Multiple sequence alignment - TraesCS2B01G136700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G136700 chr2B 100.000 3476 0 0 1 3476 103995931 103999406 0.000000e+00 6420.0
1 TraesCS2B01G136700 chr2B 92.771 332 19 3 3146 3476 695103321 695102994 3.140000e-130 475.0
2 TraesCS2B01G136700 chr2B 87.879 231 20 5 2121 2347 3650059 3650285 7.400000e-67 265.0
3 TraesCS2B01G136700 chr1A 98.627 1894 25 1 228 2120 395174278 395176171 0.000000e+00 3352.0
4 TraesCS2B01G136700 chr1D 98.363 1894 27 3 228 2120 314702352 314704242 0.000000e+00 3323.0
5 TraesCS2B01G136700 chr1D 91.931 979 49 10 2119 3068 6442782 6441805 0.000000e+00 1343.0
6 TraesCS2B01G136700 chr1D 91.251 983 51 13 2119 3068 6446546 6445566 0.000000e+00 1306.0
7 TraesCS2B01G136700 chr1D 94.146 820 44 2 2252 3068 6454218 6453400 0.000000e+00 1245.0
8 TraesCS2B01G136700 chr1D 93.773 819 45 4 2254 3068 6457956 6457140 0.000000e+00 1225.0
9 TraesCS2B01G136700 chr1D 88.845 1004 85 15 2119 3105 122252708 122251715 0.000000e+00 1208.0
10 TraesCS2B01G136700 chr1D 93.604 813 45 5 2260 3068 6438553 6437744 0.000000e+00 1206.0
11 TraesCS2B01G136700 chr1D 93.040 819 50 5 2254 3068 6450453 6449638 0.000000e+00 1190.0
12 TraesCS2B01G136700 chr1B 97.307 1894 45 4 228 2120 426445210 426447098 0.000000e+00 3210.0
13 TraesCS2B01G136700 chr1B 84.030 526 49 14 2121 2641 280704932 280705427 1.130000e-129 473.0
14 TraesCS2B01G136700 chr1B 92.576 229 17 0 1 229 629476589 629476361 2.590000e-86 329.0
15 TraesCS2B01G136700 chr2D 89.133 1003 76 14 2124 3105 560278231 560277241 0.000000e+00 1218.0
16 TraesCS2B01G136700 chr6A 94.059 707 34 5 2400 3105 420593948 420593249 0.000000e+00 1066.0
17 TraesCS2B01G136700 chr6A 94.521 146 8 0 2119 2264 595908255 595908400 3.490000e-55 226.0
18 TraesCS2B01G136700 chrUn 88.291 743 64 9 2380 3105 364517153 364516417 0.000000e+00 869.0
19 TraesCS2B01G136700 chrUn 87.072 263 25 5 2121 2378 328885268 328885010 4.390000e-74 289.0
20 TraesCS2B01G136700 chrUn 87.072 263 25 5 2121 2378 383433926 383434184 4.390000e-74 289.0
21 TraesCS2B01G136700 chr7B 93.373 332 17 2 3146 3476 68577419 68577092 1.450000e-133 486.0
22 TraesCS2B01G136700 chr7B 92.771 332 18 2 3146 3476 122664056 122664382 3.140000e-130 475.0
23 TraesCS2B01G136700 chr5B 91.541 331 22 4 3146 3476 591098641 591098317 5.290000e-123 451.0
24 TraesCS2B01G136700 chr5D 93.013 229 16 0 1 229 462798828 462799056 5.560000e-88 335.0
25 TraesCS2B01G136700 chr5D 89.520 229 16 4 1 229 388409997 388409777 2.040000e-72 283.0
26 TraesCS2B01G136700 chr3D 93.013 229 16 0 1 229 22227383 22227611 5.560000e-88 335.0
27 TraesCS2B01G136700 chr3A 88.835 206 9 5 2119 2310 699783422 699783627 1.250000e-59 241.0
28 TraesCS2B01G136700 chr4A 92.727 165 11 1 3146 3309 637330016 637329852 1.610000e-58 237.0
29 TraesCS2B01G136700 chr4A 92.073 164 12 1 3146 3309 637358659 637358821 2.700000e-56 230.0
30 TraesCS2B01G136700 chr4A 92.949 156 11 0 3146 3301 637301523 637301678 9.710000e-56 228.0
31 TraesCS2B01G136700 chr4A 92.949 156 11 0 3146 3301 637406456 637406611 9.710000e-56 228.0
32 TraesCS2B01G136700 chr4A 91.975 162 12 1 3146 3307 637584204 637584044 3.490000e-55 226.0
33 TraesCS2B01G136700 chr4A 96.721 61 2 0 3416 3476 637329844 637329784 6.140000e-18 102.0
34 TraesCS2B01G136700 chr4A 96.721 61 2 0 3416 3476 637406628 637406688 6.140000e-18 102.0
35 TraesCS2B01G136700 chr4A 96.721 61 2 0 3416 3476 637467038 637466978 6.140000e-18 102.0
36 TraesCS2B01G136700 chr4A 96.721 61 2 0 3416 3476 637584033 637583973 6.140000e-18 102.0
37 TraesCS2B01G136700 chr4A 95.082 61 3 0 3416 3476 637492927 637492987 2.860000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G136700 chr2B 103995931 103999406 3475 False 6420.0 6420 100.0000 1 3476 1 chr2B.!!$F2 3475
1 TraesCS2B01G136700 chr1A 395174278 395176171 1893 False 3352.0 3352 98.6270 228 2120 1 chr1A.!!$F1 1892
2 TraesCS2B01G136700 chr1D 314702352 314704242 1890 False 3323.0 3323 98.3630 228 2120 1 chr1D.!!$F1 1892
3 TraesCS2B01G136700 chr1D 6437744 6457956 20212 True 1252.5 1343 92.9575 2119 3068 6 chr1D.!!$R2 949
4 TraesCS2B01G136700 chr1D 122251715 122252708 993 True 1208.0 1208 88.8450 2119 3105 1 chr1D.!!$R1 986
5 TraesCS2B01G136700 chr1B 426445210 426447098 1888 False 3210.0 3210 97.3070 228 2120 1 chr1B.!!$F2 1892
6 TraesCS2B01G136700 chr2D 560277241 560278231 990 True 1218.0 1218 89.1330 2124 3105 1 chr2D.!!$R1 981
7 TraesCS2B01G136700 chr6A 420593249 420593948 699 True 1066.0 1066 94.0590 2400 3105 1 chr6A.!!$R1 705
8 TraesCS2B01G136700 chrUn 364516417 364517153 736 True 869.0 869 88.2910 2380 3105 1 chrUn.!!$R2 725

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
219 220 0.033504 CTTGCTGTGTACTCCACCGT 59.966 55.000 0.0 0.0 43.85 4.83 F
220 221 0.249699 TTGCTGTGTACTCCACCGTG 60.250 55.000 0.0 0.0 43.85 4.94 F
222 223 0.599558 GCTGTGTACTCCACCGTGTA 59.400 55.000 0.0 0.0 43.85 2.90 F
1697 1699 1.889170 GGAGGTTTTTGAGAGCTTGGG 59.111 52.381 0.0 0.0 0.00 4.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1697 1699 2.068519 GCAAAATGCACCCAGTTAAGC 58.931 47.619 0.00 0.0 44.26 3.09 R
1946 1948 5.945784 CCATCCAGGAAAAACTATGACTTCA 59.054 40.000 0.00 0.0 41.22 3.02 R
2156 3610 6.667414 TGGCAAAGGATAACCATCTACATTTT 59.333 34.615 0.00 0.0 38.94 1.82 R
3342 20515 0.032017 GGAAGAGGGGGTAGAGCTCA 60.032 60.000 17.77 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.811555 TCTCAACCTTTGATGAACAACG 57.188 40.909 0.00 0.00 39.30 4.10
25 26 2.594529 CCTTTGATGAACAACGGTCG 57.405 50.000 0.00 0.00 41.22 4.79
26 27 1.196808 CCTTTGATGAACAACGGTCGG 59.803 52.381 0.00 0.00 41.22 4.79
27 28 0.589223 TTTGATGAACAACGGTCGGC 59.411 50.000 0.00 0.00 38.29 5.54
29 30 0.321210 TGATGAACAACGGTCGGCAT 60.321 50.000 0.00 0.00 0.00 4.40
30 31 0.373716 GATGAACAACGGTCGGCATC 59.626 55.000 0.00 0.00 0.00 3.91
31 32 0.036388 ATGAACAACGGTCGGCATCT 60.036 50.000 0.00 0.00 0.00 2.90
32 33 0.669318 TGAACAACGGTCGGCATCTC 60.669 55.000 0.00 0.00 0.00 2.75
33 34 1.359459 GAACAACGGTCGGCATCTCC 61.359 60.000 0.00 0.00 0.00 3.71
42 43 4.292178 GGCATCTCCGCTCCGAGG 62.292 72.222 0.00 0.00 0.00 4.63
44 45 2.415010 CATCTCCGCTCCGAGGTG 59.585 66.667 0.00 0.00 34.77 4.00
46 47 2.122167 ATCTCCGCTCCGAGGTGTC 61.122 63.158 0.00 0.00 0.00 3.67
47 48 4.180946 CTCCGCTCCGAGGTGTCG 62.181 72.222 0.00 0.00 46.39 4.35
55 56 4.554363 CGAGGTGTCGCCGGCTAG 62.554 72.222 26.68 10.37 43.70 3.42
58 59 4.752879 GGTGTCGCCGGCTAGCAA 62.753 66.667 26.68 2.07 0.00 3.91
60 61 4.451150 TGTCGCCGGCTAGCAAGG 62.451 66.667 26.68 19.48 0.00 3.61
61 62 4.452733 GTCGCCGGCTAGCAAGGT 62.453 66.667 26.68 0.00 0.00 3.50
62 63 4.451150 TCGCCGGCTAGCAAGGTG 62.451 66.667 26.68 26.58 36.92 4.00
63 64 4.451150 CGCCGGCTAGCAAGGTGA 62.451 66.667 27.79 0.00 37.73 4.02
64 65 2.512515 GCCGGCTAGCAAGGTGAG 60.513 66.667 22.15 5.12 0.00 3.51
69 70 2.674220 GCTAGCAAGGTGAGCCCCT 61.674 63.158 10.63 0.00 35.96 4.79
70 71 1.994463 CTAGCAAGGTGAGCCCCTT 59.006 57.895 0.00 0.00 45.85 3.95
71 72 0.329596 CTAGCAAGGTGAGCCCCTTT 59.670 55.000 0.00 0.00 42.24 3.11
72 73 0.328258 TAGCAAGGTGAGCCCCTTTC 59.672 55.000 0.00 0.00 42.24 2.62
73 74 1.979155 GCAAGGTGAGCCCCTTTCC 60.979 63.158 0.00 0.00 42.24 3.13
74 75 1.770324 CAAGGTGAGCCCCTTTCCT 59.230 57.895 0.00 0.00 42.24 3.36
75 76 0.113190 CAAGGTGAGCCCCTTTCCTT 59.887 55.000 0.00 0.00 42.24 3.36
76 77 0.113190 AAGGTGAGCCCCTTTCCTTG 59.887 55.000 0.00 0.00 42.24 3.61
78 79 1.460699 GTGAGCCCCTTTCCTTGGT 59.539 57.895 0.00 0.00 0.00 3.67
80 81 1.074889 GTGAGCCCCTTTCCTTGGTTA 59.925 52.381 0.00 0.00 0.00 2.85
81 82 1.783979 TGAGCCCCTTTCCTTGGTTAA 59.216 47.619 0.00 0.00 0.00 2.01
85 86 3.077543 AGCCCCTTTCCTTGGTTAATTCT 59.922 43.478 0.00 0.00 0.00 2.40
86 87 4.293901 AGCCCCTTTCCTTGGTTAATTCTA 59.706 41.667 0.00 0.00 0.00 2.10
87 88 5.020795 GCCCCTTTCCTTGGTTAATTCTAA 58.979 41.667 0.00 0.00 0.00 2.10
88 89 5.661312 GCCCCTTTCCTTGGTTAATTCTAAT 59.339 40.000 0.00 0.00 0.00 1.73
