCTTCACCA 59.303 55.000 20.79 3.63 0.00 4.17
227 228 1.074889 GGGACTAAAGGCCTTCACCAA 59.925 52.381 20.79 1.35 0.00 3.67
228 229 2.160205 GGACTAAAGGCCTTCACCAAC 58.840 52.381 20.79 8.48 0.00 3.77
229 230 2.160205 GACTAAAGGCCTTCACCAACC 58.840 52.381 20.79 0.97 0.00 3.77
230 231 1.165270 CTAAAGGCCTTCACCAACCG 58.835 55.000 20.79 0.00 0.00 4.44
231 232 0.250989 TAAAGGCCTTCACCAACCGG 60.251 55.000 20.79 0.00 38.77 5.28
232 233 2.994643 AAAGGCCTTCACCAACCGGG 62.995 60.000 20.79 0.00 44.81 5.73
233 234 3.961414 GGCCTTCACCAACCGGGA 61.961 66.667 6.32 0.00 41.15 5.14
234 235 2.671963 GCCTTCACCAACCGGGAC 60.672 66.667 6.32 0.00 41.15 4.46
235 236 3.157680 CCTTCACCAACCGGGACT 58.842 61.111 6.32 0.00 41.15 3.85
236 237 1.302511 CCTTCACCAACCGGGACTG 60.303 63.158 6.32 0.00 41.15 3.51
237 238 1.450211 CTTCACCAACCGGGACTGT 59.550 57.895 6.32 0.00 41.15 3.55
238 239 0.682852 CTTCACCAACCGGGACTGTA 59.317 55.000 6.32 0.00 41.15 2.74
239 240 0.682852 TTCACCAACCGGGACTGTAG 59.317 55.000 6.32 0.00 41.15 2.74
240 241 1.189524 TCACCAACCGGGACTGTAGG 61.190 60.000 6.32 0.00 41.15 3.18
241 242 2.267961 CCAACCGGGACTGTAGGC 59.732 66.667 6.32 0.00 40.01 3.93
242 243 2.267961 CAACCGGGACTGTAGGCC 59.732 66.667 6.32 0.00 0.00 5.19
243 244 3.007323 AACCGGGACTGTAGGCCC 61.007 66.667 13.14 13.14 41.11 5.80
244 245 3.557695 AACCGGGACTGTAGGCCCT 62.558 63.158 20.34 0.00 42.40 5.19
245 246 2.687566 CCGGGACTGTAGGCCCTT 60.688 66.667 20.34 0.00 42.40 3.95
246 247 2.298661 CCGGGACTGTAGGCCCTTT 61.299 63.158 20.34 0.00 42.40 3.11
247 248 1.683441 CGGGACTGTAGGCCCTTTT 59.317 57.895 20.34 0.00 42.40 2.27
248 249 0.037734 CGGGACTGTAGGCCCTTTTT 59.962 55.000 20.34 0.00 42.40 1.94
249 250 1.835494 GGGACTGTAGGCCCTTTTTC 58.165 55.000 15.89 0.00 41.31 2.29
250 251 1.354705 GGGACTGTAGGCCCTTTTTCT 59.645 52.381 15.89 0.00 41.31 2.52
251 252 2.574824 GGGACTGTAGGCCCTTTTTCTA 59.425 50.000 15.89 0.00 41.31 2.10
252 253 3.607741 GGACTGTAGGCCCTTTTTCTAC 58.392 50.000 0.00 0.00 35.29 2.59
253 254 3.263681 GGACTGTAGGCCCTTTTTCTACT 59.736 47.826 0.00 0.00 35.63 2.57
254 255 4.468868 GGACTGTAGGCCCTTTTTCTACTA 59.531 45.833 0.00 0.00 35.63 1.82
255 256 5.395435 GGACTGTAGGCCCTTTTTCTACTAG 60.395 48.000 0.00 0.00 35.63 2.57
256 257 5.092259 ACTGTAGGCCCTTTTTCTACTAGT 58.908 41.667 0.00 0.00 35.63 2.57
257 258 5.046520 ACTGTAGGCCCTTTTTCTACTAGTG 60.047 44.000 5.39 0.00 35.63 2.74
258 259 3.351794 AGGCCCTTTTTCTACTAGTGC 57.648 47.619 5.39 0.00 0.00 4.40
259 260 2.026169 AGGCCCTTTTTCTACTAGTGCC 60.026 50.000 5.39 6.30 36.62 5.01
260 261 2.290705 GGCCCTTTTTCTACTAGTGCCA 60.291 50.000 5.39 0.00 36.40 4.92
261 262 3.621558 GCCCTTTTTCTACTAGTGCCAT 58.378 45.455 5.39 0.00 0.00 4.40
262 263 3.378427 GCCCTTTTTCTACTAGTGCCATG 59.622 47.826 5.39 0.00 0.00 3.66
263 264 4.843728 CCCTTTTTCTACTAGTGCCATGA 58.156 43.478 5.39 0.00 0.00 3.07
264 265 4.636206 CCCTTTTTCTACTAGTGCCATGAC 59.364 45.833 5.39 0.00 0.00 3.06
265 266 4.330074 CCTTTTTCTACTAGTGCCATGACG 59.670 45.833 5.39 0.00 0.00 4.35
266 267 3.520290 TTTCTACTAGTGCCATGACGG 57.480 47.619 5.39 0.00 38.11 4.79
267 268 1.399714 TCTACTAGTGCCATGACGGG 58.600 55.000 5.39 0.00 34.06 5.28
286 287 1.441738 GCATTCCCAAAAAGCGCATT 58.558 45.000 11.47 0.00 0.00 3.56
301 302 2.949644 GCGCATTCCAATAAACCTACCT 59.050 45.455 0.30 0.00 0.00 3.08
327 328 3.687698 GCGGGTGCATTAAAAAGTAGAGA 59.312 43.478 0.00 0.00 42.15 3.10
386 1244 7.272731 ACACGAGAAAAGTGAAAAGCTAAAAAC 59.727 33.333 3.20 0.00 41.83 2.43
387 1245 7.272515 CACGAGAAAAGTGAAAAGCTAAAAACA 59.727 33.333 0.00 0.00 41.83 2.83
388 1246 7.484959 ACGAGAAAAGTGAAAAGCTAAAAACAG 59.515 33.333 0.00 0.00 0.00 3.16
394 1252 7.992180 AGTGAAAAGCTAAAAACAGATGTTG 57.008 32.000 0.00 0.00 38.44 3.33
395 1253 7.547227 AGTGAAAAGCTAAAAACAGATGTTGT 58.453 30.769 0.00 0.00 43.45 3.32
397 1255 7.275560 GTGAAAAGCTAAAAACAGATGTTGTGT 59.724 33.333 0.00 0.00 40.74 3.72
410 1268 0.468400 GTTGTGTGGGTGGGCCTTAA 60.468 55.000 4.53 0.00 34.45 1.85
417 1275 0.392595 GGGTGGGCCTTAACTCTTCG 60.393 60.000 4.53 0.00 34.45 3.79
486 1344 0.755698 ACTCCATCACTCCCGCGTAT 60.756 55.000 4.92 0.00 0.00 3.06
544 1402 2.350895 CATGTGGAGCGTTCCCCA 59.649 61.111 16.38 11.25 43.33 4.96
573 1431 4.535781 CATGTCCCAACAATCCTATCCAA 58.464 43.478 0.00 0.00 39.30 3.53
576 1434 4.017591 TGTCCCAACAATCCTATCCAATGT 60.018 41.667 0.00 0.00 30.70 2.71
590 1448 2.564947 TCCAATGTGGGTGCATTAAACC 59.435 45.455 0.00 0.00 38.32 3.27
591 1449 2.301296 CCAATGTGGGTGCATTAAACCA 59.699 45.455 0.00 0.00 39.65 3.67
635 1493 2.688507 AGGTGCACGTGATCAAGTTAG 58.311 47.619 22.23 3.28 0.00 2.34
636 1494 1.128692 GGTGCACGTGATCAAGTTAGC 59.871 52.381 22.23 13.37 0.00 3.09
819 1857 8.857216 CACAAAAGCTCACAAATATTGATCTTC 58.143 33.333 0.00 0.00 30.10 2.87
820 1858 8.800332 ACAAAAGCTCACAAATATTGATCTTCT 58.200 29.630 0.00 0.00 30.10 2.85
900 1951 1.489481 AATCCACTCTCCATCTGCGA 58.511 50.000 0.00 0.00 0.00 5.10
917 2027 1.408266 GCGACTCTTCTCTCTCCTCCT 60.408 57.143 0.00 0.00 0.00 3.69
1063 2173 3.796443 TTCTCGACGGCGACCTCG 61.796 66.667 10.67 13.56 42.51 4.63
1097 2207 2.914695 ACCGTACTAGCAACAACCAA 57.085 45.000 0.00 0.00 0.00 3.67
1364 2511 4.421515 CTGCTGCACCTCCCAGGG 62.422 72.222 0.00 0.00 40.58 4.45
1407 2554 3.480470 CACATCACATCCCAGTAATCCC 58.520 50.000 0.00 0.00 0.00 3.85
1409 2556 2.168458 TCACATCCCAGTAATCCCGA 57.832 50.000 0.00 0.00 0.00 5.14
1418 2565 6.316280 TCCCAGTAATCCCGAGATTAAAAA 57.684 37.500 0.44 0.00 44.59 1.94
1431 2578 8.368668 CCCGAGATTAAAAATCCTAGTACTCAT 58.631 37.037 0.00 0.00 0.00 2.90
1444 2592 8.313944 TCCTAGTACTCATACTTAAAATGCCA 57.686 34.615 0.00 0.00 41.99 4.92
1471 2619 1.078143 CCTAGTTGGTGCAGAGGCC 60.078 63.158 0.00 0.00 40.13 5.19
1480 2628 4.785453 GCAGAGGCCGGGGAAGTG 62.785 72.222 2.18 0.00 0.00 3.16
1494 2642 2.225267 GGGAAGTGAAATTCTCCCCCAA 60.225 50.000 14.26 0.00 32.07 4.12
1501 2649 6.745857 AGTGAAATTCTCCCCCAATTTAGAT 58.254 36.000 0.00 0.00 34.30 1.98
1707 2879 2.265739 CTGCCCTGCTTCTGCGTA 59.734 61.111 0.00 0.00 43.34 4.42
1721 2893 0.974010 TGCGTAAGGAGTCCCGGATT 60.974 55.000 0.73 0.00 37.58 3.01
1794 2972 4.148825 GCGGTGGATCTGGCGTCT 62.149 66.667 0.00 0.00 0.00 4.18
1831 3009 3.675619 GATCCCGGTGGTCGTTGGG 62.676 68.421 0.00 0.00 43.36 4.12
1954 3140 1.185618 TTCTGTACAGGAGGCGCTGT 61.186 55.000 22.48 6.26 37.57 4.40
2124 3311 0.538746 CCCTAACTTTGTTGGGCGGT 60.539 55.000 7.23 0.00 32.49 5.68
2194 3384 4.354162 GGGGTTGGGTGGCGCTTA 62.354 66.667 7.64 0.00 0.00 3.09
2246 3436 1.137872 GCCCTATCCTAGCATGGATCG 59.862 57.143 12.82 7.86 44.93 3.69
2251 3441 3.606595 ATCCTAGCATGGATCGTCATG 57.393 47.619 7.40 7.40 42.77 3.07
2252 3442 1.620323 TCCTAGCATGGATCGTCATGG 59.380 52.381 12.22 0.00 43.34 3.66
2253 3443 1.436600 CTAGCATGGATCGTCATGGC 58.563 55.000 12.22 0.00 43.34 4.40
2254 3444 0.319813 TAGCATGGATCGTCATGGCG 60.320 55.000 14.91 14.91 43.34 5.69
2255 3445 1.595109 GCATGGATCGTCATGGCGA 60.595 57.895 26.41 26.41 43.34 5.54
2256 3446 1.159713 GCATGGATCGTCATGGCGAA 61.160 55.000 27.96 11.16 44.38 4.70
2257 3447 0.863799 CATGGATCGTCATGGCGAAG 59.136 55.000 27.96 10.47 44.38 3.79
2258 3448 0.250038 ATGGATCGTCATGGCGAAGG 60.250 55.000 27.96 0.00 44.38 3.46
2259 3449 1.326951 TGGATCGTCATGGCGAAGGA 61.327 55.000 27.96 10.15 44.38 3.36
2260 3450 0.876342 GGATCGTCATGGCGAAGGAC 60.876 60.000 27.96 17.01 44.38 3.85
2261 3451 0.876342 GATCGTCATGGCGAAGGACC 60.876 60.000 27.96 9.78 44.38 4.46
2262 3452 1.330655 ATCGTCATGGCGAAGGACCT 61.331 55.000 27.96 5.88 44.38 3.85
2264 3454 2.109126 GTCATGGCGAAGGACCTGC 61.109 63.158 0.00 0.00 0.00 4.85
2269 3459 2.032681 GCGAAGGACCTGCCAAGT 59.967 61.111 0.00 0.00 40.02 3.16
2270 3460 2.035442 GCGAAGGACCTGCCAAGTC 61.035 63.158 0.00 0.00 40.02 3.01
2271 3461 1.371183 CGAAGGACCTGCCAAGTCA 59.629 57.895 0.00 0.00 40.02 3.41
2272 3462 0.250295 CGAAGGACCTGCCAAGTCAA 60.250 55.000 0.00 0.00 40.02 3.18
2273 3463 1.528129 GAAGGACCTGCCAAGTCAAG 58.472 55.000 0.00 0.00 40.02 3.02
2274 3464 0.111253 AAGGACCTGCCAAGTCAAGG 59.889 55.000 0.00 0.00 40.02 3.61
2292 3546 3.003113 GCTCGCGTAGGTGGAGGTT 62.003 63.158 5.77 0.00 0.00 3.50
2312 3577 3.418913 CGTTTGGCGTCGATGGCA 61.419 61.111 28.12 28.12 43.36 4.92
2370 3635 1.211457 AGATGGACCAGTGGAAGATGC 59.789 52.381 18.40 0.00 0.00 3.91
2372 3637 1.133181 TGGACCAGTGGAAGATGCCA 61.133 55.000 18.40 9.99 35.02 4.92
2386 3651 4.152625 GCCAGCGACGACACATGC 62.153 66.667 0.00 0.00 0.00 4.06
2431 3696 0.745486 CGAACATGGCAGATGGCTCA 60.745 55.000 7.95 0.00 44.01 4.26
2437 3702 2.725312 GGCAGATGGCTCAGTCGGA 61.725 63.158 0.00 0.00 44.01 4.55
