Multiple sequence alignment - TraesCS2B01G134500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G134500 chr2B 100.000 5306 0 0 1 5306 100922471 100917166 0.000000e+00 9799.0
1 TraesCS2B01G134500 chr2B 94.247 2051 104 10 3265 5306 101439518 101437473 0.000000e+00 3121.0
2 TraesCS2B01G134500 chr2B 94.530 1426 52 10 3882 5304 101428154 101426752 0.000000e+00 2178.0
3 TraesCS2B01G134500 chr2B 90.198 908 54 13 1313 2192 101441069 101440169 0.000000e+00 1151.0
4 TraesCS2B01G134500 chr2B 87.996 908 55 20 1313 2192 101415681 101414800 0.000000e+00 1024.0
5 TraesCS2B01G134500 chr2B 79.404 369 60 12 1791 2151 100849355 100848995 4.100000e-61 246.0
6 TraesCS2B01G134500 chr2B 91.538 130 10 1 1084 1213 101415920 101415792 1.520000e-40 178.0
7 TraesCS2B01G134500 chr2B 90.769 130 11 1 1084 1213 101441614 101441486 7.060000e-39 172.0
8 TraesCS2B01G134500 chr2B 95.312 64 1 1 1231 1294 101415806 101415745 3.380000e-17 100.0
9 TraesCS2B01G134500 chr2B 95.082 61 1 1 1231 1291 101441500 101441442 1.570000e-15 95.3
10 TraesCS2B01G134500 chr2B 92.982 57 3 1 2359 2414 101972970 101973026 1.220000e-11 82.4
11 TraesCS2B01G134500 chr2D 91.998 2037 139 17 3280 5306 64604981 64602959 0.000000e+00 2837.0
12 TraesCS2B01G134500 chr2D 95.139 1008 37 4 1196 2192 64606709 64605703 0.000000e+00 1580.0
13 TraesCS2B01G134500 chr2D 94.940 1008 43 6 8 1012 64615805 64614803 0.000000e+00 1572.0
14 TraesCS2B01G134500 chr2D 88.559 1180 95 21 3110 4268 68864065 68862905 0.000000e+00 1395.0
15 TraesCS2B01G134500 chr2D 89.689 805 48 18 1442 2212 68866244 68865441 0.000000e+00 994.0
16 TraesCS2B01G134500 chr2D 91.047 659 39 8 1554 2192 69215421 69216079 0.000000e+00 872.0
17 TraesCS2B01G134500 chr2D 82.532 624 92 16 431 1044 36773197 36773813 2.810000e-147 532.0
18 TraesCS2B01G134500 chr2D 89.057 265 19 5 1304 1558 69151601 69151865 2.380000e-83 320.0
19 TraesCS2B01G134500 chr2D 97.279 147 4 0 1066 1212 64614532 64614386 3.170000e-62 250.0
20 TraesCS2B01G134500 chr2D 94.366 71 3 1 1143 1213 69151438 69151507 2.020000e-19 108.0
21 TraesCS2B01G134500 chr2D 84.615 104 16 0 3316 3419 64597918 64597815 2.610000e-18 104.0
22 TraesCS2B01G134500 chr2D 81.890 127 20 3 3296 3419 68857683 68857557 2.610000e-18 104.0
23 TraesCS2B01G134500 chr2D 92.647 68 5 0 1228 1295 69151490 69151557 1.220000e-16 99.0
24 TraesCS2B01G134500 chr2D 92.727 55 3 1 124 178 647057170 647057117 1.580000e-10 78.7
25 TraesCS2B01G134500 chr2D 97.297 37 1 0 2912 2948 68865016 68864980 4.440000e-06 63.9
26 TraesCS2B01G134500 chr2D 97.059 34 0 1 4402 4434 627642999 627643032 7.420000e-04 56.5
27 TraesCS2B01G134500 chr2A 92.720 1566 91 15 3276 4832 65698636 65697085 0.000000e+00 2239.0
28 TraesCS2B01G134500 chr2A 87.276 1006 65 31 1231 2189 65700257 65699268 0.000000e+00 1090.0
29 TraesCS2B01G134500 chr2A 86.475 939 107 16 123 1053 653002690 653003616 0.000000e+00 1013.0
30 TraesCS2B01G134500 chr2A 89.975 399 37 2 4908 5305 65697080 65696684 3.660000e-141 512.0
31 TraesCS2B01G134500 chr2A 77.401 354 71 4 4959 5306 776150375 776150025 9.010000e-48 202.0
32 TraesCS2B01G134500 chr2A 91.379 58 4 1 2358 2414 66083352 66083409 1.580000e-10 78.7
33 TraesCS2B01G134500 chr5B 89.412 935 90 8 123 1053 109091652 109092581 0.000000e+00 1170.0
34 TraesCS2B01G134500 chr5B 80.866 277 40 10 5038 5306 690324576 690324305 6.970000e-49 206.0
35 TraesCS2B01G134500 chr5B 76.613 372 75 7 4935 5305 208712516 208712156 1.510000e-45 195.0
36 TraesCS2B01G134500 chr4A 82.246 935 138 21 123 1052 652844409 652843498 0.000000e+00 782.0
37 TraesCS2B01G134500 chr4A 84.615 117 14 3 3315 3429 162129500 162129386 4.340000e-21 113.0
38 TraesCS2B01G134500 chr7B 82.889 713 108 11 337 1045 376770859 376770157 3.490000e-176 628.0
39 TraesCS2B01G134500 chr1B 84.927 617 86 7 435 1047 547361375 547361988 7.550000e-173 617.0
40 TraesCS2B01G134500 chr1B 79.325 948 134 36 123 1053 610975868 610976770 4.540000e-170 608.0
41 TraesCS2B01G134500 chr1B 79.365 252 35 14 4404 4647 476344473 476344715 1.530000e-35 161.0
42 TraesCS2B01G134500 chr5A 75.000 924 166 47 4404 5304 60097116 60097997 3.020000e-97 366.0
43 TraesCS2B01G134500 chr6D 81.347 386 62 10 672 1053 299147662 299147283 6.680000e-79 305.0
44 TraesCS2B01G134500 chr5D 80.729 384 71 3 4924 5305 202853819 202854201 4.020000e-76 296.0
45 TraesCS2B01G134500 chr5D 87.097 124 13 3 2 124 545282272 545282151 2.580000e-28 137.0
46 TraesCS2B01G134500 chr5D 91.228 57 4 1 122 178 531252021 531251966 5.700000e-10 76.8
47 TraesCS2B01G134500 chr7D 78.685 441 69 19 131 567 625594839 625594420 2.440000e-68 270.0
48 TraesCS2B01G134500 chr7D 88.462 208 20 4 119 322 600224194 600224401 1.140000e-61 248.0
49 TraesCS2B01G134500 chr7D 88.268 179 16 5 120 293 13304722 13304544 5.380000e-50 209.0
50 TraesCS2B01G134500 chr7D 77.926 299 50 13 200 497 165486729 165487012 7.060000e-39 172.0
51 TraesCS2B01G134500 chr7D 97.436 39 1 0 315 353 600224917 600224955 3.430000e-07 67.6
52 TraesCS2B01G134500 chr1D 75.352 426 78 22 4404 4818 354721010 354721419 4.220000e-41 180.0
53 TraesCS2B01G134500 chr3D 91.129 124 10 1 1 124 491992206 491992084 3.290000e-37 167.0
54 TraesCS2B01G134500 chr3D 92.241 116 9 0 9 124 495167438 495167323 1.180000e-36 165.0
55 TraesCS2B01G134500 chr3D 88.793 116 13 0 9 124 50876151 50876266 5.540000e-30 143.0
56 TraesCS2B01G134500 chrUn 91.379 116 10 0 9 124 35417281 35417166 5.500000e-35 159.0
57 TraesCS2B01G134500 chr3A 91.150 113 10 0 12 124 523610144 523610032 2.560000e-33 154.0
58 TraesCS2B01G134500 chr3A 89.655 116 12 0 9 124 634578528 634578413 1.190000e-31 148.0
59 TraesCS2B01G134500 chr6B 89.474 114 12 0 11 124 216348542 216348429 1.540000e-30 145.0
60 TraesCS2B01G134500 chr6B 92.308 39 2 1 4397 4435 686507141 686507178 3.000000e-03 54.7
61 TraesCS2B01G134500 chr4B 85.950 121 15 2 3308 3428 392047289 392047407 1.550000e-25 128.0
62 TraesCS2B01G134500 chr4D 85.246 122 16 2 3308 3429 314396830 314396949 2.010000e-24 124.0
63 TraesCS2B01G134500 chr4D 96.970 33 1 0 4402 4434 9715660 9715628 7.420000e-04 56.5
64 TraesCS2B01G134500 chr1A 90.741 54 2 3 125 178 523599577 523599627 9.540000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G134500 chr2B 100917166 100922471 5305 True 9799.000000 9799 100.000000 1 5306 1 chr2B.!!$R2 5305
1 TraesCS2B01G134500 chr2B 101426752 101428154 1402 True 2178.000000 2178 94.530000 3882 5304 1 chr2B.!!$R3 1422
2 TraesCS2B01G134500 chr2B 101437473 101441614 4141 True 1134.825000 3121 92.574000 1084 5306 4 chr2B.!!$R5 4222
3 TraesCS2B01G134500 chr2B 101414800 101415920 1120 True 434.000000 1024 91.615333 1084 2192 3 chr2B.!!$R4 1108
4 TraesCS2B01G134500 chr2D 64602959 64606709 3750 True 2208.500000 2837 93.568500 1196 5306 2 chr2D.!!$R4 4110
5 TraesCS2B01G134500 chr2D 64614386 64615805 1419 True 911.000000 1572 96.109500 8 1212 2 chr2D.!!$R5 1204
6 TraesCS2B01G134500 chr2D 69215421 69216079 658 False 872.000000 872 91.047000 1554 2192 1 chr2D.!!$F2 638
7 TraesCS2B01G134500 chr2D 68862905 68866244 3339 True 817.633333 1395 91.848333 1442 4268 3 chr2D.!!$R6 2826
8 TraesCS2B01G134500 chr2D 36773197 36773813 616 False 532.000000 532 82.532000 431 1044 1 chr2D.!!$F1 613
9 TraesCS2B01G134500 chr2A 65696684 65700257 3573 True 1280.333333 2239 89.990333 1231 5305 3 chr2A.!!$R2 4074
10 TraesCS2B01G134500 chr2A 653002690 653003616 926 False 1013.000000 1013 86.475000 123 1053 1 chr2A.!!$F2 930
11 TraesCS2B01G134500 chr5B 109091652 109092581 929 False 1170.000000 1170 89.412000 123 1053 1 chr5B.!!$F1 930
12 TraesCS2B01G134500 chr4A 652843498 652844409 911 True 782.000000 782 82.246000 123 1052 1 chr4A.!!$R2 929
13 TraesCS2B01G134500 chr7B 376770157 376770859 702 True 628.000000 628 82.889000 337 1045 1 chr7B.!!$R1 708
14 TraesCS2B01G134500 chr1B 547361375 547361988 613 False 617.000000 617 84.927000 435 1047 1 chr1B.!!$F2 612
15 TraesCS2B01G134500 chr1B 610975868 610976770 902 False 608.000000 608 79.325000 123 1053 1 chr1B.!!$F3 930
16 TraesCS2B01G134500 chr5A 60097116 60097997 881 False 366.000000 366 75.000000 4404 5304 1 chr5A.!!$F1 900

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
415 441 0.957395 CGAGCAAATCAGCCACCACT 60.957 55.000 0.0 0.0 34.23 4.00 F
973 1015 1.213926 GCTGGGACCTTGATCTTCCAT 59.786 52.381 0.0 0.0 0.00 3.41 F
2471 3155 0.179176 GCGATGTGCGTAAAATGCCA 60.179 50.000 0.0 0.0 43.41 4.92 F
2723 3407 0.040425 AACACGTTCTTGCGGATTGC 60.040 50.000 0.0 0.0 46.70 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2229 2913 0.618458 AGCCGCTCCAAAATAGGACA 59.382 50.0 0.0 0.0 33.19 4.02 R
2704 3388 0.040425 GCAATCCGCAAGAACGTGTT 60.040 50.0 0.0 0.0 41.79 3.32 R
3494 5399 0.251354 GCAGGAGAAGATGGTGCTGA 59.749 55.0 0.0 0.0 34.22 4.26 R