89 90 6.837048 GCCCCTTTCCTTGGTTAATTCTAATA 59.163 38.462 0.00 0.00 0.00 0.98
91 92 7.837187 CCCCTTTCCTTGGTTAATTCTAATACA 59.163 37.037 0.00 0.00 0.00 2.29
114 115 8.372877 ACATTCCTATTATAGATCTGTCCAGG 57.627 38.462 5.18 6.55 0.00 4.45
115 116 8.180165 ACATTCCTATTATAGATCTGTCCAGGA 58.820 37.037 5.18 8.75 0.00 3.86
116 117 9.211410 CATTCCTATTATAGATCTGTCCAGGAT 57.789 37.037 5.18 0.00 30.17 3.24
117 118 9.796242 ATTCCTATTATAGATCTGTCCAGGATT 57.204 33.333 5.18 5.69 30.17 3.01
118 119 9.621239 TTCCTATTATAGATCTGTCCAGGATTT 57.379 33.333 5.18 0.00 30.17 2.17
119 120 9.621239 TCCTATTATAGATCTGTCCAGGATTTT 57.379 33.333 5.18 0.00 0.00 1.82
125 126 6.566079 AGATCTGTCCAGGATTTTATGTGA 57.434 37.500 0.00 0.00 0.00 3.58
127 128 7.580910 AGATCTGTCCAGGATTTTATGTGATT 58.419 34.615 0.00 0.00 0.00 2.57
128 129 7.501559 AGATCTGTCCAGGATTTTATGTGATTG 59.498 37.037 0.00 0.00 0.00 2.67
129 130 5.887598 TCTGTCCAGGATTTTATGTGATTGG 59.112 40.000 0.00 0.00 0.00 3.16
130 131 4.955450 TGTCCAGGATTTTATGTGATTGGG 59.045 41.667 0.00 0.00 0.00 4.12
131 132 3.960102 TCCAGGATTTTATGTGATTGGGC 59.040 43.478 0.00 0.00 0.00 5.36
134 135 5.294356 CAGGATTTTATGTGATTGGGCATG 58.706 41.667 0.00 0.00 0.00 4.06
135 136 4.060205 GGATTTTATGTGATTGGGCATGC 58.940 43.478 9.90 9.90 0.00 4.06
136 137 4.202284 GGATTTTATGTGATTGGGCATGCT 60.202 41.667 18.92 0.00 0.00 3.79
137 138 3.804786 TTTATGTGATTGGGCATGCTG 57.195 42.857 18.92 0.00 0.00 4.41
138 139 2.440517 TATGTGATTGGGCATGCTGT 57.559 45.000 18.92 0.74 0.00 4.40
139 140 1.563924 ATGTGATTGGGCATGCTGTT 58.436 45.000 18.92 0.00 0.00 3.16
140 141 0.604073 TGTGATTGGGCATGCTGTTG 59.396 50.000 18.92 0.00 0.00 3.33
141 142 0.889994 GTGATTGGGCATGCTGTTGA 59.110 50.000 18.92 0.00 0.00 3.18
143 144 1.752498 TGATTGGGCATGCTGTTGATC 59.248 47.619 18.92 13.75 0.00 2.92
144 145 2.029623 GATTGGGCATGCTGTTGATCT 58.970 47.619 18.92 0.00 0.00 2.75
145 146 2.804986 TTGGGCATGCTGTTGATCTA 57.195 45.000 18.92 0.00 0.00 1.98
147 148 2.578786 TGGGCATGCTGTTGATCTATG 58.421 47.619 18.92 0.00 0.00 2.23
148 149 2.173143 TGGGCATGCTGTTGATCTATGA 59.827 45.455 18.92 0.00 0.00 2.15
150 151 3.190744 GGGCATGCTGTTGATCTATGATG 59.809 47.826 18.92 0.00 0.00 3.07
152 153 3.252458 GCATGCTGTTGATCTATGATGCA 59.748 43.478 11.37 0.00 35.97 3.96
153 154 4.082733 GCATGCTGTTGATCTATGATGCAT 60.083 41.667 11.37 0.00 39.99 3.96
154 155 5.123344 GCATGCTGTTGATCTATGATGCATA 59.877 40.000 11.37 0.00 37.74 3.14
155 156 6.675728 GCATGCTGTTGATCTATGATGCATAG 60.676 42.308 11.37 7.89 43.52 2.23
165 166 6.581171 TCTATGATGCATAGAACGAGTGAT 57.419 37.500 13.19 0.00 46.41 3.06
167 168 7.436933 TCTATGATGCATAGAACGAGTGATTT 58.563 34.615 13.19 0.00 46.41 2.17
168 169 5.723492 TGATGCATAGAACGAGTGATTTG 57.277 39.130 0.00 0.00 0.00 2.32
170 171 4.926860 TGCATAGAACGAGTGATTTGTG 57.073 40.909 0.00 0.00 0.00 3.33
171 172 3.684305 TGCATAGAACGAGTGATTTGTGG 59.316 43.478 0.00 0.00 0.00 4.17
174 175 5.621422 CATAGAACGAGTGATTTGTGGTTG 58.379 41.667 0.00 0.00 0.00 3.77
175 176 3.804036 AGAACGAGTGATTTGTGGTTGA 58.196 40.909 0.00 0.00 0.00 3.18
176 177 3.809832 AGAACGAGTGATTTGTGGTTGAG 59.190 43.478 0.00 0.00 0.00 3.02
178 179 4.330944 ACGAGTGATTTGTGGTTGAGTA 57.669 40.909 0.00 0.00 0.00 2.59
179 180 4.307432 ACGAGTGATTTGTGGTTGAGTAG 58.693 43.478 0.00 0.00 0.00 2.57
181 182 4.386049 CGAGTGATTTGTGGTTGAGTAGTC 59.614 45.833 0.00 0.00 0.00 2.59
182 183 4.642429 AGTGATTTGTGGTTGAGTAGTCC 58.358 43.478 0.00 0.00 0.00 3.85
183 184 4.102524 AGTGATTTGTGGTTGAGTAGTCCA 59.897 41.667 0.00 0.00 0.00 4.02
184 185 5.003804 GTGATTTGTGGTTGAGTAGTCCAT 58.996 41.667 0.00 0.00 33.68 3.41
187 188 7.174253 GTGATTTGTGGTTGAGTAGTCCATTTA 59.826 37.037 0.00 0.00 33.68 1.40
188 189 7.390440 TGATTTGTGGTTGAGTAGTCCATTTAG 59.610 37.037 0.00 0.00 33.68 1.85
189 190 4.575885 TGTGGTTGAGTAGTCCATTTAGC 58.424 43.478 0.00 0.00 33.68 3.09
190 191 3.939592 GTGGTTGAGTAGTCCATTTAGCC 59.060 47.826 0.00 0.00 33.68 3.93
191 192 3.054655 TGGTTGAGTAGTCCATTTAGCCC 60.055 47.826 0.00 0.00 0.00 5.19
193 194 4.324331 GGTTGAGTAGTCCATTTAGCCCTT 60.324 45.833 0.00 0.00 0.00 3.95
194 195 5.254115 GTTGAGTAGTCCATTTAGCCCTTT 58.746 41.667 0.00 0.00 0.00 3.11
195 196 5.099042 TGAGTAGTCCATTTAGCCCTTTC 57.901 43.478 0.00 0.00 0.00 2.62
196 197 4.120589 GAGTAGTCCATTTAGCCCTTTCG 58.879 47.826 0.00 0.00 0.00 3.46
197 198 3.773119 AGTAGTCCATTTAGCCCTTTCGA 59.227 43.478 0.00 0.00 0.00 3.71
201 202 2.092429 TCCATTTAGCCCTTTCGATGCT 60.092 45.455 4.93 4.93 39.10 3.79
202 203 2.689983 CCATTTAGCCCTTTCGATGCTT 59.310 45.455 4.87 0.00 36.57 3.91
203 204 3.489738 CCATTTAGCCCTTTCGATGCTTG 60.490 47.826 4.87 0.00 36.57 4.01
204 205 1.094785 TTAGCCCTTTCGATGCTTGC 58.905 50.000 4.87 0.00 36.57 4.01
206 207 1.138247 GCCCTTTCGATGCTTGCTG 59.862 57.895 0.00 0.00 0.00 4.41
207 208 1.589716 GCCCTTTCGATGCTTGCTGT 61.590 55.000 0.00 0.00 0.00 4.40
208 209 0.169672 CCCTTTCGATGCTTGCTGTG 59.830 55.000 0.00 0.00 0.00 3.66
209 210 0.877071 CCTTTCGATGCTTGCTGTGT 59.123 50.000 0.00 0.00 0.00 3.72
210 211 2.076100 CCTTTCGATGCTTGCTGTGTA 58.924 47.619 0.00 0.00 0.00 2.90
211 212 2.159653 CCTTTCGATGCTTGCTGTGTAC 60.160 50.000 0.00 0.00 0.00 2.90
212 213 2.455674 TTCGATGCTTGCTGTGTACT 57.544 45.000 0.00 0.00 0.00 2.73
213 214 1.996292 TCGATGCTTGCTGTGTACTC 58.004 50.000 0.00 0.00 0.00 2.59
214 215 1.002366 CGATGCTTGCTGTGTACTCC 58.998 55.000 0.00 0.00 0.00 3.85
215 216 1.672737 CGATGCTTGCTGTGTACTCCA 60.673 52.381 0.00 0.00 0.00 3.86
216 217 1.734465 GATGCTTGCTGTGTACTCCAC 59.266 52.381 0.00 0.00 44.78 4.02
218 219 1.291877 GCTTGCTGTGTACTCCACCG 61.292 60.000 0.00 0.00 43.85 4.94
219 220 0.033504 CTTGCTGTGTACTCCACCGT 59.966 55.000 0.00 0.00 43.85 4.83
220 221 0.249699 TTGCTGTGTACTCCACCGTG 60.250 55.000 0.00 0.00 43.85 4.94
221 222 1.366366 GCTGTGTACTCCACCGTGT 59.634 57.895 0.00 0.00 43.85 4.49
222 223 0.599558 GCTGTGTACTCCACCGTGTA 59.400 55.000 0.00 0.00 43.85 2.90
224 225 2.734492 GCTGTGTACTCCACCGTGTATC 60.734 54.545 0.00 0.00 43.85 2.24
226 227 3.093814 TGTGTACTCCACCGTGTATCAT 58.906 45.455 0.00 0.00 43.85 2.45
481 482 8.898761 TCAACTTTCTGCAAGTAAAGAACATTA 58.101 29.630 17.91 1.24 45.77 1.90
522 523 5.508825 CCAAATTGTCATTTCCCGTCTTGAA 60.509 40.000 0.00 0.00 29.41 2.69
1060 1062 3.139077 CGTAAGGACTCTTGCCAGTTTT 58.861 45.455 0.00 0.00 32.94 2.43
1098 1100 6.613153 ACTAGGCTATTCCAACATCCTATC 57.387 41.667 0.00 0.00 37.29 2.08
1236 1238 2.000447 GAACTGTCTGCCATAACCGAC 59.000 52.381 0.00 0.00 0.00 4.79
1697 1699 1.889170 GGAGGTTTTTGAGAGCTTGGG 59.111 52.381 0.00 0.00 0.00 4.12
2102 2104 8.204160 TGTGGAAGTCCTATGAAATGTATGTAG 58.796 37.037 0.00 0.00 36.82 2.74
2156 3610 3.891977 TGCCTAATTAACAAGCAACACCA 59.108 39.130 0.00 0.00 0.00 4.17
2241 3699 6.726258 TCATGACAAAGATGTGTATGTGTC 57.274 37.500 0.00 0.00 40.74 3.67
2247 3743 3.510388 AGATGTGTATGTGTCTGGACG 57.490 47.619 0.00 0.00 0.00 4.79
2248 3744 2.826128 AGATGTGTATGTGTCTGGACGT 59.174 45.455 0.00 0.00 0.00 4.34
2249 3745 3.258372 AGATGTGTATGTGTCTGGACGTT 59.742 43.478 0.00 0.00 0.00 3.99
2250 3746 3.462483 TGTGTATGTGTCTGGACGTTT 57.538 42.857 0.00 0.00 0.00 3.60
2294 3802 8.802267 TGAATTAGGATTTAAAGTTTGGGACTG 58.198 33.333 0.00 0.00 39.00 3.51
2459 3974 3.365264 GCAGATCGACTTGCAATGTTGAA 60.365 43.478 17.42 6.84 37.85 2.69
2468 3983 4.581824 ACTTGCAATGTTGAACAGATCACT 59.418 37.500 3.74 0.00 37.92 3.41
2475 3990 7.907045 GCAATGTTGAACAGATCACTATGTTAG 59.093 37.037 3.74 0.00 39.66 2.34
2505 4020 3.748048 GCATTTAGAGAAGTGTGTGCTCA 59.252 43.478 0.00 0.00 0.00 4.26
2582 4098 5.894964 TGCACTAACAGGTATACATGAGGTA 59.105 40.000 23.38 11.12 36.16 3.08
2625 4141 8.856153 TGGTCTTGTAGTTAGCAAATCAATTA 57.144 30.769 0.00 0.00 0.00 1.40
2704 4221 1.630369 TGAGATTTGAGACCAGGGTGG 59.370 52.381 0.00 0.00 45.02 4.61
2730 4247 6.150976 ACGTCACAAATATGTCAACCATGATT 59.849 34.615 0.00 0.00 37.82 2.57
2733 4250 8.246180 GTCACAAATATGTCAACCATGATTTCT 58.754 33.333 0.00 0.00 37.82 2.52
2742 4259 0.259647 CCATGATTTCTGGAGCCCCA 59.740 55.000 0.00 0.00 40.95 4.96