2524 3789 6.382282 CCTTCATCATATGGATAGGAGTAGCA 59.618 42.308 2.13 0.00 33.95 3.49
2526 3791 6.497640 TCATCATATGGATAGGAGTAGCAGT 58.502 40.000 2.13 0.00 33.95 4.40
2563 3832 5.122707 TGGTGGATTCAGGCATATTGTTA 57.877 39.130 0.00 0.00 0.00 2.41
2681 3950 8.762481 AAATATTCCAGTAATCCCAGGTTAAC 57.238 34.615 0.00 0.00 0.00 2.01
2856 4125 2.765807 CCCTCGGCTCTCCCACAT 60.766 66.667 0.00 0.00 0.00 3.21
2898 4210 7.344093 TCCATCCTGCCATATGTTTTTATTGAA 59.656 33.333 1.24 0.00 0.00 2.69
3049 4365 1.594862 GCTCACAGATCGATTTTCGGG 59.405 52.381 0.00 0.00 40.88 5.14
3142 4458 7.675062 AGAGAAAACACTATGTCACTCTCAAT 58.325 34.615 13.21 0.00 34.43 2.57
3168 4484 8.087982 TGTTAATTCTAGTCTTGTTTGCTCAG 57.912 34.615 0.00 0.00 0.00 3.35
3391 4736 8.547967 TCACATTTCCTAGTGTCTACATTTTC 57.452 34.615 0.00 0.00 37.07 2.29
3468 4817 5.762179 AGGACAATGTGAGATAGTGGAAA 57.238 39.130 0.00 0.00 0.00 3.13
3630 4981 1.265365 GTTCTCTTCTTGGCTGTGCAC 59.735 52.381 10.75 10.75 0.00 4.57
3686 5041 6.217294 GGCTGTATCTCCAGTTCATAACTAC 58.783 44.000 0.00 0.00 40.46 2.73
3929 5286 1.882912 TCTGTGCGTTGAGAAATGCT 58.117 45.000 4.47 0.00 35.76 3.79
3970 5341 3.243035 ACACATACACACACACACAATGC 60.243 43.478 0.00 0.00 0.00 3.56
4088 5461 1.376609 CCGTTAAGGCTGGCCATGAC 61.377 60.000 5.51 2.19 38.92 3.06
4109 5482 1.372582 TCTGAATCGCTGGAATGTGC 58.627 50.000 0.00 0.00 0.00 4.57
4145 5519 8.543774 CATTATGGTCAGTAATCTTTCTCGTTC 58.456 37.037 0.00 0.00 0.00 3.95
4378 5780 2.158370 TGGGGTGAGTCACTGAGTCTTA 60.158 50.000 22.18 0.00 33.55 2.10
4386 5788 7.489757 GGTGAGTCACTGAGTCTTATATTGTTC 59.510 40.741 22.18 0.00 33.55 3.18
4390 5792 9.030452 AGTCACTGAGTCTTATATTGTTCTCTT 57.970 33.333 0.00 0.00 0.00 2.85
4393 5795 8.474025 CACTGAGTCTTATATTGTTCTCTTCCT 58.526 37.037 0.00 0.00 0.00 3.36
4405 5807 2.455557 TCTCTTCCTCTCTGCCTTCAG 58.544 52.381 0.00 0.00 41.67 3.02
4434 5837 5.482908 ACTTTCATGCGTATTCTCTGTTCT 58.517 37.500 0.00 0.00 0.00 3.01
4461 5864 1.926511 CTGAATGGTTGTGCCTCGGC 61.927 60.000 0.00 0.00 42.35 5.54
4482 5886 3.028850 CGGGACATGTTAGGTTCTAGGA 58.971 50.000 0.00 0.00 0.00 2.94
4513 5917 6.185114 AGATTAGGATAAATGTGCTCAGCT 57.815 37.500 0.00 0.00 0.00 4.24
4613 6024 8.818141 AAATCATATCTGTTACTACGTGATGG 57.182 34.615 0.00 0.00 0.00 3.51
4647 6058 6.094603 CAGAGAACATGGGAAAAGTATTCCTG 59.905 42.308 7.13 1.86 38.61 3.86
4649 6060 4.046286 ACATGGGAAAAGTATTCCTGCA 57.954 40.909 7.13 0.00 38.61 4.41
4660 6071 9.423061 GAAAAGTATTCCTGCAAACATGTTTAT 57.577 29.630 22.87 14.04 0.00 1.40
4793 6204 2.092323 GAAGACGGGCATAGGCTTTTT 58.908 47.619 0.00 0.00 37.02 1.94
4882 6293 3.851128 GGAGGCAGCGGAGTACCC 61.851 72.222 0.00 0.00 0.00 3.69
5022 6442 8.862325 TGGCACATTCTTTCTCTATTCTAAAA 57.138 30.769 0.00 0.00 0.00 1.52
5023 6443 9.295825 TGGCACATTCTTTCTCTATTCTAAAAA 57.704 29.630 0.00 0.00 0.00 1.94
5046 6466 2.043652 GGCATCCCCAGTGCATGT 60.044 61.111 0.00 0.00 44.25 3.21
5047 6467 1.227102 GGCATCCCCAGTGCATGTA 59.773 57.895 0.00 0.00 44.25 2.29
5048 6468 1.103398 GGCATCCCCAGTGCATGTAC 61.103 60.000 5.71 5.71 44.25 2.90
5049 6469 1.103398 GCATCCCCAGTGCATGTACC 61.103 60.000 10.59 0.00 42.08 3.34
5050 6470 0.548031 CATCCCCAGTGCATGTACCT 59.452 55.000 10.59 0.00 0.00 3.08
5051 6471 0.839946 ATCCCCAGTGCATGTACCTC 59.160 55.000 10.59 0.00 0.00 3.85
5052 6472 1.224592 CCCCAGTGCATGTACCTCC 59.775 63.158 10.59 0.00 0.00 4.30
5053 6473 1.224592 CCCAGTGCATGTACCTCCC 59.775 63.158 10.59 0.00 0.00 4.30
5054 6474 1.153369 CCAGTGCATGTACCTCCCG 60.153 63.158 10.59 0.00 0.00 5.14
5055 6475 1.815421 CAGTGCATGTACCTCCCGC 60.815 63.158 10.59 0.00 0.00 6.13
5056 6476 1.990060 AGTGCATGTACCTCCCGCT 60.990 57.895 10.59 0.00 0.00 5.52
5057 6477 1.078426 GTGCATGTACCTCCCGCTT 60.078 57.895 1.96 0.00 0.00 4.68
5058 6478 1.078497 TGCATGTACCTCCCGCTTG 60.078 57.895 0.00 0.00 0.00 4.01
5059 6479 2.472909 GCATGTACCTCCCGCTTGC 61.473 63.158 0.00 0.00 0.00 4.01
5060 6480 2.173669 CATGTACCTCCCGCTTGCG 61.174 63.158 8.14 8.14 0.00 4.85
5061 6481 4.752879 TGTACCTCCCGCTTGCGC 62.753 66.667 9.71 0.00 0.00 6.09
5062 6482 4.752879 GTACCTCCCGCTTGCGCA 62.753 66.667 5.66 5.66 35.30 6.09
5063 6483 4.451150 TACCTCCCGCTTGCGCAG 62.451 66.667 11.31 6.32 35.30 5.18
5075 6495 4.785453 GCGCAGGGTCTGGGGAAG 62.785 72.222 0.30 0.00 43.28 3.46
5076 6496 4.101448 CGCAGGGTCTGGGGAAGG 62.101 72.222 4.35 0.00 40.11 3.46
5077 6497 3.732849 GCAGGGTCTGGGGAAGGG 61.733 72.222 0.00 0.00 31.21 3.95
5078 6498 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
5079 6499 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
5080 6500 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
5081 6501 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
5082 6502 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
5083 6503 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
5084 6504 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
5085 6505 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
5086 6506 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
5087 6507 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
5088 6508 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
5089 6509 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
5090 6510 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
5091 6511 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
5092 6512 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
5093 6513 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
5103 6523 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
5104 6524 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
5105 6525 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
5106 6526 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
5107 6527 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
5108 6528 0.899019 TGGGTCTATTGTACGCAGCA 59.101 50.000 0.00 0.00 35.18 4.41
5109 6529 1.484653 TGGGTCTATTGTACGCAGCAT 59.515 47.619 0.00 0.00 35.18 3.79
5110 6530 2.093181 TGGGTCTATTGTACGCAGCATT 60.093 45.455 0.00 0.00 35.18 3.56
5111 6531 2.943033 GGGTCTATTGTACGCAGCATTT 59.057 45.455 0.00 0.00 0.00 2.32
5112 6532 3.002348 GGGTCTATTGTACGCAGCATTTC 59.998 47.826 0.00 0.00 0.00 2.17
5113 6533 3.002348 GGTCTATTGTACGCAGCATTTCC 59.998 47.826 0.00 0.00 0.00 3.13
5114 6534 3.002348 GTCTATTGTACGCAGCATTTCCC 59.998 47.826 0.00 0.00 0.00 3.97
5115 6535 2.128771 ATTGTACGCAGCATTTCCCT 57.871 45.000 0.00 0.00 0.00 4.20
5116 6536 1.164411 TTGTACGCAGCATTTCCCTG 58.836 50.000 0.00 0.00 0.00 4.45
5124 6544 2.888594 CAGCATTTCCCTGCATTTCTG 58.111 47.619 0.00 0.00 44.77 3.02
5139 6559 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
5140 6560 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
5141 6561 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
5142 6562 0.538057 TGCAAGAGGCTGTTTCCAGG 60.538 55.000 0.00 0.00 45.15 4.45
5143 6563 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
5144 6564 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
5145 6565 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
5146 6566 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
5147 6567 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
5148 6568 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
5149 6569 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
5150 6570 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
5151 6571 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
5152 6572 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
5153 6573 1.566703 TGTTTCCAGGACTTGAACCCA 59.433 47.619 0.00 0.00 0.00 4.51
5154 6574 2.176798 TGTTTCCAGGACTTGAACCCAT 59.823 45.455 0.00 0.00 0.00 4.00
5155 6575 2.558359 GTTTCCAGGACTTGAACCCATG 59.442 50.000 0.00 0.00 0.00 3.66
5156 6576 1.741028 TCCAGGACTTGAACCCATGA 58.259 50.000 0.00 0.00 0.00 3.07
5157 6577 1.351017 TCCAGGACTTGAACCCATGAC 59.649 52.381 0.00 0.00 0.00 3.06
5158 6578 1.614317 CCAGGACTTGAACCCATGACC 60.614 57.143 0.00 0.00 34.29 4.02
5159 6579 1.352352 CAGGACTTGAACCCATGACCT 59.648 52.381 0.00 0.00 40.96 3.85
5160 6580 1.630878 AGGACTTGAACCCATGACCTC 59.369 52.381 0.00 0.00 37.82 3.85
5161 6581 1.351017 GGACTTGAACCCATGACCTCA 59.649 52.381 0.00 0.00 32.45 3.86
5162 6582 2.025887 GGACTTGAACCCATGACCTCAT 60.026 50.000 0.00 0.00 36.96 2.90
5174 6594 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
5175 6595 0.037303 ACCTCATGGTCACAAGGCAG 59.963 55.000 0.00 0.00 44.78 4.85
5176 6596 1.310933 CCTCATGGTCACAAGGCAGC 61.311 60.000 0.00 0.00 0.00 5.25
5177 6597 0.607217 CTCATGGTCACAAGGCAGCA 60.607 55.000 0.00 0.00 0.00 4.41
