Multiple sequence alignment - TraesCS2B01G128800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G128800 chr2B 100.000 5785 0 0 1 5785 96241339 96235555 0.000000e+00 10683.0
1 TraesCS2B01G128800 chr2B 89.101 2358 224 16 2975 5313 96103754 96101411 0.000000e+00 2900.0
2 TraesCS2B01G128800 chr2B 83.688 1551 219 24 3241 4785 96086123 96084601 0.000000e+00 1432.0
3 TraesCS2B01G128800 chr2B 86.883 1235 101 29 193 1396 96109564 96108360 0.000000e+00 1327.0
4 TraesCS2B01G128800 chr2B 90.338 859 55 11 1385 2230 96106796 96105953 0.000000e+00 1101.0
5 TraesCS2B01G128800 chr2B 88.592 561 57 4 787 1340 96089179 96088619 0.000000e+00 675.0
6 TraesCS2B01G128800 chr2B 88.578 464 45 7 2514 2972 96104320 96103860 1.820000e-154 556.0
7 TraesCS2B01G128800 chr2B 92.000 350 27 1 5324 5672 737235155 737234806 1.870000e-134 490.0
8 TraesCS2B01G128800 chr2B 92.766 235 15 2 2286 2518 96104971 96104737 7.180000e-89 339.0
9 TraesCS2B01G128800 chr2B 91.367 139 4 5 1 133 96109700 96109564 3.560000e-42 183.0
10 TraesCS2B01G128800 chr2B 79.487 117 19 5 5048 5161 561266091 561265977 1.730000e-10 78.7
11 TraesCS2B01G128800 chr2D 91.330 2226 127 22 1 2203 61347917 61345735 0.000000e+00 2981.0
12 TraesCS2B01G128800 chr2D 91.406 1920 150 10 2971 4884 61342356 61340446 0.000000e+00 2617.0
13 TraesCS2B01G128800 chr2D 82.732 1552 236 24 3241 4785 61316837 61315311 0.000000e+00 1352.0
14 TraesCS2B01G128800 chr2D 88.969 553 54 4 787 1332 61318650 61318098 0.000000e+00 676.0
15 TraesCS2B01G128800 chr2D 89.224 464 45 4 2514 2972 61342921 61342458 5.030000e-160 575.0
16 TraesCS2B01G128800 chr2D 92.086 139 8 2 2282 2417 61344920 61344782 5.920000e-45 193.0
17 TraesCS2B01G128800 chr2D 96.522 115 3 1 2404 2518 61343449 61343336 7.650000e-44 189.0
18 TraesCS2B01G128800 chr2D 95.652 46 2 0 2227 2272 61345682 61345637 2.240000e-09 75.0
19 TraesCS2B01G128800 chr2A 91.263 2083 141 23 3193 5242 61959957 61957883 0.000000e+00 2800.0
20 TraesCS2B01G128800 chr2A 89.683 1483 106 17 778 2230 61963078 61961613 0.000000e+00 1847.0
21 TraesCS2B01G128800 chr2A 83.126 1529 214 30 3241 4765 61810032 61808544 0.000000e+00 1354.0
22 TraesCS2B01G128800 chr2A 91.989 699 46 8 2280 2972 61960772 61960078 0.000000e+00 972.0
23 TraesCS2B01G128800 chr2A 89.350 554 52 4 787 1333 61817828 61817275 0.000000e+00 689.0
24 TraesCS2B01G128800 chr2A 89.942 517 37 11 251 754 61963869 61963355 0.000000e+00 652.0
25 TraesCS2B01G128800 chr2A 94.444 162 5 4 1 158 61964890 61964729 4.480000e-61 246.0
26 TraesCS2B01G128800 chr2A 88.696 115 12 1 5672 5785 61863960 61863846 7.820000e-29 139.0
27 TraesCS2B01G128800 chr2A 92.958 71 4 1 176 245 61963979 61963909 1.030000e-17 102.0
28 TraesCS2B01G128800 chr2A 97.826 46 1 0 2227 2272 61961589 61961544 4.810000e-11 80.5
29 TraesCS2B01G128800 chr2A 92.000 50 4 0 1832 1881 569285165 569285214 2.890000e-08 71.3
30 TraesCS2B01G128800 chr6B 91.460 363 28 3 5311 5672 452089134 452089494 4.030000e-136 496.0
31 TraesCS2B01G128800 chr7B 90.608 362 30 3 5314 5672 135534157 135534517 1.460000e-130 477.0
32 TraesCS2B01G128800 chr7B 90.556 360 31 3 5314 5672 599876348 599876705 1.890000e-129 473.0
33 TraesCS2B01G128800 chr7B 89.779 362 31 6 5314 5672 607323096 607322738 5.280000e-125 459.0
34 TraesCS2B01G128800 chr7B 97.143 35 1 0 1852 1886 186973980 186973946 6.260000e-05 60.2
35 TraesCS2B01G128800 chr4B 90.556 360 32 2 5314 5672 15844271 15844629 5.250000e-130 475.0
36 TraesCS2B01G128800 chr4B 90.331 362 29 5 5314 5672 498933401 498933759 2.440000e-128 470.0
37 TraesCS2B01G128800 chr4B 90.305 361 29 5 5314 5672 661616988 661616632 8.780000e-128 468.0
38 TraesCS2B01G128800 chr4A 90.305 361 32 3 5314 5672 650667082 650667441 2.440000e-128 470.0
39 TraesCS2B01G128800 chr1A 82.963 135 20 2 5048 5181 59130345 59130213 1.020000e-22 119.0
40 TraesCS2B01G128800 chr1D 84.483 116 13 2 5674 5784 273897921 273898036 6.130000e-20 110.0
41 TraesCS2B01G128800 chr3B 75.758 231 42 11 5048 5270 711066570 711066346 2.850000e-18 104.0
42 TraesCS2B01G128800 chr3B 75.598 209 37 12 5048 5248 710596339 710596541 2.220000e-14 91.6
43 TraesCS2B01G128800 chr3A 76.842 190 32 11 5048 5230 672591092 672591276 4.770000e-16 97.1
44 TraesCS2B01G128800 chr3D 80.508 118 17 5 5673 5785 554166067 554165951 1.030000e-12 86.1
45 TraesCS2B01G128800 chr3D 80.165 121 15 6 5669 5783 429720933 429720816 1.340000e-11 82.4
46 TraesCS2B01G128800 chr1B 90.164 61 5 1 5726 5785 373257447 373257507 1.730000e-10 78.7
47 TraesCS2B01G128800 chr7A 89.362 47 5 0 1841 1887 520447006 520447052 6.260000e-05 60.2
48 TraesCS2B01G128800 chr5B 97.143 35 0 1 5726 5760 34727316 34727283 2.250000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G128800 chr2B 96235555 96241339 5784 True 10683.000000 10683 100.000000 1 5785 1 chr2B.!!$R1 5784
1 TraesCS2B01G128800 chr2B 96101411 96109700 8289 True 1067.666667 2900 89.838833 1 5313 6 chr2B.!!$R5 5312
2 TraesCS2B01G128800 chr2B 96084601 96089179 4578 True 1053.500000 1432 86.140000 787 4785 2 chr2B.!!$R4 3998
3 TraesCS2B01G128800 chr2D 61340446 61347917 7471 True 1105.000000 2981 92.703333 1 4884 6 chr2D.!!$R2 4883
4 TraesCS2B01G128800 chr2D 61315311 61318650 3339 True 1014.000000 1352 85.850500 787 4785 2 chr2D.!!$R1 3998
5 TraesCS2B01G128800 chr2A 61808544 61810032 1488 True 1354.000000 1354 83.126000 3241 4765 1 chr2A.!!$R1 1524
6 TraesCS2B01G128800 chr2A 61957883 61964890 7007 True 957.071429 2800 92.586429 1 5242 7 chr2A.!!$R4 5241
7 TraesCS2B01G128800 chr2A 61817275 61817828 553 True 689.000000 689 89.350000 787 1333 1 chr2A.!!$R2 546

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
735 1520 0.818040 GGTTGCCGTCAGAAGGTTGT 60.818 55.000 4.13 0.00 0.00 3.32 F
785 1829 1.083806 ATATATGCGCATGCCCGACG 61.084 55.000 32.48 0.00 41.78 5.12 F
2106 4865 1.306148 GTACTAATTTGAGCGCCCCC 58.694 55.000 2.29 0.00 0.00 5.40 F
2211 4971 0.449388 GTGTGCATAGCTGTTCAGCC 59.551 55.000 19.28 6.52 34.90 4.85 F
2973 9110 1.191647 GTAGGAGTTCAAACGTGTGCG 59.808 52.381 0.00 0.00 44.93 5.34 F