2769 4286 2.512056 TCCTCTTCCTTTTGGGTGTGAA 59.488 45.455 0.00 0.00 40.87 3.18
2890 4407 7.658525 AATGTTCTGTGATGAGATAGTCTCT 57.341 36.000 8.30 0.00 43.73 3.10
3006 12357 6.110411 ACTATGGGAATTTATAGGTGGTCG 57.890 41.667 0.00 0.00 32.45 4.79
3055 20228 6.541641 AGATAAAGAACTCACATGAATCCAGC 59.458 38.462 0.00 0.00 0.00 4.85
3084 20257 7.141363 GTGCTCTGTTTTGTATTTCTCATGTT 58.859 34.615 0.00 0.00 0.00 2.71
3105 20278 2.420372 TCGAGCAGAGTCTGTGTGTATC 59.580 50.000 21.06 9.09 33.43 2.24
3106 20279 2.162408 CGAGCAGAGTCTGTGTGTATCA 59.838 50.000 21.06 0.00 33.43 2.15
3107 20280 3.366374 CGAGCAGAGTCTGTGTGTATCAA 60.366 47.826 21.06 0.00 33.43 2.57
3108 20281 4.172505 GAGCAGAGTCTGTGTGTATCAAG 58.827 47.826 21.06 0.00 33.43 3.02
3109 20282 3.829026 AGCAGAGTCTGTGTGTATCAAGA 59.171 43.478 21.06 0.00 33.43 3.02
3110 20283 4.281941 AGCAGAGTCTGTGTGTATCAAGAA 59.718 41.667 21.06 0.00 33.43 2.52
3111 20284 4.991056 GCAGAGTCTGTGTGTATCAAGAAA 59.009 41.667 21.06 0.00 33.43 2.52
3112 20285 5.641209 GCAGAGTCTGTGTGTATCAAGAAAT 59.359 40.000 21.06 0.00 33.43 2.17
3113 20286 6.813649 GCAGAGTCTGTGTGTATCAAGAAATA 59.186 38.462 21.06 0.00 33.43 1.40
3114 20287 7.331934 GCAGAGTCTGTGTGTATCAAGAAATAA 59.668 37.037 21.06 0.00 33.43 1.40
3115 20288 8.867935 CAGAGTCTGTGTGTATCAAGAAATAAG 58.132 37.037 12.28 0.00 0.00 1.73
3116 20289 8.807118 AGAGTCTGTGTGTATCAAGAAATAAGA 58.193 33.333 0.00 0.00 0.00 2.10
3117 20290 9.424319 GAGTCTGTGTGTATCAAGAAATAAGAA 57.576 33.333 0.00 0.00 0.00 2.52
3118 20291 9.950496 AGTCTGTGTGTATCAAGAAATAAGAAT 57.050 29.630 0.00 0.00 0.00 2.40
3119 20292 9.979270 GTCTGTGTGTATCAAGAAATAAGAATG 57.021 33.333 0.00 0.00 0.00 2.67
3120 20293 9.942850 TCTGTGTGTATCAAGAAATAAGAATGA 57.057 29.630 0.00 0.00 0.00 2.57
3133 20306 9.175577 AGAAATAAGAATGATAGGAGGAATCCA 57.824 33.333 0.61 0.00 0.00 3.41
3134 20307 9.447157 GAAATAAGAATGATAGGAGGAATCCAG 57.553 37.037 0.61 0.00 0.00 3.86
3135 20308 4.906747 AGAATGATAGGAGGAATCCAGC 57.093 45.455 0.61 0.00 0.00 4.85
3136 20309 3.586618 AGAATGATAGGAGGAATCCAGCC 59.413 47.826 0.61 2.22 0.00 4.85
3137 20310 2.803285 TGATAGGAGGAATCCAGCCT 57.197 50.000 16.19 16.19 38.81 4.58
3143 20316 2.928002 AGGAATCCAGCCTCCTCAG 58.072 57.895 0.61 0.00 37.53 3.35
3144 20317 0.341258 AGGAATCCAGCCTCCTCAGA 59.659 55.000 0.61 0.00 37.53 3.27
3145 20318 0.467804 GGAATCCAGCCTCCTCAGAC 59.532 60.000 0.00 0.00 0.00 3.51
3146 20319 1.198713 GAATCCAGCCTCCTCAGACA 58.801 55.000 0.00 0.00 0.00 3.41
3147 20320 1.556911 GAATCCAGCCTCCTCAGACAA 59.443 52.381 0.00 0.00 0.00 3.18
3148 20321 0.908198 ATCCAGCCTCCTCAGACAAC 59.092 55.000 0.00 0.00 0.00 3.32
3149 20322 0.178921 TCCAGCCTCCTCAGACAACT 60.179 55.000 0.00 0.00 0.00 3.16
3150 20323 1.077169 TCCAGCCTCCTCAGACAACTA 59.923 52.381 0.00 0.00 0.00 2.24
3151 20324 2.114616 CCAGCCTCCTCAGACAACTAT 58.885 52.381 0.00 0.00 0.00 2.12
3152 20325 2.158986 CCAGCCTCCTCAGACAACTATG 60.159 54.545 0.00 0.00 0.00 2.23
3153 20326 2.114616 AGCCTCCTCAGACAACTATGG 58.885 52.381 0.00 0.00 0.00 2.74
3154 20327 1.834263 GCCTCCTCAGACAACTATGGT 59.166 52.381 0.00 0.00 0.00 3.55
3155 20328 2.419297 GCCTCCTCAGACAACTATGGTG 60.419 54.545 0.00 0.00 0.00 4.17
3156 20329 2.419297 CCTCCTCAGACAACTATGGTGC 60.419 54.545 0.00 0.00 0.00 5.01
3157 20330 1.204704 TCCTCAGACAACTATGGTGCG 59.795 52.381 0.00 0.00 0.00 5.34
3158 20331 1.066858 CCTCAGACAACTATGGTGCGT 60.067 52.381 0.00 0.00 0.00 5.24
3159 20332 1.995484 CTCAGACAACTATGGTGCGTG 59.005 52.381 0.00 0.00 0.00 5.34
3160 20333 0.443869 CAGACAACTATGGTGCGTGC 59.556 55.000 0.00 0.00 0.00 5.34
3161 20334 0.034756 AGACAACTATGGTGCGTGCA 59.965 50.000 0.00 0.00 0.00 4.57
3162 20335 0.165944 GACAACTATGGTGCGTGCAC 59.834 55.000 16.40 16.40 45.49 4.57
3170 20343 2.793946 GTGCGTGCACATGATCCC 59.206 61.111 19.45 0.00 45.53 3.85
3171 20344 1.746615 GTGCGTGCACATGATCCCT 60.747 57.895 19.45 0.00 45.53 4.20
3172 20345 1.746239 TGCGTGCACATGATCCCTG 60.746 57.895 18.64 0.00 0.00 4.45
3173 20346 1.450134 GCGTGCACATGATCCCTGA 60.450 57.895 18.64 0.00 0.00 3.86
3174 20347 1.026182 GCGTGCACATGATCCCTGAA 61.026 55.000 18.64 0.00 0.00 3.02
3175 20348 0.729116 CGTGCACATGATCCCTGAAC 59.271 55.000 18.64 0.00 0.00 3.18
3176 20349 1.098050 GTGCACATGATCCCTGAACC 58.902 55.000 13.17 0.00 0.00 3.62
3177 20350 0.034186 TGCACATGATCCCTGAACCC 60.034 55.000 0.00 0.00 0.00 4.11
3178 20351 0.753111 GCACATGATCCCTGAACCCC 60.753 60.000 0.00 0.00 0.00 4.95
3179 20352 0.921896 CACATGATCCCTGAACCCCT 59.078 55.000 0.00 0.00 0.00 4.79
3180 20353 1.285962 CACATGATCCCTGAACCCCTT 59.714 52.381 0.00 0.00 0.00 3.95
3181 20354 1.285962 ACATGATCCCTGAACCCCTTG 59.714 52.381 0.00 0.00 0.00 3.61
3182 20355 1.285962 CATGATCCCTGAACCCCTTGT 59.714 52.381 0.00 0.00 0.00 3.16
3183 20356 0.991920 TGATCCCTGAACCCCTTGTC 59.008 55.000 0.00 0.00 0.00 3.18
3184 20357 1.290134 GATCCCTGAACCCCTTGTCT 58.710 55.000 0.00 0.00 0.00 3.41
3185 20358 1.636003 GATCCCTGAACCCCTTGTCTT 59.364 52.381 0.00 0.00 0.00 3.01
3186 20359 0.771127 TCCCTGAACCCCTTGTCTTG 59.229 55.000 0.00 0.00 0.00 3.02
3187 20360 0.895559 CCCTGAACCCCTTGTCTTGC 60.896 60.000 0.00 0.00 0.00 4.01
3188 20361 0.895559 CCTGAACCCCTTGTCTTGCC 60.896 60.000 0.00 0.00 0.00 4.52
3189 20362 1.228124 TGAACCCCTTGTCTTGCCG 60.228 57.895 0.00 0.00 0.00 5.69
3190 20363 1.971695 GAACCCCTTGTCTTGCCGG 60.972 63.158 0.00 0.00 0.00 6.13
3191 20364 2.692273 GAACCCCTTGTCTTGCCGGT 62.692 60.000 1.90 0.00 0.00 5.28
3192 20365 2.115266 CCCCTTGTCTTGCCGGTT 59.885 61.111 1.90 0.00 0.00 4.44
3193 20366 1.530655 CCCCTTGTCTTGCCGGTTT 60.531 57.895 1.90 0.00 0.00 3.27
3194 20367 1.524008 CCCCTTGTCTTGCCGGTTTC 61.524 60.000 1.90 0.00 0.00 2.78
3195 20368 0.537371 CCCTTGTCTTGCCGGTTTCT 60.537 55.000 1.90 0.00 0.00 2.52
3196 20369 1.318576 CCTTGTCTTGCCGGTTTCTT 58.681 50.000 1.90 0.00 0.00 2.52
3197 20370 1.266989 CCTTGTCTTGCCGGTTTCTTC 59.733 52.381 1.90 0.00 0.00 2.87
3198 20371 1.946768 CTTGTCTTGCCGGTTTCTTCA 59.053 47.619 1.90 0.00 0.00 3.02
3199 20372 2.270352 TGTCTTGCCGGTTTCTTCAT 57.730 45.000 1.90 0.00 0.00 2.57
3200 20373 2.151202 TGTCTTGCCGGTTTCTTCATC 58.849 47.619 1.90 0.00 0.00 2.92
3201 20374 2.224523 TGTCTTGCCGGTTTCTTCATCT 60.225 45.455 1.90 0.00 0.00 2.90
3202 20375 2.416893 GTCTTGCCGGTTTCTTCATCTC 59.583 50.000 1.90 0.00 0.00 2.75
3203 20376 1.740025 CTTGCCGGTTTCTTCATCTCC 59.260 52.381 1.90 0.00 0.00 3.71
3204 20377 0.035439 TGCCGGTTTCTTCATCTCCC 60.035 55.000 1.90 0.00 0.00 4.30
3205 20378 0.748367 GCCGGTTTCTTCATCTCCCC 60.748 60.000 1.90 0.00 0.00 4.81
3206 20379 0.912486 CCGGTTTCTTCATCTCCCCT 59.088 55.000 0.00 0.00 0.00 4.79
3207 20380 1.134371 CCGGTTTCTTCATCTCCCCTC 60.134 57.143 0.00 0.00 0.00 4.30
3208 20381 1.134371 CGGTTTCTTCATCTCCCCTCC 60.134 57.143 0.00 0.00 0.00 4.30
3209 20382 2.200955 GGTTTCTTCATCTCCCCTCCT 58.799 52.381 0.00 0.00 0.00 3.69
3210 20383 2.578480 GGTTTCTTCATCTCCCCTCCTT 59.422 50.000 0.00 0.00 0.00 3.36
3211 20384 3.615155 GTTTCTTCATCTCCCCTCCTTG 58.385 50.000 0.00 0.00 0.00 3.61
3212 20385 2.649742 TCTTCATCTCCCCTCCTTGT 57.350 50.000 0.00 0.00 0.00 3.16
3213 20386 2.191400 TCTTCATCTCCCCTCCTTGTG 58.809 52.381 0.00 0.00 0.00 3.33
3214 20387 2.191400 CTTCATCTCCCCTCCTTGTGA 58.809 52.381 0.00 0.00 0.00 3.58
3215 20388 2.575921 TCATCTCCCCTCCTTGTGAT 57.424 50.000 0.00 0.00 0.00 3.06
3216 20389 2.850833 TCATCTCCCCTCCTTGTGATT 58.149 47.619 0.00 0.00 0.00 2.57
3217 20390 2.774234 TCATCTCCCCTCCTTGTGATTC 59.226 50.000 0.00 0.00 0.00 2.52
3218 20391 2.342406 TCTCCCCTCCTTGTGATTCA 57.658 50.000 0.00 0.00 0.00 2.57
3219 20392 2.850833 TCTCCCCTCCTTGTGATTCAT 58.149 47.619 0.00 0.00 0.00 2.57
3220 20393 3.192944 TCTCCCCTCCTTGTGATTCATT 58.807 45.455 0.00 0.00 0.00 2.57
3221 20394 4.370776 TCTCCCCTCCTTGTGATTCATTA 58.629 43.478 0.00 0.00 0.00 1.90
3222 20395 4.410228 TCTCCCCTCCTTGTGATTCATTAG 59.590 45.833 0.00 0.00 0.00 1.73
3223 20396 4.111577 TCCCCTCCTTGTGATTCATTAGT 58.888 43.478 0.00 0.00 0.00 2.24
3224 20397 4.540099 TCCCCTCCTTGTGATTCATTAGTT 59.460 41.667 0.00 0.00 0.00 2.24