4651 6584 0.182775 GGGTGGCGGATTTAGGTCAT 59.817 55.0 0.0 0.0 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 8.758633 AATTGAATGAGAGCTTTGAGAAATTG 57.241 30.769 0.00 0.00 0.00 2.32
48 49 6.309712 TGAGAGCTTTGAGAAATTGTTGAG 57.690 37.500 0.00 0.00 0.00 3.02
275 282 7.348537 AGGGAAATGTTTATAGAACTAGAGGCT 59.651 37.037 0.00 0.00 0.00 4.58
301 317 5.295152 ACTAAGAAACCAAACCGTCTACTG 58.705 41.667 0.00 0.00 0.00 2.74
415 441 0.957395 CGAGCAAATCAGCCACCACT 60.957 55.000 0.00 0.00 34.23 4.00
523 550 2.212327 GCAGTCTTGCCCCTAGCTA 58.788 57.895 0.00 0.00 44.74 3.32
568 597 6.664816 TCCTTTATCTGCAAAATGACCAATCT 59.335 34.615 0.00 0.00 0.00 2.40
689 724 3.329520 TGTAGCAATCCCAACTAACACCT 59.670 43.478 0.00 0.00 0.00 4.00
747 782 2.289010 CCCCAAAACATTCTTGGACTGC 60.289 50.000 3.15 0.00 45.31 4.40
908 947 7.947890 CCCTCTTCAATAAGGAGTCTCTAGTAT 59.052 40.741 0.00 0.00 34.35 2.12
973 1015 1.213926 GCTGGGACCTTGATCTTCCAT 59.786 52.381 0.00 0.00 0.00 3.41
978 1020 5.509498 TGGGACCTTGATCTTCCATAAAAG 58.491 41.667 0.00 0.00 0.00 2.27
980 1022 6.187682 GGGACCTTGATCTTCCATAAAAGAA 58.812 40.000 0.00 0.00 38.69 2.52
981 1023 6.663523 GGGACCTTGATCTTCCATAAAAGAAA 59.336 38.462 0.00 0.00 38.69 2.52
1054 1096 4.202716 ACTGAGAATTTTCCATCAACCCCT 60.203 41.667 0.00 0.00 0.00 4.79
1055 1097 5.015178 ACTGAGAATTTTCCATCAACCCCTA 59.985 40.000 0.00 0.00 0.00 3.53
1056 1098 5.509498 TGAGAATTTTCCATCAACCCCTAG 58.491 41.667 0.00 0.00 0.00 3.02
1057 1099 4.871822 AGAATTTTCCATCAACCCCTAGG 58.128 43.478 0.06 0.06 40.04 3.02
1091 1352 2.268762 TGCTGAATTAGTGTGTGCCA 57.731 45.000 0.00 0.00 0.00 4.92
1440 2068 1.330655 ATCGTTGAGCCCATCGGTCT 61.331 55.000 0.00 0.00 39.84 3.85
1529 2160 2.604174 CCACGTCGCCTTCAACCAC 61.604 63.158 0.00 0.00 0.00 4.16
1532 2163 1.671054 CGTCGCCTTCAACCACCAT 60.671 57.895 0.00 0.00 0.00 3.55
1595 2226 2.680352 TCCTGCCACCCTCTCGAC 60.680 66.667 0.00 0.00 0.00 4.20
2151 2798 1.446907 CACCAAGCTGCAAGAGGTAG 58.553 55.000 1.02 0.00 34.15 3.18
2192 2854 6.599244 TCTTTCGATCCTGAACTATTGCATTT 59.401 34.615 0.00 0.00 0.00 2.32
2193 2855 6.757897 TTCGATCCTGAACTATTGCATTTT 57.242 33.333 0.00 0.00 0.00 1.82
2194 2856 6.363577 TCGATCCTGAACTATTGCATTTTC 57.636 37.500 0.00 0.00 0.00 2.29
2197 2881 7.067372 TCGATCCTGAACTATTGCATTTTCAAT 59.933 33.333 0.00 0.00 39.70 2.57
2205 2889 8.611654 AACTATTGCATTTTCAATTTTGAGCT 57.388 26.923 0.00 0.00 38.61 4.09
2207 2891 8.715088 ACTATTGCATTTTCAATTTTGAGCTTC 58.285 29.630 0.00 0.00 38.61 3.86
2212 2896 7.148289 TGCATTTTCAATTTTGAGCTTCAAACA 60.148 29.630 9.83 4.45 45.03 2.83
2213 2897 7.164662 GCATTTTCAATTTTGAGCTTCAAACAC 59.835 33.333 9.83 0.00 45.03 3.32
2219 2903 7.436080 TCAATTTTGAGCTTCAAACACTGAATC 59.564 33.333 9.83 0.00 45.03 2.52
2220 2904 5.833406 TTTGAGCTTCAAACACTGAATCA 57.167 34.783 7.09 0.00 43.20 2.57
2221 2905 5.833406 TTGAGCTTCAAACACTGAATCAA 57.167 34.783 0.00 1.33 43.20 2.57
2222 2906 6.395426 TTGAGCTTCAAACACTGAATCAAT 57.605 33.333 0.00 0.00 43.20 2.57
2223 2907 7.509141 TTGAGCTTCAAACACTGAATCAATA 57.491 32.000 0.00 0.00 43.20 1.90
2224 2908 7.692460 TGAGCTTCAAACACTGAATCAATAT 57.308 32.000 0.00 0.00 43.20 1.28
2225 2909 8.791327 TGAGCTTCAAACACTGAATCAATATA 57.209 30.769 0.00 0.00 43.20 0.86
2226 2910 9.399797 TGAGCTTCAAACACTGAATCAATATAT 57.600 29.630 0.00 0.00 43.20 0.86
2246 2930 8.964476 ATATATTATGTCCTATTTTGGAGCGG 57.036 34.615 0.00 0.00 36.69 5.52
2247 2931 1.680338 ATGTCCTATTTTGGAGCGGC 58.320 50.000 0.00 0.00 36.69 6.53
2248 2932 0.618458 TGTCCTATTTTGGAGCGGCT 59.382 50.000 0.00 0.00 36.69 5.52
2249 2933 1.004277 TGTCCTATTTTGGAGCGGCTT 59.996 47.619 2.97 0.00 36.69 4.35
2250 2934 2.092323 GTCCTATTTTGGAGCGGCTTT 58.908 47.619 2.97 0.00 36.69 3.51
2251 2935 3.275999 GTCCTATTTTGGAGCGGCTTTA 58.724 45.455 2.97 0.00 36.69 1.85
2252 2936 3.692593 GTCCTATTTTGGAGCGGCTTTAA 59.307 43.478 2.97 0.00 36.69 1.52
2253 2937 4.338400 GTCCTATTTTGGAGCGGCTTTAAT 59.662 41.667 2.97 4.71 36.69 1.40
2254 2938 4.953579 TCCTATTTTGGAGCGGCTTTAATT 59.046 37.500 2.97 0.00 0.00 1.40
2255 2939 5.420739 TCCTATTTTGGAGCGGCTTTAATTT 59.579 36.000 2.97 0.00 0.00 1.82
2256 2940 6.071051 TCCTATTTTGGAGCGGCTTTAATTTT 60.071 34.615 2.97 0.00 0.00 1.82
2257 2941 5.861222 ATTTTGGAGCGGCTTTAATTTTG 57.139 34.783 2.97 0.00 0.00 2.44
2258 2942 4.329462 TTTGGAGCGGCTTTAATTTTGT 57.671 36.364 2.97 0.00 0.00 2.83
2259 2943 3.296322 TGGAGCGGCTTTAATTTTGTG 57.704 42.857 2.97 0.00 0.00 3.33
2260 2944 1.992667 GGAGCGGCTTTAATTTTGTGC 59.007 47.619 2.97 0.00 0.00 4.57
2261 2945 2.352715 GGAGCGGCTTTAATTTTGTGCT 60.353 45.455 2.97 0.00 0.00 4.40
2262 2946 2.663119 GAGCGGCTTTAATTTTGTGCTG 59.337 45.455 2.97 0.00 0.00 4.41
2263 2947 1.726248 GCGGCTTTAATTTTGTGCTGG 59.274 47.619 0.00 0.00 0.00 4.85
2264 2948 1.726248 CGGCTTTAATTTTGTGCTGGC 59.274 47.619 0.00 0.00 0.00 4.85
2265 2949 2.610232 CGGCTTTAATTTTGTGCTGGCT 60.610 45.455 0.00 0.00 0.00 4.75
2266 2950 2.995939 GGCTTTAATTTTGTGCTGGCTC 59.004 45.455 0.00 0.00 0.00 4.70
2267 2951 3.554752 GGCTTTAATTTTGTGCTGGCTCA 60.555 43.478 0.00 0.00 0.00 4.26
2268 2952 3.676646 GCTTTAATTTTGTGCTGGCTCAG 59.323 43.478 0.00 0.00 34.12 3.35
2269 2953 4.559300 GCTTTAATTTTGTGCTGGCTCAGA 60.559 41.667 6.40 0.00 32.44 3.27
2270 2954 4.503741 TTAATTTTGTGCTGGCTCAGAC 57.496 40.909 6.40 3.23 32.44 3.51
2271 2955 1.985473 ATTTTGTGCTGGCTCAGACA 58.015 45.000 6.40 5.32 32.44 3.41
2272 2956 1.761449 TTTTGTGCTGGCTCAGACAA 58.239 45.000 6.40 9.83 33.40 3.18
2273 2957 1.985473 TTTGTGCTGGCTCAGACAAT 58.015 45.000 6.40 0.00 34.37 2.71
2274 2958 2.857186 TTGTGCTGGCTCAGACAATA 57.143 45.000 6.40 0.00 31.78 1.90
2275 2959 3.354948 TTGTGCTGGCTCAGACAATAT 57.645 42.857 6.40 0.00 31.78 1.28
2276 2960 2.635714 TGTGCTGGCTCAGACAATATG 58.364 47.619 6.40 0.00 32.44 1.78
2277 2961 2.026915 TGTGCTGGCTCAGACAATATGT 60.027 45.455 6.40 0.00 32.44 2.29
2278 2962 3.197549 TGTGCTGGCTCAGACAATATGTA 59.802 43.478 6.40 0.00 32.44 2.29
2279 2963 3.557595 GTGCTGGCTCAGACAATATGTAC 59.442 47.826 6.40 0.00 32.44 2.90
2280 2964 2.797156 GCTGGCTCAGACAATATGTACG 59.203 50.000 6.40 0.00 32.44 3.67
2281 2965 3.738281 GCTGGCTCAGACAATATGTACGT 60.738 47.826 6.40 0.00 32.44 3.57
2282 2966 3.780902 TGGCTCAGACAATATGTACGTG 58.219 45.455 0.00 0.00 0.00 4.49
2283 2967 3.123804 GGCTCAGACAATATGTACGTGG 58.876 50.000 0.00 0.00 0.00 4.94
2284 2968 3.430374 GGCTCAGACAATATGTACGTGGT 60.430 47.826 0.00 0.00 0.00 4.16
2285 2969 4.202080 GGCTCAGACAATATGTACGTGGTA 60.202 45.833 0.00 0.00 0.00 3.25
2286 2970 5.509163 GGCTCAGACAATATGTACGTGGTAT 60.509 44.000 0.00 0.00 0.00 2.73
2287 2971 6.294342 GGCTCAGACAATATGTACGTGGTATA 60.294 42.308 0.00 0.00 0.00 1.47
2288 2972 6.802348 GCTCAGACAATATGTACGTGGTATAG 59.198 42.308 0.00 0.00 0.00 1.31
2289 2973 6.675026 TCAGACAATATGTACGTGGTATAGC 58.325 40.000 0.00 0.00 0.00 2.97
2290 2974 5.567915 CAGACAATATGTACGTGGTATAGCG 59.432 44.000 0.00 0.00 0.00 4.26
2291 2975 5.240183 AGACAATATGTACGTGGTATAGCGT 59.760 40.000 0.00 0.00 44.02 5.07
2292 2976 6.427853 AGACAATATGTACGTGGTATAGCGTA 59.572 38.462 0.00 0.00 41.77 4.42
2293 2977 7.120285 AGACAATATGTACGTGGTATAGCGTAT 59.880 37.037 0.00 0.00 43.87 3.06
2294 2978 8.267620 ACAATATGTACGTGGTATAGCGTATA 57.732 34.615 0.00 5.74 43.87 1.47
2295 2979 8.393366 ACAATATGTACGTGGTATAGCGTATAG 58.607 37.037 0.00 0.00 43.87 1.31
2296 2980 8.393366 CAATATGTACGTGGTATAGCGTATAGT 58.607 37.037 0.00 1.81 43.87 2.12
2297 2981 9.599866 AATATGTACGTGGTATAGCGTATAGTA 57.400 33.333 0.00 1.06 43.87 1.82
2298 2982 6.706055 TGTACGTGGTATAGCGTATAGTAC 57.294 41.667 0.00 13.35 43.87 2.73
2299 2983 6.220201 TGTACGTGGTATAGCGTATAGTACA 58.780 40.000 16.42 16.42 43.87 2.90
2300 2984 6.873605 TGTACGTGGTATAGCGTATAGTACAT 59.126 38.462 16.42 0.00 43.87 2.29
2301 2985 6.174451 ACGTGGTATAGCGTATAGTACATG 57.826 41.667 0.00 0.00 39.72 3.21
2302 2986 5.702670 ACGTGGTATAGCGTATAGTACATGT 59.297 40.000 2.69 2.69 39.72 3.21
2303 2987 6.019762 CGTGGTATAGCGTATAGTACATGTG 58.980 44.000 9.11 0.00 0.00 3.21
2304 2988 6.128472 CGTGGTATAGCGTATAGTACATGTGA 60.128 42.308 9.11 0.00 0.00 3.58
2305 2989 7.020010 GTGGTATAGCGTATAGTACATGTGAC 58.980 42.308 9.11 3.04 0.00 3.67
2306 2990 6.149973 TGGTATAGCGTATAGTACATGTGACC 59.850 42.308 9.11 0.00 0.00 4.02
2307 2991 6.149973 GGTATAGCGTATAGTACATGTGACCA 59.850 42.308 9.11 0.00 0.00 4.02
2308 2992 4.303086 AGCGTATAGTACATGTGACCAC 57.697 45.455 9.11 0.00 0.00 4.16
2309 2993 3.067742 AGCGTATAGTACATGTGACCACC 59.932 47.826 9.11 0.00 0.00 4.61
2310 2994 3.067742 GCGTATAGTACATGTGACCACCT 59.932 47.826 9.11 0.00 0.00 4.00
2311 2995 4.441079 GCGTATAGTACATGTGACCACCTT 60.441 45.833 9.11 0.00 0.00 3.50
2312 2996 5.657474 CGTATAGTACATGTGACCACCTTT 58.343 41.667 9.11 0.00 0.00 3.11
2313 2997 5.518847 CGTATAGTACATGTGACCACCTTTG 59.481 44.000 9.11 0.00 0.00 2.77
2314 2998 2.504367 AGTACATGTGACCACCTTTGC 58.496 47.619 9.11 0.00 0.00 3.68