3000 9137 1.328680 GTAGAATGTCAGCATGCACCG 59.671 52.381 21.98 8.00 32.93 4.94 F
3228 9365 2.505407 TCACTTGGATATGTCTGGGGTG 59.495 50.000 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1898 4650 0.679640 TGGCGAACATGATTGGACCC 60.680 55.000 0.00 0.00 0.00 4.46 R
2114 4873 1.083489 TATTGCTTTTCCACGCGGAG 58.917 50.000 12.47 1.64 44.10 4.63 R
3708 9850 0.898789 AGTACACGGTCACCCTCCTG 60.899 60.000 0.00 0.00 0.00 3.86 R
3721 9863 2.349532 GCTTGCCTTCGTTGAAGTACAC 60.350 50.000 5.88 0.00 37.92 2.90 R
4237 10411 1.270518 CGGAGATGAGGCCCAAGTATG 60.271 57.143 0.00 0.00 0.00 2.39 R
4289 10463 5.348997 GTGTTCTATTCCTCTTTGAAGTCCG 59.651 44.000 0.00 0.00 0.00 4.79 R
5128 11316 0.398664 TTAGCTAGTCCAGAGGCCCC 60.399 60.000 0.00 0.00 0.00 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
280 1030 9.280174 TGGTTAGTTCAAATCTAAAGTAACTGG 57.720 33.333 10.81 0.00 39.54 4.00
450 1228 6.620678 AGTGTTCAATAAAATTCCGATGTGG 58.379 36.000 0.00 0.00 40.09 4.17
537 1319 4.508124 CGCTATGTGTCTTCTTCCCATAAC 59.492 45.833 0.00 0.00 0.00 1.89
635 1417 6.535508 ACGTTTCTCCTTTACTTATGATCTGC 59.464 38.462 0.00 0.00 0.00 4.26
735 1520 0.818040 GGTTGCCGTCAGAAGGTTGT 60.818 55.000 4.13 0.00 0.00 3.32
760 1550 1.541670 GCAACCTCCGTAAGTTCCACA 60.542 52.381 0.00 0.00 0.00 4.17
761 1551 2.874457 GCAACCTCCGTAAGTTCCACAT 60.874 50.000 0.00 0.00 0.00 3.21
762 1552 3.618019 GCAACCTCCGTAAGTTCCACATA 60.618 47.826 0.00 0.00 0.00 2.29
763 1553 4.766375 CAACCTCCGTAAGTTCCACATAT 58.234 43.478 0.00 0.00 0.00 1.78
764 1554 5.682990 GCAACCTCCGTAAGTTCCACATATA 60.683 44.000 0.00 0.00 0.00 0.86
765 1555 6.522054 CAACCTCCGTAAGTTCCACATATAT 58.478 40.000 0.00 0.00 0.00 0.86
766 1556 7.663827 CAACCTCCGTAAGTTCCACATATATA 58.336 38.462 0.00 0.00 0.00 0.86
767 1557 8.311836 CAACCTCCGTAAGTTCCACATATATAT 58.688 37.037 0.00 0.00 0.00 0.86
785 1829 1.083806 ATATATGCGCATGCCCGACG 61.084 55.000 32.48 0.00 41.78 5.12
873 1924 3.669536 TGAAATGAAGGCGTATGTGACA 58.330 40.909 0.00 0.00 0.00 3.58
930 1981 4.436998 GCGGTGCACTACTCGGCT 62.437 66.667 17.98 0.00 35.79 5.52
966 2017 4.373116 TCCTTGACGCCGGCTGAC 62.373 66.667 26.68 18.04 0.00 3.51
982 2033 1.971167 GACAAGCGGTCATTGGCCA 60.971 57.895 0.00 0.00 46.19 5.36
1017 2068 2.363276 ATGGGACTCGCCACGGTA 60.363 61.111 0.00 0.00 38.95 4.02
1182 2233 2.108514 CCACGTCATGAGCCGCATT 61.109 57.895 0.00 0.00 34.15 3.56
1185 2236 2.466982 CGTCATGAGCCGCATTGCT 61.467 57.895 7.12 0.00 46.37 3.91
1435 4089 8.671921 CATATCTAGTTCAATGTTGTGAAAGCT 58.328 33.333 0.00 0.00 39.18 3.74
1623 4320 2.507886 TCAGGACAGAGAAACCAAACCA 59.492 45.455 0.00 0.00 0.00 3.67
1673 4423 2.288666 GATAAATTCAGCCGCCAGTGA 58.711 47.619 0.00 0.00 0.00 3.41
1762 4512 2.364970 CCAAACCAAACAGATGCCTTCA 59.635 45.455 0.00 0.00 0.00 3.02
1872 4624 7.839907 AGCAAATGTTAGATTTTTAGGCATGA 58.160 30.769 0.00 0.00 0.00 3.07
1879 4631 7.967854 TGTTAGATTTTTAGGCATGACAAATCG 59.032 33.333 14.08 0.00 38.39 3.34
1884 4636 5.895636 TTTAGGCATGACAAATCGAACAT 57.104 34.783 0.00 0.00 0.00 2.71
1887 4639 5.895636 AGGCATGACAAATCGAACATTTA 57.104 34.783 0.00 0.00 0.00 1.40
1888 4640 5.883661 AGGCATGACAAATCGAACATTTAG 58.116 37.500 0.00 0.00 0.00 1.85
1889 4641 4.500477 GGCATGACAAATCGAACATTTAGC 59.500 41.667 0.00 0.00 0.00 3.09
1890 4642 5.335127 GCATGACAAATCGAACATTTAGCT 58.665 37.500 0.00 0.00 0.00 3.32
1891 4643 5.228635 GCATGACAAATCGAACATTTAGCTG 59.771 40.000 0.00 0.00 0.00 4.24
1892 4644 6.545508 CATGACAAATCGAACATTTAGCTGA 58.454 36.000 0.00 0.00 0.00 4.26
1893 4645 6.741992 TGACAAATCGAACATTTAGCTGAT 57.258 33.333 0.00 0.00 0.00 2.90
1894 4646 7.841915 TGACAAATCGAACATTTAGCTGATA 57.158 32.000 0.00 0.00 0.00 2.15
1898 4650 8.064222 ACAAATCGAACATTTAGCTGATATTCG 58.936 33.333 15.15 15.15 38.96 3.34
1900 4652 4.988540 TCGAACATTTAGCTGATATTCGGG 59.011 41.667 18.84 0.89 38.33 5.14
1901 4653 4.750098 CGAACATTTAGCTGATATTCGGGT 59.250 41.667 14.06 0.00 37.27 5.28
1903 4655 4.642429 ACATTTAGCTGATATTCGGGTCC 58.358 43.478 0.00 0.00 34.89 4.46
1907 4659 3.409026 AGCTGATATTCGGGTCCAATC 57.591 47.619 0.00 0.00 0.00 2.67
1994 4752 2.159435 GGAAATCGCCGTGCTTACAAAT 60.159 45.455 0.00 0.00 0.00 2.32
2052 4811 6.865726 CCATGAAAAATGTTCGATTTACCACA 59.134 34.615 0.00 0.00 0.00 4.17
2106 4865 1.306148 GTACTAATTTGAGCGCCCCC 58.694 55.000 2.29 0.00 0.00 5.40
2129 4889 3.431725 CCCTCCGCGTGGAAAAGC 61.432 66.667 20.06 0.00 45.87 3.51
2182 4942 5.167303 AGACATCTCCACTTTTAACCTCC 57.833 43.478 0.00 0.00 0.00 4.30
2211 4971 0.449388 GTGTGCATAGCTGTTCAGCC 59.551 55.000 19.28 6.52 34.90 4.85
2272 5170 7.282450 GGTAAAATCTCGAGATATTTTGGTGGT 59.718 37.037 27.52 5.74 36.31 4.16
2273 5171 9.321562 GTAAAATCTCGAGATATTTTGGTGGTA 57.678 33.333 27.52 7.94 36.31 3.25
2275 5173 8.801882 AAATCTCGAGATATTTTGGTGGTAAA 57.198 30.769 27.52 0.00 33.73 2.01
2276 5174 8.801882 AATCTCGAGATATTTTGGTGGTAAAA 57.198 30.769 27.52 0.00 33.73 1.52
2278 5176 8.433421 TCTCGAGATATTTTGGTGGTAAAATC 57.567 34.615 12.08 0.00 39.96 2.17
2528 8205 6.287107 AGCACGTACAATATTGACTAATGC 57.713 37.500 22.16 20.40 0.00 3.56
2560 8238 2.688507 ACAAGTACCACATCAAGAGCG 58.311 47.619 0.00 0.00 0.00 5.03
2666 8450 4.157246 ACTGCCTATGATACCCGAATACA 58.843 43.478 0.00 0.00 0.00 2.29
2670 8454 4.689345 GCCTATGATACCCGAATACAACAC 59.311 45.833 0.00 0.00 0.00 3.32
2694 8478 6.158695 ACACAACTATAGTTCCAATCCATCCT 59.841 38.462 15.35 0.00 35.83 3.24
2726 8513 3.290948 TTGGTTGTAGCAAGAACCTGT 57.709 42.857 10.91 0.00 46.72 4.00
2752 8539 1.537202 CTTGCAACCCACAGCTACTTC 59.463 52.381 0.00 0.00 0.00 3.01
2823 8610 1.449726 TTCTCGCCATGGCATCATGC 61.450 55.000 34.93 0.00 47.00 4.06
2832 8619 2.530460 TGGCATCATGCTTAAAGGGT 57.470 45.000 10.11 0.00 44.28 4.34
2973 9110 1.191647 GTAGGAGTTCAAACGTGTGCG 59.808 52.381 0.00 0.00 44.93 5.34
2986 9123 3.079960 CGTGTGCGTATGAGGTAGAAT 57.920 47.619 0.00 0.00 0.00 2.40
2992 9129 3.053455 GCGTATGAGGTAGAATGTCAGC 58.947 50.000 0.00 0.00 0.00 4.26
2994 9131 4.797604 GCGTATGAGGTAGAATGTCAGCAT 60.798 45.833 0.00 0.00 36.80 3.79
2995 9132 4.683320 CGTATGAGGTAGAATGTCAGCATG 59.317 45.833 0.00 0.00 35.15 4.06
3000 9137 1.328680 GTAGAATGTCAGCATGCACCG 59.671 52.381 21.98 8.00 32.93 4.94