3225 20398 5.015178 TCCCCTCCTTGTGATTCATTAGTTT 59.985 40.000 0.00 0.00 0.00 2.66
3226 20399 5.126061 CCCCTCCTTGTGATTCATTAGTTTG 59.874 44.000 0.00 0.00 0.00 2.93
3227 20400 5.711976 CCCTCCTTGTGATTCATTAGTTTGT 59.288 40.000 0.00 0.00 0.00 2.83
3228 20401 6.209391 CCCTCCTTGTGATTCATTAGTTTGTT 59.791 38.462 0.00 0.00 0.00 2.83
3229 20402 7.255942 CCCTCCTTGTGATTCATTAGTTTGTTT 60.256 37.037 0.00 0.00 0.00 2.83
3230 20403 8.143835 CCTCCTTGTGATTCATTAGTTTGTTTT 58.856 33.333 0.00 0.00 0.00 2.43
3231 20404 8.870160 TCCTTGTGATTCATTAGTTTGTTTTG 57.130 30.769 0.00 0.00 0.00 2.44
3232 20405 8.474025 TCCTTGTGATTCATTAGTTTGTTTTGT 58.526 29.630 0.00 0.00 0.00 2.83
3233 20406 8.542132 CCTTGTGATTCATTAGTTTGTTTTGTG 58.458 33.333 0.00 0.00 0.00 3.33
3234 20407 8.994429 TTGTGATTCATTAGTTTGTTTTGTGT 57.006 26.923 0.00 0.00 0.00 3.72
3235 20408 8.404889 TGTGATTCATTAGTTTGTTTTGTGTG 57.595 30.769 0.00 0.00 0.00 3.82
3236 20409 7.009999 TGTGATTCATTAGTTTGTTTTGTGTGC 59.990 33.333 0.00 0.00 0.00 4.57
3237 20410 7.009999 GTGATTCATTAGTTTGTTTTGTGTGCA 59.990 33.333 0.00 0.00 0.00 4.57
3238 20411 6.884096 TTCATTAGTTTGTTTTGTGTGCAG 57.116 33.333 0.00 0.00 0.00 4.41
3239 20412 5.960113 TCATTAGTTTGTTTTGTGTGCAGT 58.040 33.333 0.00 0.00 0.00 4.40
3240 20413 6.393990 TCATTAGTTTGTTTTGTGTGCAGTT 58.606 32.000 0.00 0.00 0.00 3.16
3241 20414 6.309980 TCATTAGTTTGTTTTGTGTGCAGTTG 59.690 34.615 0.00 0.00 0.00 3.16
3242 20415 2.736192 AGTTTGTTTTGTGTGCAGTTGC 59.264 40.909 0.00 0.00 42.50 4.17
3243 20416 2.736192 GTTTGTTTTGTGTGCAGTTGCT 59.264 40.909 5.62 0.00 42.66 3.91
3244 20417 2.276472 TGTTTTGTGTGCAGTTGCTC 57.724 45.000 5.62 2.44 42.66 4.26
3245 20418 1.135141 TGTTTTGTGTGCAGTTGCTCC 60.135 47.619 5.62 0.00 42.66 4.70
3246 20419 0.100325 TTTTGTGTGCAGTTGCTCCG 59.900 50.000 5.62 0.00 42.66 4.63
3247 20420 0.746204 TTTGTGTGCAGTTGCTCCGA 60.746 50.000 5.62 0.00 42.66 4.55
3248 20421 0.534877 TTGTGTGCAGTTGCTCCGAT 60.535 50.000 5.62 0.00 42.66 4.18
3249 20422 0.950555 TGTGTGCAGTTGCTCCGATC 60.951 55.000 5.62 0.00 42.66 3.69
3250 20423 0.671781 GTGTGCAGTTGCTCCGATCT 60.672 55.000 5.62 0.00 42.66 2.75
3251 20424 0.671472 TGTGCAGTTGCTCCGATCTG 60.671 55.000 5.62 0.00 42.66 2.90
3252 20425 1.078918 TGCAGTTGCTCCGATCTGG 60.079 57.895 5.62 0.00 42.66 3.86
3253 20426 1.543944 TGCAGTTGCTCCGATCTGGA 61.544 55.000 5.62 6.21 46.53 3.86
3266 20439 2.452116 TCTGGAAGAGGTGGTGGTG 58.548 57.895 0.00 0.00 38.67 4.17
3267 20440 1.302832 CTGGAAGAGGTGGTGGTGC 60.303 63.158 0.00 0.00 34.07 5.01
3268 20441 1.770110 TGGAAGAGGTGGTGGTGCT 60.770 57.895 0.00 0.00 0.00 4.40
3269 20442 0.472925 TGGAAGAGGTGGTGGTGCTA 60.473 55.000 0.00 0.00 0.00 3.49
3270 20443 0.912486 GGAAGAGGTGGTGGTGCTAT 59.088 55.000 0.00 0.00 0.00 2.97
3271 20444 1.282157 GGAAGAGGTGGTGGTGCTATT 59.718 52.381 0.00 0.00 0.00 1.73
3272 20445 2.359900 GAAGAGGTGGTGGTGCTATTG 58.640 52.381 0.00 0.00 0.00 1.90
3273 20446 1.362224 AGAGGTGGTGGTGCTATTGT 58.638 50.000 0.00 0.00 0.00 2.71
3274 20447 1.705186 AGAGGTGGTGGTGCTATTGTT 59.295 47.619 0.00 0.00 0.00 2.83
3275 20448 1.812571 GAGGTGGTGGTGCTATTGTTG 59.187 52.381 0.00 0.00 0.00 3.33
3276 20449 1.144913 AGGTGGTGGTGCTATTGTTGT 59.855 47.619 0.00 0.00 0.00 3.32
3277 20450 1.960689 GGTGGTGGTGCTATTGTTGTT 59.039 47.619 0.00 0.00 0.00 2.83
3278 20451 2.288152 GGTGGTGGTGCTATTGTTGTTG 60.288 50.000 0.00 0.00 0.00 3.33
3279 20452 1.339610 TGGTGGTGCTATTGTTGTTGC 59.660 47.619 0.00 0.00 0.00 4.17
3280 20453 1.613437 GGTGGTGCTATTGTTGTTGCT 59.387 47.619 0.00 0.00 0.00 3.91
3281 20454 2.607771 GGTGGTGCTATTGTTGTTGCTG 60.608 50.000 0.00 0.00 0.00 4.41
3282 20455 1.000385 TGGTGCTATTGTTGTTGCTGC 60.000 47.619 0.00 0.00 0.00 5.25
3283 20456 1.270550 GGTGCTATTGTTGTTGCTGCT 59.729 47.619 0.00 0.00 0.00 4.24
3284 20457 2.322161 GTGCTATTGTTGTTGCTGCTG 58.678 47.619 0.00 0.00 0.00 4.41
3285 20458 1.336148 TGCTATTGTTGTTGCTGCTGC 60.336 47.619 8.89 8.89 40.20 5.25
3294 20467 4.994471 TGCTGCTGCAGGTGGACG 62.994 66.667 29.05 5.12 45.31 4.79
3295 20468 4.687215 GCTGCTGCAGGTGGACGA 62.687 66.667 29.05 0.00 39.41 4.20
3296 20469 2.433838 CTGCTGCAGGTGGACGAG 60.434 66.667 21.71 0.00 0.00 4.18
3297 20470 3.947132 CTGCTGCAGGTGGACGAGG 62.947 68.421 21.71 0.00 0.00 4.63
3299 20472 4.007644 CTGCAGGTGGACGAGGCA 62.008 66.667 5.57 0.00 0.00 4.75
3300 20473 4.314440 TGCAGGTGGACGAGGCAC 62.314 66.667 0.00 0.00 0.00 5.01
3302 20475 3.680786 CAGGTGGACGAGGCACGA 61.681 66.667 12.15 0.00 45.77 4.35
3303 20476 3.374402 AGGTGGACGAGGCACGAG 61.374 66.667 12.15 0.00 45.77 4.18
3321 20494 2.040043 CCCTCATGGCTCCTCCCT 60.040 66.667 0.00 0.00 0.00 4.20
3322 20495 2.146061 CCCTCATGGCTCCTCCCTC 61.146 68.421 0.00 0.00 0.00 4.30
3323 20496 2.146061 CCTCATGGCTCCTCCCTCC 61.146 68.421 0.00 0.00 0.00 4.30
3324 20497 1.074623 CTCATGGCTCCTCCCTCCT 60.075 63.158 0.00 0.00 0.00 3.69
3325 20498 1.074926 TCATGGCTCCTCCCTCCTC 60.075 63.158 0.00 0.00 0.00 3.71
3326 20499 2.146061 CATGGCTCCTCCCTCCTCC 61.146 68.421 0.00 0.00 0.00 4.30
3327 20500 2.340025 ATGGCTCCTCCCTCCTCCT 61.340 63.158 0.00 0.00 0.00 3.69
3328 20501 2.123033 GGCTCCTCCCTCCTCCTC 60.123 72.222 0.00 0.00 0.00 3.71
3329 20502 2.123033 GCTCCTCCCTCCTCCTCC 60.123 72.222 0.00 0.00 0.00 4.30
3330 20503 2.612251 CTCCTCCCTCCTCCTCCC 59.388 72.222 0.00 0.00 0.00 4.30
3331 20504 3.036959 TCCTCCCTCCTCCTCCCC 61.037 72.222 0.00 0.00 0.00 4.81
3332 20505 4.179599 CCTCCCTCCTCCTCCCCC 62.180 77.778 0.00 0.00 0.00 5.40
3348 20521 4.803426 CCCTGACGCGGTGAGCTC 62.803 72.222 12.47 6.82 45.59 4.09
3349 20522 3.753434 CCTGACGCGGTGAGCTCT 61.753 66.667 16.19 0.00 45.59 4.09
3350 20523 2.407428 CCTGACGCGGTGAGCTCTA 61.407 63.158 16.19 0.00 45.59 2.43
3351 20524 1.226435 CTGACGCGGTGAGCTCTAC 60.226 63.158 16.19 11.15 45.59 2.59
3352 20525 2.102553 GACGCGGTGAGCTCTACC 59.897 66.667 16.19 18.27 45.59 3.18
3353 20526 3.412879 GACGCGGTGAGCTCTACCC 62.413 68.421 22.03 15.33 45.59 3.69
3354 20527 4.208686 CGCGGTGAGCTCTACCCC 62.209 72.222 22.03 15.64 45.59 4.95
3355 20528 3.851128 GCGGTGAGCTCTACCCCC 61.851 72.222 22.03 13.58 44.04 5.40
3356 20529 2.042843 CGGTGAGCTCTACCCCCT 60.043 66.667 22.03 0.00 34.66 4.79
3357 20530 2.128507 CGGTGAGCTCTACCCCCTC 61.129 68.421 22.03 5.20 34.66 4.30
3358 20531 1.311747 GGTGAGCTCTACCCCCTCT 59.688 63.158 16.19 0.00 31.89 3.69
3359 20532 0.325765 GGTGAGCTCTACCCCCTCTT 60.326 60.000 16.19 0.00 31.89 2.85
3360 20533 1.116308 GTGAGCTCTACCCCCTCTTC 58.884 60.000 16.19 0.00 0.00 2.87
3361 20534 0.032017 TGAGCTCTACCCCCTCTTCC 60.032 60.000 16.19 0.00 0.00 3.46
3362 20535 0.263468 GAGCTCTACCCCCTCTTCCT 59.737 60.000 6.43 0.00 0.00 3.36
3363 20536 1.499870 GAGCTCTACCCCCTCTTCCTA 59.500 57.143 6.43 0.00 0.00 2.94
3364 20537 1.218450 AGCTCTACCCCCTCTTCCTAC 59.782 57.143 0.00 0.00 0.00 3.18
3365 20538 1.758482 GCTCTACCCCCTCTTCCTACC 60.758 61.905 0.00 0.00 0.00 3.18
3366 20539 0.939698 TCTACCCCCTCTTCCTACCC 59.060 60.000 0.00 0.00 0.00 3.69
3367 20540 0.105090 CTACCCCCTCTTCCTACCCC 60.105 65.000 0.00 0.00 0.00 4.95
3368 20541 1.606514 TACCCCCTCTTCCTACCCCC 61.607 65.000 0.00 0.00 0.00 5.40
3390 20563 4.213564 CCCCCTGCACATCTATCTTATC 57.786 50.000 0.00 0.00 0.00 1.75
3391 20564 3.843027 CCCCCTGCACATCTATCTTATCT 59.157 47.826 0.00 0.00 0.00 1.98
3392 20565 5.026121 CCCCCTGCACATCTATCTTATCTA 58.974 45.833 0.00 0.00 0.00 1.98
3393 20566 5.128499 CCCCCTGCACATCTATCTTATCTAG 59.872 48.000 0.00 0.00 0.00 2.43
3394 20567 5.954752 CCCCTGCACATCTATCTTATCTAGA 59.045 44.000 0.00 0.00 37.28 2.43
3395 20568 6.610830 CCCCTGCACATCTATCTTATCTAGAT 59.389 42.308 10.73 10.73 45.59 1.98
3396 20569 7.782168 CCCCTGCACATCTATCTTATCTAGATA 59.218 40.741 8.44 8.44 41.89 1.98
3397 20570 9.194972 CCCTGCACATCTATCTTATCTAGATAA 57.805 37.037 21.24 21.24 43.54 1.75
3414 20587 9.976511 ATCTAGATAATTTGATTGCAATTGTGG 57.023 29.630 14.33 0.00 33.25 4.17
3415 20588 8.970020 TCTAGATAATTTGATTGCAATTGTGGT 58.030 29.630 14.33 2.46 33.25 4.16