5178 6598 0.607217 TCATGGTCACAAGGCAGCAG 60.607 55.000 0.00 0.00 0.00 4.24
5179 6599 1.975407 ATGGTCACAAGGCAGCAGC 60.975 57.895 0.00 0.00 41.10 5.25
5180 6600 2.282040 GGTCACAAGGCAGCAGCT 60.282 61.111 0.00 0.00 41.70 4.24
5181 6601 1.900498 GGTCACAAGGCAGCAGCTT 60.900 57.895 0.00 0.00 41.70 3.74
5182 6602 1.578423 GTCACAAGGCAGCAGCTTC 59.422 57.895 0.00 0.00 41.70 3.86
5183 6603 1.148949 TCACAAGGCAGCAGCTTCA 59.851 52.632 0.00 0.00 41.70 3.02
5291 6720 7.608153 AGTTTTTATTTCCCGAATTTAGTGGG 58.392 34.615 0.00 0.00 44.75 4.61
5304 6733 3.431411 TTAGTGGGGAGGTATGGACAT 57.569 47.619 0.00 0.00 0.00 3.06
5353 6782 1.473677 TGATTTGCTCAAAGCCCATCG 59.526 47.619 7.95 0.00 41.51 3.84
5376 6805 5.564651 CGAGCCATTTGGTTGAAATTGTAGT 60.565 40.000 0.00 0.00 37.57 2.73
5380 6809 6.366061 GCCATTTGGTTGAAATTGTAGTCTTC 59.634 38.462 0.00 0.00 37.57 2.87
5469 6899 5.902681 ACATGAAATCAGCCATCTCATTTG 58.097 37.500 0.00 0.00 0.00 2.32
5508 6939 2.440409 ACTCCAATCGAAATTGCTGCT 58.560 42.857 0.00 0.00 40.85 4.24
5602 7033 8.421249 TTGGAGTGTTGATGGAATTATTTCTT 57.579 30.769 0.00 0.00 32.16 2.52
5658 7089 2.222027 AGTTCCTTTTCCGCTCACTTG 58.778 47.619 0.00 0.00 0.00 3.16
5671 7102 3.486375 CGCTCACTTGCAGTTCCATAATG 60.486 47.826 0.00 0.00 0.00 1.90
5864 9242 7.538303 TCTGTGTTTGTGCTGTATATATGTG 57.462 36.000 0.00 0.00 0.00 3.21
5876 9254 8.458052 TGCTGTATATATGTGTTGACCAAAAAG 58.542 33.333 0.00 0.00 0.00 2.27
6002 9381 7.942990 AGAGCTATATACTTGTGTAAGTCACC 58.057 38.462 0.00 0.00 43.53 4.02
6008 9387 0.319211 TTGTGTAAGTCACCGAGCCG 60.319 55.000 0.00 0.00 45.61 5.52
6027 9406 6.909895 CGAGCCGAGATGATTATGATAGTTAG 59.090 42.308 0.00 0.00 0.00 2.34
6028 9407 7.414651 CGAGCCGAGATGATTATGATAGTTAGT 60.415 40.741 0.00 0.00 0.00 2.24
6029 9408 8.128322 AGCCGAGATGATTATGATAGTTAGTT 57.872 34.615 0.00 0.00 0.00 2.24
6030 9409 9.244292 AGCCGAGATGATTATGATAGTTAGTTA 57.756 33.333 0.00 0.00 0.00 2.24
6031 9410 9.509855 GCCGAGATGATTATGATAGTTAGTTAG 57.490 37.037 0.00 0.00 0.00 2.34
6077 9456 5.355071 TGCTTGTCATTGTTATCTAGCAAGG 59.645 40.000 0.00 0.00 36.25 3.61
6105 9512 4.022416 TCACATTTTGAGCACGCCTAAAAT 60.022 37.500 7.58 7.58 34.17 1.82
6147 9554 5.479306 TGTTCAGTGTCCTAATCTAACTGC 58.521 41.667 0.00 0.00 38.48 4.40
6259 9710 4.572985 TGCTCTGTTTGTCCTCAAAATG 57.427 40.909 0.00 0.00 43.78 2.32
6266 9717 4.402155 TGTTTGTCCTCAAAATGCAGTCTT 59.598 37.500 0.00 0.00 43.78 3.01
6303 9754 7.712639 ACAGTTGCTATTATCATCCAGTTACAG 59.287 37.037 0.00 0.00 0.00 2.74
6308 9759 7.233553 TGCTATTATCATCCAGTTACAGTAGCT 59.766 37.037 0.00 0.00 32.96 3.32
6309 9760 8.740906 GCTATTATCATCCAGTTACAGTAGCTA 58.259 37.037 0.00 0.00 0.00 3.32
6370 9851 3.004944 GTCAGTCAGTATAGCTAGTGGCC 59.995 52.174 0.00 0.00 43.05 5.36
6476 9968 5.415701 TGGTCTTCCAATAACTTGCAATCTC 59.584 40.000 0.00 0.00 41.25 2.75
6532 10363 4.884668 AACTAACTCGATGGAAGGTGAA 57.115 40.909 0.00 0.00 0.00 3.18
6533 10364 5.422214 AACTAACTCGATGGAAGGTGAAT 57.578 39.130 0.00 0.00 0.00 2.57
6557 10388 7.050970 TGTGGCAGATTACTAGTTACCTATG 57.949 40.000 0.00 0.00 0.00 2.23
6720 10571 8.410141 TGATTTCATAAAAGTGAACGGTTTCTT 58.590 29.630 0.00 0.93 37.80 2.52
6744 10595 4.764308 TCTGTCTCGATCTGGATTATCAGG 59.236 45.833 0.00 0.00 35.58 3.86
6846 10710 4.718961 ACTGTAGGCAATGAGTTTTCAGT 58.281 39.130 0.00 0.00 36.61 3.41
7038 10902 7.449934 AAAAAGAACAAATTCGTTACAGCTG 57.550 32.000 13.48 13.48 40.04 4.24
7046 10910 6.183360 ACAAATTCGTTACAGCTGTTCTTTCA 60.183 34.615 27.06 1.88 0.00 2.69
7094 10958 3.418995 TGGTGTCTACTCACAGGACTAC 58.581 50.000 0.00 0.00 39.76 2.73
7155 11019 3.244422 GGACCCTACAAATGCCGATATGA 60.244 47.826 0.00 0.00 0.00 2.15
7201 11074 1.003003 TCCATGTCTCCATGTTGCGAA 59.997 47.619 2.38 0.00 45.83 4.70
7233 11106 1.304381 TCCCACCTGCTTGATTGGC 60.304 57.895 0.00 0.00 0.00 4.52
7320 11193 7.301068 CAGTTCAATTTAAACTGCCAAAACA 57.699 32.000 14.40 0.00 44.94 2.83
7321 11194 7.746929 CAGTTCAATTTAAACTGCCAAAACAA 58.253 30.769 14.40 0.00 44.94 2.83
7322 11195 7.691877 CAGTTCAATTTAAACTGCCAAAACAAC 59.308 33.333 14.40 0.00 44.94 3.32
7323 11196 7.606073 AGTTCAATTTAAACTGCCAAAACAACT 59.394 29.630 2.85 0.00 35.68 3.16
7324 11197 7.913674 TCAATTTAAACTGCCAAAACAACTT 57.086 28.000 0.00 0.00 0.00 2.66
7325 11198 7.969314 TCAATTTAAACTGCCAAAACAACTTC 58.031 30.769 0.00 0.00 0.00 3.01
7326 11199 7.821846 TCAATTTAAACTGCCAAAACAACTTCT 59.178 29.630 0.00 0.00 0.00 2.85
7327 11200 8.450180 CAATTTAAACTGCCAAAACAACTTCTT 58.550 29.630 0.00 0.00 0.00 2.52
7328 11201 9.660180 AATTTAAACTGCCAAAACAACTTCTTA 57.340 25.926 0.00 0.00 0.00 2.10
7329 11202 9.830975 ATTTAAACTGCCAAAACAACTTCTTAT 57.169 25.926 0.00 0.00 0.00 1.73
7333 11206 9.830975 AAACTGCCAAAACAACTTCTTATATTT 57.169 25.926 0.00 0.00 0.00 1.40
7350 11223 9.095065 TCTTATATTTAGAGAAGACGTTTTGGC 57.905 33.333 0.00 0.00 0.00 4.52
7351 11224 8.780846 TTATATTTAGAGAAGACGTTTTGGCA 57.219 30.769 0.00 0.00 0.00 4.92
7352 11225 5.613358 ATTTAGAGAAGACGTTTTGGCAG 57.387 39.130 0.00 0.00 0.00 4.85
7353 11226 2.622064 AGAGAAGACGTTTTGGCAGT 57.378 45.000 0.00 0.00 0.00 4.40
7354 11227 2.919228 AGAGAAGACGTTTTGGCAGTT 58.081 42.857 0.00 0.00 0.00 3.16
7355 11228 2.872858 AGAGAAGACGTTTTGGCAGTTC 59.127 45.455 0.00 0.00 0.00 3.01
7356 11229 2.612212 GAGAAGACGTTTTGGCAGTTCA 59.388 45.455 0.00 0.00 0.00 3.18
7357 11230 3.013921 AGAAGACGTTTTGGCAGTTCAA 58.986 40.909 0.00 0.00 0.00 2.69
7358 11231 3.632145 AGAAGACGTTTTGGCAGTTCAAT 59.368 39.130 0.00 0.00 0.00 2.57
7359 11232 4.097892 AGAAGACGTTTTGGCAGTTCAATT 59.902 37.500 0.00 0.00 0.00 2.32
7360 11233 4.385358 AGACGTTTTGGCAGTTCAATTT 57.615 36.364 0.00 0.00 0.00 1.82
7361 11234 5.508200 AGACGTTTTGGCAGTTCAATTTA 57.492 34.783 0.00 0.00 0.00 1.40
7362 11235 5.897050 AGACGTTTTGGCAGTTCAATTTAA 58.103 33.333 0.00 0.00 0.00 1.52
7363 11236 6.334202 AGACGTTTTGGCAGTTCAATTTAAA 58.666 32.000 0.00 0.00 0.00 1.52
7364 11237 6.254804 AGACGTTTTGGCAGTTCAATTTAAAC 59.745 34.615 0.00 0.00 0.00 2.01
7365 11238 6.103330 ACGTTTTGGCAGTTCAATTTAAACT 58.897 32.000 0.00 0.00 37.44 2.66
7374 11247 7.301068 CAGTTCAATTTAAACTGCCAAAACA 57.699 32.000 14.40 0.00 44.94 2.83
7375 11248 7.746929 CAGTTCAATTTAAACTGCCAAAACAA 58.253 30.769 14.40 0.00 44.94 2.83
7423 11303 3.129792 GAAGTCCTTCTGGAGTGCG 57.870 57.895 0.00 0.00 44.84 5.34
7457 11337 4.859798 GTGTCTTGATGGTCTAAACTCGAG 59.140 45.833 11.84 11.84 0.00 4.04
7458 11338 3.860536 GTCTTGATGGTCTAAACTCGAGC 59.139 47.826 13.61 0.00 0.00 5.03
7459 11339 3.509967 TCTTGATGGTCTAAACTCGAGCA 59.490 43.478 13.61 0.08 42.30 4.26
7463 11343 3.232213 TGGTCTAAACTCGAGCATCAC 57.768 47.619 13.61 2.96 34.33 3.06
7464 11344 2.186076 GGTCTAAACTCGAGCATCACG 58.814 52.381 13.61 0.00 33.17 4.35
7465 11345 2.415625 GGTCTAAACTCGAGCATCACGT 60.416 50.000 13.61 0.00 33.17 4.49
7466 11346 2.594654 GTCTAAACTCGAGCATCACGTG 59.405 50.000 13.61 9.94 33.17 4.49
7467 11347 1.920574 CTAAACTCGAGCATCACGTGG 59.079 52.381 17.00 0.92 33.17 4.94
7468 11348 0.317160 AAACTCGAGCATCACGTGGA 59.683 50.000 17.00 2.56 33.17 4.02
7469 11349 0.532573 AACTCGAGCATCACGTGGAT 59.467 50.000 17.00 5.18 36.39 3.41
7470 11350 0.532573 ACTCGAGCATCACGTGGATT 59.467 50.000 17.00 0.00 32.57 3.01
7471 11351 1.066858 ACTCGAGCATCACGTGGATTT 60.067 47.619 17.00 0.00 32.57 2.17
7472 11352 2.165641 ACTCGAGCATCACGTGGATTTA 59.834 45.455 17.00 0.00 32.57 1.40
7473 11353 3.186909 CTCGAGCATCACGTGGATTTAA 58.813 45.455 17.00 0.00 32.57 1.52
7474 11354 3.792401 TCGAGCATCACGTGGATTTAAT 58.208 40.909 17.00 0.00 32.57 1.40
7475 11355 3.555547 TCGAGCATCACGTGGATTTAATG 59.444 43.478 17.00 11.74 32.57 1.90
7476 11356 3.555547 CGAGCATCACGTGGATTTAATGA 59.444 43.478 17.00 0.00 32.57 2.57
7477 11357 4.212004 CGAGCATCACGTGGATTTAATGAT 59.788 41.667 17.00 9.46 32.57 2.45
7478 11358 5.277490 CGAGCATCACGTGGATTTAATGATT 60.277 40.000 17.00 3.12 32.57 2.57
7479 11359 6.455360 AGCATCACGTGGATTTAATGATTT 57.545 33.333 17.00 0.00 32.57 2.17
7480 11360 7.518211 CGAGCATCACGTGGATTTAATGATTTA 60.518 37.037 17.00 0.00 32.57 1.40
7481 11361 7.995289 AGCATCACGTGGATTTAATGATTTAA 58.005 30.769 17.00 0.00 32.57 1.52
7482 11362 8.131100 AGCATCACGTGGATTTAATGATTTAAG 58.869 33.333 17.00 0.00 32.57 1.85
7483 11363 8.128582 GCATCACGTGGATTTAATGATTTAAGA 58.871 33.333 17.00 0.00 32.57 2.10
7486 11366 9.613428 TCACGTGGATTTAATGATTTAAGATCT 57.387 29.630 17.00 0.00 0.00 2.75
7487 11367 9.869844 CACGTGGATTTAATGATTTAAGATCTC 57.130 33.333 7.95 0.00 0.00 2.75
7488 11368 8.765219 ACGTGGATTTAATGATTTAAGATCTCG 58.235 33.333 0.00 0.00 31.47 4.04
7489 11369 8.978539 CGTGGATTTAATGATTTAAGATCTCGA 58.021 33.333 0.00 0.00 0.00 4.04