3018 9155 5.184096 TGCACCGGTAACATCAAAATTGTAT 59.816 36.000 6.87 0.00 0.00 2.29
3147 9284 4.931002 GCTTGTGAACCATTTATGCACATT 59.069 37.500 0.00 0.00 39.00 2.71
3151 9288 9.800433 CTTGTGAACCATTTATGCACATTTATA 57.200 29.630 0.00 0.00 39.00 0.98
3221 9358 9.039870 CAGAAGATACTTTCACTTGGATATGTC 57.960 37.037 0.00 0.00 0.00 3.06
3228 9365 2.505407 TCACTTGGATATGTCTGGGGTG 59.495 50.000 0.00 0.00 0.00 4.61
3384 9525 7.827819 TCACTTCTTAAGGATGATAAACACG 57.172 36.000 1.85 0.00 0.00 4.49
3401 9542 3.660865 ACACGGACTTTGAGGTATGAAC 58.339 45.455 0.00 0.00 0.00 3.18
3422 9563 4.008330 ACATGATCTCTCAAGGCTTTGTG 58.992 43.478 8.56 6.37 34.37 3.33
3435 9576 5.200368 AGGCTTTGTGTTTTTGTATGGAG 57.800 39.130 0.00 0.00 0.00 3.86
3462 9603 7.562454 TTTAACTCGAGTGAAATTGAAAGGT 57.438 32.000 21.94 3.58 0.00 3.50
3467 9608 6.369065 ACTCGAGTGAAATTGAAAGGTGTATC 59.631 38.462 19.30 0.00 0.00 2.24
3601 9742 4.947645 TGAAATGGAAGCAAGGAAAACAG 58.052 39.130 0.00 0.00 0.00 3.16
3608 9749 3.626028 AGCAAGGAAAACAGTTAAGCG 57.374 42.857 0.00 0.00 0.00 4.68
3622 9763 5.221581 ACAGTTAAGCGGGTCTCTTCTTTAA 60.222 40.000 0.00 0.00 0.00 1.52
3632 9773 6.877322 CGGGTCTCTTCTTTAAATGGACTAAA 59.123 38.462 0.00 0.00 0.00 1.85
3708 9850 4.109050 TGCGTCTCCATTGTTTTTGTTTC 58.891 39.130 0.00 0.00 0.00 2.78
3786 9928 5.643379 TGTCCTAACCAAAAGATCAATGC 57.357 39.130 0.00 0.00 0.00 3.56
3809 9951 6.041979 TGCTTAACATGCATAGAGACATAGGA 59.958 38.462 0.00 0.00 35.31 2.94
3976 10145 6.413783 TCAACAGGTTGACATACTACTCAA 57.586 37.500 10.63 0.00 43.90 3.02
3978 10147 7.450074 TCAACAGGTTGACATACTACTCAATT 58.550 34.615 10.63 0.00 43.90 2.32
4053 10226 2.720915 TGACAATGATGGCAATCGGAA 58.279 42.857 0.00 0.00 43.21 4.30
4085 10258 6.724893 TCATTTGTCGAGGATATGAAGGTA 57.275 37.500 0.00 0.00 0.00 3.08
4237 10411 3.550842 GCCAACACACTTTCATCAACTCC 60.551 47.826 0.00 0.00 0.00 3.85
4289 10463 5.163561 TGCTGCAATTGCTTATTACCTAACC 60.164 40.000 29.37 0.00 42.66 2.85
4406 10580 3.877508 CCATTGTACCCGATTTTCTCCTC 59.122 47.826 0.00 0.00 0.00 3.71
4669 10843 2.233186 AGTTAGGTTACTCGAAGTGGGC 59.767 50.000 0.00 0.00 0.00 5.36
4807 10981 5.871396 TGATACCTTGTCTATGAAGGGTC 57.129 43.478 0.00 0.00 43.88 4.46
4811 10985 4.652822 ACCTTGTCTATGAAGGGTCAAAC 58.347 43.478 0.00 0.00 43.88 2.93
4817 10991 5.546499 TGTCTATGAAGGGTCAAACTAGGTT 59.454 40.000 0.00 0.00 37.30 3.50
4867 11041 7.230510 TGTTGTTTGCCATATTTGTAAGAGACT 59.769 33.333 0.00 0.00 0.00 3.24
4976 11163 4.600062 ACTCACAGGGTTTGAAACTCTTT 58.400 39.130 7.90 0.00 39.87 2.52
4987 11174 9.325198 GGGTTTGAAACTCTTTTTGAAATATGT 57.675 29.630 8.09 0.00 0.00 2.29
4996 11183 8.826765 ACTCTTTTTGAAATATGTCCTAGAGGA 58.173 33.333 11.94 0.00 43.08 3.71
5011 11198 7.448748 TCCTAGAGGAAATTACAAAAGTTGC 57.551 36.000 0.00 0.00 42.18 4.17
5014 11201 8.451748 CCTAGAGGAAATTACAAAAGTTGCTAC 58.548 37.037 0.00 0.00 40.73 3.58
5109 11297 6.024552 AGTTGCATCCGTTGAAACATAAAT 57.975 33.333 8.65 0.00 45.22 1.40
5111 11299 4.172505 TGCATCCGTTGAAACATAAATGC 58.827 39.130 0.00 0.00 0.00 3.56
5128 11316 7.231317 ACATAAATGCCAAACATATCCCTAGTG 59.769 37.037 0.00 0.00 38.34 2.74
5165 11353 9.726438 ACTAGCTAATGTATTATTGATGGTTCC 57.274 33.333 0.00 0.00 0.00 3.62
5166 11354 9.725019 CTAGCTAATGTATTATTGATGGTTCCA 57.275 33.333 0.00 0.00 0.00 3.53
5190 11378 5.341872 TTTCTTGACCATGGGCATTATTG 57.658 39.130 24.29 9.77 0.00 1.90
5208 11396 3.500448 TTGATGTAACAAGGGTGCTCA 57.500 42.857 0.00 0.00 0.00 4.26
5209 11397 3.719268 TGATGTAACAAGGGTGCTCAT 57.281 42.857 0.00 0.00 0.00 2.90
5287 11475 6.406370 TGAAATACAATGAGATCAGGTCGTT 58.594 36.000 0.00 0.00 0.00 3.85
5288 11476 6.878923 TGAAATACAATGAGATCAGGTCGTTT 59.121 34.615 0.00 0.00 0.00 3.60
5289 11477 6.668541 AATACAATGAGATCAGGTCGTTTG 57.331 37.500 0.00 0.00 0.00 2.93
5294 11482 4.123497 TGAGATCAGGTCGTTTGTATGG 57.877 45.455 0.00 0.00 0.00 2.74
5295 11483 3.513912 TGAGATCAGGTCGTTTGTATGGT 59.486 43.478 0.00 0.00 0.00 3.55
5296 11484 4.707934 TGAGATCAGGTCGTTTGTATGGTA 59.292 41.667 0.00 0.00 0.00 3.25
5300 11488 3.120792 CAGGTCGTTTGTATGGTATCGG 58.879 50.000 0.00 0.00 0.00 4.18
5335 11523 3.804786 TTTTTGAAAAGGGGGTTCGTC 57.195 42.857 0.00 0.00 0.00 4.20
5336 11524 1.694844 TTTGAAAAGGGGGTTCGTCC 58.305 50.000 0.00 0.00 0.00 4.79
5345 11533 4.452733 GGTTCGTCCCGGCCTCTG 62.453 72.222 0.00 0.00 0.00 3.35
5349 11537 4.899239 CGTCCCGGCCTCTGCATC 62.899 72.222 0.00 0.00 40.13 3.91
5350 11538 3.785859 GTCCCGGCCTCTGCATCA 61.786 66.667 0.00 0.00 40.13 3.07
5351 11539 3.473647 TCCCGGCCTCTGCATCAG 61.474 66.667 0.00 0.00 40.13 2.90
5352 11540 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
5353 11541 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
5354 11542 1.078214 CCGGCCTCTGCATCAGAAA 60.078 57.895 0.00 0.00 40.18 2.52
5355 11543 1.094073 CCGGCCTCTGCATCAGAAAG 61.094 60.000 0.00 0.00 40.18 2.62
5356 11544 0.107993 CGGCCTCTGCATCAGAAAGA 60.108 55.000 0.00 0.00 40.18 2.52
5357 11545 1.474677 CGGCCTCTGCATCAGAAAGAT 60.475 52.381 0.00 0.00 40.18 2.40
5367 11555 4.722203 CATCAGAAAGATGCATACGACC 57.278 45.455 0.00 0.00 46.90 4.79
5368 11556 3.885724 TCAGAAAGATGCATACGACCA 57.114 42.857 0.00 0.00 0.00 4.02
5369 11557 4.406648 TCAGAAAGATGCATACGACCAT 57.593 40.909 0.00 0.00 0.00 3.55
5370 11558 5.529581 TCAGAAAGATGCATACGACCATA 57.470 39.130 0.00 0.00 0.00 2.74
5371 11559 6.101650 TCAGAAAGATGCATACGACCATAT 57.898 37.500 0.00 0.00 0.00 1.78
5372 11560 6.524734 TCAGAAAGATGCATACGACCATATT 58.475 36.000 0.00 0.00 0.00 1.28
5373 11561 7.666623 TCAGAAAGATGCATACGACCATATTA 58.333 34.615 0.00 0.00 0.00 0.98
5374 11562 8.314021 TCAGAAAGATGCATACGACCATATTAT 58.686 33.333 0.00 0.00 0.00 1.28
5375 11563 8.939929 CAGAAAGATGCATACGACCATATTATT 58.060 33.333 0.00 0.00 0.00 1.40
5402 11590 8.721133 AAAATTAAAAGGTCCAACATAGGTCT 57.279 30.769 0.00 0.00 0.00 3.85
5403 11591 7.939784 AATTAAAAGGTCCAACATAGGTCTC 57.060 36.000 0.00 0.00 0.00 3.36
5404 11592 3.611766 AAAGGTCCAACATAGGTCTCG 57.388 47.619 0.00 0.00 0.00 4.04
5405 11593 1.486211 AGGTCCAACATAGGTCTCGG 58.514 55.000 0.00 0.00 0.00 4.63