3416 20589 9.590451 CTAGATAATTTGATTGCAATTGTGGTT 57.410 29.630 14.33 8.07 33.25 3.67
3417 20590 8.483307 AGATAATTTGATTGCAATTGTGGTTC 57.517 30.769 14.33 0.00 33.25 3.62
3418 20591 8.316214 AGATAATTTGATTGCAATTGTGGTTCT 58.684 29.630 14.33 8.30 33.25 3.01
3419 20592 6.548441 AATTTGATTGCAATTGTGGTTCTG 57.452 33.333 14.33 0.00 33.25 3.02
3420 20593 3.663995 TGATTGCAATTGTGGTTCTGG 57.336 42.857 14.33 0.00 0.00 3.86
3421 20594 3.229293 TGATTGCAATTGTGGTTCTGGA 58.771 40.909 14.33 0.00 0.00 3.86
3422 20595 3.005684 TGATTGCAATTGTGGTTCTGGAC 59.994 43.478 14.33 0.00 0.00 4.02
3423 20596 2.064434 TGCAATTGTGGTTCTGGACA 57.936 45.000 7.40 0.00 0.00 4.02
3424 20597 1.680735 TGCAATTGTGGTTCTGGACAC 59.319 47.619 7.40 0.00 38.08 3.67
3425 20598 1.334960 GCAATTGTGGTTCTGGACACG 60.335 52.381 7.40 0.00 40.39 4.49
3426 20599 2.217750 CAATTGTGGTTCTGGACACGA 58.782 47.619 0.00 0.00 40.39 4.35
3427 20600 1.878953 ATTGTGGTTCTGGACACGAC 58.121 50.000 0.00 0.00 40.39 4.34
3428 20601 0.179067 TTGTGGTTCTGGACACGACC 60.179 55.000 0.00 0.00 40.39 4.79
3429 20602 1.046472 TGTGGTTCTGGACACGACCT 61.046 55.000 0.00 0.00 40.39 3.85
3430 20603 0.600255 GTGGTTCTGGACACGACCTG 60.600 60.000 0.00 0.00 33.33 4.00
3431 20604 1.004918 GGTTCTGGACACGACCTGG 60.005 63.158 0.00 0.00 0.00 4.45
3432 20605 1.746517 GTTCTGGACACGACCTGGT 59.253 57.895 0.00 0.00 0.00 4.00
3433 20606 0.600255 GTTCTGGACACGACCTGGTG 60.600 60.000 2.82 0.00 43.54 4.17
3434 20607 1.754380 TTCTGGACACGACCTGGTGG 61.754 60.000 2.82 5.46 42.23 4.61
3446 20619 3.456380 ACCTGGTGGTGATTGCTAATT 57.544 42.857 0.00 0.00 46.51 1.40
3447 20620 3.778265 ACCTGGTGGTGATTGCTAATTT 58.222 40.909 0.00 0.00 46.51 1.82
3448 20621 3.763897 ACCTGGTGGTGATTGCTAATTTC 59.236 43.478 0.00 0.00 46.51 2.17
3449 20622 3.763360 CCTGGTGGTGATTGCTAATTTCA 59.237 43.478 0.00 0.00 0.00 2.69
3450 20623 4.142315 CCTGGTGGTGATTGCTAATTTCAG 60.142 45.833 0.00 0.00 0.00 3.02
3451 20624 4.406456 TGGTGGTGATTGCTAATTTCAGT 58.594 39.130 0.00 0.00 0.00 3.41
3452 20625 4.218200 TGGTGGTGATTGCTAATTTCAGTG 59.782 41.667 0.00 0.00 0.00 3.66
3453 20626 4.218417 GGTGGTGATTGCTAATTTCAGTGT 59.782 41.667 0.00 0.00 0.00 3.55
3454 20627 5.278957 GGTGGTGATTGCTAATTTCAGTGTT 60.279 40.000 0.00 0.00 0.00 3.32
3455 20628 6.072175 GGTGGTGATTGCTAATTTCAGTGTTA 60.072 38.462 0.00 0.00 0.00 2.41
3456 20629 7.367285 GTGGTGATTGCTAATTTCAGTGTTAA 58.633 34.615 0.00 0.00 0.00 2.01
3457 20630 7.865385 GTGGTGATTGCTAATTTCAGTGTTAAA 59.135 33.333 0.00 0.00 0.00 1.52
3458 20631 8.417106 TGGTGATTGCTAATTTCAGTGTTAAAA 58.583 29.630 0.00 0.00 0.00 1.52
3459 20632 9.255304 GGTGATTGCTAATTTCAGTGTTAAAAA 57.745 29.630 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.563808 CCGTTGTTCATCAAAGGTTGAGA 59.436 43.478 4.81 0.00 45.84 3.27
1 2 3.888934 CCGTTGTTCATCAAAGGTTGAG 58.111 45.455 4.81 0.00 45.84 3.02
2 3 3.980646 CCGTTGTTCATCAAAGGTTGA 57.019 42.857 4.81 0.00 45.84 3.18
7 8 1.399727 GCCGACCGTTGTTCATCAAAG 60.400 52.381 0.00 0.00 37.81 2.77
8 9 0.589223 GCCGACCGTTGTTCATCAAA 59.411 50.000 0.00 0.00 37.81 2.69
10 11 0.321210 ATGCCGACCGTTGTTCATCA 60.321 50.000 0.00 0.00 0.00 3.07
11 12 0.373716 GATGCCGACCGTTGTTCATC 59.626 55.000 0.00 3.75 0.00 2.92
12 13 0.036388 AGATGCCGACCGTTGTTCAT 60.036 50.000 0.00 0.00 0.00 2.57
13 14 0.669318 GAGATGCCGACCGTTGTTCA 60.669 55.000 0.00 0.00 0.00 3.18
14 15 1.359459 GGAGATGCCGACCGTTGTTC 61.359 60.000 0.00 0.00 0.00 3.18
15 16 1.375523 GGAGATGCCGACCGTTGTT 60.376 57.895 0.00 0.00 0.00 2.83
16 17 2.264794 GGAGATGCCGACCGTTGT 59.735 61.111 0.00 0.00 0.00 3.32
25 26 4.292178 CCTCGGAGCGGAGATGCC 62.292 72.222 0.00 0.00 31.34 4.40
26 27 3.532155 ACCTCGGAGCGGAGATGC 61.532 66.667 0.00 0.00 34.93 3.91
27 28 2.343163 GACACCTCGGAGCGGAGATG 62.343 65.000 0.00 2.60 34.93 2.90
29 30 2.750637 GACACCTCGGAGCGGAGA 60.751 66.667 0.00 0.00 34.93 3.71
30 31 4.180946 CGACACCTCGGAGCGGAG 62.181 72.222 0.00 0.00 34.93 4.63
38 39 4.554363 CTAGCCGGCGACACCTCG 62.554 72.222 23.20 0.00 43.28 4.63
39 40 4.874977 GCTAGCCGGCGACACCTC 62.875 72.222 23.20 3.38 35.61 3.85
41 42 4.752879 TTGCTAGCCGGCGACACC 62.753 66.667 23.20 9.69 34.52 4.16
42 43 3.188786 CTTGCTAGCCGGCGACAC 61.189 66.667 23.20 12.87 34.52 3.67
44 45 4.452733 ACCTTGCTAGCCGGCGAC 62.453 66.667 23.20 15.25 34.52 5.19
46 47 4.451150 TCACCTTGCTAGCCGGCG 62.451 66.667 23.20 9.22 34.52 6.46
47 48 2.512515 CTCACCTTGCTAGCCGGC 60.513 66.667 21.89 21.89 0.00 6.13
48 49 2.512515 GCTCACCTTGCTAGCCGG 60.513 66.667 13.29 15.06 0.00 6.13
49 50 2.512515 GGCTCACCTTGCTAGCCG 60.513 66.667 13.29 2.98 45.82 5.52
51 52 2.124529 GGGGCTCACCTTGCTAGC 60.125 66.667 8.10 8.10 40.03 3.42
52 53 3.732938 AGGGGCTCACCTTGCTAG 58.267 61.111 0.00 0.00 37.69 3.42
58 59 1.770324 CAAGGAAAGGGGCTCACCT 59.230 57.895 0.00 0.00 44.56 4.00
60 61 0.178961 AACCAAGGAAAGGGGCTCAC 60.179 55.000 0.00 0.00 0.00 3.51
61 62 1.451449 TAACCAAGGAAAGGGGCTCA 58.549 50.000 0.00 0.00 0.00 4.26
62 63 2.597578 TTAACCAAGGAAAGGGGCTC 57.402 50.000 0.00 0.00 0.00 4.70
63 64 3.077543 AGAATTAACCAAGGAAAGGGGCT 59.922 43.478 0.00 0.00 0.00 5.19
64 65 3.441101 AGAATTAACCAAGGAAAGGGGC 58.559 45.455 0.00 0.00 0.00 5.80
66 67 8.817092 TGTATTAGAATTAACCAAGGAAAGGG 57.183 34.615 0.00 0.00 0.00 3.95
88 89 9.480861 CCTGGACAGATCTATAATAGGAATGTA 57.519 37.037 0.00 0.00 0.00 2.29
89 90 8.180165 TCCTGGACAGATCTATAATAGGAATGT 58.820 37.037 10.68 0.00 0.00 2.71
91 92 9.796242 AATCCTGGACAGATCTATAATAGGAAT 57.204 33.333 14.88 7.56 35.64 3.01
93 94 9.621239 AAAATCCTGGACAGATCTATAATAGGA 57.379 33.333 13.84 13.84 36.37 2.94
99 100 9.379770 TCACATAAAATCCTGGACAGATCTATA 57.620 33.333 0.00 0.00 0.00 1.31
103 104 7.255381 CCAATCACATAAAATCCTGGACAGATC 60.255 40.741 0.00 0.00 0.00 2.75
105 106 5.887598 CCAATCACATAAAATCCTGGACAGA 59.112 40.000 0.00 0.00 0.00 3.41
106 107 5.068198 CCCAATCACATAAAATCCTGGACAG 59.932 44.000 0.00 0.00 0.00 3.51
110 111 3.705579 TGCCCAATCACATAAAATCCTGG 59.294 43.478 0.00 0.00 0.00 4.45
111 112 5.294356 CATGCCCAATCACATAAAATCCTG 58.706 41.667 0.00 0.00 0.00 3.86
112 113 4.202284 GCATGCCCAATCACATAAAATCCT 60.202 41.667 6.36 0.00 0.00 3.24
113 114 4.060205 GCATGCCCAATCACATAAAATCC 58.940 43.478 6.36 0.00 0.00 3.01
114 115 4.748102 CAGCATGCCCAATCACATAAAATC 59.252 41.667 15.66 0.00 0.00 2.17
115 116 4.162698 ACAGCATGCCCAATCACATAAAAT 59.837 37.500 15.66 0.00 42.53 1.82
116 117 3.514706 ACAGCATGCCCAATCACATAAAA 59.485 39.130 15.66 0.00 42.53 1.52
117 118 3.098377 ACAGCATGCCCAATCACATAAA 58.902 40.909 15.66 0.00 42.53 1.40
118 119 2.737544 ACAGCATGCCCAATCACATAA 58.262 42.857 15.66 0.00 42.53 1.90
119 120 2.427812 CAACAGCATGCCCAATCACATA 59.572 45.455 15.66 0.00 42.53 2.29
120 121 1.206132 CAACAGCATGCCCAATCACAT 59.794 47.619 15.66 0.00 42.53 3.21
121 122 0.604073 CAACAGCATGCCCAATCACA 59.396 50.000 15.66 0.00 42.53 3.58
122 123 0.889994 TCAACAGCATGCCCAATCAC 59.110 50.000 15.66 0.00 42.53 3.06
123 124 1.752498 GATCAACAGCATGCCCAATCA 59.248 47.619 15.66 0.00 42.53 2.57
124 125 2.029623 AGATCAACAGCATGCCCAATC 58.970 47.619 15.66 10.61 42.53 2.67
125 126 2.154567 AGATCAACAGCATGCCCAAT 57.845 45.000 15.66 0.92 42.53 3.16
127 128 2.173143 TCATAGATCAACAGCATGCCCA 59.827 45.455 15.66 0.00 42.53 5.36
128 129 2.854963 TCATAGATCAACAGCATGCCC 58.145 47.619 15.66 0.00 42.53 5.36
129 130 3.366070 GCATCATAGATCAACAGCATGCC 60.366 47.826 15.66 0.00 42.53 4.40
130 131 3.252458 TGCATCATAGATCAACAGCATGC 59.748 43.478 10.51 10.51 42.53 4.06
131 132 5.629079 ATGCATCATAGATCAACAGCATG 57.371 39.130 0.00 0.00 39.69 4.06
143 144 7.170489 ACAAATCACTCGTTCTATGCATCATAG 59.830 37.037 0.19 7.36 43.52 2.23
144 145 6.986231 ACAAATCACTCGTTCTATGCATCATA 59.014 34.615 0.19 0.00 0.00 2.15
145 146 5.819379 ACAAATCACTCGTTCTATGCATCAT 59.181 36.000 0.19 0.00 0.00 2.45
147 148 5.496387 CACAAATCACTCGTTCTATGCATC 58.504 41.667 0.19 0.00 0.00 3.91
148 149 4.333649 CCACAAATCACTCGTTCTATGCAT 59.666 41.667 3.79 3.79 0.00 3.96
150 151 3.684788 ACCACAAATCACTCGTTCTATGC 59.315 43.478 0.00 0.00 0.00 3.14
152 153 5.547465 TCAACCACAAATCACTCGTTCTAT 58.453 37.500 0.00 0.00 0.00 1.98