7493 11373 9.804547 GATTTAATGATTTAAGATCTCGAGCAC 57.195 33.333 7.81 4.01 0.00 4.40
7620 11511 2.034939 TGCATGCCTTTGTTCTGTTCAG 59.965 45.455 16.68 0.00 0.00 3.02
7675 12032 1.066215 GCCCATTGCTTACCCCAAAAG 60.066 52.381 0.00 0.00 36.87 2.27
7681 12038 5.874261 CCATTGCTTACCCCAAAAGTATTTG 59.126 40.000 0.00 0.00 44.50 2.32
7841 12202 3.415212 TGCCTGTCATTCTCTTTTCCTG 58.585 45.455 0.00 0.00 0.00 3.86
7843 12204 4.041567 TGCCTGTCATTCTCTTTTCCTGTA 59.958 41.667 0.00 0.00 0.00 2.74
8064 12425 3.754188 ATCACTCTGAAAAATGCGCTC 57.246 42.857 9.73 0.00 0.00 5.03
8173 12575 9.959721 ATGGAACCGCAGATATATTTTAGTATT 57.040 29.630 0.00 0.00 0.00 1.89
8174 12576 9.787435 TGGAACCGCAGATATATTTTAGTATTT 57.213 29.630 0.00 0.00 0.00 1.40
8334 12742 6.347061 AGATAGGATTCTTGGGGAATTTGT 57.653 37.500 0.00 0.00 43.90 2.83
8392 12800 3.281240 CCATCACCTGTTGCTGGC 58.719 61.111 0.00 0.00 34.72 4.85
8449 12858 3.308530 GGGCTCATCTTTGAAAAACACG 58.691 45.455 0.00 0.00 0.00 4.49
8450 12859 2.726241 GGCTCATCTTTGAAAAACACGC 59.274 45.455 0.00 0.00 0.00 5.34
8451 12860 3.550842 GGCTCATCTTTGAAAAACACGCT 60.551 43.478 0.00 0.00 0.00 5.07
8455 12866 4.574421 TCATCTTTGAAAAACACGCTCTCA 59.426 37.500 0.00 0.00 0.00 3.27
8462 12873 2.218953 AAACACGCTCTCAAGACGAA 57.781 45.000 0.00 0.00 0.00 3.85
8471 12882 2.035961 CTCTCAAGACGAACCAGTGGAA 59.964 50.000 18.40 0.00 0.00 3.53
8477 12888 5.046591 TCAAGACGAACCAGTGGAAGAATAT 60.047 40.000 18.40 0.00 0.00 1.28
8485 12896 2.889045 CAGTGGAAGAATATGGGCATGG 59.111 50.000 0.00 0.00 0.00 3.66
8507 12920 0.532115 GGTGCGCCCATGAAAGAAAT 59.468 50.000 4.45 0.00 0.00 2.17
8508 12921 1.469767 GGTGCGCCCATGAAAGAAATC 60.470 52.381 4.45 0.00 0.00 2.17
8510 12923 1.202114 TGCGCCCATGAAAGAAATCAC 59.798 47.619 4.18 0.00 30.82 3.06
8513 12930 3.504863 CGCCCATGAAAGAAATCACAAG 58.495 45.455 0.00 0.00 30.82 3.16
8515 12932 3.511146 GCCCATGAAAGAAATCACAAGGA 59.489 43.478 0.00 0.00 30.82 3.36
8537 12954 5.438761 AAAAACAACATAGACTGCAGTCC 57.561 39.130 37.09 22.21 45.85 3.85
8554 12971 1.686355 TCCGCTGGACAAAAATGTGT 58.314 45.000 0.00 0.00 0.00 3.72
8559 12976 3.245048 CGCTGGACAAAAATGTGTTTTCC 59.755 43.478 0.00 0.00 36.55 3.13
8560 12977 4.187694 GCTGGACAAAAATGTGTTTTCCA 58.812 39.130 0.00 0.00 36.55 3.53
8561 12978 4.815846 GCTGGACAAAAATGTGTTTTCCAT 59.184 37.500 0.00 0.00 36.55 3.41
8562 12979 5.277442 GCTGGACAAAAATGTGTTTTCCATG 60.277 40.000 0.00 0.00 36.55 3.66
8572 12992 7.721286 AATGTGTTTTCCATGCGAATAAAAA 57.279 28.000 0.00 0.00 0.00 1.94
8700 13122 5.842907 ACAACAGAAACTAAAAGGAATGGC 58.157 37.500 0.00 0.00 0.00 4.40
8705 13127 4.217767 AGAAACTAAAAGGAATGGCGGAAC 59.782 41.667 0.00 0.00 0.00 3.62
8707 13129 3.697166 ACTAAAAGGAATGGCGGAACAT 58.303 40.909 0.00 0.00 0.00 2.71
8708 13130 4.850680 ACTAAAAGGAATGGCGGAACATA 58.149 39.130 0.00 0.00 0.00 2.29
8775 13197 7.361885 CGGATACTACGCCACTTATTCTAGAAT 60.362 40.741 21.28 21.28 34.93 2.40
8776 13198 7.969508 GGATACTACGCCACTTATTCTAGAATC 59.030 40.741 21.17 5.48 32.50 2.52
8777 13199 6.963083 ACTACGCCACTTATTCTAGAATCT 57.037 37.500 21.17 2.37 32.50 2.40
8778 13200 9.736414 ATACTACGCCACTTATTCTAGAATCTA 57.264 33.333 21.17 10.10 32.50 1.98
8779 13201 8.101654 ACTACGCCACTTATTCTAGAATCTAG 57.898 38.462 21.17 19.77 32.50 2.43
8780 13202 7.937942 ACTACGCCACTTATTCTAGAATCTAGA 59.062 37.037 21.17 15.47 32.50 2.43
8781 13203 7.584122 ACGCCACTTATTCTAGAATCTAGAA 57.416 36.000 28.49 28.49 37.87 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 1.630878 TGTGGCTGGGGTTTTTGTTTT 59.369 42.857 0.00 0.00 0.00 2.43
11 12 1.342975 ACTTCTGTGGCTGGGGTTTTT 60.343 47.619 0.00 0.00 0.00 1.94
12 13 0.261696 ACTTCTGTGGCTGGGGTTTT 59.738 50.000 0.00 0.00 0.00 2.43
13 14 0.468029 CACTTCTGTGGCTGGGGTTT 60.468 55.000 0.00 0.00 40.33 3.27
14 15 1.151450 CACTTCTGTGGCTGGGGTT 59.849 57.895 0.00 0.00 40.33 4.11
15 16 2.839098 CACTTCTGTGGCTGGGGT 59.161 61.111 0.00 0.00 40.33 4.95
18 19 1.071987 TCAGCACTTCTGTGGCTGG 59.928 57.895 12.33 0.00 42.70 4.85
20 21 1.301244 CGTCAGCACTTCTGTGGCT 60.301 57.895 0.00 0.00 43.97 4.75
21 22 2.959357 GCGTCAGCACTTCTGTGGC 61.959 63.158 0.00 0.00 43.97 5.01
22 23 2.661566 CGCGTCAGCACTTCTGTGG 61.662 63.158 0.00 0.00 45.49 4.17
23 24 1.951130 ACGCGTCAGCACTTCTGTG 60.951 57.895 5.58 0.00 45.49 3.66
24 25 1.951130 CACGCGTCAGCACTTCTGT 60.951 57.895 9.86 0.00 45.49 3.41
26 27 2.159819 ATCCACGCGTCAGCACTTCT 62.160 55.000 9.86 0.00 45.49 2.85
27 28 1.738099 ATCCACGCGTCAGCACTTC 60.738 57.895 9.86 0.00 45.49 3.01
28 29 2.029288 CATCCACGCGTCAGCACTT 61.029 57.895 9.86 0.00 45.49 3.16
29 30 2.433145 CATCCACGCGTCAGCACT 60.433 61.111 9.86 0.00 45.49 4.40
33 34 0.530650 AATAGGCATCCACGCGTCAG 60.531 55.000 9.86 3.57 0.00 3.51
34 35 0.809636 CAATAGGCATCCACGCGTCA 60.810 55.000 9.86 0.00 0.00 4.35
35 36 1.498865 CCAATAGGCATCCACGCGTC 61.499 60.000 9.86 0.00 0.00 5.19
38 39 1.166531 GGACCAATAGGCATCCACGC 61.167 60.000 0.00 0.00 39.06 5.34
40 41 0.535102 CGGGACCAATAGGCATCCAC 60.535 60.000 0.00 0.00 39.06 4.02
41 42 1.705002 CCGGGACCAATAGGCATCCA 61.705 60.000 0.00 0.00 39.06 3.41
42 43 1.073199 CCGGGACCAATAGGCATCC 59.927 63.158 0.00 0.00 39.06 3.51
43 44 0.182775 AACCGGGACCAATAGGCATC 59.817 55.000 6.32 0.00 39.06 3.91
45 46 1.301623 CAACCGGGACCAATAGGCA 59.698 57.895 6.32 0.00 39.06 4.75
46 47 1.453197 CCAACCGGGACCAATAGGC 60.453 63.158 6.32 0.00 40.01 3.93
49 50 1.001887 GCACCAACCGGGACCAATA 60.002 57.895 6.32 0.00 41.15 1.90
51 52 4.589675 GGCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
66 67 4.589675 TTGGTCCCGGTTGGTGGC 62.590 66.667 0.00 0.00 34.77 5.01
69 70 2.518933 CCTTTGGTCCCGGTTGGT 59.481 61.111 0.00 0.00 34.77 3.67
70 71 2.989253 GCCTTTGGTCCCGGTTGG 60.989 66.667 0.00 0.00 0.00 3.77
72 73 4.295199 GGGCCTTTGGTCCCGGTT 62.295 66.667 0.84 0.00 42.67 4.44
78 79 2.361737 GCAGGAGGGCCTTTGGTC 60.362 66.667 7.89 0.00 43.90 4.02
88 89 3.795041 CTGAGCCCAGGCAGGAGG 61.795 72.222 12.03 0.00 44.88 4.30
106 107 4.742201 CTCCACGTGGCCTGTCCG 62.742 72.222 30.25 3.58 37.80 4.79
107 108 4.394712 CCTCCACGTGGCCTGTCC 62.395 72.222 30.25 0.00 34.44 4.02
120 121 3.866582 CGGGACAGATGGGCCTCC 61.867 72.222 4.53 2.00 0.00 4.30
121 122 3.866582 CCGGGACAGATGGGCCTC 61.867 72.222 4.53 0.00 0.00 4.70
122 123 4.741239 ACCGGGACAGATGGGCCT 62.741 66.667 6.32 0.00 0.00 5.19
123 124 3.699134 GAACCGGGACAGATGGGCC 62.699 68.421 6.32 0.00 0.00 5.80
124 125 2.124695 GAACCGGGACAGATGGGC 60.125 66.667 6.32 0.00 0.00 5.36
125 126 1.221840 CAGAACCGGGACAGATGGG 59.778 63.158 6.32 0.00 0.00 4.00
126 127 1.221840 CCAGAACCGGGACAGATGG 59.778 63.158 6.32 0.80 0.00 3.51
127 128 0.833287 ATCCAGAACCGGGACAGATG 59.167 55.000 6.32 0.00 37.23 2.90
128 129 1.210478 CAATCCAGAACCGGGACAGAT 59.790 52.381 6.32 3.35 37.23 2.90
129 130 0.613260 CAATCCAGAACCGGGACAGA 59.387 55.000 6.32 0.92 37.23 3.41
130 131 0.613260 TCAATCCAGAACCGGGACAG 59.387 55.000 6.32 0.00 37.23 3.51
131 132 1.060729 TTCAATCCAGAACCGGGACA 58.939 50.000 6.32 0.00 37.23 4.02
132 133 1.450025 GTTCAATCCAGAACCGGGAC 58.550 55.000 6.32 0.00 41.52 4.46
133 134 3.948735 GTTCAATCCAGAACCGGGA 57.051 52.632 6.32 0.00 41.52 5.14
138 139 1.003233 AGTCCCGGTTCAATCCAGAAC 59.997 52.381 0.00 0.00 45.50 3.01
139 140 1.358152 AGTCCCGGTTCAATCCAGAA 58.642 50.000 0.00 0.00 0.00 3.02
140 141 2.241281 TAGTCCCGGTTCAATCCAGA 57.759 50.000 0.00 0.00 0.00 3.86
141 142 3.270877 CTTTAGTCCCGGTTCAATCCAG 58.729 50.000 0.00 0.00 0.00 3.86
142 143 2.026636 CCTTTAGTCCCGGTTCAATCCA 60.027 50.000 0.00 0.00 0.00 3.41
143 144 2.640184 CCTTTAGTCCCGGTTCAATCC 58.360 52.381 0.00 0.00 0.00 3.01
144 145 2.026542 ACCCTTTAGTCCCGGTTCAATC 60.027 50.000 0.00 0.00 0.00 2.67
145 146 1.990327 ACCCTTTAGTCCCGGTTCAAT 59.010 47.619 0.00 0.00 0.00 2.57
146 147 1.348696 GACCCTTTAGTCCCGGTTCAA 59.651 52.381 0.00 0.00 0.00 2.69
147 148 0.978907 GACCCTTTAGTCCCGGTTCA 59.021 55.000 0.00 0.00 0.00 3.18
148 149 0.978907 TGACCCTTTAGTCCCGGTTC 59.021 55.000 0.00 0.00 35.83 3.62
149 150 0.981943 CTGACCCTTTAGTCCCGGTT 59.018 55.000 0.00 0.00 35.83 4.44
150 151 0.908180 CCTGACCCTTTAGTCCCGGT 60.908 60.000 0.00 0.00 35.83 5.28
151 152 1.623542 CCCTGACCCTTTAGTCCCGG 61.624 65.000 0.00 0.00 35.83 5.73
152 153 1.905512 CCCTGACCCTTTAGTCCCG 59.094 63.158 0.00 0.00 35.83 5.14
153 154 1.205460 TGCCCTGACCCTTTAGTCCC 61.205 60.000 0.00 0.00 35.83 4.46
154 155 0.919710 ATGCCCTGACCCTTTAGTCC 59.080 55.000 0.00 0.00 35.83 3.85
155 156 2.808906 AATGCCCTGACCCTTTAGTC 57.191 50.000 0.00 0.00 37.28 2.59
156 157 3.190439 ACTAATGCCCTGACCCTTTAGT 58.810 45.455 0.00 0.00 31.21 2.24
157 158 3.933861 ACTAATGCCCTGACCCTTTAG 57.066 47.619 0.00 0.00 0.00 1.85