5406 11594 1.006758 AGGTCCAACATAGGTCTCGGA 59.993 52.381 0.00 0.00 0.00 4.55
5407 11595 1.409427 GGTCCAACATAGGTCTCGGAG 59.591 57.143 0.00 0.00 0.00 4.63
5408 11596 2.100989 GTCCAACATAGGTCTCGGAGT 58.899 52.381 4.69 0.00 0.00 3.85
5409 11597 2.099427 GTCCAACATAGGTCTCGGAGTC 59.901 54.545 4.69 0.00 0.00 3.36
5410 11598 2.025226 TCCAACATAGGTCTCGGAGTCT 60.025 50.000 4.69 6.85 0.00 3.24
5411 11599 2.359531 CCAACATAGGTCTCGGAGTCTC 59.640 54.545 4.69 0.00 0.00 3.36
5412 11600 3.017442 CAACATAGGTCTCGGAGTCTCA 58.983 50.000 4.69 0.00 0.00 3.27
5413 11601 3.367646 ACATAGGTCTCGGAGTCTCAA 57.632 47.619 4.69 0.00 0.00 3.02
5414 11602 3.698289 ACATAGGTCTCGGAGTCTCAAA 58.302 45.455 4.69 0.00 0.00 2.69
5415 11603 3.444388 ACATAGGTCTCGGAGTCTCAAAC 59.556 47.826 4.69 0.00 0.00 2.93
5416 11604 1.996798 AGGTCTCGGAGTCTCAAACA 58.003 50.000 4.69 0.00 0.00 2.83
5417 11605 2.317040 AGGTCTCGGAGTCTCAAACAA 58.683 47.619 4.69 0.00 0.00 2.83
5418 11606 2.698797 AGGTCTCGGAGTCTCAAACAAA 59.301 45.455 4.69 0.00 0.00 2.83
5419 11607 3.134081 AGGTCTCGGAGTCTCAAACAAAA 59.866 43.478 4.69 0.00 0.00 2.44
5420 11608 3.875134 GGTCTCGGAGTCTCAAACAAAAA 59.125 43.478 4.69 0.00 0.00 1.94
5421 11609 4.024809 GGTCTCGGAGTCTCAAACAAAAAG 60.025 45.833 4.69 0.00 0.00 2.27
5422 11610 4.024809 GTCTCGGAGTCTCAAACAAAAAGG 60.025 45.833 4.69 0.00 0.00 3.11
5423 11611 4.127171 CTCGGAGTCTCAAACAAAAAGGA 58.873 43.478 1.47 0.00 0.00 3.36
5424 11612 4.519213 TCGGAGTCTCAAACAAAAAGGAA 58.481 39.130 1.47 0.00 0.00 3.36
5425 11613 4.334481 TCGGAGTCTCAAACAAAAAGGAAC 59.666 41.667 1.47 0.00 0.00 3.62
5426 11614 4.095782 CGGAGTCTCAAACAAAAAGGAACA 59.904 41.667 1.47 0.00 0.00 3.18
5427 11615 5.392595 CGGAGTCTCAAACAAAAAGGAACAA 60.393 40.000 1.47 0.00 0.00 2.83
5428 11616 6.394809 GGAGTCTCAAACAAAAAGGAACAAA 58.605 36.000 1.47 0.00 0.00 2.83
5429 11617 7.041721 GGAGTCTCAAACAAAAAGGAACAAAT 58.958 34.615 1.47 0.00 0.00 2.32
5430 11618 7.010460 GGAGTCTCAAACAAAAAGGAACAAATG 59.990 37.037 1.47 0.00 0.00 2.32
5431 11619 6.313658 AGTCTCAAACAAAAAGGAACAAATGC 59.686 34.615 0.00 0.00 0.00 3.56
5432 11620 6.313658 GTCTCAAACAAAAAGGAACAAATGCT 59.686 34.615 0.00 0.00 0.00 3.79
5433 11621 6.534793 TCTCAAACAAAAAGGAACAAATGCTC 59.465 34.615 0.00 0.00 0.00 4.26
5434 11622 6.169094 TCAAACAAAAAGGAACAAATGCTCA 58.831 32.000 0.00 0.00 0.00 4.26
5435 11623 6.652481 TCAAACAAAAAGGAACAAATGCTCAA 59.348 30.769 0.00 0.00 0.00 3.02
5436 11624 7.173907 TCAAACAAAAAGGAACAAATGCTCAAA 59.826 29.630 0.00 0.00 0.00 2.69
5437 11625 7.446001 AACAAAAAGGAACAAATGCTCAAAA 57.554 28.000 0.00 0.00 0.00 2.44
5438 11626 7.446001 ACAAAAAGGAACAAATGCTCAAAAA 57.554 28.000 0.00 0.00 0.00 1.94
5439 11627 7.529158 ACAAAAAGGAACAAATGCTCAAAAAG 58.471 30.769 0.00 0.00 0.00 2.27
5440 11628 7.390162 ACAAAAAGGAACAAATGCTCAAAAAGA 59.610 29.630 0.00 0.00 0.00 2.52
5451 11639 3.338818 CTCAAAAAGAGCACGAAAGCA 57.661 42.857 0.00 0.00 37.59 3.91
5452 11640 3.694734 CTCAAAAAGAGCACGAAAGCAA 58.305 40.909 0.00 0.00 37.59 3.91
5453 11641 4.103365 TCAAAAAGAGCACGAAAGCAAA 57.897 36.364 0.00 0.00 36.85 3.68
5454 11642 4.489810 TCAAAAAGAGCACGAAAGCAAAA 58.510 34.783 0.00 0.00 36.85 2.44
5455 11643 4.926238 TCAAAAAGAGCACGAAAGCAAAAA 59.074 33.333 0.00 0.00 36.85 1.94
5473 11661 3.866883 AAAACAGGACAACCACAACTG 57.133 42.857 0.00 0.00 38.94 3.16
5474 11662 1.762708 AACAGGACAACCACAACTGG 58.237 50.000 0.00 0.00 44.26 4.00
5475 11663 0.751643 ACAGGACAACCACAACTGGC 60.752 55.000 0.00 0.00 42.08 4.85
5476 11664 0.751277 CAGGACAACCACAACTGGCA 60.751 55.000 0.00 0.00 42.08 4.92
5477 11665 0.466189 AGGACAACCACAACTGGCAG 60.466 55.000 14.16 14.16 42.08 4.85
5478 11666 1.455383 GGACAACCACAACTGGCAGG 61.455 60.000 20.34 3.51 42.08 4.85
5479 11667 2.075426 GACAACCACAACTGGCAGGC 62.075 60.000 20.34 0.00 42.08 4.85
5480 11668 2.126596 CAACCACAACTGGCAGGCA 61.127 57.895 20.34 0.00 42.08 4.75
5481 11669 1.381056 AACCACAACTGGCAGGCAA 60.381 52.632 20.34 0.00 42.08 4.52
5482 11670 0.975040 AACCACAACTGGCAGGCAAA 60.975 50.000 20.34 0.00 42.08 3.68
5483 11671 0.975040 ACCACAACTGGCAGGCAAAA 60.975 50.000 20.34 0.00 42.08 2.44
5484 11672 0.393820 CCACAACTGGCAGGCAAAAT 59.606 50.000 20.34 0.00 0.00 1.82
5485 11673 1.617850 CCACAACTGGCAGGCAAAATA 59.382 47.619 20.34 0.00 0.00 1.40
5486 11674 2.036992 CCACAACTGGCAGGCAAAATAA 59.963 45.455 20.34 0.00 0.00 1.40
5487 11675 3.059166 CACAACTGGCAGGCAAAATAAC 58.941 45.455 20.34 0.00 0.00 1.89
5488 11676 2.697751 ACAACTGGCAGGCAAAATAACA 59.302 40.909 20.34 0.00 0.00 2.41
5489 11677 3.324556 ACAACTGGCAGGCAAAATAACAT 59.675 39.130 20.34 0.00 0.00 2.71
5490 11678 4.526262 ACAACTGGCAGGCAAAATAACATA 59.474 37.500 20.34 0.00 0.00 2.29
5491 11679 5.187576 ACAACTGGCAGGCAAAATAACATAT 59.812 36.000 20.34 0.00 0.00 1.78
5492 11680 6.379703 ACAACTGGCAGGCAAAATAACATATA 59.620 34.615 20.34 0.00 0.00 0.86
5493 11681 6.639632 ACTGGCAGGCAAAATAACATATAG 57.360 37.500 20.34 0.00 0.00 1.31
5494 11682 5.536161 ACTGGCAGGCAAAATAACATATAGG 59.464 40.000 20.34 0.00 0.00 2.57
5495 11683 5.700183 TGGCAGGCAAAATAACATATAGGA 58.300 37.500 0.00 0.00 0.00 2.94
5496 11684 6.132658 TGGCAGGCAAAATAACATATAGGAA 58.867 36.000 0.00 0.00 0.00 3.36
5497 11685 6.609212 TGGCAGGCAAAATAACATATAGGAAA 59.391 34.615 0.00 0.00 0.00 3.13
5498 11686 6.923508 GGCAGGCAAAATAACATATAGGAAAC 59.076 38.462 0.00 0.00 0.00 2.78
5525 11713 6.466885 ACACCTATCCTATTATATGACCGC 57.533 41.667 0.00 0.00 0.00 5.68
5526 11714 5.363005 ACACCTATCCTATTATATGACCGCC 59.637 44.000 0.00 0.00 0.00 6.13
5527 11715 5.362717 CACCTATCCTATTATATGACCGCCA 59.637 44.000 0.00 0.00 0.00 5.69
5528 11716 6.042093 CACCTATCCTATTATATGACCGCCAT 59.958 42.308 0.00 0.00 39.25 4.40
5529 11717 6.267928 ACCTATCCTATTATATGACCGCCATC 59.732 42.308 0.00 0.00 36.71 3.51
5530 11718 5.552870 ATCCTATTATATGACCGCCATCC 57.447 43.478 0.00 0.00 36.71 3.51
5531 11719 4.358214 TCCTATTATATGACCGCCATCCA 58.642 43.478 0.00 0.00 36.71 3.41
5532 11720 4.780554 TCCTATTATATGACCGCCATCCAA 59.219 41.667 0.00 0.00 36.71 3.53
5533 11721 5.249622 TCCTATTATATGACCGCCATCCAAA 59.750 40.000 0.00 0.00 36.71 3.28
5534 11722 5.354234 CCTATTATATGACCGCCATCCAAAC 59.646 44.000 0.00 0.00 36.71 2.93