153 154 4.951254 TCAACCACAAATCACTCGTTCTA 58.049 39.130 0.00 0.00 0.00 2.10
154 155 3.804036 TCAACCACAAATCACTCGTTCT 58.196 40.909 0.00 0.00 0.00 3.01
155 156 3.560068 ACTCAACCACAAATCACTCGTTC 59.440 43.478 0.00 0.00 0.00 3.95
157 158 3.194005 ACTCAACCACAAATCACTCGT 57.806 42.857 0.00 0.00 0.00 4.18
158 159 4.307432 ACTACTCAACCACAAATCACTCG 58.693 43.478 0.00 0.00 0.00 4.18
159 160 4.691216 GGACTACTCAACCACAAATCACTC 59.309 45.833 0.00 0.00 0.00 3.51
160 161 4.102524 TGGACTACTCAACCACAAATCACT 59.897 41.667 0.00 0.00 0.00 3.41
161 162 4.385825 TGGACTACTCAACCACAAATCAC 58.614 43.478 0.00 0.00 0.00 3.06
162 163 4.698201 TGGACTACTCAACCACAAATCA 57.302 40.909 0.00 0.00 0.00 2.57
163 164 6.575162 AAATGGACTACTCAACCACAAATC 57.425 37.500 0.00 0.00 36.49 2.17
164 165 6.151144 GCTAAATGGACTACTCAACCACAAAT 59.849 38.462 0.00 0.00 36.49 2.32
165 166 5.472137 GCTAAATGGACTACTCAACCACAAA 59.528 40.000 0.00 0.00 36.49 2.83
167 168 4.564821 GGCTAAATGGACTACTCAACCACA 60.565 45.833 0.00 0.00 36.49 4.17
168 169 3.939592 GGCTAAATGGACTACTCAACCAC 59.060 47.826 0.00 0.00 36.49 4.16
170 171 3.200165 AGGGCTAAATGGACTACTCAACC 59.800 47.826 0.00 0.00 0.00 3.77
171 172 4.489306 AGGGCTAAATGGACTACTCAAC 57.511 45.455 0.00 0.00 0.00 3.18
174 175 4.120589 CGAAAGGGCTAAATGGACTACTC 58.879 47.826 0.00 0.00 0.00 2.59
175 176 3.773119 TCGAAAGGGCTAAATGGACTACT 59.227 43.478 0.00 0.00 0.00 2.57
176 177 4.133013 TCGAAAGGGCTAAATGGACTAC 57.867 45.455 0.00 0.00 0.00 2.73
178 179 3.545703 CATCGAAAGGGCTAAATGGACT 58.454 45.455 0.00 0.00 0.00 3.85
179 180 2.033424 GCATCGAAAGGGCTAAATGGAC 59.967 50.000 0.00 0.00 0.00 4.02
181 182 2.301346 AGCATCGAAAGGGCTAAATGG 58.699 47.619 0.00 0.00 39.67 3.16
182 183 3.699067 CAAGCATCGAAAGGGCTAAATG 58.301 45.455 4.95 0.00 40.35 2.32
183 184 2.099756 GCAAGCATCGAAAGGGCTAAAT 59.900 45.455 4.95 0.00 40.35 1.40
184 185 1.472480 GCAAGCATCGAAAGGGCTAAA 59.528 47.619 4.95 0.00 40.35 1.85
187 188 1.001641 AGCAAGCATCGAAAGGGCT 60.002 52.632 0.00 0.00 42.41 5.19
188 189 1.138247 CAGCAAGCATCGAAAGGGC 59.862 57.895 0.00 0.00 0.00 5.19
189 190 0.169672 CACAGCAAGCATCGAAAGGG 59.830 55.000 0.00 0.00 0.00 3.95
190 191 0.877071 ACACAGCAAGCATCGAAAGG 59.123 50.000 0.00 0.00 0.00 3.11
191 192 2.738846 AGTACACAGCAAGCATCGAAAG 59.261 45.455 0.00 0.00 0.00 2.62
193 194 2.337583 GAGTACACAGCAAGCATCGAA 58.662 47.619 0.00 0.00 0.00 3.71
194 195 1.404181 GGAGTACACAGCAAGCATCGA 60.404 52.381 0.00 0.00 0.00 3.59
195 196 1.002366 GGAGTACACAGCAAGCATCG 58.998 55.000 0.00 0.00 0.00 3.84
196 197 2.099141 TGGAGTACACAGCAAGCATC 57.901 50.000 0.00 0.00 0.00 3.91
207 208 5.134661 TGATATGATACACGGTGGAGTACA 58.865 41.667 13.48 6.61 0.00 2.90
208 209 5.700722 TGATATGATACACGGTGGAGTAC 57.299 43.478 13.48 0.84 0.00 2.73
209 210 6.911250 AATGATATGATACACGGTGGAGTA 57.089 37.500 13.48 0.00 0.00 2.59
210 211 5.808366 AATGATATGATACACGGTGGAGT 57.192 39.130 13.48 0.00 0.00 3.85
211 212 8.034804 TGATAAATGATATGATACACGGTGGAG 58.965 37.037 13.48 0.00 0.00 3.86
212 213 7.902087 TGATAAATGATATGATACACGGTGGA 58.098 34.615 13.48 3.76 0.00 4.02
213 214 8.546597 TTGATAAATGATATGATACACGGTGG 57.453 34.615 13.48 0.00 0.00 4.61
214 215 8.171196 GCTTGATAAATGATATGATACACGGTG 58.829 37.037 6.58 6.58 0.00 4.94
215 216 8.097038 AGCTTGATAAATGATATGATACACGGT 58.903 33.333 0.00 0.00 0.00 4.83
216 217 8.385858 CAGCTTGATAAATGATATGATACACGG 58.614 37.037 0.00 0.00 0.00 4.94
224 225 9.390795 GCAGTTAACAGCTTGATAAATGATATG 57.609 33.333 15.09 0.00 34.21 1.78
226 227 8.397906 GTGCAGTTAACAGCTTGATAAATGATA 58.602 33.333 21.64 0.00 34.21 2.15
410 411 8.664992 ACATATCCACATTGGGTATAACATGTA 58.335 33.333 0.00 0.00 41.75 2.29
481 482 6.149142 ACAATTTGGCATTTGCACGATTTAAT 59.851 30.769 4.74 0.00 44.36 1.40
522 523 7.765695 TCAAAAGAAAAGGATCACTAGCAAT 57.234 32.000 0.00 0.00 0.00 3.56
1089 1091 8.160106 GGGAGAAATAAATGAGTGATAGGATGT 58.840 37.037 0.00 0.00 0.00 3.06
1098 1100 8.796475 TGAGAAAAAGGGAGAAATAAATGAGTG 58.204 33.333 0.00 0.00 0.00 3.51
1414 1416 6.597672 ACATTGTAAATATCACGATGTGGTGT 59.402 34.615 16.86 1.13 45.26 4.16
1697 1699 2.068519 GCAAAATGCACCCAGTTAAGC 58.931 47.619 0.00 0.00 44.26 3.09
1946 1948 5.945784 CCATCCAGGAAAAACTATGACTTCA 59.054 40.000 0.00 0.00 41.22 3.02
2102 2104 8.579863 AGAATCAGCCTTTTATATAAACATGCC 58.420 33.333 7.43 0.00 0.00 4.40
2156 3610 6.667414 TGGCAAAGGATAACCATCTACATTTT 59.333 34.615 0.00 0.00 38.94 1.82
2241 3699 1.083489 ACACACACACAAACGTCCAG 58.917 50.000 0.00 0.00 0.00 3.86
2247 3743 0.242286 TGGCACACACACACACAAAC 59.758 50.000 0.00 0.00 0.00 2.93
2248 3744 2.646121 TGGCACACACACACACAAA 58.354 47.368 0.00 0.00 0.00 2.83
2249 3745 4.404691 TGGCACACACACACACAA 57.595 50.000 0.00 0.00 0.00 3.33
2291 3799 3.871594 GCATGTAACTAAATCCGAGCAGT 59.128 43.478 0.00 0.00 0.00 4.40
2294 3802 6.591834 AGATATGCATGTAACTAAATCCGAGC 59.408 38.462 10.16 0.00 0.00 5.03
2459 3974 7.069208 TGCTCATCTTCTAACATAGTGATCTGT 59.931 37.037 0.00 0.00 0.00 3.41
2475 3990 6.593382 ACACACTTCTCTAAATGCTCATCTTC 59.407 38.462 0.00 0.00 0.00 2.87
2523 4039 0.871057 GTGCAGCCAACTCTTCAGAC 59.129 55.000 0.00 0.00 0.00 3.51
2582 4098 2.110011 ACCAAGGTAAAACCAGGAGCAT 59.890 45.455 12.76 0.00 41.95 3.79
2656 4173 8.943085 AGATATGGATGGATGAAAGACTAACTT 58.057 33.333 0.00 0.00 40.98 2.66
2704 4221 5.121611 TCATGGTTGACATATTTGTGACGTC 59.878 40.000 9.11 9.11 37.84 4.34
2742 4259 6.211384 CACACCCAAAAGGAAGAGGAAATTAT 59.789 38.462 0.00 0.00 39.89 1.28
2837 4354 9.733219 CACAAAAATTTAAATCAAGCCATGTTT 57.267 25.926 0.10 0.00 0.00 2.83
2866 4383 7.658525 AGAGACTATCTCATCACAGAACATT 57.341 36.000 8.48 0.00 45.73 2.71
2890 4407 1.656587 ACTGGACCTGGCAGACATAA 58.343 50.000 17.94 0.00 0.00 1.90
3041 20214 2.439409 CACAAGGCTGGATTCATGTGA 58.561 47.619 7.31 0.00 40.32 3.58
3055 20228 6.076981 AGAAATACAAAACAGAGCACAAGG 57.923 37.500 0.00 0.00 0.00 3.61
3084 20257 1.892209 TACACACAGACTCTGCTCGA 58.108 50.000 5.92 0.00 34.37 4.04
3107 20280 9.175577 TGGATTCCTCCTATCATTCTTATTTCT 57.824 33.333 3.95 0.00 42.59 2.52
3108 20281 9.447157 CTGGATTCCTCCTATCATTCTTATTTC 57.553 37.037 3.95 0.00 42.59 2.17
3109 20282 7.887495 GCTGGATTCCTCCTATCATTCTTATTT 59.113 37.037 3.95 0.00 42.59 1.40
3110 20283 7.401246 GCTGGATTCCTCCTATCATTCTTATT 58.599 38.462 3.95 0.00 42.59 1.40
3111 20284 6.069731 GGCTGGATTCCTCCTATCATTCTTAT 60.070 42.308 3.95 0.00 42.59 1.73
3112 20285 5.249393 GGCTGGATTCCTCCTATCATTCTTA 59.751 44.000 3.95 0.00 42.59 2.10
3113 20286 4.042684 GGCTGGATTCCTCCTATCATTCTT 59.957 45.833 3.95 0.00 42.59 2.52
3114 20287 3.586618 GGCTGGATTCCTCCTATCATTCT 59.413 47.826 3.95 0.00 42.59 2.40
3115 20288 3.586618 AGGCTGGATTCCTCCTATCATTC 59.413 47.826 13.27 0.00 42.59 2.67
3116 20289 3.586618 GAGGCTGGATTCCTCCTATCATT 59.413 47.826 14.43 0.00 43.32 2.57
3117 20290 3.180507 GAGGCTGGATTCCTCCTATCAT 58.819 50.000 14.43 0.00 43.32 2.45
3118 20291 2.614259 GAGGCTGGATTCCTCCTATCA 58.386 52.381 14.43 0.00 43.32 2.15
3125 20298 0.341258 TCTGAGGAGGCTGGATTCCT 59.659 55.000 3.95 0.00 46.35 3.36
3126 20299 0.467804 GTCTGAGGAGGCTGGATTCC 59.532 60.000 0.00 0.00 0.00 3.01
3127 20300 1.198713 TGTCTGAGGAGGCTGGATTC 58.801 55.000 0.00 0.00 0.00 2.52
3128 20301 1.280421 GTTGTCTGAGGAGGCTGGATT 59.720 52.381 0.00 0.00 0.00 3.01
3129 20302 0.908198 GTTGTCTGAGGAGGCTGGAT 59.092 55.000 0.00 0.00 0.00 3.41
3130 20303 0.178921 AGTTGTCTGAGGAGGCTGGA 60.179 55.000 0.00 0.00 0.00 3.86
3131 20304 1.561643 TAGTTGTCTGAGGAGGCTGG 58.438 55.000 0.00 0.00 0.00 4.85
3132 20305 2.158986 CCATAGTTGTCTGAGGAGGCTG 60.159 54.545 0.00 0.00 0.00 4.85
3133 20306 2.114616 CCATAGTTGTCTGAGGAGGCT 58.885 52.381 0.00 0.00 0.00 4.58
3134 20307 1.834263 ACCATAGTTGTCTGAGGAGGC 59.166 52.381 0.00 0.00 0.00 4.70
3135 20308 2.419297 GCACCATAGTTGTCTGAGGAGG 60.419 54.545 0.00 0.00 0.00 4.30
3136 20309 2.736719 CGCACCATAGTTGTCTGAGGAG 60.737 54.545 0.00 0.00 0.00 3.69
3137 20310 1.204704 CGCACCATAGTTGTCTGAGGA 59.795 52.381 0.00 0.00 0.00 3.71