2315 2999 2.158682 AGTACATGTGACCACCTTTGCA 60.159 45.455 9.11 0.00 0.00 4.08
2316 3000 1.999648 ACATGTGACCACCTTTGCAT 58.000 45.000 0.00 0.00 0.00 3.96
2317 3001 3.153369 ACATGTGACCACCTTTGCATA 57.847 42.857 0.00 0.00 0.00 3.14
2318 3002 3.084039 ACATGTGACCACCTTTGCATAG 58.916 45.455 0.00 0.00 0.00 2.23
2319 3003 3.244875 ACATGTGACCACCTTTGCATAGA 60.245 43.478 5.65 0.00 0.00 1.98
2320 3004 3.500448 TGTGACCACCTTTGCATAGAA 57.500 42.857 5.65 0.00 0.00 2.10
2321 3005 3.826524 TGTGACCACCTTTGCATAGAAA 58.173 40.909 5.65 0.00 0.00 2.52
2322 3006 4.211125 TGTGACCACCTTTGCATAGAAAA 58.789 39.130 5.65 0.00 0.00 2.29
2323 3007 4.646945 TGTGACCACCTTTGCATAGAAAAA 59.353 37.500 5.65 0.00 0.00 1.94
2324 3008 5.304101 TGTGACCACCTTTGCATAGAAAAAT 59.696 36.000 5.65 0.00 0.00 1.82
2325 3009 6.491745 TGTGACCACCTTTGCATAGAAAAATA 59.508 34.615 5.65 0.00 0.00 1.40
2326 3010 7.029563 GTGACCACCTTTGCATAGAAAAATAG 58.970 38.462 5.65 0.00 0.00 1.73
2327 3011 6.945435 TGACCACCTTTGCATAGAAAAATAGA 59.055 34.615 5.65 0.00 0.00 1.98
2328 3012 7.450014 TGACCACCTTTGCATAGAAAAATAGAA 59.550 33.333 5.65 0.00 0.00 2.10
2329 3013 8.189119 ACCACCTTTGCATAGAAAAATAGAAA 57.811 30.769 5.65 0.00 0.00 2.52
2330 3014 8.646900 ACCACCTTTGCATAGAAAAATAGAAAA 58.353 29.630 5.65 0.00 0.00 2.29
2331 3015 8.925700 CCACCTTTGCATAGAAAAATAGAAAAC 58.074 33.333 5.65 0.00 0.00 2.43
2332 3016 9.696917 CACCTTTGCATAGAAAAATAGAAAACT 57.303 29.630 5.65 0.00 0.00 2.66
2333 3017 9.914131 ACCTTTGCATAGAAAAATAGAAAACTC 57.086 29.630 5.65 0.00 0.00 3.01
2334 3018 9.358872 CCTTTGCATAGAAAAATAGAAAACTCC 57.641 33.333 5.65 0.00 0.00 3.85
2335 3019 9.358872 CTTTGCATAGAAAAATAGAAAACTCCC 57.641 33.333 0.00 0.00 0.00 4.30
2336 3020 7.404671 TGCATAGAAAAATAGAAAACTCCCC 57.595 36.000 0.00 0.00 0.00 4.81
2337 3021 6.379988 TGCATAGAAAAATAGAAAACTCCCCC 59.620 38.462 0.00 0.00 0.00 5.40
2338 3022 6.379988 GCATAGAAAAATAGAAAACTCCCCCA 59.620 38.462 0.00 0.00 0.00 4.96
2339 3023 7.093509 GCATAGAAAAATAGAAAACTCCCCCAA 60.094 37.037 0.00 0.00 0.00 4.12
2340 3024 8.811994 CATAGAAAAATAGAAAACTCCCCCAAA 58.188 33.333 0.00 0.00 0.00 3.28
2341 3025 7.684317 AGAAAAATAGAAAACTCCCCCAAAA 57.316 32.000 0.00 0.00 0.00 2.44
2342 3026 8.096621 AGAAAAATAGAAAACTCCCCCAAAAA 57.903 30.769 0.00 0.00 0.00 1.94
2370 3054 8.737168 AGCACAGAATAGTATAAATTTGCAGA 57.263 30.769 0.00 0.00 0.00 4.26
2371 3055 9.347240 AGCACAGAATAGTATAAATTTGCAGAT 57.653 29.630 0.00 0.00 0.00 2.90
2386 3070 9.783081 AAATTTGCAGATAAGTTTGGAAAATCT 57.217 25.926 0.00 0.00 37.98 2.40
2387 3071 8.767478 ATTTGCAGATAAGTTTGGAAAATCTG 57.233 30.769 6.68 6.68 44.07 2.90
2398 3082 8.648557 AGTTTGGAAAATCTGAAGCTTTTAAC 57.351 30.769 0.00 0.00 0.00 2.01
2405 3089 7.914537 AAATCTGAAGCTTTTAACGAACTTG 57.085 32.000 0.00 0.00 0.00 3.16
2408 3092 5.587043 TCTGAAGCTTTTAACGAACTTGGAA 59.413 36.000 0.00 0.00 0.00 3.53
2411 3095 7.262048 TGAAGCTTTTAACGAACTTGGAAAAT 58.738 30.769 0.00 0.00 0.00 1.82
2444 3128 7.180229 TGAAAAGACAGATCCACTACTCCATAA 59.820 37.037 0.00 0.00 0.00 1.90
2448 3132 6.841229 AGACAGATCCACTACTCCATAAATGA 59.159 38.462 0.00 0.00 0.00 2.57
2449 3133 7.512058 AGACAGATCCACTACTCCATAAATGAT 59.488 37.037 0.00 0.00 0.00 2.45
2450 3134 8.038862 ACAGATCCACTACTCCATAAATGATT 57.961 34.615 0.00 0.00 0.00 2.57
2451 3135 8.497745 ACAGATCCACTACTCCATAAATGATTT 58.502 33.333 0.00 0.00 0.00 2.17
2452 3136 8.781196 CAGATCCACTACTCCATAAATGATTTG 58.219 37.037 0.00 0.00 0.00 2.32
2453 3137 6.942532 TCCACTACTCCATAAATGATTTGC 57.057 37.500 0.00 0.00 0.00 3.68
2454 3138 5.527214 TCCACTACTCCATAAATGATTTGCG 59.473 40.000 0.00 0.00 0.00 4.85
2455 3139 5.527214 CCACTACTCCATAAATGATTTGCGA 59.473 40.000 0.00 0.00 0.00 5.10
2456 3140 6.205464 CCACTACTCCATAAATGATTTGCGAT 59.795 38.462 0.00 0.00 0.00 4.58
2457 3141 7.073883 CACTACTCCATAAATGATTTGCGATG 58.926 38.462 0.00 0.00 0.00 3.84
2458 3142 6.767902 ACTACTCCATAAATGATTTGCGATGT 59.232 34.615 0.00 0.00 0.00 3.06
2459 3143 5.824429 ACTCCATAAATGATTTGCGATGTG 58.176 37.500 0.00 0.00 0.00 3.21
2460 3144 4.609947 TCCATAAATGATTTGCGATGTGC 58.390 39.130 0.00 0.00 46.70 4.57
2470 3154 2.565868 GCGATGTGCGTAAAATGCC 58.434 52.632 0.00 0.00 43.41 4.40
2471 3155 0.179176 GCGATGTGCGTAAAATGCCA 60.179 50.000 0.00 0.00 43.41 4.92
2472 3156 1.730772 GCGATGTGCGTAAAATGCCAA 60.731 47.619 0.00 0.00 43.41 4.52
2473 3157 2.796304 CGATGTGCGTAAAATGCCAAT 58.204 42.857 0.00 0.00 34.64 3.16
2474 3158 3.790456 GCGATGTGCGTAAAATGCCAATA 60.790 43.478 0.00 0.00 43.41 1.90
2475 3159 3.968096 CGATGTGCGTAAAATGCCAATAG 59.032 43.478 0.00 0.00 34.64 1.73
2476 3160 4.495679 CGATGTGCGTAAAATGCCAATAGT 60.496 41.667 0.00 0.00 34.64 2.12
2477 3161 4.090138 TGTGCGTAAAATGCCAATAGTG 57.910 40.909 0.00 0.00 0.00 2.74
2478 3162 2.851824 GTGCGTAAAATGCCAATAGTGC 59.148 45.455 0.00 0.00 0.00 4.40
2479 3163 2.159310 TGCGTAAAATGCCAATAGTGCC 60.159 45.455 0.00 0.00 0.00 5.01
2480 3164 2.099098 GCGTAAAATGCCAATAGTGCCT 59.901 45.455 0.00 0.00 0.00 4.75
2481 3165 3.694734 CGTAAAATGCCAATAGTGCCTG 58.305 45.455 0.00 0.00 0.00 4.85
2482 3166 3.376859 CGTAAAATGCCAATAGTGCCTGA 59.623 43.478 0.00 0.00 0.00 3.86
2483 3167 4.496341 CGTAAAATGCCAATAGTGCCTGAG 60.496 45.833 0.00 0.00 0.00 3.35
2484 3168 1.396653 AATGCCAATAGTGCCTGAGC 58.603 50.000 0.00 0.00 40.48 4.26
2485 3169 0.549950 ATGCCAATAGTGCCTGAGCT 59.450 50.000 0.00 0.00 40.80 4.09
2486 3170 1.203237 TGCCAATAGTGCCTGAGCTA 58.797 50.000 0.00 0.00 40.80 3.32
2487 3171 1.770658 TGCCAATAGTGCCTGAGCTAT 59.229 47.619 0.00 0.00 40.80 2.97
2488 3172 2.972021 TGCCAATAGTGCCTGAGCTATA 59.028 45.455 0.00 0.00 40.80 1.31
2489 3173 3.007290 TGCCAATAGTGCCTGAGCTATAG 59.993 47.826 0.00 0.00 40.80 1.31
2490 3174 3.618507 GCCAATAGTGCCTGAGCTATAGG 60.619 52.174 11.32 11.32 40.80 2.57
2491 3175 3.055530 CCAATAGTGCCTGAGCTATAGGG 60.056 52.174 16.09 4.41 40.80 3.53
2492 3176 3.834813 CAATAGTGCCTGAGCTATAGGGA 59.165 47.826 16.09 11.67 40.80 4.20
2493 3177 2.008242 AGTGCCTGAGCTATAGGGAG 57.992 55.000 16.09 0.00 36.25 4.30
2494 3178 0.320050 GTGCCTGAGCTATAGGGAGC 59.680 60.000 16.09 6.70 43.19 4.70
2504 3188 3.793559 GCTATAGGGAGCTCGTTTTTCA 58.206 45.455 7.83 0.00 39.50 2.69
2505 3189 4.189231 GCTATAGGGAGCTCGTTTTTCAA 58.811 43.478 7.83 0.00 39.50 2.69
2506 3190 4.634443 GCTATAGGGAGCTCGTTTTTCAAA 59.366 41.667 7.83 0.00 39.50 2.69
2507 3191 5.297029 GCTATAGGGAGCTCGTTTTTCAAAT 59.703 40.000 7.83 0.00 39.50 2.32
2508 3192 6.183360 GCTATAGGGAGCTCGTTTTTCAAATT 60.183 38.462 7.83 0.00 39.50 1.82
2509 3193 4.505313 AGGGAGCTCGTTTTTCAAATTC 57.495 40.909 7.83 0.00 0.00 2.17
2510 3194 3.888930 AGGGAGCTCGTTTTTCAAATTCA 59.111 39.130 7.83 0.00 0.00 2.57
2511 3195 4.524328 AGGGAGCTCGTTTTTCAAATTCAT 59.476 37.500 7.83 0.00 0.00 2.57
2512 3196 5.710099 AGGGAGCTCGTTTTTCAAATTCATA 59.290 36.000 7.83 0.00 0.00 2.15
2513 3197 6.378280 AGGGAGCTCGTTTTTCAAATTCATAT 59.622 34.615 7.83 0.00 0.00 1.78
2514 3198 7.035612 GGGAGCTCGTTTTTCAAATTCATATT 58.964 34.615 7.83 0.00 0.00 1.28
2515 3199 7.545615 GGGAGCTCGTTTTTCAAATTCATATTT 59.454 33.333 7.83 0.00 34.29 1.40
2516 3200 8.925700 GGAGCTCGTTTTTCAAATTCATATTTT 58.074 29.630 7.83 0.00 31.63 1.82
2525 3209 7.903995 TTCAAATTCATATTTTTCACAGCCC 57.096 32.000 0.00 0.00 31.63 5.19
2526 3210 7.002250 TCAAATTCATATTTTTCACAGCCCA 57.998 32.000 0.00 0.00 31.63 5.36
2527 3211 7.448420 TCAAATTCATATTTTTCACAGCCCAA 58.552 30.769 0.00 0.00 31.63 4.12
2528 3212 7.935755 TCAAATTCATATTTTTCACAGCCCAAA 59.064 29.630 0.00 0.00 31.63 3.28
2529 3213 8.566260 CAAATTCATATTTTTCACAGCCCAAAA 58.434 29.630 0.00 0.00 31.63 2.44
2530 3214 8.688747 AATTCATATTTTTCACAGCCCAAAAA 57.311 26.923 0.00 0.00 36.25 1.94
2531 3215 8.866970 ATTCATATTTTTCACAGCCCAAAAAT 57.133 26.923 7.35 7.35 42.29 1.82
2532 3216 8.688747 TTCATATTTTTCACAGCCCAAAAATT 57.311 26.923 7.47 0.06 40.80 1.82
2533 3217 8.688747 TCATATTTTTCACAGCCCAAAAATTT 57.311 26.923 7.47 0.00 40.80 1.82
2534 3218 8.782144 TCATATTTTTCACAGCCCAAAAATTTC 58.218 29.630 7.47 0.00 40.80 2.17
2535 3219 5.476752 TTTTTCACAGCCCAAAAATTTCG 57.523 34.783 0.00 0.00 0.00 3.46
2536 3220 4.392921 TTTCACAGCCCAAAAATTTCGA 57.607 36.364 0.00 0.00 0.00 3.71
2537 3221 4.599047 TTCACAGCCCAAAAATTTCGAT 57.401 36.364 0.00 0.00 0.00 3.59
2538 3222 4.599047 TCACAGCCCAAAAATTTCGATT 57.401 36.364 0.00 0.00 0.00 3.34
2539 3223 4.954875 TCACAGCCCAAAAATTTCGATTT 58.045 34.783 0.00 0.00 0.00 2.17
2540 3224 5.363939 TCACAGCCCAAAAATTTCGATTTT 58.636 33.333 0.00 0.00 35.46 1.82
2541 3225 6.516718 TCACAGCCCAAAAATTTCGATTTTA 58.483 32.000 0.00 0.00 33.77 1.52
2542 3226 7.158021 TCACAGCCCAAAAATTTCGATTTTAT 58.842 30.769 0.00 0.00 33.77 1.40
2543 3227 7.659390 TCACAGCCCAAAAATTTCGATTTTATT 59.341 29.630 0.00 0.00 33.77 1.40
2544 3228 8.288913 CACAGCCCAAAAATTTCGATTTTATTT 58.711 29.630 0.00 0.00 33.77 1.40