158 159 3.457012 GGTACTAATGCCCTGACCCTTTA 59.543 47.826 0.00 0.00 0.00 1.85
159 160 2.241430 GGTACTAATGCCCTGACCCTTT 59.759 50.000 0.00 0.00 0.00 3.11
160 161 1.844497 GGTACTAATGCCCTGACCCTT 59.156 52.381 0.00 0.00 0.00 3.95
161 162 1.508256 GGTACTAATGCCCTGACCCT 58.492 55.000 0.00 0.00 0.00 4.34
162 163 0.106149 CGGTACTAATGCCCTGACCC 59.894 60.000 0.00 0.00 0.00 4.46
163 164 1.117150 TCGGTACTAATGCCCTGACC 58.883 55.000 0.00 0.00 0.00 4.02
164 165 1.202498 GGTCGGTACTAATGCCCTGAC 60.202 57.143 0.00 0.00 0.00 3.51
165 166 1.117150 GGTCGGTACTAATGCCCTGA 58.883 55.000 0.00 0.00 0.00 3.86
166 167 0.106149 GGGTCGGTACTAATGCCCTG 59.894 60.000 0.00 0.00 33.58 4.45
167 168 0.031414 AGGGTCGGTACTAATGCCCT 60.031 55.000 0.00 0.00 41.31 5.19
168 169 0.835276 AAGGGTCGGTACTAATGCCC 59.165 55.000 0.00 0.00 36.46 5.36
169 170 2.704464 AAAGGGTCGGTACTAATGCC 57.296 50.000 0.00 0.00 0.00 4.40
170 171 4.366586 GACTAAAGGGTCGGTACTAATGC 58.633 47.826 0.00 0.00 0.00 3.56
171 172 4.202192 GGGACTAAAGGGTCGGTACTAATG 60.202 50.000 0.00 0.00 37.12 1.90
172 173 3.963374 GGGACTAAAGGGTCGGTACTAAT 59.037 47.826 0.00 0.00 37.12 1.73
173 174 3.365472 GGGACTAAAGGGTCGGTACTAA 58.635 50.000 0.00 0.00 37.12 2.24
174 175 2.683742 CGGGACTAAAGGGTCGGTACTA 60.684 54.545 0.00 0.00 37.12 1.82
175 176 1.857965 GGGACTAAAGGGTCGGTACT 58.142 55.000 0.00 0.00 37.12 2.73
176 177 0.457443 CGGGACTAAAGGGTCGGTAC 59.543 60.000 0.00 0.00 37.12 3.34
177 178 0.684153 CCGGGACTAAAGGGTCGGTA 60.684 60.000 0.00 0.00 37.12 4.02
178 179 1.986210 CCGGGACTAAAGGGTCGGT 60.986 63.158 0.00 0.00 37.12 4.69
179 180 1.547472 AACCGGGACTAAAGGGTCGG 61.547 60.000 6.32 0.00 42.69 4.79
180 181 0.108472 GAACCGGGACTAAAGGGTCG 60.108 60.000 6.32 0.00 37.12 4.79
181 182 0.978907 TGAACCGGGACTAAAGGGTC 59.021 55.000 6.32 0.00 41.92 4.46
182 183 1.280998 CATGAACCGGGACTAAAGGGT 59.719 52.381 6.32 0.00 0.00 4.34
183 184 1.557832 TCATGAACCGGGACTAAAGGG 59.442 52.381 6.32 0.00 0.00 3.95
184 185 3.007635 GTTCATGAACCGGGACTAAAGG 58.992 50.000 25.26 0.00 35.36 3.11
196 197 3.007635 CCTTTAGTCCCGGTTCATGAAC 58.992 50.000 27.16 27.16 40.45 3.18
197 198 2.617021 GCCTTTAGTCCCGGTTCATGAA 60.617 50.000 3.38 3.38 0.00 2.57
198 199 1.065709 GCCTTTAGTCCCGGTTCATGA 60.066 52.381 0.00 0.00 0.00 3.07
199 200 1.379527 GCCTTTAGTCCCGGTTCATG 58.620 55.000 0.00 0.00 0.00 3.07
200 201 0.255033 GGCCTTTAGTCCCGGTTCAT 59.745 55.000 0.00 0.00 0.00 2.57
201 202 0.838987 AGGCCTTTAGTCCCGGTTCA 60.839 55.000 0.00 0.00 0.00 3.18
202 203 0.327259 AAGGCCTTTAGTCCCGGTTC 59.673 55.000 13.78 0.00 0.00 3.62
203 204 0.327259 GAAGGCCTTTAGTCCCGGTT 59.673 55.000 21.54 0.00 0.00 4.44
204 205 0.838987 TGAAGGCCTTTAGTCCCGGT 60.839 55.000 21.54 0.00 0.00 5.28
205 206 0.392595 GTGAAGGCCTTTAGTCCCGG 60.393 60.000 21.54 0.00 0.00 5.73
206 207 0.392595 GGTGAAGGCCTTTAGTCCCG 60.393 60.000 21.54 0.00 0.00 5.14
207 208 0.696501 TGGTGAAGGCCTTTAGTCCC 59.303 55.000 21.54 13.66 0.00 4.46
208 209 2.160205 GTTGGTGAAGGCCTTTAGTCC 58.840 52.381 21.54 18.52 0.00 3.85
209 210 2.160205 GGTTGGTGAAGGCCTTTAGTC 58.840 52.381 21.54 7.42 0.00 2.59
210 211 1.544759 CGGTTGGTGAAGGCCTTTAGT 60.545 52.381 21.54 0.00 0.00 2.24
211 212 1.165270 CGGTTGGTGAAGGCCTTTAG 58.835 55.000 21.54 0.00 0.00 1.85
212 213 0.250989 CCGGTTGGTGAAGGCCTTTA 60.251 55.000 21.54 13.72 0.00 1.85
213 214 1.530655 CCGGTTGGTGAAGGCCTTT 60.531 57.895 21.54 2.85 0.00 3.11
214 215 2.115266 CCGGTTGGTGAAGGCCTT 59.885 61.111 20.65 20.65 0.00 4.35
215 216 3.966543 CCCGGTTGGTGAAGGCCT 61.967 66.667 0.00 0.00 0.00 5.19
216 217 3.961414 TCCCGGTTGGTGAAGGCC 61.961 66.667 0.00 0.00 34.77 5.19
217 218 2.671963 GTCCCGGTTGGTGAAGGC 60.672 66.667 0.00 0.00 34.77 4.35
218 219 1.302511 CAGTCCCGGTTGGTGAAGG 60.303 63.158 0.00 0.00 34.77 3.46
219 220 0.682852 TACAGTCCCGGTTGGTGAAG 59.317 55.000 0.00 0.00 34.77 3.02
220 221 0.682852 CTACAGTCCCGGTTGGTGAA 59.317 55.000 0.00 0.00 34.77 3.18
221 222 1.189524 CCTACAGTCCCGGTTGGTGA 61.190 60.000 0.00 0.00 34.77 4.02
222 223 1.295423 CCTACAGTCCCGGTTGGTG 59.705 63.158 0.00 0.00 34.77 4.17
223 224 2.590114 GCCTACAGTCCCGGTTGGT 61.590 63.158 0.00 0.00 34.28 3.67
224 225 2.267961 GCCTACAGTCCCGGTTGG 59.732 66.667 0.00 0.00 34.79 3.77
225 226 2.267961 GGCCTACAGTCCCGGTTG 59.732 66.667 0.00 0.00 0.00 3.77
226 227 3.007323 GGGCCTACAGTCCCGGTT 61.007 66.667 0.84 0.00 32.00 4.44
230 231 1.354705 AGAAAAAGGGCCTACAGTCCC 59.645 52.381 6.41 0.00 42.94 4.46
231 232 2.881111 AGAAAAAGGGCCTACAGTCC 57.119 50.000 6.41 0.00 0.00 3.85
232 233 4.554960 AGTAGAAAAAGGGCCTACAGTC 57.445 45.455 6.41 2.06 36.22 3.51
233 234 5.046520 CACTAGTAGAAAAAGGGCCTACAGT 60.047 44.000 6.41 4.00 36.22 3.55
234 235 5.420409 CACTAGTAGAAAAAGGGCCTACAG 58.580 45.833 6.41 3.38 36.22 2.74
235 236 4.323257 GCACTAGTAGAAAAAGGGCCTACA 60.323 45.833 6.41 0.00 36.22 2.74
236 237 4.190001 GCACTAGTAGAAAAAGGGCCTAC 58.810 47.826 6.41 0.00 33.42 3.18
237 238 4.482952 GCACTAGTAGAAAAAGGGCCTA 57.517 45.455 6.41 0.00 33.42 3.93
238 239 3.351794 GCACTAGTAGAAAAAGGGCCT 57.648 47.619 0.00 0.00 33.42 5.19
240 241 3.067684 TGGCACTAGTAGAAAAAGGGC 57.932 47.619 3.59 0.00 38.98 5.19
241 242 4.636206 GTCATGGCACTAGTAGAAAAAGGG 59.364 45.833 3.59 0.00 0.00 3.95
242 243 4.330074 CGTCATGGCACTAGTAGAAAAAGG 59.670 45.833 3.59 0.00 0.00 3.11
243 244 4.330074 CCGTCATGGCACTAGTAGAAAAAG 59.670 45.833 3.59 0.00 0.00 2.27
244 245 4.250464 CCGTCATGGCACTAGTAGAAAAA 58.750 43.478 3.59 0.00 0.00 1.94
245 246 3.369052 CCCGTCATGGCACTAGTAGAAAA 60.369 47.826 3.59 0.00 35.87 2.29
246 247 2.167693 CCCGTCATGGCACTAGTAGAAA 59.832 50.000 3.59 0.00 35.87 2.52
247 248 1.754803 CCCGTCATGGCACTAGTAGAA 59.245 52.381 3.59 0.00 35.87 2.10
248 249 1.399714 CCCGTCATGGCACTAGTAGA 58.600 55.000 3.59 0.00 35.87 2.59
249 250 3.967886 CCCGTCATGGCACTAGTAG 57.032 57.895 0.00 0.00 35.87 2.57
266 267 0.391528 ATGCGCTTTTTGGGAATGCC 60.392 50.000 9.73 0.00 0.00 4.40
267 268 1.394572 GAATGCGCTTTTTGGGAATGC 59.605 47.619 9.73 0.00 0.00 3.56
268 269 2.001872 GGAATGCGCTTTTTGGGAATG 58.998 47.619 9.73 0.00 0.00 2.67
269 270 1.622811 TGGAATGCGCTTTTTGGGAAT 59.377 42.857 9.73 0.00 0.00 3.01
271 272 1.043816 TTGGAATGCGCTTTTTGGGA 58.956 45.000 9.73 0.00 0.00 4.37
274 275 4.690280 AGGTTTATTGGAATGCGCTTTTTG 59.310 37.500 9.73 0.00 0.00 2.44
286 287 3.133362 CCGCACTAGGTAGGTTTATTGGA 59.867 47.826 0.00 0.00 0.00 3.53
386 1244 1.526575 GCCCACCCACACAACATCTG 61.527 60.000 0.00 0.00 0.00 2.90
387 1245 1.228552 GCCCACCCACACAACATCT 60.229 57.895 0.00 0.00 0.00 2.90
388 1246 2.275380 GGCCCACCCACACAACATC 61.275 63.158 0.00 0.00 0.00 3.06
394 1252 0.608308 GAGTTAAGGCCCACCCACAC 60.608 60.000 0.00 0.00 36.11 3.82
395 1253 0.770557 AGAGTTAAGGCCCACCCACA 60.771 55.000 0.00 0.00 36.11 4.17
397 1255 0.696501 GAAGAGTTAAGGCCCACCCA 59.303 55.000 0.00 0.00 36.11 4.51
417 1275 1.796617 GCTACACACATCGTACGGGAC 60.797 57.143 16.52 0.00 0.00 4.46
426 1284 2.350772 GCAACAGTTGGCTACACACATC 60.351 50.000 15.28 0.00 0.00 3.06
428 1286 1.021202 GCAACAGTTGGCTACACACA 58.979 50.000 15.28 0.00 0.00 3.72
469 1327 1.040893 ACATACGCGGGAGTGATGGA 61.041 55.000 12.47 0.00 44.85 3.41
473 1331 2.795973 CGACATACGCGGGAGTGA 59.204 61.111 12.47 0.00 44.85 3.41
552 1410 4.879295 TTGGATAGGATTGTTGGGACAT 57.121 40.909 0.00 0.00 39.30 3.06
553 1411 4.017591 ACATTGGATAGGATTGTTGGGACA 60.018 41.667 0.00 0.00 0.00 4.02
564 1422 1.294041 TGCACCCACATTGGATAGGA 58.706 50.000 0.00 0.00 40.96 2.94
573 1431 1.543802 CGTGGTTTAATGCACCCACAT 59.456 47.619 16.65 0.00 46.13 3.21
576 1434 0.110678 TCCGTGGTTTAATGCACCCA 59.889 50.000 0.00 0.00 32.71 4.51
590 1448 1.663702 ACGAAAACGCTCCTCCGTG 60.664 57.895 0.00 0.00 41.90 4.94
591 1449 1.663702 CACGAAAACGCTCCTCCGT 60.664 57.895 0.00 0.00 44.41 4.69
592 1450 3.011760 GCACGAAAACGCTCCTCCG 62.012 63.158 0.00 0.00 0.00 4.63
785 1823 3.342719 TGTGAGCTTTTGTGTCAGACAA 58.657 40.909 4.32 0.00 43.11 3.18
789 1827 7.140705 TCAATATTTGTGAGCTTTTGTGTCAG 58.859 34.615 0.00 0.00 0.00 3.51
791 1829 8.025445 AGATCAATATTTGTGAGCTTTTGTGTC 58.975 33.333 0.00 0.00 38.56 3.67
792 1830 7.889469 AGATCAATATTTGTGAGCTTTTGTGT 58.111 30.769 0.00 0.00 38.56 3.72
793 1831 8.752766 AAGATCAATATTTGTGAGCTTTTGTG 57.247 30.769 1.43 0.00 46.66 3.33
900 1951 2.093128 GTCGAGGAGGAGAGAGAAGAGT 60.093 54.545 0.00 0.00 0.00 3.24
917 2027 1.306642 GGTCAAGAGAGAGCGGTCGA 61.307 60.000 9.28 0.00 0.00 4.20
946 2056 2.492090 GTCGGCTGCACTCGAGAT 59.508 61.111 21.68 0.00 36.00 2.75
1063 2173 1.221021 CGGTACCTTTGAGGAGGCC 59.779 63.158 10.90 0.00 40.65 5.19
1097 2207 0.916358 AGCAATAGGAGGCAGTGGGT 60.916 55.000 0.00 0.00 0.00 4.51