3138 20311 1.066858 ACGCACCATAGTTGTCTGAGG 60.067 52.381 0.00 0.00 0.00 3.86
3139 20312 1.995484 CACGCACCATAGTTGTCTGAG 59.005 52.381 0.00 0.00 0.00 3.35
3140 20313 1.939381 GCACGCACCATAGTTGTCTGA 60.939 52.381 0.00 0.00 0.00 3.27
3141 20314 0.443869 GCACGCACCATAGTTGTCTG 59.556 55.000 0.00 0.00 0.00 3.51
3142 20315 0.034756 TGCACGCACCATAGTTGTCT 59.965 50.000 0.00 0.00 0.00 3.41
3143 20316 0.165944 GTGCACGCACCATAGTTGTC 59.834 55.000 11.13 0.00 40.79 3.18
3144 20317 0.533978 TGTGCACGCACCATAGTTGT 60.534 50.000 18.91 0.00 45.63 3.32
3145 20318 0.804364 ATGTGCACGCACCATAGTTG 59.196 50.000 18.91 0.00 45.63 3.16
3146 20319 0.804364 CATGTGCACGCACCATAGTT 59.196 50.000 18.91 0.00 45.63 2.24
3147 20320 0.036483 TCATGTGCACGCACCATAGT 60.036 50.000 18.91 0.00 45.63 2.12
3148 20321 1.262417 GATCATGTGCACGCACCATAG 59.738 52.381 18.91 6.78 45.63 2.23
3149 20322 1.298602 GATCATGTGCACGCACCATA 58.701 50.000 18.91 4.96 45.63 2.74
3150 20323 1.378882 GGATCATGTGCACGCACCAT 61.379 55.000 18.91 9.87 45.63 3.55
3151 20324 2.039974 GGATCATGTGCACGCACCA 61.040 57.895 18.91 8.04 45.63 4.17
3152 20325 2.764314 GGGATCATGTGCACGCACC 61.764 63.158 18.91 10.60 45.63 5.01
3153 20326 1.746615 AGGGATCATGTGCACGCAC 60.747 57.895 15.20 15.20 46.33 5.34
3154 20327 1.746239 CAGGGATCATGTGCACGCA 60.746 57.895 13.13 0.00 0.00 5.24
3155 20328 1.026182 TTCAGGGATCATGTGCACGC 61.026 55.000 13.13 0.00 0.00 5.34
3156 20329 0.729116 GTTCAGGGATCATGTGCACG 59.271 55.000 13.13 0.00 0.00 5.34
3157 20330 1.098050 GGTTCAGGGATCATGTGCAC 58.902 55.000 10.75 10.75 0.00 4.57
3158 20331 0.034186 GGGTTCAGGGATCATGTGCA 60.034 55.000 0.00 0.00 0.00 4.57
3159 20332 0.753111 GGGGTTCAGGGATCATGTGC 60.753 60.000 0.00 0.00 0.00 4.57
3160 20333 0.921896 AGGGGTTCAGGGATCATGTG 59.078 55.000 0.00 0.00 0.00 3.21
3161 20334 1.285962 CAAGGGGTTCAGGGATCATGT 59.714 52.381 0.00 0.00 0.00 3.21
3162 20335 1.285962 ACAAGGGGTTCAGGGATCATG 59.714 52.381 0.00 0.00 0.00 3.07
3163 20336 1.566231 GACAAGGGGTTCAGGGATCAT 59.434 52.381 0.00 0.00 0.00 2.45
3164 20337 0.991920 GACAAGGGGTTCAGGGATCA 59.008 55.000 0.00 0.00 0.00 2.92
3165 20338 1.290134 AGACAAGGGGTTCAGGGATC 58.710 55.000 0.00 0.00 0.00 3.36
3166 20339 1.355720 CAAGACAAGGGGTTCAGGGAT 59.644 52.381 0.00 0.00 0.00 3.85
3167 20340 0.771127 CAAGACAAGGGGTTCAGGGA 59.229 55.000 0.00 0.00 0.00 4.20
3168 20341 0.895559 GCAAGACAAGGGGTTCAGGG 60.896 60.000 0.00 0.00 0.00 4.45
3169 20342 0.895559 GGCAAGACAAGGGGTTCAGG 60.896 60.000 0.00 0.00 0.00 3.86
3170 20343 1.237285 CGGCAAGACAAGGGGTTCAG 61.237 60.000 0.00 0.00 0.00 3.02
3171 20344 1.228124 CGGCAAGACAAGGGGTTCA 60.228 57.895 0.00 0.00 0.00 3.18
3172 20345 1.971695 CCGGCAAGACAAGGGGTTC 60.972 63.158 0.00 0.00 0.00 3.62
3173 20346 2.115266 CCGGCAAGACAAGGGGTT 59.885 61.111 0.00 0.00 0.00 4.11
3174 20347 2.292785 AAACCGGCAAGACAAGGGGT 62.293 55.000 0.00 0.00 0.00 4.95
3175 20348 1.524008 GAAACCGGCAAGACAAGGGG 61.524 60.000 0.00 0.00 0.00 4.79
3176 20349 0.537371 AGAAACCGGCAAGACAAGGG 60.537 55.000 0.00 0.00 0.00 3.95
3177 20350 1.266989 GAAGAAACCGGCAAGACAAGG 59.733 52.381 0.00 0.00 0.00 3.61
3178 20351 1.946768 TGAAGAAACCGGCAAGACAAG 59.053 47.619 0.00 0.00 0.00 3.16
3179 20352 2.045561 TGAAGAAACCGGCAAGACAA 57.954 45.000 0.00 0.00 0.00 3.18
3180 20353 2.151202 GATGAAGAAACCGGCAAGACA 58.849 47.619 0.00 0.00 0.00 3.41
3181 20354 2.416893 GAGATGAAGAAACCGGCAAGAC 59.583 50.000 0.00 0.00 0.00 3.01
3182 20355 2.615493 GGAGATGAAGAAACCGGCAAGA 60.615 50.000 0.00 0.00 0.00 3.02
3183 20356 1.740025 GGAGATGAAGAAACCGGCAAG 59.260 52.381 0.00 0.00 0.00 4.01
3184 20357 1.613255 GGGAGATGAAGAAACCGGCAA 60.613 52.381 0.00 0.00 0.00 4.52
3185 20358 0.035439 GGGAGATGAAGAAACCGGCA 60.035 55.000 0.00 0.00 0.00 5.69
3186 20359 0.748367 GGGGAGATGAAGAAACCGGC 60.748 60.000 0.00 0.00 0.00 6.13
3187 20360 0.912486 AGGGGAGATGAAGAAACCGG 59.088 55.000 0.00 0.00 0.00 5.28
3188 20361 1.134371 GGAGGGGAGATGAAGAAACCG 60.134 57.143 0.00 0.00 0.00 4.44
3189 20362 2.200955 AGGAGGGGAGATGAAGAAACC 58.799 52.381 0.00 0.00 0.00 3.27
3190 20363 3.009584 ACAAGGAGGGGAGATGAAGAAAC 59.990 47.826 0.00 0.00 0.00 2.78
3191 20364 3.009473 CACAAGGAGGGGAGATGAAGAAA 59.991 47.826 0.00 0.00 0.00 2.52
3192 20365 2.573462 CACAAGGAGGGGAGATGAAGAA 59.427 50.000 0.00 0.00 0.00 2.52
3193 20366 2.191400 CACAAGGAGGGGAGATGAAGA 58.809 52.381 0.00 0.00 0.00 2.87
3194 20367 2.191400 TCACAAGGAGGGGAGATGAAG 58.809 52.381 0.00 0.00 0.00 3.02
3195 20368 2.342406 TCACAAGGAGGGGAGATGAA 57.658 50.000 0.00 0.00 0.00 2.57
3196 20369 2.575921 ATCACAAGGAGGGGAGATGA 57.424 50.000 0.00 0.00 0.00 2.92
3197 20370 2.507058 TGAATCACAAGGAGGGGAGATG 59.493 50.000 0.00 0.00 0.00 2.90
3198 20371 2.850833 TGAATCACAAGGAGGGGAGAT 58.149 47.619 0.00 0.00 0.00 2.75
3199 20372 2.342406 TGAATCACAAGGAGGGGAGA 57.658 50.000 0.00 0.00 0.00 3.71
3200 20373 3.659183 AATGAATCACAAGGAGGGGAG 57.341 47.619 0.00 0.00 0.00 4.30
3201 20374 4.111577 ACTAATGAATCACAAGGAGGGGA 58.888 43.478 0.00 0.00 0.00 4.81
3202 20375 4.510167 ACTAATGAATCACAAGGAGGGG 57.490 45.455 0.00 0.00 0.00 4.79
3203 20376 5.711976 ACAAACTAATGAATCACAAGGAGGG 59.288 40.000 0.00 0.00 0.00 4.30
3204 20377 6.824305 ACAAACTAATGAATCACAAGGAGG 57.176 37.500 0.00 0.00 0.00 4.30
3205 20378 8.971321 CAAAACAAACTAATGAATCACAAGGAG 58.029 33.333 0.00 0.00 0.00 3.69
3206 20379 8.474025 ACAAAACAAACTAATGAATCACAAGGA 58.526 29.630 0.00 0.00 0.00 3.36
3207 20380 8.542132 CACAAAACAAACTAATGAATCACAAGG 58.458 33.333 0.00 0.00 0.00 3.61
3208 20381 9.086336 ACACAAAACAAACTAATGAATCACAAG 57.914 29.630 0.00 0.00 0.00 3.16
3209 20382 8.867935 CACACAAAACAAACTAATGAATCACAA 58.132 29.630 0.00 0.00 0.00 3.33
3210 20383 7.009999 GCACACAAAACAAACTAATGAATCACA 59.990 33.333 0.00 0.00 0.00 3.58
3211 20384 7.009999 TGCACACAAAACAAACTAATGAATCAC 59.990 33.333 0.00 0.00 0.00 3.06
3212 20385 7.038048 TGCACACAAAACAAACTAATGAATCA 58.962 30.769 0.00 0.00 0.00 2.57
3213 20386 7.222611 ACTGCACACAAAACAAACTAATGAATC 59.777 33.333 0.00 0.00 0.00 2.52
3214 20387 7.041107 ACTGCACACAAAACAAACTAATGAAT 58.959 30.769 0.00 0.00 0.00 2.57
3215 20388 6.393990 ACTGCACACAAAACAAACTAATGAA 58.606 32.000 0.00 0.00 0.00 2.57
3216 20389 5.960113 ACTGCACACAAAACAAACTAATGA 58.040 33.333 0.00 0.00 0.00 2.57
3217 20390 6.468484 CAACTGCACACAAAACAAACTAATG 58.532 36.000 0.00 0.00 0.00 1.90
3218 20391 5.063312 GCAACTGCACACAAAACAAACTAAT 59.937 36.000 0.00 0.00 41.59 1.73
3219 20392 4.387256 GCAACTGCACACAAAACAAACTAA 59.613 37.500 0.00 0.00 41.59 2.24
3220 20393 3.923461 GCAACTGCACACAAAACAAACTA 59.077 39.130 0.00 0.00 41.59 2.24
3221 20394 2.736192 GCAACTGCACACAAAACAAACT 59.264 40.909 0.00 0.00 41.59 2.66
3222 20395 2.736192 AGCAACTGCACACAAAACAAAC 59.264 40.909 4.22 0.00 45.16 2.93
3223 20396 2.992543 GAGCAACTGCACACAAAACAAA 59.007 40.909 4.22 0.00 45.16 2.83
3224 20397 2.605030 GAGCAACTGCACACAAAACAA 58.395 42.857 4.22 0.00 45.16 2.83
3225 20398 1.135141 GGAGCAACTGCACACAAAACA 60.135 47.619 4.22 0.00 45.16 2.83
3226 20399 1.559831 GGAGCAACTGCACACAAAAC 58.440 50.000 4.22 0.00 45.16 2.43
3227 20400 0.100325 CGGAGCAACTGCACACAAAA 59.900 50.000 4.22 0.00 45.16 2.44
3228 20401 0.746204 TCGGAGCAACTGCACACAAA 60.746 50.000 4.22 0.00 45.16 2.83
3229 20402 0.534877 ATCGGAGCAACTGCACACAA 60.535 50.000 4.22 0.00 45.16 3.33
3230 20403 0.950555 GATCGGAGCAACTGCACACA 60.951 55.000 4.22 0.00 45.16 3.72
3231 20404 0.671781 AGATCGGAGCAACTGCACAC 60.672 55.000 4.22 0.00 45.16 3.82
3232 20405 0.671472 CAGATCGGAGCAACTGCACA 60.671 55.000 4.22 0.00 45.16 4.57
3233 20406 1.364626 CCAGATCGGAGCAACTGCAC 61.365 60.000 4.22 0.00 45.16 4.57
3234 20407 1.078918 CCAGATCGGAGCAACTGCA 60.079 57.895 4.22 0.00 45.16 4.41
3235 20408 1.219124 TCCAGATCGGAGCAACTGC 59.781 57.895 0.00 0.00 39.64 4.40
3243 20416 0.041238 ACCACCTCTTCCAGATCGGA 59.959 55.000 0.00 0.00 44.40 4.55
3244 20417 0.176680 CACCACCTCTTCCAGATCGG 59.823 60.000 0.00 0.00 0.00 4.18
3245 20418 0.176680 CCACCACCTCTTCCAGATCG 59.823 60.000 0.00 0.00 0.00 3.69