2545 3229 8.288913 ACAGCCCAAAAATTTCGATTTTATTTG 58.711 29.630 0.00 1.85 33.77 2.32
2546 3230 8.288913 CAGCCCAAAAATTTCGATTTTATTTGT 58.711 29.630 0.00 0.00 33.77 2.83
2547 3231 8.288913 AGCCCAAAAATTTCGATTTTATTTGTG 58.711 29.630 0.00 2.78 33.77 3.33
2548 3232 7.536964 GCCCAAAAATTTCGATTTTATTTGTGG 59.463 33.333 17.04 17.04 42.46 4.17
2549 3233 8.778358 CCCAAAAATTTCGATTTTATTTGTGGA 58.222 29.630 21.60 0.00 44.23 4.02
2550 3234 9.592720 CCAAAAATTTCGATTTTATTTGTGGAC 57.407 29.630 18.17 0.00 44.23 4.02
2553 3237 8.879342 AAATTTCGATTTTATTTGTGGACACA 57.121 26.923 0.13 0.13 39.98 3.72
2572 3256 4.163552 CACACTACCACATGTGTACTACG 58.836 47.826 23.79 10.21 44.43 3.51
2573 3257 3.176708 CACTACCACATGTGTACTACGC 58.823 50.000 23.79 0.00 0.00 4.42
2574 3258 2.821378 ACTACCACATGTGTACTACGCA 59.179 45.455 23.79 4.93 43.36 5.24
2584 3268 6.978343 ATGTGTACTACGCATGTGTAAAAT 57.022 33.333 19.12 10.70 46.45 1.82
2585 3269 6.788684 TGTGTACTACGCATGTGTAAAATT 57.211 33.333 19.12 7.46 33.08 1.82
2586 3270 7.192148 TGTGTACTACGCATGTGTAAAATTT 57.808 32.000 19.12 5.30 33.08 1.82
2587 3271 7.292292 TGTGTACTACGCATGTGTAAAATTTC 58.708 34.615 19.12 9.47 33.08 2.17
2588 3272 7.041984 TGTGTACTACGCATGTGTAAAATTTCA 60.042 33.333 19.12 11.51 33.08 2.69
2589 3273 7.267600 GTGTACTACGCATGTGTAAAATTTCAC 59.732 37.037 19.12 16.27 35.43 3.18
2590 3274 6.307031 ACTACGCATGTGTAAAATTTCACA 57.693 33.333 19.12 13.31 46.23 3.58
2591 3275 6.370593 ACTACGCATGTGTAAAATTTCACAG 58.629 36.000 19.12 8.46 45.56 3.66
2592 3276 3.980775 ACGCATGTGTAAAATTTCACAGC 59.019 39.130 10.90 15.80 45.56 4.40
2593 3277 3.980134 CGCATGTGTAAAATTTCACAGCA 59.020 39.130 20.81 12.97 45.56 4.41
2594 3278 4.143556 CGCATGTGTAAAATTTCACAGCAC 60.144 41.667 20.81 13.86 45.56 4.40
2595 3279 4.984161 GCATGTGTAAAATTTCACAGCACT 59.016 37.500 15.43 0.27 45.56 4.40
2596 3280 6.148948 GCATGTGTAAAATTTCACAGCACTA 58.851 36.000 15.43 0.00 45.56 2.74
2597 3281 6.808212 GCATGTGTAAAATTTCACAGCACTAT 59.192 34.615 15.43 0.00 45.56 2.12
2598 3282 7.967854 GCATGTGTAAAATTTCACAGCACTATA 59.032 33.333 15.43 0.00 45.56 1.31
2599 3283 9.277565 CATGTGTAAAATTTCACAGCACTATAC 57.722 33.333 15.43 1.91 45.56 1.47
2600 3284 8.615878 TGTGTAAAATTTCACAGCACTATACT 57.384 30.769 8.26 0.00 39.23 2.12
2601 3285 9.062524 TGTGTAAAATTTCACAGCACTATACTT 57.937 29.630 8.26 0.00 39.23 2.24
2602 3286 9.543018 GTGTAAAATTTCACAGCACTATACTTC 57.457 33.333 0.00 0.00 35.04 3.01
2603 3287 9.278978 TGTAAAATTTCACAGCACTATACTTCA 57.721 29.630 0.00 0.00 0.00 3.02
2604 3288 9.543018 GTAAAATTTCACAGCACTATACTTCAC 57.457 33.333 0.00 0.00 0.00 3.18
2605 3289 7.744087 AAATTTCACAGCACTATACTTCACA 57.256 32.000 0.00 0.00 0.00 3.58
2606 3290 6.727824 ATTTCACAGCACTATACTTCACAC 57.272 37.500 0.00 0.00 0.00 3.82
2607 3291 3.833442 TCACAGCACTATACTTCACACG 58.167 45.455 0.00 0.00 0.00 4.49
2608 3292 3.254903 TCACAGCACTATACTTCACACGT 59.745 43.478 0.00 0.00 0.00 4.49
2609 3293 3.364920 CACAGCACTATACTTCACACGTG 59.635 47.826 15.48 15.48 0.00 4.49
2610 3294 2.923655 CAGCACTATACTTCACACGTGG 59.076 50.000 21.57 9.11 0.00 4.94
2611 3295 1.659098 GCACTATACTTCACACGTGGC 59.341 52.381 21.57 4.84 0.00 5.01
2612 3296 1.917955 CACTATACTTCACACGTGGCG 59.082 52.381 21.57 10.79 0.00 5.69
2613 3297 1.542915 ACTATACTTCACACGTGGCGT 59.457 47.619 21.57 12.74 42.36 5.68
2614 3298 2.749076 ACTATACTTCACACGTGGCGTA 59.251 45.455 21.57 14.43 38.32 4.42
2615 3299 2.728690 ATACTTCACACGTGGCGTAA 57.271 45.000 21.57 7.19 38.32 3.18
2616 3300 2.505628 TACTTCACACGTGGCGTAAA 57.494 45.000 21.57 5.44 38.32 2.01
2617 3301 1.654317 ACTTCACACGTGGCGTAAAA 58.346 45.000 21.57 3.70 38.32 1.52
2618 3302 2.008329 ACTTCACACGTGGCGTAAAAA 58.992 42.857 21.57 2.33 38.32 1.94
2646 3330 8.212317 AGACAAATATGCATTTTTAAATGGGC 57.788 30.769 13.74 5.04 44.54 5.36
2647 3331 7.282901 AGACAAATATGCATTTTTAAATGGGCC 59.717 33.333 13.74 0.00 44.54 5.80
2648 3332 7.118060 ACAAATATGCATTTTTAAATGGGCCT 58.882 30.769 13.74 0.00 44.54 5.19
2649 3333 7.614974 ACAAATATGCATTTTTAAATGGGCCTT 59.385 29.630 13.74 0.00 44.54 4.35
2650 3334 8.468399 CAAATATGCATTTTTAAATGGGCCTTT 58.532 29.630 13.74 0.76 44.54 3.11
2651 3335 8.592529 AATATGCATTTTTAAATGGGCCTTTT 57.407 26.923 19.77 19.77 44.54 2.27
2652 3336 6.914654 ATGCATTTTTAAATGGGCCTTTTT 57.085 29.167 20.86 14.79 44.54 1.94
2653 3337 9.692325 ATATGCATTTTTAAATGGGCCTTTTTA 57.308 25.926 20.86 13.86 44.54 1.52
2654 3338 8.592529 ATGCATTTTTAAATGGGCCTTTTTAT 57.407 26.923 20.86 8.56 44.54 1.40
2655 3339 8.414629 TGCATTTTTAAATGGGCCTTTTTATT 57.585 26.923 20.86 1.38 44.54 1.40
2656 3340 8.864087 TGCATTTTTAAATGGGCCTTTTTATTT 58.136 25.926 20.86 12.40 44.54 1.40
2657 3341 9.703892 GCATTTTTAAATGGGCCTTTTTATTTT 57.296 25.926 20.86 0.30 44.54 1.82
2663 3347 7.652524 AAATGGGCCTTTTTATTTTTGTTGT 57.347 28.000 11.35 0.00 0.00 3.32
2664 3348 7.652524 AATGGGCCTTTTTATTTTTGTTGTT 57.347 28.000 4.53 0.00 0.00 2.83
2665 3349 6.442513 TGGGCCTTTTTATTTTTGTTGTTG 57.557 33.333 4.53 0.00 0.00 3.33
2666 3350 6.180472 TGGGCCTTTTTATTTTTGTTGTTGA 58.820 32.000 4.53 0.00 0.00 3.18
2667 3351 6.317391 TGGGCCTTTTTATTTTTGTTGTTGAG 59.683 34.615 4.53 0.00 0.00 3.02
2668 3352 6.198687 GGCCTTTTTATTTTTGTTGTTGAGC 58.801 36.000 0.00 0.00 0.00 4.26
2669 3353 6.038161 GGCCTTTTTATTTTTGTTGTTGAGCT 59.962 34.615 0.00 0.00 0.00 4.09
2670 3354 6.906678 GCCTTTTTATTTTTGTTGTTGAGCTG 59.093 34.615 0.00 0.00 0.00 4.24
2671 3355 7.408910 CCTTTTTATTTTTGTTGTTGAGCTGG 58.591 34.615 0.00 0.00 0.00 4.85
2672 3356 7.279758 CCTTTTTATTTTTGTTGTTGAGCTGGA 59.720 33.333 0.00 0.00 0.00 3.86
2673 3357 8.729805 TTTTTATTTTTGTTGTTGAGCTGGAT 57.270 26.923 0.00 0.00 0.00 3.41
2674 3358 8.729805 TTTTATTTTTGTTGTTGAGCTGGATT 57.270 26.923 0.00 0.00 0.00 3.01
2675 3359 8.729805 TTTATTTTTGTTGTTGAGCTGGATTT 57.270 26.923 0.00 0.00 0.00 2.17
2676 3360 8.729805 TTATTTTTGTTGTTGAGCTGGATTTT 57.270 26.923 0.00 0.00 0.00 1.82
2677 3361 7.628769 ATTTTTGTTGTTGAGCTGGATTTTT 57.371 28.000 0.00 0.00 0.00 1.94
2703 3387 9.660180 TTTTTACAGCCTACAAAGAACATTTTT 57.340 25.926 0.00 0.00 0.00 1.94
2706 3390 9.738832 TTACAGCCTACAAAGAACATTTTTAAC 57.261 29.630 0.00 0.00 0.00 2.01
2707 3391 7.777095 ACAGCCTACAAAGAACATTTTTAACA 58.223 30.769 0.00 0.00 0.00 2.41
2708 3392 7.704899 ACAGCCTACAAAGAACATTTTTAACAC 59.295 33.333 0.00 0.00 0.00 3.32
2709 3393 6.915843 AGCCTACAAAGAACATTTTTAACACG 59.084 34.615 0.00 0.00 0.00 4.49
2710 3394 6.693978 GCCTACAAAGAACATTTTTAACACGT 59.306 34.615 0.00 0.00 0.00 4.49
2711 3395 7.221259 GCCTACAAAGAACATTTTTAACACGTT 59.779 33.333 0.00 0.00 0.00 3.99
2712 3396 8.739461 CCTACAAAGAACATTTTTAACACGTTC 58.261 33.333 0.00 0.00 36.95 3.95
2713 3397 9.498307 CTACAAAGAACATTTTTAACACGTTCT 57.502 29.630 0.00 0.00 46.14 3.01
2716 3400 6.806120 AGAACATTTTTAACACGTTCTTGC 57.194 33.333 0.00 0.00 42.69 4.01
2717 3401 5.454232 AGAACATTTTTAACACGTTCTTGCG 59.546 36.000 0.00 0.00 42.69 4.85
2718 3402 4.039032 ACATTTTTAACACGTTCTTGCGG 58.961 39.130 0.00 0.00 35.98 5.69
2719 3403 4.201930 ACATTTTTAACACGTTCTTGCGGA 60.202 37.500 0.00 0.00 35.98 5.54
2720 3404 4.555348 TTTTTAACACGTTCTTGCGGAT 57.445 36.364 0.00 0.00 35.98 4.18
2721 3405 4.555348 TTTTAACACGTTCTTGCGGATT 57.445 36.364 0.00 0.00 35.98 3.01
2722 3406 3.529634 TTAACACGTTCTTGCGGATTG 57.470 42.857 0.00 0.00 35.98 2.67
2723 3407 0.040425 AACACGTTCTTGCGGATTGC 60.040 50.000 0.00 0.00 46.70 3.56
2738 3422 6.621737 GCGGATTGCATATATGTTTTCATG 57.378 37.500 14.14 6.39 45.45 3.07
2739 3423 5.574055 GCGGATTGCATATATGTTTTCATGG 59.426 40.000 14.14 4.06 45.45 3.66
2740 3424 6.570186 GCGGATTGCATATATGTTTTCATGGA 60.570 38.462 14.14 0.00 45.45 3.41
2741 3425 7.541162 CGGATTGCATATATGTTTTCATGGAT 58.459 34.615 14.14 0.00 41.09 3.41
2742 3426 8.030692 CGGATTGCATATATGTTTTCATGGATT 58.969 33.333 14.14 0.00 41.09 3.01
2743 3427 9.715121 GGATTGCATATATGTTTTCATGGATTT 57.285 29.630 14.14 0.00 41.09 2.17
2830 3525 6.531503 AGTCAATCTAGAAACCAATCTCGA 57.468 37.500 0.00 0.00 0.00 4.04
2838 3534 8.703604 TCTAGAAACCAATCTCGAAATTAGTG 57.296 34.615 0.00 0.00 0.00 2.74
2842 3538 7.607991 AGAAACCAATCTCGAAATTAGTGACAT 59.392 33.333 0.00 0.00 0.00 3.06
2895 3624 9.753674 TCAAACAGAAACTTATATTTCCCTCAT 57.246 29.630 0.00 0.00 39.05 2.90
2899 3628 9.190317 ACAGAAACTTATATTTCCCTCATTTCC 57.810 33.333 0.00 0.00 39.05 3.13
2900 3629 9.413734 CAGAAACTTATATTTCCCTCATTTCCT 57.586 33.333 0.00 0.00 39.05 3.36
2970 4424 3.636764 AGAAGGCGAGTCAACCAAAATTT 59.363 39.130 2.24 0.00 0.00 1.82
2971 4425 3.643159 AGGCGAGTCAACCAAAATTTC 57.357 42.857 2.24 0.00 0.00 2.17
2972 4426 3.222603 AGGCGAGTCAACCAAAATTTCT 58.777 40.909 2.24 0.00 0.00 2.52
2973 4427 3.636764 AGGCGAGTCAACCAAAATTTCTT 59.363 39.130 2.24 0.00 0.00 2.52
2974 4428 4.825085 AGGCGAGTCAACCAAAATTTCTTA 59.175 37.500 2.24 0.00 0.00 2.10
2976 4430 6.015434 AGGCGAGTCAACCAAAATTTCTTATT 60.015 34.615 2.24 0.00 0.00 1.40