1365 2512 0.176680 ACTTGTGCATCTAGCCGAGG 59.823 55.000 0.00 0.00 44.83 4.63
1366 2513 1.284657 CACTTGTGCATCTAGCCGAG 58.715 55.000 0.00 0.00 44.83 4.63
1367 2514 0.740868 GCACTTGTGCATCTAGCCGA 60.741 55.000 19.36 0.00 44.83 5.54
1368 2515 1.020861 TGCACTTGTGCATCTAGCCG 61.021 55.000 22.47 0.00 44.83 5.52
1369 2516 2.858622 TGCACTTGTGCATCTAGCC 58.141 52.632 22.47 0.00 44.83 3.93
1418 2565 8.934697 TGGCATTTTAAGTATGAGTACTAGGAT 58.065 33.333 0.00 0.00 40.24 3.24
1444 2592 2.442878 TGCACCAACTAGGGATGCATAT 59.557 45.455 0.00 0.00 41.18 1.78
1452 2600 1.078143 GCCTCTGCACCAACTAGGG 60.078 63.158 0.00 0.00 43.89 3.53
1471 2619 1.682087 GGGGAGAATTTCACTTCCCCG 60.682 57.143 20.02 0.00 45.11 5.73
1480 2628 5.221521 GCCATCTAAATTGGGGGAGAATTTC 60.222 44.000 0.00 0.00 35.25 2.17
1494 2642 4.662179 TGAGGATCTTGGAGCCATCTAAAT 59.338 41.667 4.65 0.00 41.08 1.40
1501 2649 1.135094 GGATGAGGATCTTGGAGCCA 58.865 55.000 4.65 0.00 41.08 4.75
1524 2672 1.133792 GGGGGAGAGAGACTCAGAGAG 60.134 61.905 3.79 0.00 46.54 3.20
1707 2879 0.912486 CTCCAAATCCGGGACTCCTT 59.088 55.000 0.00 0.00 0.00 3.36
1810 2988 4.707768 ACGACCACCGGGATCCCA 62.708 66.667 30.42 0.00 43.93 4.37
1954 3140 0.912487 AACTAGATCCCCGCCACCAA 60.912 55.000 0.00 0.00 0.00 3.67
2216 3406 2.357517 GATAGGGCCGCATCACCG 60.358 66.667 14.16 0.00 0.00 4.94
2217 3407 1.192146 TAGGATAGGGCCGCATCACC 61.192 60.000 18.89 9.45 0.00 4.02
2218 3408 0.247736 CTAGGATAGGGCCGCATCAC 59.752 60.000 18.89 10.71 34.22 3.06
2219 3409 1.544825 GCTAGGATAGGGCCGCATCA 61.545 60.000 18.89 3.27 39.70 3.07
2246 3436 2.109126 GCAGGTCCTTCGCCATGAC 61.109 63.158 0.00 0.00 0.00 3.06
2251 3441 2.747855 CTTGGCAGGTCCTTCGCC 60.748 66.667 12.47 12.47 46.43 5.54
2252 3442 2.032681 ACTTGGCAGGTCCTTCGC 59.967 61.111 0.00 0.00 35.26 4.70
2253 3443 0.250295 TTGACTTGGCAGGTCCTTCG 60.250 55.000 24.65 0.00 35.26 3.79
2254 3444 1.528129 CTTGACTTGGCAGGTCCTTC 58.472 55.000 24.65 3.37 35.26 3.46
2255 3445 0.111253 CCTTGACTTGGCAGGTCCTT 59.889 55.000 24.65 0.00 35.26 3.36
2256 3446 1.763770 CCTTGACTTGGCAGGTCCT 59.236 57.895 24.65 0.00 35.26 3.85
2257 3447 4.404691 CCTTGACTTGGCAGGTCC 57.595 61.111 24.65 9.31 33.22 4.46
2264 3454 1.078759 CTACGCGAGCCTTGACTTGG 61.079 60.000 15.93 0.00 0.00 3.61
2266 3456 1.215647 CCTACGCGAGCCTTGACTT 59.784 57.895 15.93 0.00 0.00 3.01
2267 3457 1.977544 ACCTACGCGAGCCTTGACT 60.978 57.895 15.93 0.00 0.00 3.41
2269 3459 2.571757 CACCTACGCGAGCCTTGA 59.428 61.111 15.93 0.00 0.00 3.02
2270 3460 2.509336 CCACCTACGCGAGCCTTG 60.509 66.667 15.93 2.56 0.00 3.61
2271 3461 2.678934 TCCACCTACGCGAGCCTT 60.679 61.111 15.93 0.00 0.00 4.35
2272 3462 3.141488 CTCCACCTACGCGAGCCT 61.141 66.667 15.93 0.00 0.00 4.58
2273 3463 4.208686 CCTCCACCTACGCGAGCC 62.209 72.222 15.93 0.00 0.00 4.70
2274 3464 3.003113 AACCTCCACCTACGCGAGC 62.003 63.158 15.93 0.00 0.00 5.03
2370 3635 3.842126 CGCATGTGTCGTCGCTGG 61.842 66.667 0.00 0.00 0.00 4.85
2372 3637 2.504899 CTCGCATGTGTCGTCGCT 60.505 61.111 6.09 0.00 0.00 4.93
2445 3710 6.668283 TCTCACCTAAGCCTAACATCTAAAGT 59.332 38.462 0.00 0.00 0.00 2.66
2563 3832 5.950549 TCTCGAGGACCTTACAAAGTAGAAT 59.049 40.000 13.56 0.00 0.00 2.40
2659 3928 7.183112 TCAAGTTAACCTGGGATTACTGGAATA 59.817 37.037 0.88 0.00 34.01 1.75
2662 3931 4.847512 TCAAGTTAACCTGGGATTACTGGA 59.152 41.667 0.88 0.00 34.01 3.86
2681 3950 6.092533 ACCTGCAACAAAACAAAAGAATCAAG 59.907 34.615 0.00 0.00 0.00 3.02
2856 4125 0.106769 TGGAAGTTCAACAGGCTGCA 60.107 50.000 15.89 0.00 0.00 4.41
2898 4210 6.812160 GTCTGAACTTGGTGAATACGTAGATT 59.188 38.462 0.08 0.00 0.00 2.40
2980 4296 9.942850 CCAATTTACTTTACATTCCAATCCTTT 57.057 29.630 0.00 0.00 0.00 3.11
2981 4297 9.100197 ACCAATTTACTTTACATTCCAATCCTT 57.900 29.630 0.00 0.00 0.00 3.36
3049 4365 4.688021 AGAGTGACACAGTGTTTTCTCTC 58.312 43.478 20.67 18.15 31.69 3.20
3129 4445 9.950496 ACTAGAATTAACAATTGAGAGTGACAT 57.050 29.630 13.59 0.00 0.00 3.06
3142 4458 8.445275 TGAGCAAACAAGACTAGAATTAACAA 57.555 30.769 0.00 0.00 0.00 2.83
3168 4484 5.796350 TTTCTCTCCCGAAAATCGATTTC 57.204 39.130 22.93 14.91 43.74 2.17
3316 4634 5.450453 TGTCCAGGACCAAGTTTTCAAATA 58.550 37.500 17.59 0.00 0.00 1.40
3468 4817 3.575256 TCAATTCCAGTTGAAAGCAGCAT 59.425 39.130 0.00 0.00 36.33 3.79
3630 4981 6.593770 GGCCTTAACAAACCAGGATTTAATTG 59.406 38.462 0.00 0.00 0.00 2.32
3686 5041 7.283807 TCCACTTCTCATTACAATCATTCATGG 59.716 37.037 0.00 0.00 0.00 3.66
3945 5312 2.675348 TGTGTGTGTGTGTATGTGTGTG 59.325 45.455 0.00 0.00 0.00 3.82
3946 5313 2.979240 TGTGTGTGTGTGTATGTGTGT 58.021 42.857 0.00 0.00 0.00 3.72
3947 5314 4.281264 CATTGTGTGTGTGTGTATGTGTG 58.719 43.478 0.00 0.00 0.00 3.82
3948 5315 3.243035 GCATTGTGTGTGTGTGTATGTGT 60.243 43.478 0.00 0.00 0.00 3.72
3949 5316 3.299162 GCATTGTGTGTGTGTGTATGTG 58.701 45.455 0.00 0.00 0.00 3.21
3950 5317 2.032117 CGCATTGTGTGTGTGTGTATGT 60.032 45.455 0.00 0.00 33.61 2.29
3951 5318 2.573282 CGCATTGTGTGTGTGTGTATG 58.427 47.619 0.00 0.00 33.61 2.39
3952 5319 1.069296 GCGCATTGTGTGTGTGTGTAT 60.069 47.619 0.30 0.00 40.50 2.29
3953 5320 0.306228 GCGCATTGTGTGTGTGTGTA 59.694 50.000 0.30 0.00 40.50 2.90
3954 5321 1.063972 GCGCATTGTGTGTGTGTGT 59.936 52.632 0.30 0.00 40.50 3.72
3970 5341 7.013846 TGGAGTAATGGGGAAATAAAATAAGCG 59.986 37.037 0.00 0.00 0.00 4.68
4088 5461 2.223203 GCACATTCCAGCGATTCAGAAG 60.223 50.000 0.00 0.00 0.00 2.85
4109 5482 4.938080 ACTGACCATAATGAGTAGCTTCG 58.062 43.478 0.00 0.00 0.00 3.79
4124 5497 5.462530 TGAACGAGAAAGATTACTGACCA 57.537 39.130 0.00 0.00 0.00 4.02
4145 5519 5.091261 ACTACACTAAAGGAAGCTCCATG 57.909 43.478 5.21 0.00 39.61 3.66
4300 5702 8.494433 AGTAAGCATTTCAGGATATCAGGTAAA 58.506 33.333 4.83 0.23 0.00 2.01
4378 5780 4.968080 AGGCAGAGAGGAAGAGAACAATAT 59.032 41.667 0.00 0.00 0.00 1.28
4386 5788 1.481772 CCTGAAGGCAGAGAGGAAGAG 59.518 57.143 0.00 0.00 45.17 2.85
4390 5792 1.290431 AGATCCTGAAGGCAGAGAGGA 59.710 52.381 0.00 0.00 45.17 3.71
4393 5795 3.678965 AGTAGATCCTGAAGGCAGAGA 57.321 47.619 0.00 0.00 45.17 3.10
4405 5807 6.364706 CAGAGAATACGCATGAAAGTAGATCC 59.635 42.308 0.00 0.00 0.00 3.36
4434 5837 2.295909 GCACAACCATTCAGCCAACTAA 59.704 45.455 0.00 0.00 0.00 2.24
4461 5864 3.028850 TCCTAGAACCTAACATGTCCCG 58.971 50.000 0.00 0.00 0.00 5.14
4482 5886 9.193806 AGCACATTTATCCTAATCTTTCAACAT 57.806 29.630 0.00 0.00 0.00 2.71
4513 5917 5.472137 GGGTACAGTTGATGTAAAAGAAGCA 59.528 40.000 0.00 0.00 45.88 3.91
4613 6024 3.706594 TCCCATGTTCTCTGTAGACCATC 59.293 47.826 0.00 0.00 32.94 3.51
4647 6058 9.619316 TTGATACTACACAATAAACATGTTTGC 57.381 29.630 29.72 4.22 34.23 3.68
4660 6071 5.066968 TCTGCGTCATTGATACTACACAA 57.933 39.130 0.00 0.00 0.00 3.33
4676 6087 1.681264 TCACGATATGGTGATCTGCGT 59.319 47.619 15.71 0.00 41.76 5.24
4677 6088 2.422276 TCACGATATGGTGATCTGCG 57.578 50.000 15.71 0.00 41.76 5.18
4916 6327 9.282247 CAATGAAGAAAACTGGATAATTTCTCG 57.718 33.333 0.97 0.00 41.28 4.04
4925 6336 3.512724 CCAGGCAATGAAGAAAACTGGAT 59.487 43.478 0.00 0.00 45.14 3.41
5023 6443 1.194121 GCACTGGGGATGCCCTTTTT 61.194 55.000 24.41 1.61 44.66 1.94
5024 6444 1.610379 GCACTGGGGATGCCCTTTT 60.610 57.895 24.41 4.35 44.66 2.27
5025 6445 2.037847 GCACTGGGGATGCCCTTT 59.962 61.111 24.41 7.15 44.66 3.11
5026 6446 2.629498 ATGCACTGGGGATGCCCTT 61.629 57.895 24.41 7.56 44.66 3.95
5027 6447 3.025599 ATGCACTGGGGATGCCCT 61.026 61.111 24.41 0.00 44.66 5.19
5028 6448 2.836360 CATGCACTGGGGATGCCC 60.836 66.667 16.99 16.99 42.69 5.36
5032 6452 0.839946 GAGGTACATGCACTGGGGAT 59.160 55.000 0.00 0.00 0.00 3.85
5033 6453 1.271840 GGAGGTACATGCACTGGGGA 61.272 60.000 0.00 0.00 0.00 4.81
5034 6454 1.224592 GGAGGTACATGCACTGGGG 59.775 63.158 0.00 0.00 0.00 4.96
5035 6455 1.224592 GGGAGGTACATGCACTGGG 59.775 63.158 0.45 0.00 0.00 4.45
5036 6456 1.153369 CGGGAGGTACATGCACTGG 60.153 63.158 0.45 0.00 0.00 4.00
5037 6457 1.815421 GCGGGAGGTACATGCACTG 60.815 63.158 0.45 0.00 0.00 3.66
5038 6458 1.553690 AAGCGGGAGGTACATGCACT 61.554 55.000 0.45 0.00 41.46 4.40
5039 6459 1.078426 AAGCGGGAGGTACATGCAC 60.078 57.895 0.45 0.00 41.46 4.57
5040 6460 1.078497 CAAGCGGGAGGTACATGCA 60.078 57.895 0.45 0.00 41.46 3.96
5041 6461 2.472909 GCAAGCGGGAGGTACATGC 61.473 63.158 0.00 0.00 41.46 4.06
5042 6462 2.173669 CGCAAGCGGGAGGTACATG 61.174 63.158 6.55 0.00 41.46 3.21
5043 6463 2.186903 CGCAAGCGGGAGGTACAT 59.813 61.111 6.55 0.00 41.46 2.29
5058 6478 4.785453 CTTCCCCAGACCCTGCGC 62.785 72.222 0.00 0.00 0.00 6.09
5059 6479 4.101448 CCTTCCCCAGACCCTGCG 62.101 72.222 0.00 0.00 0.00 5.18
5060 6480 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