5535 11723 1.981256 ATATGACCGCCATCCAAACC 58.019 50.000 0.00 0.00 36.71 3.27
5536 11724 0.462937 TATGACCGCCATCCAAACCG 60.463 55.000 0.00 0.00 36.71 4.44
5537 11725 3.131478 GACCGCCATCCAAACCGG 61.131 66.667 0.00 0.00 45.80 5.28
5539 11727 2.675075 CCGCCATCCAAACCGGTT 60.675 61.111 15.86 15.86 36.18 4.44
5540 11728 2.566010 CGCCATCCAAACCGGTTG 59.434 61.111 23.08 14.70 36.94 3.77
5541 11729 1.969064 CGCCATCCAAACCGGTTGA 60.969 57.895 23.08 15.50 39.87 3.18
5542 11730 1.519751 CGCCATCCAAACCGGTTGAA 61.520 55.000 23.08 9.90 39.87 2.69
5543 11731 0.243636 GCCATCCAAACCGGTTGAAG 59.756 55.000 23.08 13.88 39.87 3.02
5544 11732 1.904287 CCATCCAAACCGGTTGAAGA 58.096 50.000 23.08 17.89 39.87 2.87
5545 11733 2.446435 CCATCCAAACCGGTTGAAGAT 58.554 47.619 23.08 19.33 39.87 2.40
5546 11734 3.616219 CCATCCAAACCGGTTGAAGATA 58.384 45.455 23.08 4.03 39.87 1.98
5547 11735 3.627577 CCATCCAAACCGGTTGAAGATAG 59.372 47.826 23.08 12.36 39.87 2.08
5548 11736 2.706890 TCCAAACCGGTTGAAGATAGC 58.293 47.619 23.08 0.00 39.87 2.97
5549 11737 1.743394 CCAAACCGGTTGAAGATAGCC 59.257 52.381 23.08 0.00 39.87 3.93
5550 11738 1.743394 CAAACCGGTTGAAGATAGCCC 59.257 52.381 23.08 0.00 39.87 5.19
5551 11739 0.107848 AACCGGTTGAAGATAGCCCG 60.108 55.000 21.56 0.00 38.39 6.13
5552 11740 1.262640 ACCGGTTGAAGATAGCCCGT 61.263 55.000 0.00 0.00 36.98 5.28
5553 11741 0.810031 CCGGTTGAAGATAGCCCGTG 60.810 60.000 0.00 0.00 36.98 4.94
5554 11742 1.429148 CGGTTGAAGATAGCCCGTGC 61.429 60.000 0.00 0.00 34.10 5.34
5564 11752 4.509737 GCCCGTGCTACCGTCTCC 62.510 72.222 0.00 0.00 33.53 3.71
5565 11753 3.834799 CCCGTGCTACCGTCTCCC 61.835 72.222 0.00 0.00 0.00 4.30
5566 11754 3.066190 CCGTGCTACCGTCTCCCA 61.066 66.667 0.00 0.00 0.00 4.37
5567 11755 2.423898 CCGTGCTACCGTCTCCCAT 61.424 63.158 0.00 0.00 0.00 4.00
5568 11756 1.065928 CGTGCTACCGTCTCCCATC 59.934 63.158 0.00 0.00 0.00 3.51
5569 11757 1.065928 GTGCTACCGTCTCCCATCG 59.934 63.158 0.00 0.00 0.00 3.84
5578 11766 1.746220 CGTCTCCCATCGGATAGATCC 59.254 57.143 0.00 0.00 43.65 3.36
5591 11779 5.948992 GGATAGATCCAGTAACCAAATGC 57.051 43.478 3.54 0.00 46.38 3.56
5592 11780 5.625150 GGATAGATCCAGTAACCAAATGCT 58.375 41.667 3.54 0.00 46.38 3.79
5593 11781 5.703130 GGATAGATCCAGTAACCAAATGCTC 59.297 44.000 3.54 0.00 46.38 4.26
5594 11782 3.891049 AGATCCAGTAACCAAATGCTCC 58.109 45.455 0.00 0.00 0.00 4.70
5595 11783 2.507407 TCCAGTAACCAAATGCTCCC 57.493 50.000 0.00 0.00 0.00 4.30
5596 11784 1.992557 TCCAGTAACCAAATGCTCCCT 59.007 47.619 0.00 0.00 0.00 4.20
5597 11785 2.094675 CCAGTAACCAAATGCTCCCTG 58.905 52.381 0.00 0.00 0.00 4.45
5598 11786 2.290896 CCAGTAACCAAATGCTCCCTGA 60.291 50.000 0.00 0.00 0.00 3.86
5599 11787 2.749621 CAGTAACCAAATGCTCCCTGAC 59.250 50.000 0.00 0.00 0.00 3.51
5600 11788 2.092323 GTAACCAAATGCTCCCTGACC 58.908 52.381 0.00 0.00 0.00 4.02
5601 11789 0.779997 AACCAAATGCTCCCTGACCT 59.220 50.000 0.00 0.00 0.00 3.85
5602 11790 0.329596 ACCAAATGCTCCCTGACCTC 59.670 55.000 0.00 0.00 0.00 3.85
5603 11791 0.394899 CCAAATGCTCCCTGACCTCC 60.395 60.000 0.00 0.00 0.00 4.30
5604 11792 0.745845 CAAATGCTCCCTGACCTCCG 60.746 60.000 0.00 0.00 0.00 4.63
5605 11793 1.201429 AAATGCTCCCTGACCTCCGT 61.201 55.000 0.00 0.00 0.00 4.69
5606 11794 1.617947 AATGCTCCCTGACCTCCGTC 61.618 60.000 0.00 0.00 39.66 4.79
5607 11795 2.363147 GCTCCCTGACCTCCGTCT 60.363 66.667 0.00 0.00 39.94 4.18
5608 11796 2.716017 GCTCCCTGACCTCCGTCTG 61.716 68.421 0.00 0.00 39.94 3.51
5609 11797 1.000771 CTCCCTGACCTCCGTCTGA 60.001 63.158 0.00 0.00 39.61 3.27
5610 11798 1.000771 TCCCTGACCTCCGTCTGAG 60.001 63.158 0.00 0.00 39.61 3.35
5611 11799 1.304547 CCCTGACCTCCGTCTGAGT 60.305 63.158 0.00 0.00 39.61 3.41
5612 11800 1.599606 CCCTGACCTCCGTCTGAGTG 61.600 65.000 0.00 0.00 39.61 3.51
5613 11801 0.609406 CCTGACCTCCGTCTGAGTGA 60.609 60.000 0.00 0.00 39.61 3.41
5614 11802 0.808125 CTGACCTCCGTCTGAGTGAG 59.192 60.000 0.00 0.00 39.61 3.51
5615 11803 0.110678 TGACCTCCGTCTGAGTGAGT 59.889 55.000 3.52 0.00 39.65 3.41
5616 11804 1.350019 TGACCTCCGTCTGAGTGAGTA 59.650 52.381 3.52 0.00 39.65 2.59
5617 11805 2.011222 GACCTCCGTCTGAGTGAGTAG 58.989 57.143 3.52 0.00 39.65 2.57
5618 11806 0.736053 CCTCCGTCTGAGTGAGTAGC 59.264 60.000 3.52 0.00 39.65 3.58
5619 11807 0.375454 CTCCGTCTGAGTGAGTAGCG 59.625 60.000 0.00 0.00 36.27 4.26
5620 11808 0.036671 TCCGTCTGAGTGAGTAGCGA 60.037 55.000 0.00 0.00 0.00 4.93
5621 11809 0.097325 CCGTCTGAGTGAGTAGCGAC 59.903 60.000 0.00 0.00 0.00 5.19
5622 11810 0.097325 CGTCTGAGTGAGTAGCGACC 59.903 60.000 0.00 0.00 0.00 4.79
5623 11811 1.166129 GTCTGAGTGAGTAGCGACCA 58.834 55.000 0.00 0.00 0.00 4.02
5624 11812 1.135632 GTCTGAGTGAGTAGCGACCAC 60.136 57.143 9.46 9.46 0.00 4.16
5625 11813 0.881796 CTGAGTGAGTAGCGACCACA 59.118 55.000 16.49 6.02 32.33 4.17
5626 11814 1.474478 CTGAGTGAGTAGCGACCACAT 59.526 52.381 16.49 6.07 32.33 3.21
5627 11815 2.683362 CTGAGTGAGTAGCGACCACATA 59.317 50.000 16.49 7.50 32.33 2.29
5628 11816 2.422479 TGAGTGAGTAGCGACCACATAC 59.578 50.000 16.49 10.15 32.33 2.39
5629 11817 1.400846 AGTGAGTAGCGACCACATACG 59.599 52.381 16.49 0.00 32.33 3.06
5630 11818 0.736636 TGAGTAGCGACCACATACGG 59.263 55.000 0.00 0.00 0.00 4.02
5631 11819 0.030369 GAGTAGCGACCACATACGGG 59.970 60.000 0.00 0.00 0.00 5.28
5632 11820 0.682209 AGTAGCGACCACATACGGGT 60.682 55.000 0.00 0.00 42.61 5.28
5633 11821 0.526954 GTAGCGACCACATACGGGTG 60.527 60.000 0.00 0.00 39.19 4.61
5634 11822 0.680601 TAGCGACCACATACGGGTGA 60.681 55.000 5.81 0.00 41.32 4.02
5635 11823 1.518572 GCGACCACATACGGGTGAG 60.519 63.158 5.81 0.14 41.32 3.51
5636 11824 1.888018 CGACCACATACGGGTGAGT 59.112 57.895 5.81 2.86 41.32 3.41
5637 11825 0.457853 CGACCACATACGGGTGAGTG 60.458 60.000 5.81 0.00 41.32 3.51
5638 11826 0.606604 GACCACATACGGGTGAGTGT 59.393 55.000 5.81 0.00 41.32 3.55
5639 11827 1.820519 GACCACATACGGGTGAGTGTA 59.179 52.381 5.81 0.00 41.32 2.90
5640 11828 1.822990 ACCACATACGGGTGAGTGTAG 59.177 52.381 5.81 0.00 41.32 2.74
5641 11829 1.822990 CCACATACGGGTGAGTGTAGT 59.177 52.381 5.81 0.00 41.32 2.73