3246 20419 1.065854 CACCACCACCTCTTCCAGATC 60.066 57.143 0.00 0.00 0.00 2.75
3247 20420 0.987294 CACCACCACCTCTTCCAGAT 59.013 55.000 0.00 0.00 0.00 2.90
3248 20421 1.768684 GCACCACCACCTCTTCCAGA 61.769 60.000 0.00 0.00 0.00 3.86
3249 20422 1.302832 GCACCACCACCTCTTCCAG 60.303 63.158 0.00 0.00 0.00 3.86
3250 20423 0.472925 TAGCACCACCACCTCTTCCA 60.473 55.000 0.00 0.00 0.00 3.53
3251 20424 0.912486 ATAGCACCACCACCTCTTCC 59.088 55.000 0.00 0.00 0.00 3.46
3252 20425 2.290323 ACAATAGCACCACCACCTCTTC 60.290 50.000 0.00 0.00 0.00 2.87
3253 20426 1.705186 ACAATAGCACCACCACCTCTT 59.295 47.619 0.00 0.00 0.00 2.85
3254 20427 1.362224 ACAATAGCACCACCACCTCT 58.638 50.000 0.00 0.00 0.00 3.69
3255 20428 1.812571 CAACAATAGCACCACCACCTC 59.187 52.381 0.00 0.00 0.00 3.85
3256 20429 1.144913 ACAACAATAGCACCACCACCT 59.855 47.619 0.00 0.00 0.00 4.00
3257 20430 1.616159 ACAACAATAGCACCACCACC 58.384 50.000 0.00 0.00 0.00 4.61
3258 20431 2.862140 GCAACAACAATAGCACCACCAC 60.862 50.000 0.00 0.00 0.00 4.16
3259 20432 1.339610 GCAACAACAATAGCACCACCA 59.660 47.619 0.00 0.00 0.00 4.17
3260 20433 1.613437 AGCAACAACAATAGCACCACC 59.387 47.619 0.00 0.00 0.00 4.61
3261 20434 2.664916 CAGCAACAACAATAGCACCAC 58.335 47.619 0.00 0.00 0.00 4.16
3262 20435 1.000385 GCAGCAACAACAATAGCACCA 60.000 47.619 0.00 0.00 0.00 4.17
3263 20436 1.270550 AGCAGCAACAACAATAGCACC 59.729 47.619 0.00 0.00 0.00 5.01
3264 20437 2.322161 CAGCAGCAACAACAATAGCAC 58.678 47.619 0.00 0.00 0.00 4.40
3265 20438 1.336148 GCAGCAGCAACAACAATAGCA 60.336 47.619 0.00 0.00 41.58 3.49
3266 20439 1.343506 GCAGCAGCAACAACAATAGC 58.656 50.000 0.00 0.00 41.58 2.97
3278 20451 4.687215 TCGTCCACCTGCAGCAGC 62.687 66.667 17.81 1.71 42.57 5.25
3279 20452 2.433838 CTCGTCCACCTGCAGCAG 60.434 66.667 16.23 16.23 0.00 4.24
3280 20453 4.007644 CCTCGTCCACCTGCAGCA 62.008 66.667 8.66 0.00 0.00 4.41
3282 20455 4.007644 TGCCTCGTCCACCTGCAG 62.008 66.667 6.78 6.78 0.00 4.41
3283 20456 4.314440 GTGCCTCGTCCACCTGCA 62.314 66.667 0.00 0.00 0.00 4.41
3285 20458 3.633094 CTCGTGCCTCGTCCACCTG 62.633 68.421 0.00 0.00 40.80 4.00
3286 20459 3.374402 CTCGTGCCTCGTCCACCT 61.374 66.667 0.00 0.00 40.80 4.00
3304 20477 2.040043 AGGGAGGAGCCATGAGGG 60.040 66.667 0.00 0.00 38.95 4.30
3305 20478 2.146061 GGAGGGAGGAGCCATGAGG 61.146 68.421 0.00 0.00 38.95 3.86
3306 20479 1.074623 AGGAGGGAGGAGCCATGAG 60.075 63.158 0.00 0.00 38.95 2.90
3307 20480 1.074926 GAGGAGGGAGGAGCCATGA 60.075 63.158 0.00 0.00 38.95 3.07
3308 20481 2.146061 GGAGGAGGGAGGAGCCATG 61.146 68.421 0.00 0.00 38.95 3.66
3309 20482 2.288643 GGAGGAGGGAGGAGCCAT 59.711 66.667 0.00 0.00 38.95 4.40
3310 20483 2.955246 AGGAGGAGGGAGGAGCCA 60.955 66.667 0.00 0.00 38.95 4.75
3311 20484 2.123033 GAGGAGGAGGGAGGAGCC 60.123 72.222 0.00 0.00 0.00 4.70
3312 20485 2.123033 GGAGGAGGAGGGAGGAGC 60.123 72.222 0.00 0.00 0.00 4.70
3313 20486 2.612251 GGGAGGAGGAGGGAGGAG 59.388 72.222 0.00 0.00 0.00 3.69
3314 20487 3.036959 GGGGAGGAGGAGGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
3315 20488 4.179599 GGGGGAGGAGGAGGGAGG 62.180 77.778 0.00 0.00 0.00 4.30
3331 20504 4.803426 GAGCTCACCGCGTCAGGG 62.803 72.222 9.40 0.00 45.59 4.45
3332 20505 2.407428 TAGAGCTCACCGCGTCAGG 61.407 63.158 17.77 0.00 45.59 3.86
3333 20506 1.226435 GTAGAGCTCACCGCGTCAG 60.226 63.158 17.77 0.00 45.59 3.51
3334 20507 2.697761 GGTAGAGCTCACCGCGTCA 61.698 63.158 17.77 0.00 45.59 4.35
3335 20508 2.102553 GGTAGAGCTCACCGCGTC 59.897 66.667 17.77 0.00 45.59 5.19
3336 20509 3.450115 GGGTAGAGCTCACCGCGT 61.450 66.667 17.77 0.00 45.59 6.01
3337 20510 4.208686 GGGGTAGAGCTCACCGCG 62.209 72.222 25.30 0.00 45.59 6.46
3338 20511 3.851128 GGGGGTAGAGCTCACCGC 61.851 72.222 28.52 28.52 45.68 5.68
3339 20512 2.042843 AGGGGGTAGAGCTCACCG 60.043 66.667 17.77 0.00 36.89 4.94
3340 20513 0.325765 AAGAGGGGGTAGAGCTCACC 60.326 60.000 17.77 19.59 35.15 4.02
3341 20514 1.116308 GAAGAGGGGGTAGAGCTCAC 58.884 60.000 17.77 11.76 0.00 3.51
3342 20515 0.032017 GGAAGAGGGGGTAGAGCTCA 60.032 60.000 17.77 0.00 0.00 4.26
3343 20516 0.263468 AGGAAGAGGGGGTAGAGCTC 59.737 60.000 5.27 5.27 0.00 4.09
3344 20517 1.218450 GTAGGAAGAGGGGGTAGAGCT 59.782 57.143 0.00 0.00 0.00 4.09
3345 20518 1.707106 GTAGGAAGAGGGGGTAGAGC 58.293 60.000 0.00 0.00 0.00 4.09
3346 20519 1.133104 GGGTAGGAAGAGGGGGTAGAG 60.133 61.905 0.00 0.00 0.00 2.43
3347 20520 0.939698 GGGTAGGAAGAGGGGGTAGA 59.060 60.000 0.00 0.00 0.00 2.59
3348 20521 0.105090 GGGGTAGGAAGAGGGGGTAG 60.105 65.000 0.00 0.00 0.00 3.18
3349 20522 1.606514 GGGGGTAGGAAGAGGGGGTA 61.607 65.000 0.00 0.00 0.00 3.69
3350 20523 2.792951 GGGGTAGGAAGAGGGGGT 59.207 66.667 0.00 0.00 0.00 4.95
3351 20524 2.039724 GGGGGTAGGAAGAGGGGG 60.040 72.222 0.00 0.00 0.00 5.40
3369 20542 3.843027 AGATAAGATAGATGTGCAGGGGG 59.157 47.826 0.00 0.00 0.00 5.40
3370 20543 5.954752 TCTAGATAAGATAGATGTGCAGGGG 59.045 44.000 0.00 0.00 0.00 4.79
3371 20544 7.658525 ATCTAGATAAGATAGATGTGCAGGG 57.341 40.000 2.53 0.00 43.45 4.45
3388 20561 9.976511 CCACAATTGCAATCAAATTATCTAGAT 57.023 29.630 13.38 10.73 35.56 1.98
3389 20562 8.970020 ACCACAATTGCAATCAAATTATCTAGA 58.030 29.630 13.38 0.00 35.56 2.43
3390 20563 9.590451 AACCACAATTGCAATCAAATTATCTAG 57.410 29.630 13.38 0.00 35.56 2.43
3391 20564 9.585099 GAACCACAATTGCAATCAAATTATCTA 57.415 29.630 13.38 0.00 35.56 1.98
3392 20565 8.316214 AGAACCACAATTGCAATCAAATTATCT 58.684 29.630 13.38 8.70 35.56 1.98
3393 20566 8.385111 CAGAACCACAATTGCAATCAAATTATC 58.615 33.333 13.38 6.63 35.56 1.75
3394 20567 7.334921 CCAGAACCACAATTGCAATCAAATTAT 59.665 33.333 13.38 0.00 35.56 1.28
3395 20568 6.649973 CCAGAACCACAATTGCAATCAAATTA 59.350 34.615 13.38 0.00 35.56 1.40
3396 20569 5.470777 CCAGAACCACAATTGCAATCAAATT 59.529 36.000 13.38 4.12 35.56 1.82
3397 20570 4.998672 CCAGAACCACAATTGCAATCAAAT 59.001 37.500 13.38 0.00 35.56 2.32
3398 20571 4.100653 TCCAGAACCACAATTGCAATCAAA 59.899 37.500 13.38 0.00 35.56 2.69
3399 20572 3.640498 TCCAGAACCACAATTGCAATCAA 59.360 39.130 13.38 0.00 36.51 2.57
3400 20573 3.005684 GTCCAGAACCACAATTGCAATCA 59.994 43.478 13.38 0.00 0.00 2.57
3401 20574 3.005684 TGTCCAGAACCACAATTGCAATC 59.994 43.478 13.38 0.00 0.00 2.67
3402 20575 2.964464 TGTCCAGAACCACAATTGCAAT 59.036 40.909 5.99 5.99 0.00 3.56
3403 20576 2.100584 GTGTCCAGAACCACAATTGCAA 59.899 45.455 5.05 0.00 0.00 4.08
3404 20577 1.680735 GTGTCCAGAACCACAATTGCA 59.319 47.619 5.05 0.00 0.00 4.08
3405 20578 1.334960 CGTGTCCAGAACCACAATTGC 60.335 52.381 5.05 0.00 0.00 3.56
3406 20579 2.032030 GTCGTGTCCAGAACCACAATTG 60.032 50.000 3.24 3.24 0.00 2.32
3407 20580 2.218603 GTCGTGTCCAGAACCACAATT 58.781 47.619 0.00 0.00 0.00 2.32
3408 20581 1.542547 GGTCGTGTCCAGAACCACAAT 60.543 52.381 0.00 0.00 0.00 2.71
3409 20582 0.179067 GGTCGTGTCCAGAACCACAA 60.179 55.000 0.00 0.00 0.00 3.33
3410 20583 1.046472 AGGTCGTGTCCAGAACCACA 61.046 55.000 0.00 0.00 0.00 4.17
3411 20584 0.600255 CAGGTCGTGTCCAGAACCAC 60.600 60.000 0.00 0.00 0.00 4.16
3412 20585 1.745890 CAGGTCGTGTCCAGAACCA 59.254 57.895 0.00 0.00 0.00 3.67
3413 20586 1.004918 CCAGGTCGTGTCCAGAACC 60.005 63.158 0.00 0.00 0.00 3.62
3414 20587 0.600255 CACCAGGTCGTGTCCAGAAC 60.600 60.000 0.00 0.00 0.00 3.01
3415 20588 1.745890 CACCAGGTCGTGTCCAGAA 59.254 57.895 0.00 0.00 0.00 3.02
3416 20589 2.207229 CCACCAGGTCGTGTCCAGA 61.207 63.158 0.00 0.00 31.47 3.86
3417 20590 2.343758 CCACCAGGTCGTGTCCAG 59.656 66.667 0.00 0.00 31.47 3.86
3427 20600 3.763360 TGAAATTAGCAATCACCACCAGG 59.237 43.478 0.00 0.00 42.21 4.45
3428 20601 4.460382 ACTGAAATTAGCAATCACCACCAG 59.540 41.667 0.00 0.00 0.00 4.00
3429 20602 4.218200 CACTGAAATTAGCAATCACCACCA 59.782 41.667 0.00 0.00 0.00 4.17
3430 20603 4.218417 ACACTGAAATTAGCAATCACCACC 59.782 41.667 0.00 0.00 0.00 4.61
3431 20604 5.376854 ACACTGAAATTAGCAATCACCAC 57.623 39.130 0.00 0.00 0.00 4.16
3432 20605 7.517614 TTAACACTGAAATTAGCAATCACCA 57.482 32.000 0.00 0.00 0.00 4.17
3433 20606 8.810652 TTTTAACACTGAAATTAGCAATCACC 57.189 30.769 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.