2977 4431 6.089417 GGCGAGTCAACCAAAATTTCTTATTG 59.911 38.462 0.00 0.00 0.00 1.90
3014 4804 8.699283 ATAACTAAATAAGTGACGGACTTGAC 57.301 34.615 11.28 0.00 45.05 3.18
3015 4805 6.342338 ACTAAATAAGTGACGGACTTGACT 57.658 37.500 11.28 0.00 45.05 3.41
3016 4806 7.458409 ACTAAATAAGTGACGGACTTGACTA 57.542 36.000 11.28 1.37 45.05 2.59
3017 4807 7.889469 ACTAAATAAGTGACGGACTTGACTAA 58.111 34.615 11.28 0.00 45.05 2.24
3018 4808 8.529476 ACTAAATAAGTGACGGACTTGACTAAT 58.471 33.333 11.28 0.00 45.05 1.73
3019 4809 9.367444 CTAAATAAGTGACGGACTTGACTAATT 57.633 33.333 11.28 1.96 45.05 1.40
3020 4810 8.617290 AAATAAGTGACGGACTTGACTAATTT 57.383 30.769 11.28 6.82 45.05 1.82
3021 4811 5.924475 AAGTGACGGACTTGACTAATTTG 57.076 39.130 1.60 0.00 43.71 2.32
3022 4812 4.957296 AGTGACGGACTTGACTAATTTGT 58.043 39.130 0.00 0.00 0.00 2.83
3023 4813 5.365619 AGTGACGGACTTGACTAATTTGTT 58.634 37.500 0.00 0.00 0.00 2.83
3024 4814 5.820947 AGTGACGGACTTGACTAATTTGTTT 59.179 36.000 0.00 0.00 0.00 2.83
3025 4815 6.317893 AGTGACGGACTTGACTAATTTGTTTT 59.682 34.615 0.00 0.00 0.00 2.43
3026 4816 6.970613 GTGACGGACTTGACTAATTTGTTTTT 59.029 34.615 0.00 0.00 0.00 1.94
3027 4817 8.124199 GTGACGGACTTGACTAATTTGTTTTTA 58.876 33.333 0.00 0.00 0.00 1.52
3028 4818 8.842280 TGACGGACTTGACTAATTTGTTTTTAT 58.158 29.630 0.00 0.00 0.00 1.40
3029 4819 9.326339 GACGGACTTGACTAATTTGTTTTTATC 57.674 33.333 0.00 0.00 0.00 1.75
3030 4820 9.063615 ACGGACTTGACTAATTTGTTTTTATCT 57.936 29.630 0.00 0.00 0.00 1.98
3031 4821 9.893305 CGGACTTGACTAATTTGTTTTTATCTT 57.107 29.630 0.00 0.00 0.00 2.40
3054 4844 3.896122 ACATGCAAATTAACGTGTCACC 58.104 40.909 0.00 0.00 30.21 4.02
3056 4846 4.037446 ACATGCAAATTAACGTGTCACCTT 59.963 37.500 0.00 0.00 30.21 3.50
3057 4847 5.239744 ACATGCAAATTAACGTGTCACCTTA 59.760 36.000 0.00 0.00 30.21 2.69
3080 4870 8.583810 TTAATATGTACCTACGCATGAGAAAC 57.416 34.615 2.50 0.00 0.00 2.78
3083 4873 4.491676 TGTACCTACGCATGAGAAACTTC 58.508 43.478 2.50 0.00 0.00 3.01
3088 4878 6.407202 ACCTACGCATGAGAAACTTCTTATT 58.593 36.000 2.50 0.00 37.73 1.40
3116 4906 4.537135 TGCTACTCCTGGAGTACTTTTG 57.463 45.455 28.36 20.09 41.51 2.44
3246 5084 2.158711 ACACGGTCGGGTATCATCTAGA 60.159 50.000 0.00 0.00 0.00 2.43
3308 5213 3.003689 CACATGTTGGTGTTCTTGACTCC 59.996 47.826 0.00 0.00 41.34 3.85
3454 5359 3.114616 CTCACAAGCTCCACGCCG 61.115 66.667 0.00 0.00 40.39 6.46
3515 5423 0.917533 AGCACCATCTTCTCCTGCAT 59.082 50.000 0.00 0.00 0.00 3.96
3517 5425 1.407851 GCACCATCTTCTCCTGCATCA 60.408 52.381 0.00 0.00 0.00 3.07
3530 5438 3.591979 GCATCAGCAAAAGCCAACA 57.408 47.368 0.00 0.00 41.58 3.33
3533 5441 2.409975 CATCAGCAAAAGCCAACAAGG 58.590 47.619 0.00 0.00 41.84 3.61
3563 5471 4.154015 CACGCATGTCATTCTTGAAAGGTA 59.846 41.667 0.00 0.00 32.48 3.08
3571 5479 6.430925 TGTCATTCTTGAAAGGTAGGTGAATG 59.569 38.462 0.00 0.00 40.01 2.67
3663 5575 5.762179 TTAACACTCCACTCCTCATGAAT 57.238 39.130 0.00 0.00 0.00 2.57
3727 5639 2.041206 GCCCAGTTCCGGATCCCTAC 62.041 65.000 4.15 0.00 0.00 3.18
3812 5724 0.736053 TGGACAAAAGGTGCGTTGAC 59.264 50.000 0.00 0.00 41.41 3.18
4235 6157 7.752239 GTGTTGTATGAATCATGACTTCTTTGG 59.248 37.037 5.91 0.00 0.00 3.28
4300 6222 4.191544 CTCACCCGCATAATTCAAAGAGA 58.808 43.478 0.00 0.00 0.00 3.10
4371 6293 0.535102 GTTCATATGGAGCCCACCGG 60.535 60.000 0.00 0.00 35.80 5.28
4463 6385 4.320164 CACATAATTCCGACGACTATACGC 59.680 45.833 0.00 0.00 36.70 4.42
4464 6386 2.412421 AATTCCGACGACTATACGCC 57.588 50.000 0.00 0.00 36.70 5.68
4465 6387 1.311859 ATTCCGACGACTATACGCCA 58.688 50.000 0.00 0.00 36.70 5.69
4497 6419 3.783362 TTTGGGCCACACCAGACCG 62.783 63.158 5.23 0.00 42.47 4.79
4553 6480 3.492068 GGAAACGACCCCTCCCTT 58.508 61.111 0.00 0.00 0.00 3.95
4569 6496 4.438880 CCTCCCTTGTCGCAGTATATATCG 60.439 50.000 0.00 0.00 0.00 2.92
4667 6600 0.828022 ACGATGACCTAAATCCGCCA 59.172 50.000 0.00 0.00 0.00 5.69
5155 7133 3.541713 CCTACTCGAGCAGGGCCC 61.542 72.222 22.30 16.46 0.00 5.80
5188 7166 0.458260 GAGTTCGAGGAGAAGGAGGC 59.542 60.000 0.00 0.00 39.95 4.70
5189 7167 0.251832 AGTTCGAGGAGAAGGAGGCA 60.252 55.000 0.00 0.00 39.95 4.75
5190 7168 0.608640 GTTCGAGGAGAAGGAGGCAA 59.391 55.000 0.00 0.00 39.95 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 9.336171 GCTCTCATTCAATTCTTTTATACTCCT 57.664 33.333 0.00 0.00 0.00 3.69
6 7 9.336171 AGCTCTCATTCAATTCTTTTATACTCC 57.664 33.333 0.00 0.00 0.00 3.85
43 44 3.642705 GCCTGATTTTGACCAACTCAAC 58.357 45.455 0.00 0.00 38.70 3.18
48 49 2.607038 GGTTCGCCTGATTTTGACCAAC 60.607 50.000 0.00 0.00 0.00 3.77
64 65 6.072728 TGAGGTGTTCAATTGAAATAGGTTCG 60.073 38.462 22.07 0.00 34.05 3.95
130 131 3.007940 GGGTGCAAAGCCCTTCTTTTATT 59.992 43.478 3.59 0.00 42.82 1.40
204 207 2.844281 GCAGTTCATCGTGCTCTTTTC 58.156 47.619 0.00 0.00 36.71 2.29
275 282 5.796424 AGACGGTTTGGTTTCTTAGTCTA 57.204 39.130 0.00 0.00 36.15 2.59
415 441 2.948979 TGAAAAAGCAAAGCTCTTCCGA 59.051 40.909 9.78 0.00 38.25 4.55
689 724 7.973388 CACATTTAGGGCGAATGATAAGAAAAA 59.027 33.333 12.00 0.00 37.79 1.94
747 782 2.751806 GGGCTGAGAAAAACTCCATCAG 59.248 50.000 0.00 0.00 44.34 2.90
973 1015 8.739972 GCTCTTAGATTCCCACAATTTCTTTTA 58.260 33.333 0.00 0.00 0.00 1.52
978 1020 5.882557 TCTGCTCTTAGATTCCCACAATTTC 59.117 40.000 0.00 0.00 0.00 2.17
980 1022 5.441718 TCTGCTCTTAGATTCCCACAATT 57.558 39.130 0.00 0.00 0.00 2.32
981 1023 5.435291 CTTCTGCTCTTAGATTCCCACAAT 58.565 41.667 0.00 0.00 0.00 2.71
1054 1096 7.612065 TTCAGCATTATAACTAAGCTCCCTA 57.388 36.000 0.00 0.00 32.35 3.53
1055 1097 6.500589 TTCAGCATTATAACTAAGCTCCCT 57.499 37.500 0.00 0.00 32.35 4.20
1056 1098 7.751768 AATTCAGCATTATAACTAAGCTCCC 57.248 36.000 0.00 0.00 32.35 4.30
1057 1099 9.495572 ACTAATTCAGCATTATAACTAAGCTCC 57.504 33.333 0.00 0.00 32.35 4.70
1064 1325 7.201732 GGCACACACTAATTCAGCATTATAACT 60.202 37.037 0.00 0.00 0.00 2.24
1091 1352 1.441732 GGGCGTTCTTTTGTCACCGT 61.442 55.000 0.00 0.00 0.00 4.83
1440 2068 1.063027 CGTAGACGATGTAGACGCCAA 59.937 52.381 0.00 0.00 43.02 4.52
1811 2457 4.082523 ACGAGCATGTGGTCCCCG 62.083 66.667 6.62 0.00 39.23 5.73
2151 2798 3.185391 CGAAAGAAGACAGCTTTGAGACC 59.815 47.826 0.00 0.00 35.83 3.85
2192 2854 6.629128 TCAGTGTTTGAAGCTCAAAATTGAA 58.371 32.000 11.33 0.00 46.53 2.69
2193 2855 6.206395 TCAGTGTTTGAAGCTCAAAATTGA 57.794 33.333 11.33 11.70 46.53 2.57
2194 2856 6.890663 TTCAGTGTTTGAAGCTCAAAATTG 57.109 33.333 11.33 10.23 46.53 2.32
2220 2904 9.396022 CCGCTCCAAAATAGGACATAATATATT 57.604 33.333 2.97 2.97 33.19 1.28
2221 2905 7.499232 GCCGCTCCAAAATAGGACATAATATAT 59.501 37.037 0.00 0.00 33.19 0.86
2222 2906 6.821665 GCCGCTCCAAAATAGGACATAATATA 59.178 38.462 0.00 0.00 33.19 0.86
2223 2907 5.648092 GCCGCTCCAAAATAGGACATAATAT 59.352 40.000 0.00 0.00 33.19 1.28
2224 2908 5.001232 GCCGCTCCAAAATAGGACATAATA 58.999 41.667 0.00 0.00 33.19 0.98
2225 2909 3.821033 GCCGCTCCAAAATAGGACATAAT 59.179 43.478 0.00 0.00 33.19 1.28
2226 2910 3.118038 AGCCGCTCCAAAATAGGACATAA 60.118 43.478 0.00 0.00 33.19 1.90
2227 2911 2.438021 AGCCGCTCCAAAATAGGACATA 59.562 45.455 0.00 0.00 33.19 2.29
2228 2912 1.212935 AGCCGCTCCAAAATAGGACAT 59.787 47.619 0.00 0.00 33.19 3.06
2229 2913 0.618458 AGCCGCTCCAAAATAGGACA 59.382 50.000 0.00 0.00 33.19 4.02
2230 2914 1.751437 AAGCCGCTCCAAAATAGGAC 58.249 50.000 0.00 0.00 33.19 3.85
2231 2915 2.507407 AAAGCCGCTCCAAAATAGGA 57.493 45.000 0.00 0.00 36.00 2.94
2232 2916 4.918810 ATTAAAGCCGCTCCAAAATAGG 57.081 40.909 0.00 0.00 0.00 2.57
2233 2917 6.589907 ACAAAATTAAAGCCGCTCCAAAATAG 59.410 34.615 0.00 0.00 0.00 1.73
2234 2918 6.367422 CACAAAATTAAAGCCGCTCCAAAATA 59.633 34.615 0.00 0.00 0.00 1.40
2235 2919 5.179182 CACAAAATTAAAGCCGCTCCAAAAT 59.821 36.000 0.00 0.00 0.00 1.82
2236 2920 4.509600 CACAAAATTAAAGCCGCTCCAAAA 59.490 37.500 0.00 0.00 0.00 2.44
2237 2921 4.054671 CACAAAATTAAAGCCGCTCCAAA 58.945 39.130 0.00 0.00 0.00 3.28
2238 2922 3.648009 CACAAAATTAAAGCCGCTCCAA 58.352 40.909 0.00 0.00 0.00 3.53
2239 2923 2.609244 GCACAAAATTAAAGCCGCTCCA 60.609 45.455 0.00 0.00 0.00 3.86
2240 2924 1.992667 GCACAAAATTAAAGCCGCTCC 59.007 47.619 0.00 0.00 0.00 4.70
2241 2925 2.663119 CAGCACAAAATTAAAGCCGCTC 59.337 45.455 0.00 0.00 0.00 5.03
2242 2926 2.610232 CCAGCACAAAATTAAAGCCGCT 60.610 45.455 0.00 0.00 0.00 5.52
2243 2927 1.726248 CCAGCACAAAATTAAAGCCGC 59.274 47.619 0.00 0.00 0.00 6.53
2244 2928 1.726248 GCCAGCACAAAATTAAAGCCG 59.274 47.619 0.00 0.00 0.00 5.52
2245 2929 2.995939 GAGCCAGCACAAAATTAAAGCC 59.004 45.455 0.00 0.00 0.00 4.35
2246 2930 3.652274 TGAGCCAGCACAAAATTAAAGC 58.348 40.909 0.00 0.00 0.00 3.51
2247 2931 4.919754 GTCTGAGCCAGCACAAAATTAAAG 59.080 41.667 0.00 0.00 0.00 1.85
2248 2932 4.340666 TGTCTGAGCCAGCACAAAATTAAA 59.659 37.500 0.00 0.00 0.00 1.52
2249 2933 3.888323 TGTCTGAGCCAGCACAAAATTAA 59.112 39.130 0.00 0.00 0.00 1.40
2250 2934 3.485394 TGTCTGAGCCAGCACAAAATTA 58.515 40.909 0.00 0.00 0.00 1.40