5642 11830 2.416836 CCACATACGGGTGAGTGTAGTG 60.417 54.545 5.81 0.00 41.32 2.74
5643 11831 1.822990 ACATACGGGTGAGTGTAGTGG 59.177 52.381 0.00 0.00 0.00 4.00
5644 11832 0.822164 ATACGGGTGAGTGTAGTGGC 59.178 55.000 0.00 0.00 0.00 5.01
5645 11833 1.252904 TACGGGTGAGTGTAGTGGCC 61.253 60.000 0.00 0.00 0.00 5.36
5646 11834 2.283529 CGGGTGAGTGTAGTGGCCT 61.284 63.158 3.32 0.00 0.00 5.19
5647 11835 1.296715 GGGTGAGTGTAGTGGCCTG 59.703 63.158 3.32 0.00 0.00 4.85
5648 11836 1.192146 GGGTGAGTGTAGTGGCCTGA 61.192 60.000 3.32 0.00 0.00 3.86
5649 11837 0.685097 GGTGAGTGTAGTGGCCTGAA 59.315 55.000 3.32 0.00 0.00 3.02
5650 11838 1.338200 GGTGAGTGTAGTGGCCTGAAG 60.338 57.143 3.32 0.00 0.00 3.02
5651 11839 1.618837 GTGAGTGTAGTGGCCTGAAGA 59.381 52.381 3.32 0.00 0.00 2.87
5652 11840 1.618837 TGAGTGTAGTGGCCTGAAGAC 59.381 52.381 3.32 0.00 0.00 3.01
5653 11841 1.618837 GAGTGTAGTGGCCTGAAGACA 59.381 52.381 3.32 0.00 0.00 3.41
5654 11842 2.037251 GAGTGTAGTGGCCTGAAGACAA 59.963 50.000 3.32 0.00 0.00 3.18
5655 11843 2.143925 GTGTAGTGGCCTGAAGACAAC 58.856 52.381 3.32 0.00 0.00 3.32
5656 11844 1.071699 TGTAGTGGCCTGAAGACAACC 59.928 52.381 3.32 0.00 0.00 3.77
5657 11845 1.348036 GTAGTGGCCTGAAGACAACCT 59.652 52.381 3.32 0.00 0.00 3.50
5658 11846 0.109342 AGTGGCCTGAAGACAACCTG 59.891 55.000 3.32 0.00 0.00 4.00
5659 11847 1.228245 TGGCCTGAAGACAACCTGC 60.228 57.895 3.32 0.00 0.00 4.85
5660 11848 2.328099 GGCCTGAAGACAACCTGCG 61.328 63.158 0.00 0.00 0.00 5.18
5661 11849 2.328099 GCCTGAAGACAACCTGCGG 61.328 63.158 0.00 0.00 0.00 5.69
5662 11850 1.672356 CCTGAAGACAACCTGCGGG 60.672 63.158 11.02 11.02 40.60 6.13
5663 11851 1.371183 CTGAAGACAACCTGCGGGA 59.629 57.895 21.41 0.00 36.25 5.14
5664 11852 0.250295 CTGAAGACAACCTGCGGGAA 60.250 55.000 21.41 0.00 36.25 3.97
5665 11853 0.181587 TGAAGACAACCTGCGGGAAA 59.818 50.000 21.41 0.00 36.25 3.13
5666 11854 1.202879 TGAAGACAACCTGCGGGAAAT 60.203 47.619 21.41 1.61 36.25 2.17
5667 11855 1.200020 GAAGACAACCTGCGGGAAATG 59.800 52.381 21.41 16.15 36.25 2.32
5668 11856 0.400213 AGACAACCTGCGGGAAATGA 59.600 50.000 21.41 0.00 36.25 2.57
5669 11857 1.202879 AGACAACCTGCGGGAAATGAA 60.203 47.619 21.41 0.00 36.25 2.57
5670 11858 1.818674 GACAACCTGCGGGAAATGAAT 59.181 47.619 21.41 0.00 36.25 2.57
5671 11859 3.013921 GACAACCTGCGGGAAATGAATA 58.986 45.455 21.41 0.00 36.25 1.75
5672 11860 3.016736 ACAACCTGCGGGAAATGAATAG 58.983 45.455 21.41 0.00 36.25 1.73
5673 11861 3.016736 CAACCTGCGGGAAATGAATAGT 58.983 45.455 21.41 0.00 36.25 2.12
5674 11862 2.643551 ACCTGCGGGAAATGAATAGTG 58.356 47.619 21.41 0.00 36.25 2.74
5675 11863 2.026262 ACCTGCGGGAAATGAATAGTGT 60.026 45.455 21.41 0.00 36.25 3.55
5676 11864 3.016736 CCTGCGGGAAATGAATAGTGTT 58.983 45.455 5.28 0.00 33.58 3.32
5677 11865 4.196193 CCTGCGGGAAATGAATAGTGTTA 58.804 43.478 5.28 0.00 33.58 2.41
5678 11866 4.638421 CCTGCGGGAAATGAATAGTGTTAA 59.362 41.667 5.28 0.00 33.58 2.01
5679 11867 5.448632 CCTGCGGGAAATGAATAGTGTTAAC 60.449 44.000 5.28 0.00 33.58 2.01
5680 11868 4.093703 TGCGGGAAATGAATAGTGTTAACG 59.906 41.667 0.26 0.00 0.00 3.18
5681 11869 4.093850 GCGGGAAATGAATAGTGTTAACGT 59.906 41.667 0.26 0.00 0.00 3.99
5682 11870 5.391203 GCGGGAAATGAATAGTGTTAACGTT 60.391 40.000 5.88 5.88 0.00 3.99
5683 11871 6.604930 CGGGAAATGAATAGTGTTAACGTTT 58.395 36.000 5.91 0.00 0.00 3.60
5684 11872 7.623925 GCGGGAAATGAATAGTGTTAACGTTTA 60.624 37.037 5.91 0.00 0.00 2.01
5685 11873 7.689400 CGGGAAATGAATAGTGTTAACGTTTAC 59.311 37.037 5.91 8.56 0.00 2.01
5686 11874 8.724229 GGGAAATGAATAGTGTTAACGTTTACT 58.276 33.333 17.33 15.62 0.00 2.24
5689 11877 8.944212 AATGAATAGTGTTAACGTTTACTTGC 57.056 30.769 17.33 8.53 0.00 4.01
5690 11878 7.479897 TGAATAGTGTTAACGTTTACTTGCA 57.520 32.000 17.33 10.30 0.00 4.08
5691 11879 8.090250 TGAATAGTGTTAACGTTTACTTGCAT 57.910 30.769 17.33 4.36 0.00 3.96
5692 11880 8.225107 TGAATAGTGTTAACGTTTACTTGCATC 58.775 33.333 17.33 10.99 0.00 3.91
5693 11881 5.352643 AGTGTTAACGTTTACTTGCATCC 57.647 39.130 17.33 0.00 0.00 3.51
5694 11882 5.061179 AGTGTTAACGTTTACTTGCATCCT 58.939 37.500 17.33 1.37 0.00 3.24
5695 11883 5.529800 AGTGTTAACGTTTACTTGCATCCTT 59.470 36.000 17.33 0.00 0.00 3.36
5696 11884 6.707161 AGTGTTAACGTTTACTTGCATCCTTA 59.293 34.615 17.33 0.00 0.00 2.69
5697 11885 7.013529 GTGTTAACGTTTACTTGCATCCTTAG 58.986 38.462 17.33 0.00 0.00 2.18
5698 11886 6.930164 TGTTAACGTTTACTTGCATCCTTAGA 59.070 34.615 17.33 0.00 0.00 2.10
5699 11887 5.857822 AACGTTTACTTGCATCCTTAGAC 57.142 39.130 0.00 0.00 0.00 2.59
5700 11888 4.251268 ACGTTTACTTGCATCCTTAGACC 58.749 43.478 0.00 0.00 0.00 3.85
5701 11889 4.250464 CGTTTACTTGCATCCTTAGACCA 58.750 43.478 0.00 0.00 0.00 4.02
5702 11890 4.876107 CGTTTACTTGCATCCTTAGACCAT 59.124 41.667 0.00 0.00 0.00 3.55
5703 11891 5.220662 CGTTTACTTGCATCCTTAGACCATG 60.221 44.000 0.00 0.00 0.00 3.66
5704 11892 5.692115 TTACTTGCATCCTTAGACCATGA 57.308 39.130 0.00 0.00 0.00 3.07
5705 11893 4.148128 ACTTGCATCCTTAGACCATGAG 57.852 45.455 0.00 0.00 0.00 2.90
5706 11894 3.521126 ACTTGCATCCTTAGACCATGAGT 59.479 43.478 0.00 0.00 0.00 3.41
5707 11895 3.827008 TGCATCCTTAGACCATGAGTC 57.173 47.619 0.00 0.00 46.71 3.36
5716 11904 2.802787 GACCATGAGTCATAGACCCG 57.197 55.000 5.03 0.00 45.55 5.28
5717 11905 1.341531 GACCATGAGTCATAGACCCGG 59.658 57.143 5.03 4.36 45.55 5.73
5718 11906 1.063190 ACCATGAGTCATAGACCCGGA 60.063 52.381 0.73 0.00 32.18 5.14
5719 11907 2.251818 CCATGAGTCATAGACCCGGAT 58.748 52.381 0.73 0.00 32.18 4.18
5720 11908 3.181422 ACCATGAGTCATAGACCCGGATA 60.181 47.826 0.73 0.00 32.18 2.59
5721 11909 4.026744 CCATGAGTCATAGACCCGGATAT 58.973 47.826 0.73 0.00 32.18 1.63
5722 11910 4.098654 CCATGAGTCATAGACCCGGATATC 59.901 50.000 0.73 0.00 32.18 1.63
5723 11911 3.344515 TGAGTCATAGACCCGGATATCG 58.655 50.000 0.73 0.00 38.88 2.92
5737 11925 3.994392 CGGATATCGGATGGTTACTTTGG 59.006 47.826 4.30 0.00 34.75 3.28
5738 11926 4.324267 GGATATCGGATGGTTACTTTGGG 58.676 47.826 0.00 0.00 0.00 4.12
5739 11927 2.729028 ATCGGATGGTTACTTTGGGG 57.271 50.000 0.00 0.00 0.00 4.96
5740 11928 1.364269 TCGGATGGTTACTTTGGGGT 58.636 50.000 0.00 0.00 0.00 4.95