5061 6481 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
5062 6482 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
5063 6483 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
5064 6484 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
5065 6485 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
5066 6486 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
5067 6487 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
5068 6488 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
5069 6489 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
5070 6490 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
5071 6491 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
5072 6492 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
5073 6493 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
5074 6494 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
5075 6495 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
5076 6496 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
5077 6497 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
5082 6502 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
5083 6503 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
5084 6504 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
5085 6505 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
5086 6506 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
5087 6507 2.289756 TGCTGCGTACAATAGACCCAAA 60.290 45.455 0.00 0.00 0.00 3.28
5088 6508 1.276705 TGCTGCGTACAATAGACCCAA 59.723 47.619 0.00 0.00 0.00 4.12
5089 6509 0.899019 TGCTGCGTACAATAGACCCA 59.101 50.000 0.00 0.00 0.00 4.51
5090 6510 2.240493 ATGCTGCGTACAATAGACCC 57.760 50.000 0.00 0.00 0.00 4.46
5091 6511 3.002348 GGAAATGCTGCGTACAATAGACC 59.998 47.826 0.00 0.00 0.00 3.85
5092 6512 3.002348 GGGAAATGCTGCGTACAATAGAC 59.998 47.826 0.00 0.00 0.00 2.59
5093 6513 3.118408 AGGGAAATGCTGCGTACAATAGA 60.118 43.478 0.00 0.00 0.00 1.98
5094 6514 3.002656 CAGGGAAATGCTGCGTACAATAG 59.997 47.826 0.00 0.00 0.00 1.73
5095 6515 2.942376 CAGGGAAATGCTGCGTACAATA 59.058 45.455 0.00 0.00 0.00 1.90
5096 6516 1.745087 CAGGGAAATGCTGCGTACAAT 59.255 47.619 0.00 0.00 0.00 2.71
5097 6517 1.164411 CAGGGAAATGCTGCGTACAA 58.836 50.000 0.00 0.00 0.00 2.41
5098 6518 1.305219 GCAGGGAAATGCTGCGTACA 61.305 55.000 0.00 0.00 43.07 2.90
5099 6519 1.305219 TGCAGGGAAATGCTGCGTAC 61.305 55.000 0.00 0.00 46.63 3.67
5100 6520 0.394216 ATGCAGGGAAATGCTGCGTA 60.394 50.000 0.00 0.00 46.63 4.42
5101 6521 1.252904 AATGCAGGGAAATGCTGCGT 61.253 50.000 0.00 0.00 46.63 5.24
5102 6522 0.108520 AAATGCAGGGAAATGCTGCG 60.109 50.000 0.00 0.00 46.63 5.18
5103 6523 1.206371 AGAAATGCAGGGAAATGCTGC 59.794 47.619 0.00 0.00 46.63 5.25
5104 6524 2.888594 CAGAAATGCAGGGAAATGCTG 58.111 47.619 0.00 0.00 46.63 4.41
5105 6525 1.206371 GCAGAAATGCAGGGAAATGCT 59.794 47.619 0.00 0.00 46.63 3.79
5106 6526 1.066716 TGCAGAAATGCAGGGAAATGC 60.067 47.619 0.00 0.00 46.68 3.56
5107 6527 3.056393 TCTTGCAGAAATGCAGGGAAATG 60.056 43.478 11.70 0.00 46.21 2.32
5108 6528 3.167485 TCTTGCAGAAATGCAGGGAAAT 58.833 40.909 11.70 0.00 46.21 2.17
5109 6529 2.559668 CTCTTGCAGAAATGCAGGGAAA 59.440 45.455 11.70 0.00 46.21 3.13
5110 6530 2.165167 CTCTTGCAGAAATGCAGGGAA 58.835 47.619 11.70 0.00 46.21 3.97
5111 6531 1.615116 CCTCTTGCAGAAATGCAGGGA 60.615 52.381 11.70 9.29 46.21 4.20
5112 6532 0.815734 CCTCTTGCAGAAATGCAGGG 59.184 55.000 11.70 8.10 46.21 4.45
5113 6533 0.172803 GCCTCTTGCAGAAATGCAGG 59.827 55.000 6.04 6.04 46.21 4.85
5114 6534 1.135373 CAGCCTCTTGCAGAAATGCAG 60.135 52.381 2.87 0.00 46.21 4.41
5115 6535 0.885879 CAGCCTCTTGCAGAAATGCA 59.114 50.000 0.00 0.00 44.83 3.96
5116 6536 0.886563 ACAGCCTCTTGCAGAAATGC 59.113 50.000 0.00 0.00 44.83 3.56
5117 6537 3.572584 GAAACAGCCTCTTGCAGAAATG 58.427 45.455 0.00 0.00 44.83 2.32
5118 6538 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
5119 6539 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
5120 6540 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
5121 6541 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
5122 6542 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
5133 6553 1.566703 TGGGTTCAAGTCCTGGAAACA 59.433 47.619 0.00 0.00 32.36 2.83
5134 6554 2.358322 TGGGTTCAAGTCCTGGAAAC 57.642 50.000 0.00 0.00 0.00 2.78
5135 6555 2.445145 TCATGGGTTCAAGTCCTGGAAA 59.555 45.455 0.00 0.00 0.00 3.13
5136 6556 2.061848 TCATGGGTTCAAGTCCTGGAA 58.938 47.619 0.00 0.00 0.00 3.53
5137 6557 1.351017 GTCATGGGTTCAAGTCCTGGA 59.649 52.381 0.00 0.00 0.00 3.86
5138 6558 1.614317 GGTCATGGGTTCAAGTCCTGG 60.614 57.143 0.00 0.00 0.00 4.45
5139 6559 1.352352 AGGTCATGGGTTCAAGTCCTG 59.648 52.381 0.00 0.00 0.00 3.86
5140 6560 1.630878 GAGGTCATGGGTTCAAGTCCT 59.369 52.381 0.00 0.00 0.00 3.85
5141 6561 1.351017 TGAGGTCATGGGTTCAAGTCC 59.649 52.381 0.00 0.00 0.00 3.85
5142 6562 2.859165 TGAGGTCATGGGTTCAAGTC 57.141 50.000 0.00 0.00 0.00 3.01
5157 6577 1.310933 GCTGCCTTGTGACCATGAGG 61.311 60.000 0.00 0.00 42.21 3.86
5158 6578 0.607217 TGCTGCCTTGTGACCATGAG 60.607 55.000 0.00 0.00 0.00 2.90
5159 6579 0.607217 CTGCTGCCTTGTGACCATGA 60.607 55.000 0.00 0.00 0.00 3.07
5160 6580 1.880894 CTGCTGCCTTGTGACCATG 59.119 57.895 0.00 0.00 0.00 3.66
5161 6581 1.975407 GCTGCTGCCTTGTGACCAT 60.975 57.895 3.85 0.00 0.00 3.55
5162 6582 2.595463 GCTGCTGCCTTGTGACCA 60.595 61.111 3.85 0.00 0.00 4.02
5163 6583 1.860484 GAAGCTGCTGCCTTGTGACC 61.860 60.000 12.44 0.00 40.80 4.02
5164 6584 1.168407 TGAAGCTGCTGCCTTGTGAC 61.168 55.000 12.44 0.00 40.80 3.67
5165 6585 0.251033 ATGAAGCTGCTGCCTTGTGA 60.251 50.000 12.44 0.00 40.80 3.58
5166 6586 1.456296 TATGAAGCTGCTGCCTTGTG 58.544 50.000 12.44 0.00 40.80 3.33
5167 6587 2.431954 ATATGAAGCTGCTGCCTTGT 57.568 45.000 12.44 0.00 40.80 3.16
5168 6588 2.950309 AGAATATGAAGCTGCTGCCTTG 59.050 45.455 12.44 0.00 40.80 3.61
5169 6589 2.950309 CAGAATATGAAGCTGCTGCCTT 59.050 45.455 12.44 6.01 40.80 4.35
5170 6590 2.573369 CAGAATATGAAGCTGCTGCCT 58.427 47.619 12.44 0.00 40.80 4.75
5176 6596 8.922058 ATTTGTTAAAGCAGAATATGAAGCTG 57.078 30.769 0.00 0.00 37.41 4.24
5195 6615 9.762933 ATGTTTCTTACACTGCATTAATTTGTT 57.237 25.926 0.00 0.00 40.19 2.83
5268 6697 6.724905 TCCCCACTAAATTCGGGAAATAAAAA 59.275 34.615 0.00 0.00 41.72 1.94
5269 6698 6.254522 TCCCCACTAAATTCGGGAAATAAAA 58.745 36.000 0.00 0.00 41.72 1.52
5291 6720 4.593206 TGGAATAGTCATGTCCATACCTCC 59.407 45.833 0.00 0.00 36.51 4.30
5304 6733 6.038161 CGCAGGAACAAATAATGGAATAGTCA 59.962 38.462 0.00 0.00 0.00 3.41
5353 6782 5.783111 ACTACAATTTCAACCAAATGGCTC 58.217 37.500 0.00 0.00 39.32 4.70
5398 6827 6.426328 GCACTATACTAGCAGAGCATTTCAAT 59.574 38.462 0.00 0.00 0.00 2.57
5469 6899 1.266989 GTTGTACCAAACTGCAGGAGC 59.733 52.381 19.93 1.44 42.57 4.70
5508 6939 2.494888 TATCCCATCTGCCTTGGAGA 57.505 50.000 0.00 0.00 36.26 3.71
5602 7033 5.695816 GCTTCAAACCAAAAGATTGCACATA 59.304 36.000 0.00 0.00 35.10 2.29
5658 7089 8.721478 CCACTATACATAACATTATGGAACTGC 58.279 37.037 14.53 0.00 43.69 4.40
5671 7102 8.513774 GGAAGACTACTAGCCACTATACATAAC 58.486 40.741 0.00 0.00 0.00 1.89
5681 7112 5.128008 AGAAGAATGGAAGACTACTAGCCAC 59.872 44.000 0.00 0.00 34.92 5.01
5751 9077 5.687285 GCGCTTATGGATAACATTTTTCTGG 59.313 40.000 0.00 0.00 41.03 3.86
6002 9381 5.242069 ACTATCATAATCATCTCGGCTCG 57.758 43.478 0.00 0.00 0.00 5.03
6030 9409 9.762933 AGCACATTTTTAATTGACATTGTAACT 57.237 25.926 0.00 0.00 0.00 2.24
6033 9412 9.539825 ACAAGCACATTTTTAATTGACATTGTA 57.460 25.926 0.00 0.00 0.00 2.41
6034 9413 8.436046 ACAAGCACATTTTTAATTGACATTGT 57.564 26.923 0.00 0.00 0.00 2.71
6049 9428 6.375174 TGCTAGATAACAATGACAAGCACATT 59.625 34.615 0.00 0.00 38.30 2.71
6077 9456 2.046313 CGTGCTCAAAATGTGAAGTGC 58.954 47.619 0.00 0.00 35.22 4.40
6093 9500 3.179048 GGATTGAACATTTTAGGCGTGC 58.821 45.455 0.00 0.00 0.00 5.34
6105 9512 4.974645 ACAGTTAGACAGGGATTGAACA 57.025 40.909 0.00 0.00 0.00 3.18
6241 9692 3.953612 ACTGCATTTTGAGGACAAACAGA 59.046 39.130 14.17 0.00 44.22 3.41
6259 9710 1.875514 TGTGAGCACAATCAAGACTGC 59.124 47.619 0.00 0.00 38.56 4.40
6266 9717 1.971481 AGCAACTGTGAGCACAATCA 58.029 45.000 4.72 0.00 41.33 2.57
6303 9754 2.950975 GGAGACCAGGTGTAGTAGCTAC 59.049 54.545 16.43 16.43 37.46 3.58
6308 9759 5.266709 ACTAAAGGAGACCAGGTGTAGTA 57.733 43.478 0.00 0.00 0.00 1.82
6309 9760 4.129317 ACTAAAGGAGACCAGGTGTAGT 57.871 45.455 0.00 0.00 0.00 2.73
6416 9906 7.758980 ACATGCTATTTTGTTATCATTTTGCGA 59.241 29.630 0.00 0.00 0.00 5.10
6417 9907 7.897920 ACATGCTATTTTGTTATCATTTTGCG 58.102 30.769 0.00 0.00 0.00 4.85