2251 2935 2.309613 TGTCTGAGCCAGCACAAAATT 58.690 42.857 0.00 0.00 0.00 1.82
2252 2936 1.985473 TGTCTGAGCCAGCACAAAAT 58.015 45.000 0.00 0.00 0.00 1.82
2253 2937 1.761449 TTGTCTGAGCCAGCACAAAA 58.239 45.000 12.83 0.00 32.83 2.44
2254 2938 1.985473 ATTGTCTGAGCCAGCACAAA 58.015 45.000 16.15 0.00 36.22 2.83
2255 2939 2.857186 TATTGTCTGAGCCAGCACAA 57.143 45.000 15.32 15.32 36.64 3.33
2256 2940 2.026915 ACATATTGTCTGAGCCAGCACA 60.027 45.455 0.00 0.00 0.00 4.57
2257 2941 2.636830 ACATATTGTCTGAGCCAGCAC 58.363 47.619 0.00 0.00 0.00 4.40
2258 2942 3.737972 CGTACATATTGTCTGAGCCAGCA 60.738 47.826 0.00 0.00 0.00 4.41
2259 2943 2.797156 CGTACATATTGTCTGAGCCAGC 59.203 50.000 0.00 0.00 0.00 4.85
2260 2944 3.798878 CACGTACATATTGTCTGAGCCAG 59.201 47.826 0.00 0.00 0.00 4.85
2261 2945 3.430236 CCACGTACATATTGTCTGAGCCA 60.430 47.826 0.00 0.00 0.00 4.75
2262 2946 3.123804 CCACGTACATATTGTCTGAGCC 58.876 50.000 0.00 0.00 0.00 4.70
2263 2947 3.782046 ACCACGTACATATTGTCTGAGC 58.218 45.455 0.00 0.00 0.00 4.26
2264 2948 6.802348 GCTATACCACGTACATATTGTCTGAG 59.198 42.308 0.00 0.00 0.00 3.35
2265 2949 6.567132 CGCTATACCACGTACATATTGTCTGA 60.567 42.308 0.00 0.00 0.00 3.27
2266 2950 5.567915 CGCTATACCACGTACATATTGTCTG 59.432 44.000 0.00 0.00 0.00 3.51
2267 2951 5.240183 ACGCTATACCACGTACATATTGTCT 59.760 40.000 0.00 0.00 41.48 3.41
2268 2952 5.455392 ACGCTATACCACGTACATATTGTC 58.545 41.667 0.00 0.00 41.48 3.18
2269 2953 5.443185 ACGCTATACCACGTACATATTGT 57.557 39.130 0.00 0.00 41.48 2.71
2270 2954 8.393366 ACTATACGCTATACCACGTACATATTG 58.607 37.037 0.00 0.00 46.38 1.90
2271 2955 8.498054 ACTATACGCTATACCACGTACATATT 57.502 34.615 0.00 0.00 46.38 1.28
2272 2956 9.035607 GTACTATACGCTATACCACGTACATAT 57.964 37.037 0.00 0.00 46.38 1.78
2273 2957 8.032451 TGTACTATACGCTATACCACGTACATA 58.968 37.037 0.00 0.00 46.38 2.29
2274 2958 6.873605 TGTACTATACGCTATACCACGTACAT 59.126 38.462 0.00 0.00 46.38 2.29
2275 2959 6.220201 TGTACTATACGCTATACCACGTACA 58.780 40.000 0.00 0.00 46.38 2.90
2276 2960 6.706055 TGTACTATACGCTATACCACGTAC 57.294 41.667 0.00 0.00 46.38 3.67
2278 2962 5.702670 ACATGTACTATACGCTATACCACGT 59.297 40.000 0.00 0.00 45.85 4.49
2279 2963 6.019762 CACATGTACTATACGCTATACCACG 58.980 44.000 0.00 0.00 0.00 4.94
2280 2964 7.020010 GTCACATGTACTATACGCTATACCAC 58.980 42.308 0.00 0.00 0.00 4.16
2281 2965 6.149973 GGTCACATGTACTATACGCTATACCA 59.850 42.308 0.00 0.00 0.00 3.25
2282 2966 6.149973 TGGTCACATGTACTATACGCTATACC 59.850 42.308 0.00 0.00 0.00 2.73
2283 2967 7.020010 GTGGTCACATGTACTATACGCTATAC 58.980 42.308 0.00 0.00 0.00 1.47
2284 2968 6.149973 GGTGGTCACATGTACTATACGCTATA 59.850 42.308 0.00 0.00 0.00 1.31
2285 2969 5.048224 GGTGGTCACATGTACTATACGCTAT 60.048 44.000 0.00 0.00 0.00 2.97
2286 2970 4.276678 GGTGGTCACATGTACTATACGCTA 59.723 45.833 0.00 0.00 0.00 4.26
2287 2971 3.067742 GGTGGTCACATGTACTATACGCT 59.932 47.826 0.00 0.00 0.00 5.07
2288 2972 3.067742 AGGTGGTCACATGTACTATACGC 59.932 47.826 0.00 0.00 0.00 4.42
2289 2973 4.913335 AGGTGGTCACATGTACTATACG 57.087 45.455 0.00 0.00 0.00 3.06
2290 2974 5.293569 GCAAAGGTGGTCACATGTACTATAC 59.706 44.000 0.00 0.00 0.00 1.47
2291 2975 5.046231 TGCAAAGGTGGTCACATGTACTATA 60.046 40.000 0.00 0.00 0.00 1.31
2292 2976 4.261801 GCAAAGGTGGTCACATGTACTAT 58.738 43.478 0.00 0.00 0.00 2.12
2293 2977 3.071747 TGCAAAGGTGGTCACATGTACTA 59.928 43.478 0.00 0.00 0.00 1.82
2294 2978 2.158682 TGCAAAGGTGGTCACATGTACT 60.159 45.455 0.00 0.00 0.00 2.73
2295 2979 2.226330 TGCAAAGGTGGTCACATGTAC 58.774 47.619 0.00 0.00 0.00 2.90
2296 2980 2.647683 TGCAAAGGTGGTCACATGTA 57.352 45.000 0.00 0.00 0.00 2.29
2297 2981 1.999648 ATGCAAAGGTGGTCACATGT 58.000 45.000 0.00 0.00 0.00 3.21
2298 2982 3.346315 TCTATGCAAAGGTGGTCACATG 58.654 45.455 0.00 0.00 0.00 3.21
2299 2983 3.719268 TCTATGCAAAGGTGGTCACAT 57.281 42.857 0.00 0.00 0.00 3.21
2300 2984 3.500448 TTCTATGCAAAGGTGGTCACA 57.500 42.857 0.00 0.00 0.00 3.58
2301 2985 4.846779 TTTTCTATGCAAAGGTGGTCAC 57.153 40.909 0.00 0.00 0.00 3.67
2302 2986 6.945435 TCTATTTTTCTATGCAAAGGTGGTCA 59.055 34.615 0.00 0.00 0.00 4.02
2303 2987 7.391148 TCTATTTTTCTATGCAAAGGTGGTC 57.609 36.000 0.00 0.00 0.00 4.02
2304 2988 7.775053 TTCTATTTTTCTATGCAAAGGTGGT 57.225 32.000 0.00 0.00 0.00 4.16
2305 2989 8.925700 GTTTTCTATTTTTCTATGCAAAGGTGG 58.074 33.333 0.00 0.00 0.00 4.61
2306 2990 9.696917 AGTTTTCTATTTTTCTATGCAAAGGTG 57.303 29.630 0.00 0.00 0.00 4.00
2307 2991 9.914131 GAGTTTTCTATTTTTCTATGCAAAGGT 57.086 29.630 0.00 0.00 0.00 3.50
2308 2992 9.358872 GGAGTTTTCTATTTTTCTATGCAAAGG 57.641 33.333 0.00 0.00 0.00 3.11
2309 2993 9.358872 GGGAGTTTTCTATTTTTCTATGCAAAG 57.641 33.333 0.00 0.00 0.00 2.77
2310 2994 8.311109 GGGGAGTTTTCTATTTTTCTATGCAAA 58.689 33.333 0.00 0.00 0.00 3.68
2311 2995 7.093509 GGGGGAGTTTTCTATTTTTCTATGCAA 60.094 37.037 0.00 0.00 0.00 4.08
2312 2996 6.379988 GGGGGAGTTTTCTATTTTTCTATGCA 59.620 38.462 0.00 0.00 0.00 3.96
2313 2997 6.379988 TGGGGGAGTTTTCTATTTTTCTATGC 59.620 38.462 0.00 0.00 0.00 3.14
2314 2998 7.954666 TGGGGGAGTTTTCTATTTTTCTATG 57.045 36.000 0.00 0.00 0.00 2.23
2315 2999 8.966155 TTTGGGGGAGTTTTCTATTTTTCTAT 57.034 30.769 0.00 0.00 0.00 1.98
2316 3000 8.785184 TTTTGGGGGAGTTTTCTATTTTTCTA 57.215 30.769 0.00 0.00 0.00 2.10
2317 3001 7.684317 TTTTGGGGGAGTTTTCTATTTTTCT 57.316 32.000 0.00 0.00 0.00 2.52
2344 3028 9.830975 TCTGCAAATTTATACTATTCTGTGCTA 57.169 29.630 0.00 0.00 0.00 3.49
2345 3029 8.737168 TCTGCAAATTTATACTATTCTGTGCT 57.263 30.769 0.00 0.00 0.00 4.40
2360 3044 9.783081 AGATTTTCCAAACTTATCTGCAAATTT 57.217 25.926 0.00 0.00 0.00 1.82
2361 3045 9.211485 CAGATTTTCCAAACTTATCTGCAAATT 57.789 29.630 0.00 0.00 36.78 1.82
2362 3046 8.587608 TCAGATTTTCCAAACTTATCTGCAAAT 58.412 29.630 0.00 0.00 41.10 2.32
2363 3047 7.950512 TCAGATTTTCCAAACTTATCTGCAAA 58.049 30.769 0.00 0.00 41.10 3.68
2364 3048 7.523293 TCAGATTTTCCAAACTTATCTGCAA 57.477 32.000 0.00 0.00 41.10 4.08
2365 3049 7.523293 TTCAGATTTTCCAAACTTATCTGCA 57.477 32.000 0.00 0.00 41.10 4.41
2366 3050 6.529477 GCTTCAGATTTTCCAAACTTATCTGC 59.471 38.462 0.00 0.00 41.10 4.26
2367 3051 7.824672 AGCTTCAGATTTTCCAAACTTATCTG 58.175 34.615 0.00 0.00 42.12 2.90
2368 3052 8.414629 AAGCTTCAGATTTTCCAAACTTATCT 57.585 30.769 0.00 0.00 0.00 1.98
2369 3053 9.481340 AAAAGCTTCAGATTTTCCAAACTTATC 57.519 29.630 0.00 0.00 39.10 1.75
2372 3056 9.098355 GTTAAAAGCTTCAGATTTTCCAAACTT 57.902 29.630 6.07 0.00 41.92 2.66
2373 3057 7.435192 CGTTAAAAGCTTCAGATTTTCCAAACT 59.565 33.333 6.07 0.00 41.92 2.66
2374 3058 7.434013 TCGTTAAAAGCTTCAGATTTTCCAAAC 59.566 33.333 6.07 5.49 41.92 2.93
2375 3059 7.484975 TCGTTAAAAGCTTCAGATTTTCCAAA 58.515 30.769 6.07 0.00 41.92 3.28
2376 3060 7.033530 TCGTTAAAAGCTTCAGATTTTCCAA 57.966 32.000 6.07 0.00 41.92 3.53
2377 3061 6.627395 TCGTTAAAAGCTTCAGATTTTCCA 57.373 33.333 6.07 0.00 41.92 3.53
2378 3062 7.139392 AGTTCGTTAAAAGCTTCAGATTTTCC 58.861 34.615 6.07 0.00 41.92 3.13
2379 3063 8.472236 CAAGTTCGTTAAAAGCTTCAGATTTTC 58.528 33.333 6.07 0.00 41.92 2.29
2380 3064 7.435192 CCAAGTTCGTTAAAAGCTTCAGATTTT 59.565 33.333 0.00 7.84 44.53 1.82
2381 3065 6.918022 CCAAGTTCGTTAAAAGCTTCAGATTT 59.082 34.615 0.00 0.00 34.83 2.17
2382 3066 6.262273 TCCAAGTTCGTTAAAAGCTTCAGATT 59.738 34.615 0.00 0.00 0.00 2.40
2383 3067 5.763204 TCCAAGTTCGTTAAAAGCTTCAGAT 59.237 36.000 0.00 0.00 0.00 2.90
2384 3068 5.120399 TCCAAGTTCGTTAAAAGCTTCAGA 58.880 37.500 0.00 0.00 0.00 3.27
2385 3069 5.418310 TCCAAGTTCGTTAAAAGCTTCAG 57.582 39.130 0.00 0.00 0.00 3.02
2386 3070 5.821516 TTCCAAGTTCGTTAAAAGCTTCA 57.178 34.783 0.00 0.00 0.00 3.02
2387 3071 7.222031 ACATTTTCCAAGTTCGTTAAAAGCTTC 59.778 33.333 0.00 0.00 0.00 3.86
2398 3082 9.848172 CTTTTCAAATTACATTTTCCAAGTTCG 57.152 29.630 0.00 0.00 0.00 3.95
2408 3092 9.696917 GTGGATCTGTCTTTTCAAATTACATTT 57.303 29.630 0.00 0.00 0.00 2.32
2411 3095 8.999431 GTAGTGGATCTGTCTTTTCAAATTACA 58.001 33.333 0.00 0.00 0.00 2.41
2431 3115 5.527214 TCGCAAATCATTTATGGAGTAGTGG 59.473 40.000 0.00 0.00 0.00 4.00
2444 3128 3.755965 TTACGCACATCGCAAATCATT 57.244 38.095 0.00 0.00 42.60 2.57
2448 3132 2.598192 GCATTTTACGCACATCGCAAAT 59.402 40.909 0.00 0.00 42.60 2.32
2449 3133 1.982223 GCATTTTACGCACATCGCAAA 59.018 42.857 0.00 0.00 42.60 3.68
2450 3134 1.612156 GCATTTTACGCACATCGCAA 58.388 45.000 0.00 0.00 42.60 4.85
2451 3135 0.179176 GGCATTTTACGCACATCGCA 60.179 50.000 0.00 0.00 42.60 5.10
2452 3136 0.179176 TGGCATTTTACGCACATCGC 60.179 50.000 0.00 0.00 43.23 4.58
2453 3137 2.254918 TTGGCATTTTACGCACATCG 57.745 45.000 0.00 0.00 45.38 3.84
2454 3138 4.734854 CACTATTGGCATTTTACGCACATC 59.265 41.667 0.00 0.00 0.00 3.06
2455 3139 4.671377 CACTATTGGCATTTTACGCACAT 58.329 39.130 0.00 0.00 0.00 3.21
2456 3140 3.671971 GCACTATTGGCATTTTACGCACA 60.672 43.478 0.00 0.00 0.00 4.57