5741 11929 1.706305 TCGGATGGTTACTTTGGGGTT 59.294 47.619 0.00 0.00 0.00 4.11
5742 11930 1.816224 CGGATGGTTACTTTGGGGTTG 59.184 52.381 0.00 0.00 0.00 3.77
5743 11931 1.548719 GGATGGTTACTTTGGGGTTGC 59.451 52.381 0.00 0.00 0.00 4.17
5744 11932 1.548719 GATGGTTACTTTGGGGTTGCC 59.451 52.381 0.00 0.00 0.00 4.52
5745 11933 0.261991 TGGTTACTTTGGGGTTGCCA 59.738 50.000 0.00 0.00 0.00 4.92
5746 11934 1.343075 TGGTTACTTTGGGGTTGCCAA 60.343 47.619 0.00 0.00 0.00 4.52
5747 11935 1.763545 GGTTACTTTGGGGTTGCCAAA 59.236 47.619 0.00 0.00 36.06 3.28
5748 11936 2.370519 GGTTACTTTGGGGTTGCCAAAT 59.629 45.455 0.00 0.00 36.71 2.32
5749 11937 3.398406 GTTACTTTGGGGTTGCCAAATG 58.602 45.455 0.00 0.00 36.71 2.32
5750 11938 1.506025 ACTTTGGGGTTGCCAAATGT 58.494 45.000 0.00 0.00 36.71 2.71
5751 11939 1.843206 ACTTTGGGGTTGCCAAATGTT 59.157 42.857 0.00 0.00 36.71 2.71
5752 11940 3.041946 ACTTTGGGGTTGCCAAATGTTA 58.958 40.909 0.00 0.00 36.71 2.41
5753 11941 3.181459 ACTTTGGGGTTGCCAAATGTTAC 60.181 43.478 0.00 0.00 36.71 2.50
5754 11942 2.390225 TGGGGTTGCCAAATGTTACT 57.610 45.000 0.00 0.00 0.00 2.24
5755 11943 2.243810 TGGGGTTGCCAAATGTTACTC 58.756 47.619 0.00 0.00 0.00 2.59
5756 11944 1.548719 GGGGTTGCCAAATGTTACTCC 59.451 52.381 0.00 0.00 0.00 3.85
5757 11945 1.201414 GGGTTGCCAAATGTTACTCCG 59.799 52.381 0.00 0.00 0.00 4.63
5758 11946 1.883926 GGTTGCCAAATGTTACTCCGT 59.116 47.619 0.00 0.00 0.00 4.69
5759 11947 3.075884 GGTTGCCAAATGTTACTCCGTA 58.924 45.455 0.00 0.00 0.00 4.02
5760 11948 3.692593 GGTTGCCAAATGTTACTCCGTAT 59.307 43.478 0.00 0.00 0.00 3.06
5761 11949 4.201881 GGTTGCCAAATGTTACTCCGTATC 60.202 45.833 0.00 0.00 0.00 2.24
5762 11950 4.481368 TGCCAAATGTTACTCCGTATCT 57.519 40.909 0.00 0.00 0.00 1.98
5763 11951 5.601583 TGCCAAATGTTACTCCGTATCTA 57.398 39.130 0.00 0.00 0.00 1.98
5764 11952 5.597806 TGCCAAATGTTACTCCGTATCTAG 58.402 41.667 0.00 0.00 0.00 2.43
5765 11953 4.989168 GCCAAATGTTACTCCGTATCTAGG 59.011 45.833 0.00 0.00 0.00 3.02
5766 11954 5.452917 GCCAAATGTTACTCCGTATCTAGGT 60.453 44.000 0.00 0.00 0.00 3.08
5767 11955 5.983720 CCAAATGTTACTCCGTATCTAGGTG 59.016 44.000 0.00 0.00 0.00 4.00
5768 11956 6.183360 CCAAATGTTACTCCGTATCTAGGTGA 60.183 42.308 0.00 0.00 0.00 4.02
5769 11957 7.434492 CAAATGTTACTCCGTATCTAGGTGAT 58.566 38.462 0.00 0.00 39.11 3.06
5770 11958 7.598759 AATGTTACTCCGTATCTAGGTGATT 57.401 36.000 0.00 0.00 36.65 2.57
5771 11959 7.598759 ATGTTACTCCGTATCTAGGTGATTT 57.401 36.000 0.00 0.00 36.65 2.17
5772 11960 7.414222 TGTTACTCCGTATCTAGGTGATTTT 57.586 36.000 0.00 0.00 36.65 1.82
5773 11961 8.523915 TGTTACTCCGTATCTAGGTGATTTTA 57.476 34.615 0.00 0.00 36.65 1.52
5774 11962 8.970020 TGTTACTCCGTATCTAGGTGATTTTAA 58.030 33.333 0.00 0.00 36.65 1.52
5775 11963 9.460906 GTTACTCCGTATCTAGGTGATTTTAAG 57.539 37.037 0.00 0.00 36.65 1.85
5776 11964 7.052142 ACTCCGTATCTAGGTGATTTTAAGG 57.948 40.000 0.00 0.00 36.65 2.69
5777 11965 6.610425 ACTCCGTATCTAGGTGATTTTAAGGT 59.390 38.462 0.00 0.00 36.65 3.50
5778 11966 6.812998 TCCGTATCTAGGTGATTTTAAGGTG 58.187 40.000 0.00 0.00 36.65 4.00
5779 11967 6.608405 TCCGTATCTAGGTGATTTTAAGGTGA 59.392 38.462 0.00 0.00 36.65 4.02
5780 11968 6.700520 CCGTATCTAGGTGATTTTAAGGTGAC 59.299 42.308 0.00 0.00 36.65 3.67
5781 11969 7.417570 CCGTATCTAGGTGATTTTAAGGTGACT 60.418 40.741 0.00 0.00 38.42 3.41
5782 11970 7.980099 CGTATCTAGGTGATTTTAAGGTGACTT 59.020 37.037 0.00 0.00 44.05 3.01
5783 11971 9.668497 GTATCTAGGTGATTTTAAGGTGACTTT 57.332 33.333 0.00 0.00 41.32 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
398 1172 3.696051 TGCATAGAAATGTGGAAGGAAGC 59.304 43.478 0.00 0.00 35.38 3.86
450 1228 3.282374 ATGAGGCCGGGTTGGTTCC 62.282 63.158 2.18 0.00 41.21 3.62
557 1339 5.189736 ACAATCACTATGGTTTAGCTGAGGA 59.810 40.000 0.00 0.00 0.00 3.71
588 1370 7.481642 ACGTATTGACAAACCAAACATTAACA 58.518 30.769 0.00 0.00 0.00 2.41
735 1520 1.477553 ACTTACGGAGGTTGCGGATA 58.522 50.000 0.00 0.00 34.75 2.59
760 1550 6.042777 GTCGGGCATGCGCATATATATATAT 58.957 40.000 31.00 9.12 41.24 0.86
761 1551 5.407502 GTCGGGCATGCGCATATATATATA 58.592 41.667 31.00 4.92 41.24 0.86
762 1552 4.245660 GTCGGGCATGCGCATATATATAT 58.754 43.478 31.00 0.00 41.24 0.86
763 1553 3.649073 GTCGGGCATGCGCATATATATA 58.351 45.455 31.00 4.44 41.24 0.86
764 1554 2.483876 GTCGGGCATGCGCATATATAT 58.516 47.619 31.00 0.00 41.24 0.86
765 1555 1.801025 CGTCGGGCATGCGCATATATA 60.801 52.381 31.00 5.01 41.24 0.86
766 1556 1.083806 CGTCGGGCATGCGCATATAT 61.084 55.000 31.00 0.00 41.24 0.86
767 1557 1.736282 CGTCGGGCATGCGCATATA 60.736 57.895 31.00 12.79 41.24 0.86
774 1564 0.529773 TCTATCAACGTCGGGCATGC 60.530 55.000 9.90 9.90 0.00 4.06
785 1829 9.362539 TCGAAGTTTAATTACACCTCTATCAAC 57.637 33.333 0.00 0.00 0.00 3.18
873 1924 2.352030 CGCCATCAGCACATTTTCTTGT 60.352 45.455 0.00 0.00 44.04 3.16
966 2017 1.080569 GTTGGCCAATGACCGCTTG 60.081 57.895 23.66 0.00 0.00 4.01
977 2028 2.016604 GCCTGATAACATCGTTGGCCA 61.017 52.381 0.00 0.00 37.04 5.36
982 2033 3.470709 CCATCTGCCTGATAACATCGTT 58.529 45.455 0.00 0.00 33.36 3.85
1185 2236 0.181114 CATTCCTTCTGGCGATCCCA 59.819 55.000 3.30 3.30 42.79 4.37
1251 2302 0.619832 AGAGGCCATGGAAGAGCTCA 60.620 55.000 18.40 0.00 0.00 4.26
1623 4320 2.224450 GCCTATACGCCCCTGTATTTGT 60.224 50.000 0.00 0.00 36.48 2.83
1710 4460 2.049063 GCTCGCCCTATACGCAGG 60.049 66.667 0.00 0.00 35.26 4.85
1714 4464 1.658994 TTTTTGGCTCGCCCTATACG 58.341 50.000 5.33 0.00 34.56 3.06
1738 4488 1.416030 GGCATCTGTTTGGTTTGGGTT 59.584 47.619 0.00 0.00 0.00 4.11
1745 4495 2.233271 CTGTGAAGGCATCTGTTTGGT 58.767 47.619 0.00 0.00 0.00 3.67
1762 4512 0.814457 TTTTTGGCGTTGACAGCTGT 59.186 45.000 21.88 21.88 34.52 4.40
1784 4534 4.657952 GGTTCCGCCTGGCTATTT 57.342 55.556 17.92 0.00 34.14 1.40
1802 4552 1.225855 GTCTGTTTGGATCGCACACA 58.774 50.000 4.00 4.00 0.00 3.72
1872 4624 8.064222 CGAATATCAGCTAAATGTTCGATTTGT 58.936 33.333 23.89 0.00 45.11 2.83
1879 4631 5.179555 GGACCCGAATATCAGCTAAATGTTC 59.820 44.000 7.36 7.36 0.00 3.18
1884 4636 4.764050 TTGGACCCGAATATCAGCTAAA 57.236 40.909 0.00 0.00 0.00 1.85
1887 4639 2.705658 TGATTGGACCCGAATATCAGCT 59.294 45.455 0.00 0.00 0.00 4.24