6519 10350 0.734889 GCCACATTCACCTTCCATCG 59.265 55.000 0.00 0.00 0.00 3.84
6520 10351 1.747355 CTGCCACATTCACCTTCCATC 59.253 52.381 0.00 0.00 0.00 3.51
6720 10571 5.242615 CCTGATAATCCAGATCGAGACAGAA 59.757 44.000 0.00 0.00 36.29 3.02
6744 10595 5.975693 TTTCATTGACCCCACTAACATTC 57.024 39.130 0.00 0.00 0.00 2.67
6846 10710 4.431416 TTGCAAGACCTTTTGGACTAGA 57.569 40.909 0.00 0.00 43.50 2.43
7034 10898 4.025040 TCATGGTCATGAAAGAACAGCT 57.975 40.909 10.83 0.00 44.14 4.24
7094 10958 0.946221 ACGTCTGAGCTGCTTTTCCG 60.946 55.000 2.53 7.36 0.00 4.30
7155 11019 8.956533 ACAAACAATTACCTTAAAGCATTTGT 57.043 26.923 0.00 0.00 39.63 2.83
7201 11074 1.271597 GGTGGGACTGCACAAGATTCT 60.272 52.381 0.00 0.00 0.00 2.40
7233 11106 6.120220 AGAAATAGTTCATCCTTTTACGGGG 58.880 40.000 5.62 0.00 36.09 5.73
7324 11197 9.095065 GCCAAAACGTCTTCTCTAAATATAAGA 57.905 33.333 0.00 0.00 0.00 2.10
7325 11198 8.879759 TGCCAAAACGTCTTCTCTAAATATAAG 58.120 33.333 0.00 0.00 0.00 1.73
7326 11199 8.780846 TGCCAAAACGTCTTCTCTAAATATAA 57.219 30.769 0.00 0.00 0.00 0.98
7327 11200 8.038944 ACTGCCAAAACGTCTTCTCTAAATATA 58.961 33.333 0.00 0.00 0.00 0.86
7328 11201 6.879458 ACTGCCAAAACGTCTTCTCTAAATAT 59.121 34.615 0.00 0.00 0.00 1.28
7329 11202 6.228258 ACTGCCAAAACGTCTTCTCTAAATA 58.772 36.000 0.00 0.00 0.00 1.40
7330 11203 5.063880 ACTGCCAAAACGTCTTCTCTAAAT 58.936 37.500 0.00 0.00 0.00 1.40
7331 11204 4.448210 ACTGCCAAAACGTCTTCTCTAAA 58.552 39.130 0.00 0.00 0.00 1.85
7332 11205 4.067972 ACTGCCAAAACGTCTTCTCTAA 57.932 40.909 0.00 0.00 0.00 2.10
7333 11206 3.746045 ACTGCCAAAACGTCTTCTCTA 57.254 42.857 0.00 0.00 0.00 2.43
7334 11207 2.622064 ACTGCCAAAACGTCTTCTCT 57.378 45.000 0.00 0.00 0.00 3.10
7335 11208 2.612212 TGAACTGCCAAAACGTCTTCTC 59.388 45.455 0.00 0.00 0.00 2.87
7336 11209 2.639065 TGAACTGCCAAAACGTCTTCT 58.361 42.857 0.00 0.00 0.00 2.85
7337 11210 3.414549 TTGAACTGCCAAAACGTCTTC 57.585 42.857 0.00 0.00 0.00 2.87
7338 11211 4.385358 AATTGAACTGCCAAAACGTCTT 57.615 36.364 0.00 0.00 0.00 3.01
7339 11212 4.385358 AAATTGAACTGCCAAAACGTCT 57.615 36.364 0.00 0.00 0.00 4.18
7340 11213 6.254804 AGTTTAAATTGAACTGCCAAAACGTC 59.745 34.615 2.22 0.00 36.08 4.34
7341 11214 6.035542 CAGTTTAAATTGAACTGCCAAAACGT 59.964 34.615 15.89 0.00 45.02 3.99
7342 11215 6.410038 CAGTTTAAATTGAACTGCCAAAACG 58.590 36.000 15.89 0.00 45.02 3.60
7351 11224 7.606073 AGTTGTTTTGGCAGTTTAAATTGAACT 59.394 29.630 14.30 9.55 37.82 3.01
7352 11225 7.747888 AGTTGTTTTGGCAGTTTAAATTGAAC 58.252 30.769 14.30 9.65 0.00 3.18
7353 11226 7.913674 AGTTGTTTTGGCAGTTTAAATTGAA 57.086 28.000 14.30 0.00 0.00 2.69
7354 11227 7.913674 AAGTTGTTTTGGCAGTTTAAATTGA 57.086 28.000 14.30 0.00 0.00 2.57
7457 11337 8.128582 TCTTAAATCATTAAATCCACGTGATGC 58.871 33.333 19.30 0.00 32.68 3.91
7460 11340 9.613428 AGATCTTAAATCATTAAATCCACGTGA 57.387 29.630 19.30 3.36 30.87 4.35
7461 11341 9.869844 GAGATCTTAAATCATTAAATCCACGTG 57.130 33.333 9.08 9.08 30.87 4.49
7462 11342 8.765219 CGAGATCTTAAATCATTAAATCCACGT 58.235 33.333 0.00 0.00 30.87 4.49
7463 11343 8.978539 TCGAGATCTTAAATCATTAAATCCACG 58.021 33.333 0.00 0.00 30.87 4.94
7465 11345 8.993121 GCTCGAGATCTTAAATCATTAAATCCA 58.007 33.333 18.75 0.00 30.87 3.41
7466 11346 8.993121 TGCTCGAGATCTTAAATCATTAAATCC 58.007 33.333 18.75 0.00 30.87 3.01
7467 11347 9.804547 GTGCTCGAGATCTTAAATCATTAAATC 57.195 33.333 18.75 0.00 30.87 2.17
7468 11348 8.778358 GGTGCTCGAGATCTTAAATCATTAAAT 58.222 33.333 18.75 0.00 30.87 1.40
7469 11349 7.768582 TGGTGCTCGAGATCTTAAATCATTAAA 59.231 33.333 18.75 0.00 30.87 1.52
7470 11350 7.224753 GTGGTGCTCGAGATCTTAAATCATTAA 59.775 37.037 18.75 0.00 0.00 1.40
7471 11351 6.701841 GTGGTGCTCGAGATCTTAAATCATTA 59.298 38.462 18.75 0.00 0.00 1.90
7472 11352 5.525378 GTGGTGCTCGAGATCTTAAATCATT 59.475 40.000 18.75 0.00 0.00 2.57
7473 11353 5.053145 GTGGTGCTCGAGATCTTAAATCAT 58.947 41.667 18.75 0.00 0.00 2.45
7474 11354 4.433615 GTGGTGCTCGAGATCTTAAATCA 58.566 43.478 18.75 0.00 0.00 2.57
7475 11355 3.487574 CGTGGTGCTCGAGATCTTAAATC 59.512 47.826 18.75 0.00 0.00 2.17
7476 11356 3.119101 ACGTGGTGCTCGAGATCTTAAAT 60.119 43.478 18.75 0.00 0.00 1.40
7477 11357 2.230508 ACGTGGTGCTCGAGATCTTAAA 59.769 45.455 18.75 0.00 0.00 1.52
7478 11358 1.816835 ACGTGGTGCTCGAGATCTTAA 59.183 47.619 18.75 0.00 0.00 1.85
7479 11359 1.132453 CACGTGGTGCTCGAGATCTTA 59.868 52.381 18.75 0.00 0.00 2.10
7480 11360 0.109086 CACGTGGTGCTCGAGATCTT 60.109 55.000 18.75 0.00 0.00 2.40
7481 11361 1.508545 CACGTGGTGCTCGAGATCT 59.491 57.895 18.75 0.00 0.00 2.75
7482 11362 1.517257 CCACGTGGTGCTCGAGATC 60.517 63.158 26.95 7.70 31.34 2.75
7483 11363 1.323271 ATCCACGTGGTGCTCGAGAT 61.323 55.000 32.74 14.49 36.34 2.75
7484 11364 1.532604 AATCCACGTGGTGCTCGAGA 61.533 55.000 32.74 12.68 36.34 4.04
7485 11365 0.670546 AAATCCACGTGGTGCTCGAG 60.671 55.000 32.74 8.45 36.34 4.04
7486 11366 0.604073 TAAATCCACGTGGTGCTCGA 59.396 50.000 32.74 14.26 36.34 4.04
7487 11367 1.434555 TTAAATCCACGTGGTGCTCG 58.565 50.000 32.74 7.72 36.34 5.03
7488 11368 3.006940 TCATTAAATCCACGTGGTGCTC 58.993 45.455 32.74 0.00 36.34 4.26
7489 11369 3.066291 TCATTAAATCCACGTGGTGCT 57.934 42.857 32.74 19.87 36.34 4.40
7493 11373 8.840321 AGATCTTAAATCATTAAATCCACGTGG 58.160 33.333 29.26 29.26 30.87 4.94
7524 11404 6.420913 ACAGTTCTAGCTCCAAACTCTTAA 57.579 37.500 0.00 0.00 31.04 1.85
7525 11405 6.350277 GCTACAGTTCTAGCTCCAAACTCTTA 60.350 42.308 0.00 0.00 36.88 2.10
7527 11407 4.081917 GCTACAGTTCTAGCTCCAAACTCT 60.082 45.833 0.00 0.00 36.88 3.24
7640 11997 2.718073 GGGCGGGCGAGACTTCTAA 61.718 63.158 0.00 0.00 0.00 2.10
7675 12032 1.659098 CTTCCCTGCGACGACAAATAC 59.341 52.381 0.00 0.00 0.00 1.89
7699 12056 0.827368 AGGATTCCTTGCCGTCTCTC 59.173 55.000 0.00 0.00 0.00 3.20
7841 12202 3.838244 TGCATACCTTGGACTGGATAC 57.162 47.619 0.00 0.00 0.00 2.24
7843 12204 2.750807 GCATGCATACCTTGGACTGGAT 60.751 50.000 14.21 0.00 0.00 3.41
8064 12425 3.997021 ACTGCTTAGATTTCACCTTGACG 59.003 43.478 0.00 0.00 0.00 4.35
8197 12599 0.966179 AAAATCCCGCTTTCCACACC 59.034 50.000 0.00 0.00 0.00 4.16
8392 12800 7.012894 TGTGTGGTTTCTAGTTAAATTCACCAG 59.987 37.037 0.00 0.00 30.82 4.00
8449 12858 1.423395 CACTGGTTCGTCTTGAGAGC 58.577 55.000 0.00 0.00 0.00 4.09
8450 12859 1.613925 TCCACTGGTTCGTCTTGAGAG 59.386 52.381 0.00 0.00 0.00 3.20
8451 12860 1.699730 TCCACTGGTTCGTCTTGAGA 58.300 50.000 0.00 0.00 0.00 3.27
8455 12866 3.771577 ATTCTTCCACTGGTTCGTCTT 57.228 42.857 0.00 0.00 0.00 3.01
8462 12873 1.922447 TGCCCATATTCTTCCACTGGT 59.078 47.619 0.00 0.00 0.00 4.00
8471 12882 1.426598 CACCCTCCATGCCCATATTCT 59.573 52.381 0.00 0.00 0.00 2.40
8498 12911 7.875041 TGTTGTTTTTCCTTGTGATTTCTTTCA 59.125 29.630 0.00 0.00 0.00 2.69
8501 12914 9.533253 CTATGTTGTTTTTCCTTGTGATTTCTT 57.467 29.630 0.00 0.00 0.00 2.52
8502 12915 8.912988 TCTATGTTGTTTTTCCTTGTGATTTCT 58.087 29.630 0.00 0.00 0.00 2.52
8503 12916 8.968242 GTCTATGTTGTTTTTCCTTGTGATTTC 58.032 33.333 0.00 0.00 0.00 2.17
8504 12917 8.695456 AGTCTATGTTGTTTTTCCTTGTGATTT 58.305 29.630 0.00 0.00 0.00 2.17
8507 12920 6.459573 GCAGTCTATGTTGTTTTTCCTTGTGA 60.460 38.462 0.00 0.00 0.00 3.58
8508 12921 5.687285 GCAGTCTATGTTGTTTTTCCTTGTG 59.313 40.000 0.00 0.00 0.00 3.33
8510 12923 5.830912 TGCAGTCTATGTTGTTTTTCCTTG 58.169 37.500 0.00 0.00 0.00 3.61
8513 12930 5.438761 ACTGCAGTCTATGTTGTTTTTCC 57.561 39.130 15.25 0.00 0.00 3.13
8515 12932 4.024048 CGGACTGCAGTCTATGTTGTTTTT 60.024 41.667 38.17 5.09 44.20 1.94
8537 12954 3.245048 GGAAAACACATTTTTGTCCAGCG 59.755 43.478 0.00 0.00 38.17 5.18
8549 12966 6.703607 TGTTTTTATTCGCATGGAAAACACAT 59.296 30.769 15.01 0.00 42.12 3.21
8550 12967 6.042777 TGTTTTTATTCGCATGGAAAACACA 58.957 32.000 15.01 0.64 42.12 3.72
8551 12968 6.517914 TGTTTTTATTCGCATGGAAAACAC 57.482 33.333 15.01 0.00 42.12 3.32
8553 12970 7.008859 CACATGTTTTTATTCGCATGGAAAAC 58.991 34.615 0.00 11.65 41.94 2.43
8554 12971 6.703607 ACACATGTTTTTATTCGCATGGAAAA 59.296 30.769 0.00 0.00 41.94 2.29
8559 12976 9.158364 GTATCTACACATGTTTTTATTCGCATG 57.842 33.333 0.00 0.00 42.93 4.06
8560 12977 8.888716 TGTATCTACACATGTTTTTATTCGCAT 58.111 29.630 0.00 0.00 0.00 4.73
8561 12978 8.257830 TGTATCTACACATGTTTTTATTCGCA 57.742 30.769 0.00 0.00 0.00 5.10
8700 13122 8.263940 TCTTTTTGTATTCCTTCTATGTTCCG 57.736 34.615 0.00 0.00 0.00 4.30
8705 13127 9.674824 GATGCATCTTTTTGTATTCCTTCTATG 57.325 33.333 19.70 0.00 0.00 2.23
8707 13129 8.806429 TGATGCATCTTTTTGTATTCCTTCTA 57.194 30.769 26.32 0.00 0.00 2.10
8708 13130 7.707624 TGATGCATCTTTTTGTATTCCTTCT 57.292 32.000 26.32 0.00 0.00 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.