2457 3141 2.851824 GCACTATTGGCATTTTACGCAC 59.148 45.455 0.00 0.00 0.00 5.34
2458 3142 3.143807 GCACTATTGGCATTTTACGCA 57.856 42.857 0.00 0.00 0.00 5.24
2469 3153 3.055530 CCCTATAGCTCAGGCACTATTGG 60.056 52.174 8.51 0.00 39.80 3.16
2470 3154 3.834813 TCCCTATAGCTCAGGCACTATTG 59.165 47.826 8.51 0.00 41.70 1.90
2471 3155 4.093011 CTCCCTATAGCTCAGGCACTATT 58.907 47.826 8.51 0.00 41.70 1.73
2472 3156 3.707316 CTCCCTATAGCTCAGGCACTAT 58.293 50.000 8.51 0.00 41.70 2.12
2473 3157 2.819726 GCTCCCTATAGCTCAGGCACTA 60.820 54.545 8.51 0.00 41.70 2.74
2474 3158 2.008242 CTCCCTATAGCTCAGGCACT 57.992 55.000 8.51 0.00 41.70 4.40
2475 3159 0.320050 GCTCCCTATAGCTCAGGCAC 59.680 60.000 8.51 0.00 41.70 5.01
2476 3160 2.751991 GCTCCCTATAGCTCAGGCA 58.248 57.895 8.51 0.00 41.70 4.75
2483 3167 3.793559 TGAAAAACGAGCTCCCTATAGC 58.206 45.455 8.47 0.00 43.11 2.97
2484 3168 6.927294 ATTTGAAAAACGAGCTCCCTATAG 57.073 37.500 8.47 0.00 0.00 1.31
2485 3169 6.882140 TGAATTTGAAAAACGAGCTCCCTATA 59.118 34.615 8.47 0.00 0.00 1.31
2486 3170 5.710099 TGAATTTGAAAAACGAGCTCCCTAT 59.290 36.000 8.47 0.00 0.00 2.57
2487 3171 5.067273 TGAATTTGAAAAACGAGCTCCCTA 58.933 37.500 8.47 0.00 0.00 3.53
2488 3172 3.888930 TGAATTTGAAAAACGAGCTCCCT 59.111 39.130 8.47 0.00 0.00 4.20
2489 3173 4.237349 TGAATTTGAAAAACGAGCTCCC 57.763 40.909 8.47 0.00 0.00 4.30
2490 3174 8.466086 AAATATGAATTTGAAAAACGAGCTCC 57.534 30.769 8.47 0.00 33.97 4.70
2499 3183 8.782144 GGGCTGTGAAAAATATGAATTTGAAAA 58.218 29.630 0.00 0.00 35.46 2.29
2500 3184 7.935755 TGGGCTGTGAAAAATATGAATTTGAAA 59.064 29.630 0.00 0.00 35.46 2.69
2501 3185 7.448420 TGGGCTGTGAAAAATATGAATTTGAA 58.552 30.769 0.00 0.00 35.46 2.69
2502 3186 7.002250 TGGGCTGTGAAAAATATGAATTTGA 57.998 32.000 0.00 0.00 35.46 2.69
2503 3187 7.670009 TTGGGCTGTGAAAAATATGAATTTG 57.330 32.000 0.00 0.00 35.46 2.32
2504 3188 8.688747 TTTTGGGCTGTGAAAAATATGAATTT 57.311 26.923 0.00 0.00 36.87 1.82
2505 3189 8.688747 TTTTTGGGCTGTGAAAAATATGAATT 57.311 26.923 0.00 0.00 0.00 2.17
2506 3190 8.866970 ATTTTTGGGCTGTGAAAAATATGAAT 57.133 26.923 0.00 0.00 36.29 2.57
2507 3191 8.688747 AATTTTTGGGCTGTGAAAAATATGAA 57.311 26.923 0.00 0.00 36.29 2.57
2508 3192 8.688747 AAATTTTTGGGCTGTGAAAAATATGA 57.311 26.923 0.00 0.00 36.29 2.15
2509 3193 7.745594 CGAAATTTTTGGGCTGTGAAAAATATG 59.254 33.333 0.00 0.00 36.29 1.78
2510 3194 7.659390 TCGAAATTTTTGGGCTGTGAAAAATAT 59.341 29.630 0.00 0.00 36.29 1.28
2511 3195 6.986817 TCGAAATTTTTGGGCTGTGAAAAATA 59.013 30.769 0.00 0.00 36.29 1.40
2512 3196 5.819901 TCGAAATTTTTGGGCTGTGAAAAAT 59.180 32.000 0.00 0.00 36.29 1.82
2513 3197 5.178797 TCGAAATTTTTGGGCTGTGAAAAA 58.821 33.333 0.00 0.00 35.95 1.94
2514 3198 4.759782 TCGAAATTTTTGGGCTGTGAAAA 58.240 34.783 0.00 0.00 0.00 2.29
2515 3199 4.392921 TCGAAATTTTTGGGCTGTGAAA 57.607 36.364 0.00 0.00 0.00 2.69
2516 3200 4.599047 ATCGAAATTTTTGGGCTGTGAA 57.401 36.364 0.00 0.00 0.00 3.18
2517 3201 4.599047 AATCGAAATTTTTGGGCTGTGA 57.401 36.364 0.00 0.00 0.00 3.58
2518 3202 5.671742 AAAATCGAAATTTTTGGGCTGTG 57.328 34.783 0.00 0.00 41.27 3.66
2519 3203 7.977789 AATAAAATCGAAATTTTTGGGCTGT 57.022 28.000 2.32 0.00 41.27 4.40
2520 3204 8.288913 ACAAATAAAATCGAAATTTTTGGGCTG 58.711 29.630 2.32 0.41 41.27 4.85
2521 3205 8.288913 CACAAATAAAATCGAAATTTTTGGGCT 58.711 29.630 2.32 0.00 41.27 5.19
2522 3206 7.536964 CCACAAATAAAATCGAAATTTTTGGGC 59.463 33.333 15.92 0.00 41.27 5.36
2523 3207 8.778358 TCCACAAATAAAATCGAAATTTTTGGG 58.222 29.630 19.77 13.99 41.27 4.12
2524 3208 9.592720 GTCCACAAATAAAATCGAAATTTTTGG 57.407 29.630 16.81 16.81 41.27 3.28
2527 3211 9.319143 TGTGTCCACAAATAAAATCGAAATTTT 57.681 25.926 0.00 3.82 41.57 1.82
2528 3212 8.760569 GTGTGTCCACAAATAAAATCGAAATTT 58.239 29.630 0.93 0.00 43.77 1.82
2529 3213 8.141268 AGTGTGTCCACAAATAAAATCGAAATT 58.859 29.630 0.93 0.00 44.39 1.82
2530 3214 7.657336 AGTGTGTCCACAAATAAAATCGAAAT 58.343 30.769 0.93 0.00 44.39 2.17
2531 3215 7.033530 AGTGTGTCCACAAATAAAATCGAAA 57.966 32.000 0.93 0.00 44.39 3.46
2532 3216 6.627395 AGTGTGTCCACAAATAAAATCGAA 57.373 33.333 0.93 0.00 44.39 3.71
2533 3217 6.148150 GGTAGTGTGTCCACAAATAAAATCGA 59.852 38.462 0.93 0.00 44.39 3.59
2534 3218 6.072948 TGGTAGTGTGTCCACAAATAAAATCG 60.073 38.462 0.93 0.00 44.39 3.34
2535 3219 7.209471 TGGTAGTGTGTCCACAAATAAAATC 57.791 36.000 0.93 0.00 44.39 2.17
2546 3230 2.542020 CACATGTGGTAGTGTGTCCA 57.458 50.000 18.51 0.00 40.54 4.02
2552 3236 3.176708 GCGTAGTACACATGTGGTAGTG 58.823 50.000 28.64 14.72 41.40 2.74
2553 3237 2.821378 TGCGTAGTACACATGTGGTAGT 59.179 45.455 28.64 20.78 34.19 2.73
2554 3238 3.497297 TGCGTAGTACACATGTGGTAG 57.503 47.619 28.64 14.40 34.19 3.18
2555 3239 3.193903 ACATGCGTAGTACACATGTGGTA 59.806 43.478 27.84 15.66 46.44 3.25
2556 3240 2.028476 ACATGCGTAGTACACATGTGGT 60.028 45.455 27.84 16.62 46.44 4.16
2557 3241 2.616960 ACATGCGTAGTACACATGTGG 58.383 47.619 27.84 11.54 46.44 4.17
2560 3244 5.771602 TTTACACATGCGTAGTACACATG 57.228 39.130 23.52 23.52 42.57 3.21
2561 3245 6.978343 ATTTTACACATGCGTAGTACACAT 57.022 33.333 0.38 0.00 0.00 3.21
2562 3246 6.788684 AATTTTACACATGCGTAGTACACA 57.211 33.333 0.38 0.00 0.00 3.72
2563 3247 7.267600 GTGAAATTTTACACATGCGTAGTACAC 59.732 37.037 8.14 0.00 37.05 2.90
2564 3248 7.041984 TGTGAAATTTTACACATGCGTAGTACA 60.042 33.333 11.43 0.00 41.19 2.90
2565 3249 7.292292 TGTGAAATTTTACACATGCGTAGTAC 58.708 34.615 11.43 0.00 41.19 2.73
2566 3250 7.422878 TGTGAAATTTTACACATGCGTAGTA 57.577 32.000 11.43 0.00 41.19 1.82
2567 3251 6.307031 TGTGAAATTTTACACATGCGTAGT 57.693 33.333 11.43 0.00 41.19 2.73
2568 3252 5.283717 GCTGTGAAATTTTACACATGCGTAG 59.716 40.000 11.43 1.83 44.21 3.51
2569 3253 5.150683 GCTGTGAAATTTTACACATGCGTA 58.849 37.500 11.43 0.00 44.21 4.42
2570 3254 3.980775 GCTGTGAAATTTTACACATGCGT 59.019 39.130 11.43 0.00 44.21 5.24
2571 3255 3.980134 TGCTGTGAAATTTTACACATGCG 59.020 39.130 11.43 3.77 44.21 4.73
2572 3256 4.984161 AGTGCTGTGAAATTTTACACATGC 59.016 37.500 11.43 13.47 44.21 4.06
2573 3257 9.277565 GTATAGTGCTGTGAAATTTTACACATG 57.722 33.333 11.43 4.42 44.21 3.21
2574 3258 9.231297 AGTATAGTGCTGTGAAATTTTACACAT 57.769 29.630 11.43 1.45 44.21 3.21
2575 3259 8.615878 AGTATAGTGCTGTGAAATTTTACACA 57.384 30.769 11.43 11.24 43.31 3.72
2576 3260 9.543018 GAAGTATAGTGCTGTGAAATTTTACAC 57.457 33.333 11.43 7.30 37.51 2.90
2577 3261 9.278978 TGAAGTATAGTGCTGTGAAATTTTACA 57.721 29.630 14.35 14.35 0.00 2.41
2578 3262 9.543018 GTGAAGTATAGTGCTGTGAAATTTTAC 57.457 33.333 6.16 6.16 0.00 2.01
2579 3263 9.278978 TGTGAAGTATAGTGCTGTGAAATTTTA 57.721 29.630 0.00 0.00 0.00 1.52
2580 3264 8.076178 GTGTGAAGTATAGTGCTGTGAAATTTT 58.924 33.333 0.00 0.00 0.00 1.82
2581 3265 7.571244 CGTGTGAAGTATAGTGCTGTGAAATTT 60.571 37.037 0.00 0.00 0.00 1.82
2582 3266 6.128553 CGTGTGAAGTATAGTGCTGTGAAATT 60.129 38.462 0.00 0.00 0.00 1.82
2583 3267 5.348724 CGTGTGAAGTATAGTGCTGTGAAAT 59.651 40.000 0.00 0.00 0.00 2.17
2584 3268 4.684242 CGTGTGAAGTATAGTGCTGTGAAA 59.316 41.667 0.00 0.00 0.00 2.69
2585 3269 4.234574 CGTGTGAAGTATAGTGCTGTGAA 58.765 43.478 0.00 0.00 0.00 3.18
2586 3270 3.254903 ACGTGTGAAGTATAGTGCTGTGA 59.745 43.478 0.00 0.00 0.00 3.58
2587 3271 3.364920 CACGTGTGAAGTATAGTGCTGTG 59.635 47.826 7.58 0.00 0.00 3.66
2588 3272 3.575630 CACGTGTGAAGTATAGTGCTGT 58.424 45.455 7.58 0.00 0.00 4.40
2589 3273 2.923655 CCACGTGTGAAGTATAGTGCTG 59.076 50.000 15.65 0.00 0.00 4.41
2590 3274 2.674177 GCCACGTGTGAAGTATAGTGCT 60.674 50.000 15.65 0.00 0.00 4.40
2591 3275 1.659098 GCCACGTGTGAAGTATAGTGC 59.341 52.381 15.65 1.88 0.00 4.40
2592 3276 1.917955 CGCCACGTGTGAAGTATAGTG 59.082 52.381 15.65 0.00 0.00 2.74
2593 3277 1.542915 ACGCCACGTGTGAAGTATAGT 59.457 47.619 15.65 0.00 39.18 2.12
2594 3278 2.273370 ACGCCACGTGTGAAGTATAG 57.727 50.000 15.65 0.00 39.18 1.31
2595 3279 3.846423 TTACGCCACGTGTGAAGTATA 57.154 42.857 15.65 2.44 41.39 1.47
2596 3280 2.728690 TTACGCCACGTGTGAAGTAT 57.271 45.000 15.65 0.00 41.39 2.12
2597 3281 2.505628 TTTACGCCACGTGTGAAGTA 57.494 45.000 15.65 9.77 41.39 2.24
2598 3282 1.654317 TTTTACGCCACGTGTGAAGT 58.346 45.000 15.65 10.74 41.39 3.01
2599 3283 2.741122 TTTTTACGCCACGTGTGAAG 57.259 45.000 15.65 5.09 41.39 3.02
2620 3304 8.676401 GCCCATTTAAAAATGCATATTTGTCTT 58.324 29.630 0.00 0.00 43.38 3.01
2621 3305 7.282901 GGCCCATTTAAAAATGCATATTTGTCT 59.717 33.333 0.00 0.00 43.38 3.41
2622 3306 7.282901 AGGCCCATTTAAAAATGCATATTTGTC 59.717 33.333 0.00 0.00 43.38 3.18
2623 3307 7.118060 AGGCCCATTTAAAAATGCATATTTGT 58.882 30.769 0.00 0.00 43.38 2.83
2624 3308 7.571080 AGGCCCATTTAAAAATGCATATTTG 57.429 32.000 0.00 0.00 43.38 2.32
2625 3309 8.592529 AAAGGCCCATTTAAAAATGCATATTT 57.407 26.923 0.00 0.16 43.38 1.40
2626 3310 8.592529 AAAAGGCCCATTTAAAAATGCATATT 57.407 26.923 0.00 0.79 43.38 1.28
2627 3311 8.592529 AAAAAGGCCCATTTAAAAATGCATAT 57.407 26.923 0.00 0.00 43.38 1.78
2628 3312 9.692325 ATAAAAAGGCCCATTTAAAAATGCATA 57.308 25.926 12.96 0.00 43.38 3.14
2629 3313 6.914654 AAAAAGGCCCATTTAAAAATGCAT 57.085 29.167 0.00 0.00 43.38 3.96
2630 3314 8.414629 AATAAAAAGGCCCATTTAAAAATGCA 57.585 26.923 12.96 0.00 43.38 3.96
2631 3315 9.703892 AAAATAAAAAGGCCCATTTAAAAATGC 57.296 25.926 12.96 0.57 43.38 3.56
2637 3321 9.190317 ACAACAAAAATAAAAAGGCCCATTTAA 57.810 25.926 12.96 0.00 0.00 1.52
2638 3322 8.753497 ACAACAAAAATAAAAAGGCCCATTTA 57.247 26.923 11.71 11.71 0.00 1.40
2639 3323 7.652524 ACAACAAAAATAAAAAGGCCCATTT 57.347 28.000 0.00 3.52 0.00 2.32
2640 3324 7.340487 TCAACAACAAAAATAAAAAGGCCCATT 59.660 29.630 0.00 0.00 0.00 3.16
2641 3325 6.830838 TCAACAACAAAAATAAAAAGGCCCAT 59.169 30.769 0.00 0.00 0.00 4.00
2642 3326 6.180472 TCAACAACAAAAATAAAAAGGCCCA 58.820 32.000 0.00 0.00 0.00 5.36
2643 3327 6.685527 TCAACAACAAAAATAAAAAGGCCC 57.314 33.333 0.00 0.00 0.00 5.80
2644 3328 6.038161 AGCTCAACAACAAAAATAAAAAGGCC 59.962 34.615 0.00 0.00 0.00 5.19
2645 3329 6.906678 CAGCTCAACAACAAAAATAAAAAGGC 59.093 34.615 0.00 0.00 0.00 4.35
2646 3330 7.279758 TCCAGCTCAACAACAAAAATAAAAAGG 59.720 33.333 0.00 0.00 0.00 3.11
2647 3331 8.195617 TCCAGCTCAACAACAAAAATAAAAAG 57.804 30.769 0.00 0.00 0.00 2.27
2648 3332 8.729805 ATCCAGCTCAACAACAAAAATAAAAA 57.270 26.923 0.00 0.00 0.00 1.94
2649 3333 8.729805 AATCCAGCTCAACAACAAAAATAAAA 57.270 26.923 0.00 0.00 0.00 1.52
2650 3334 8.729805 AAATCCAGCTCAACAACAAAAATAAA 57.270 26.923 0.00 0.00 0.00 1.40
2651 3335 8.729805 AAAATCCAGCTCAACAACAAAAATAA 57.270 26.923 0.00 0.00 0.00 1.40
2652 3336 8.729805 AAAAATCCAGCTCAACAACAAAAATA 57.270 26.923 0.00 0.00 0.00 1.40
2653 3337 7.628769 AAAAATCCAGCTCAACAACAAAAAT 57.371 28.000 0.00 0.00 0.00 1.82
2677 3361 9.660180 AAAAATGTTCTTTGTAGGCTGTAAAAA 57.340 25.926 0.00 0.00 0.00 1.94
2680 3364 9.738832 GTTAAAAATGTTCTTTGTAGGCTGTAA 57.261 29.630 0.00 0.00 0.00 2.41
2681 3365 8.904834 TGTTAAAAATGTTCTTTGTAGGCTGTA 58.095 29.630 0.00 0.00 0.00 2.74
2682 3366 7.704899 GTGTTAAAAATGTTCTTTGTAGGCTGT 59.295 33.333 0.00 0.00 0.00 4.40
2683 3367 7.096640 CGTGTTAAAAATGTTCTTTGTAGGCTG 60.097 37.037 0.00 0.00 0.00 4.85
2684 3368 6.915843 CGTGTTAAAAATGTTCTTTGTAGGCT 59.084 34.615 0.00 0.00 0.00 4.58
2685 3369 6.693978 ACGTGTTAAAAATGTTCTTTGTAGGC 59.306 34.615 0.00 0.00 0.00 3.93
2686 3370 8.623310 AACGTGTTAAAAATGTTCTTTGTAGG 57.377 30.769 0.00 0.00 0.00 3.18
2687 3371 9.498307 AGAACGTGTTAAAAATGTTCTTTGTAG 57.502 29.630 16.11 0.00 46.73 2.74
2694 3378 5.331235 CCGCAAGAACGTGTTAAAAATGTTC 60.331 40.000 13.16 13.16 41.74 3.18
2695 3379 4.501198 CCGCAAGAACGTGTTAAAAATGTT 59.499 37.500 0.00 0.00 43.02 2.71
2696 3380 4.039032 CCGCAAGAACGTGTTAAAAATGT 58.961 39.130 0.00 0.00 43.02 2.71
2697 3381 4.283678 TCCGCAAGAACGTGTTAAAAATG 58.716 39.130 0.00 0.00 43.02 2.32
2698 3382 4.555348 TCCGCAAGAACGTGTTAAAAAT 57.445 36.364 0.00 0.00 43.02 1.82
2699 3383 4.555348 ATCCGCAAGAACGTGTTAAAAA 57.445 36.364 0.00 0.00 43.02 1.94
2700 3384 4.283678 CAATCCGCAAGAACGTGTTAAAA 58.716 39.130 0.00 0.00 43.02 1.52
2701 3385 3.850374 GCAATCCGCAAGAACGTGTTAAA 60.850 43.478 0.00 0.00 41.79 1.52
2702 3386 2.350007 GCAATCCGCAAGAACGTGTTAA 60.350 45.455 0.00 0.00 41.79 2.01
2703 3387 1.195900 GCAATCCGCAAGAACGTGTTA 59.804 47.619 0.00 0.00 41.79 2.41
2704 3388 0.040425 GCAATCCGCAAGAACGTGTT 60.040 50.000 0.00 0.00 41.79 3.32
2705 3389 1.574428 GCAATCCGCAAGAACGTGT 59.426 52.632 0.00 0.00 41.79 4.49
2706 3390 4.440214 GCAATCCGCAAGAACGTG 57.560 55.556 0.00 0.00 41.79 4.49
2715 3399 5.574055 CCATGAAAACATATATGCAATCCGC 59.426 40.000 12.79 0.00 42.89 5.54
2716 3400 6.912082 TCCATGAAAACATATATGCAATCCG 58.088 36.000 12.79 3.19 0.00 4.18
2717 3401 9.715121 AAATCCATGAAAACATATATGCAATCC 57.285 29.630 12.79 0.01 0.00 3.01
2874 3602 9.413734 AGGAAATGAGGGAAATATAAGTTTCTG 57.586 33.333 0.00 0.00 38.02 3.02
2944 3897 1.337823 TGGTTGACTCGCCTTCTAAGC 60.338 52.381 0.00 0.00 0.00 3.09
2948 3901 2.341846 TTTTGGTTGACTCGCCTTCT 57.658 45.000 0.00 0.00 0.00 2.85
2949 3902 3.643159 AATTTTGGTTGACTCGCCTTC 57.357 42.857 0.00 0.00 0.00 3.46
3005 4795 9.893305 AAGATAAAAACAAATTAGTCAAGTCCG 57.107 29.630 0.00 0.00 0.00 4.79
3024 4814 9.900710 ACACGTTAATTTGCATGTTAAGATAAA 57.099 25.926 0.00 0.00 0.00 1.40
3025 4815 9.549509 GACACGTTAATTTGCATGTTAAGATAA 57.450 29.630 0.00 0.00 0.00 1.75
3026 4816 8.722394 TGACACGTTAATTTGCATGTTAAGATA 58.278 29.630 0.00 0.00 0.00 1.98
3027 4817 7.537306 GTGACACGTTAATTTGCATGTTAAGAT 59.463 33.333 0.00 0.00 0.00 2.40
3028 4818 6.853872 GTGACACGTTAATTTGCATGTTAAGA 59.146 34.615 0.00 0.00 0.00 2.10
3029 4819 6.087555 GGTGACACGTTAATTTGCATGTTAAG 59.912 38.462 0.00 3.37 0.00 1.85
3030 4820 5.915758 GGTGACACGTTAATTTGCATGTTAA 59.084 36.000 0.00 0.00 0.00 2.01
3031 4821 5.239744 AGGTGACACGTTAATTTGCATGTTA 59.760 36.000 0.00 0.00 0.00 2.41
3032 4822 4.037446 AGGTGACACGTTAATTTGCATGTT 59.963 37.500 0.00 0.00 0.00 2.71
3033 4823 3.568007 AGGTGACACGTTAATTTGCATGT 59.432 39.130 0.00 0.00 0.00 3.21
3034 4824 4.159377 AGGTGACACGTTAATTTGCATG 57.841 40.909 0.00 0.00 0.00 4.06
3035 4825 4.846779 AAGGTGACACGTTAATTTGCAT 57.153 36.364 11.67 0.00 0.00 3.96
3036 4826 5.752892 TTAAGGTGACACGTTAATTTGCA 57.247 34.783 23.02 6.58 34.66 4.08
3037 4827 7.966204 ACATATTAAGGTGACACGTTAATTTGC 59.034 33.333 34.29 11.88 42.83 3.68
3040 4830 9.101655 GGTACATATTAAGGTGACACGTTAATT 57.898 33.333 33.91 24.50 42.83 1.40
3041 4831 8.480501 AGGTACATATTAAGGTGACACGTTAAT 58.519 33.333 32.48 32.48 45.46 1.40
3042 4832 7.839907 AGGTACATATTAAGGTGACACGTTAA 58.160 34.615 26.81 26.81 41.00 2.01
3043 4833 7.408756 AGGTACATATTAAGGTGACACGTTA 57.591 36.000 15.01 15.01 0.00 3.18
3054 4844 8.700644 GTTTCTCATGCGTAGGTACATATTAAG 58.299 37.037 0.00 0.00 0.00 1.85
3056 4846 7.948357 AGTTTCTCATGCGTAGGTACATATTA 58.052 34.615 0.00 0.00 0.00 0.98
3057 4847 6.817184 AGTTTCTCATGCGTAGGTACATATT 58.183 36.000 0.00 0.00 0.00 1.28
3088 4878 8.548880 AAGTACTCCAGGAGTAGCATAATAAA 57.451 34.615 27.33 3.46 44.42 1.40
3093 4883 5.720041 ACAAAAGTACTCCAGGAGTAGCATA 59.280 40.000 27.33 7.25 44.42 3.14
3094 4884 4.532521 ACAAAAGTACTCCAGGAGTAGCAT 59.467 41.667 27.33 14.76 44.42 3.79
3095 4885 3.901844 ACAAAAGTACTCCAGGAGTAGCA 59.098 43.478 27.33 8.02 44.42 3.49
3096 4886 4.538746 ACAAAAGTACTCCAGGAGTAGC 57.461 45.455 27.33 20.76 44.42 3.58
3097 4887 6.097915 TGAACAAAAGTACTCCAGGAGTAG 57.902 41.667 27.33 17.93 44.42 2.57
3098 4888 6.488769 TTGAACAAAAGTACTCCAGGAGTA 57.511 37.500 23.68 23.68 41.51 2.59
3099 4889 5.367945 TTGAACAAAAGTACTCCAGGAGT 57.632 39.130 25.92 25.92 45.54 3.85
3100 4890 7.979444 TTATTGAACAAAAGTACTCCAGGAG 57.021 36.000 15.72 15.72 35.52 3.69
3101 4891 8.934023 ATTTATTGAACAAAAGTACTCCAGGA 57.066 30.769 0.00 0.00 0.00 3.86
3225 5063 2.158711 TCTAGATGATACCCGACCGTGT 60.159 50.000 0.00 0.00 0.00 4.49
3268 5170 6.738114 ACATGTGAACAAGACGAAATTTCAT 58.262 32.000 17.99 2.16 0.00 2.57
3271 5173 5.748152 CCAACATGTGAACAAGACGAAATTT 59.252 36.000 0.00 0.00 0.00 1.82
3308 5213 1.134848 GCCTCTCCTCAGCTACAACAG 60.135 57.143 0.00 0.00 0.00 3.16
3464 5369 3.420214 GAAGGTCATCGCCGGCGTA 62.420 63.158 44.16 31.71 40.74 4.42
3466 5371 4.514577 AGAAGGTCATCGCCGGCG 62.515 66.667 42.13 42.13 41.35 6.46
3494 5399 0.251354 GCAGGAGAAGATGGTGCTGA 59.749 55.000 0.00 0.00 34.22 4.26
3498 5406 2.562635 CTGATGCAGGAGAAGATGGTG 58.437 52.381 0.00 0.00 0.00 4.17
3515 5423 0.752054 CCCTTGTTGGCTTTTGCTGA 59.248 50.000 0.00 0.00 46.54 4.26
3530 5438 0.745845 GACATGCGTGATGAGCCCTT 60.746 55.000 14.17 0.00 35.80 3.95
3533 5441 1.003116 GAATGACATGCGTGATGAGCC 60.003 52.381 14.17 0.00 35.80 4.70
3563 5471 6.655003 CAGTTAACATGTAGGAACATTCACCT 59.345 38.462 8.61 0.00 44.07 4.00
3637 5549 6.542821 TCATGAGGAGTGGAGTGTTAATTTT 58.457 36.000 0.00 0.00 0.00 1.82
3640 5552 5.762179 TTCATGAGGAGTGGAGTGTTAAT 57.238 39.130 0.00 0.00 0.00 1.40
3649 5561 3.801698 CCTGTGTATTCATGAGGAGTGG 58.198 50.000 0.00 0.00 31.56 4.00
3727 5639 4.335647 AGCACTTGGTCCAGGCGG 62.336 66.667 0.00 0.00 0.00 6.13
3812 5724 6.900568 ATTGAGAGAGTGATTTTAGCTTCG 57.099 37.500 0.00 0.00 0.00 3.79
4235 6157 9.679596 CATTAAAAACGAAGATGATCAAAATGC 57.320 29.630 0.00 0.00 0.00 3.56
4341 6263 2.006888 CCATATGAACGTCACGCCTTT 58.993 47.619 3.65 0.00 0.00 3.11
4371 6293 3.244561 TGAAGAAGGTGGGAACTGTGATC 60.245 47.826 0.00 0.00 0.00 2.92
4497 6419 1.007618 GGTCAGGCCGACTATACGC 60.008 63.158 21.54 5.92 44.70 4.42
4553 6480 2.751259 GACCCCGATATATACTGCGACA 59.249 50.000 0.00 0.00 0.00 4.35
4651 6584 0.182775 GGGTGGCGGATTTAGGTCAT 59.817 55.000 0.00 0.00 0.00 3.06
4761 6700 2.740055 CGCTTCCTTGCTGCGTCT 60.740 61.111 0.00 0.00 44.00 4.18
5200 7178 2.430921 CTCGTGCTTCGGCTTCGT 60.431 61.111 2.56 0.00 42.37 3.85
5213 7191 2.355132 GTCGATGTACATGGAGTCTCGT 59.645 50.000 19.51 0.00 0.00 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.