1888 4640 3.126001 TGATTGGACCCGAATATCAGC 57.874 47.619 0.00 0.00 0.00 4.26
1889 4641 4.645535 ACATGATTGGACCCGAATATCAG 58.354 43.478 0.00 0.00 0.00 2.90
1890 4642 4.705110 ACATGATTGGACCCGAATATCA 57.295 40.909 0.00 0.00 0.00 2.15
1891 4643 4.152402 CGAACATGATTGGACCCGAATATC 59.848 45.833 0.00 0.00 0.00 1.63
1892 4644 4.065088 CGAACATGATTGGACCCGAATAT 58.935 43.478 0.00 0.00 0.00 1.28
1893 4645 3.462982 CGAACATGATTGGACCCGAATA 58.537 45.455 0.00 0.00 0.00 1.75
1894 4646 2.288666 CGAACATGATTGGACCCGAAT 58.711 47.619 0.00 0.00 0.00 3.34
1898 4650 0.679640 TGGCGAACATGATTGGACCC 60.680 55.000 0.00 0.00 0.00 4.46
1900 4652 2.083774 TCTTGGCGAACATGATTGGAC 58.916 47.619 0.00 0.00 0.00 4.02
1901 4653 2.488204 TCTTGGCGAACATGATTGGA 57.512 45.000 0.00 0.00 0.00 3.53
1903 4655 4.100529 GTCATTCTTGGCGAACATGATTG 58.899 43.478 0.00 0.00 36.62 2.67
1907 4659 3.058016 ACTTGTCATTCTTGGCGAACATG 60.058 43.478 0.00 0.00 33.72 3.21
1979 4736 5.537410 CAAATTTAATTTGTAAGCACGGCG 58.463 37.500 19.01 4.80 43.47 6.46
2026 4784 7.087639 GTGGTAAATCGAACATTTTTCATGGA 58.912 34.615 0.00 0.00 0.00 3.41
2041 4799 5.411361 TCTGATTTTCAGGTGTGGTAAATCG 59.589 40.000 4.78 0.00 44.39 3.34
2044 4802 4.513692 CGTCTGATTTTCAGGTGTGGTAAA 59.486 41.667 4.78 0.00 44.39 2.01
2052 4811 4.543590 ATCTGACGTCTGATTTTCAGGT 57.456 40.909 26.67 8.30 44.39 4.00
2112 4871 3.431725 GCTTTTCCACGCGGAGGG 61.432 66.667 12.47 9.45 44.10 4.30
2113 4872 1.586154 ATTGCTTTTCCACGCGGAGG 61.586 55.000 12.47 12.80 44.10 4.30
2114 4873 1.083489 TATTGCTTTTCCACGCGGAG 58.917 50.000 12.47 1.64 44.10 4.63
2121 4880 4.764308 GGGCCAAATTTTATTGCTTTTCCA 59.236 37.500 4.39 0.00 0.00 3.53
2123 4883 5.704978 TCTGGGCCAAATTTTATTGCTTTTC 59.295 36.000 8.04 0.00 0.00 2.29
2129 4889 8.046107 TCCTAAATTCTGGGCCAAATTTTATTG 58.954 33.333 28.12 20.01 36.66 1.90
2182 4942 1.920574 GCTATGCACACTACAGTCGTG 59.079 52.381 3.67 3.67 38.32 4.35
2211 4971 3.723235 ATGCTCGTGGTGCCGCTAG 62.723 63.158 0.06 0.00 0.00 3.42
2224 5080 5.043248 CCACCCGATATTTTTCAAATGCTC 58.957 41.667 0.00 0.00 0.00 4.26
2272 5170 8.783093 CATGTAGGTGTCAAGTTTGAGATTTTA 58.217 33.333 0.00 0.00 37.98 1.52
2273 5171 7.285401 ACATGTAGGTGTCAAGTTTGAGATTTT 59.715 33.333 0.00 0.00 37.98 1.82
2275 5173 6.299141 ACATGTAGGTGTCAAGTTTGAGATT 58.701 36.000 0.00 0.00 37.98 2.40
2276 5174 5.869579 ACATGTAGGTGTCAAGTTTGAGAT 58.130 37.500 0.00 0.00 37.98 2.75
2278 5176 5.597813 GACATGTAGGTGTCAAGTTTGAG 57.402 43.478 0.00 0.00 46.04 3.02
2358 6184 6.685527 TTAGTTTTGTATGTGCACTTGTCA 57.314 33.333 19.41 12.39 0.00 3.58
2372 6200 8.597662 TTAAGTCGTAAGCTCATTAGTTTTGT 57.402 30.769 0.00 0.00 37.18 2.83
2402 6230 4.038042 TCGACTGGTATGAAGCTCATTAGG 59.962 45.833 4.35 0.00 38.26 2.69
2560 8238 4.832248 TGTATGTGATGGGAGTTCTCAAC 58.168 43.478 2.24 0.00 0.00 3.18
2666 8450 6.539173 TGGATTGGAACTATAGTTGTGTGTT 58.461 36.000 22.68 0.00 38.56 3.32
2670 8454 6.595682 AGGATGGATTGGAACTATAGTTGTG 58.404 40.000 22.68 0.00 38.56 3.33
2694 8478 6.214191 TGCTACAACCAAAAAGTGAATCAA 57.786 33.333 0.00 0.00 0.00 2.57
2726 8513 2.571653 AGCTGTGGGTTGCAAGAGTATA 59.428 45.455 0.00 0.00 0.00 1.47
2752 8539 1.138859 TCGATGCCAGGATGTACTTGG 59.861 52.381 0.00 0.00 46.70 3.61
2823 8610 5.538433 TGGATTCTTTGTCCAACCCTTTAAG 59.462 40.000 0.00 0.00 42.56 1.85
2832 8619 3.874383 TGAGGTGGATTCTTTGTCCAA 57.126 42.857 0.00 0.00 46.67 3.53
2973 9110 4.450419 GCATGCTGACATTCTACCTCATAC 59.550 45.833 11.37 0.00 32.87 2.39
2986 9123 0.953471 GTTACCGGTGCATGCTGACA 60.953 55.000 19.93 0.00 0.00 3.58
2992 9129 3.567576 TTTTGATGTTACCGGTGCATG 57.432 42.857 24.78 0.00 0.00 4.06
2994 9131 3.319405 ACAATTTTGATGTTACCGGTGCA 59.681 39.130 19.93 16.74 0.00 4.57
2995 9132 3.908213 ACAATTTTGATGTTACCGGTGC 58.092 40.909 19.93 10.88 0.00 5.01
3120 9257 5.236047 GTGCATAAATGGTTCACAAGCAAAA 59.764 36.000 0.00 0.00 42.83 2.44
3191 9328 5.991606 TCCAAGTGAAAGTATCTTCTGTGTG 59.008 40.000 0.00 0.00 0.00 3.82
3192 9329 6.174720 TCCAAGTGAAAGTATCTTCTGTGT 57.825 37.500 0.00 0.00 0.00 3.72
3221 9358 1.120530 ATAACCTAGCGACACCCCAG 58.879 55.000 0.00 0.00 0.00 4.45
3384 9525 6.352516 AGATCATGTTCATACCTCAAAGTCC 58.647 40.000 6.55 0.00 0.00 3.85
3401 9542 4.008330 ACACAAAGCCTTGAGAGATCATG 58.992 43.478 1.09 0.00 36.33 3.07
3422 9563 9.543018 CTCGAGTTAAATTCTCCATACAAAAAC 57.457 33.333 3.62 0.00 0.00 2.43
3435 9576 9.118236 CCTTTCAATTTCACTCGAGTTAAATTC 57.882 33.333 32.57 0.00 38.83 2.17
3467 9608 2.609459 GCTTCCTACACGAACATGATGG 59.391 50.000 0.00 0.00 0.00 3.51
3601 9742 6.403309 CCATTTAAAGAAGAGACCCGCTTAAC 60.403 42.308 0.00 0.00 0.00 2.01
3608 9749 8.809468 ATTTAGTCCATTTAAAGAAGAGACCC 57.191 34.615 0.00 0.00 0.00 4.46
3622 9763 5.426185 ACCCAATGCATCAATTTAGTCCATT 59.574 36.000 0.00 0.00 0.00 3.16
3632 9773 4.040706 ACAAACTCAACCCAATGCATCAAT 59.959 37.500 0.00 0.00 0.00 2.57
3708 9850 0.898789 AGTACACGGTCACCCTCCTG 60.899 60.000 0.00 0.00 0.00 3.86
3721 9863 2.349532 GCTTGCCTTCGTTGAAGTACAC 60.350 50.000 5.88 0.00 37.92 2.90
3957 10126 9.383519 ACATAAATTGAGTAGTATGTCAACCTG 57.616 33.333 1.17 1.10 35.55 4.00
3975 10144 6.811170 CGTGCCTAAAATGGTCAACATAAATT 59.189 34.615 0.00 0.00 39.40 1.82
3976 10145 6.151985 TCGTGCCTAAAATGGTCAACATAAAT 59.848 34.615 0.00 0.00 39.40 1.40
3978 10147 5.004448 TCGTGCCTAAAATGGTCAACATAA 58.996 37.500 0.00 0.00 39.40 1.90
4053 10226 4.651778 TCCTCGACAAATGATGGAAAACT 58.348 39.130 0.00 0.00 0.00 2.66
4237 10411 1.270518 CGGAGATGAGGCCCAAGTATG 60.271 57.143 0.00 0.00 0.00 2.39
4289 10463 5.348997 GTGTTCTATTCCTCTTTGAAGTCCG 59.651 44.000 0.00 0.00 0.00 4.79
4406 10580 6.158023 ACTCCAGAACCTGTAATTATACCG 57.842 41.667 0.00 0.00 0.00 4.02
4603 10777 6.813649 CAGGATATATTGACCACTAATGTCGG 59.186 42.308 0.00 0.00 35.46 4.79
4807 10981 7.936584 TGATAGGACAACAAAAACCTAGTTTG 58.063 34.615 0.00 3.44 40.95 2.93
4811 10985 8.786826 TGTATGATAGGACAACAAAAACCTAG 57.213 34.615 0.00 0.00 38.21 3.02
4817 10991 9.679661 ACATACATGTATGATAGGACAACAAAA 57.320 29.630 39.63 3.92 44.22 2.44
4960 11147 9.546428 CATATTTCAAAAAGAGTTTCAAACCCT 57.454 29.630 0.00 0.00 0.00 4.34
4961 11148 9.325198 ACATATTTCAAAAAGAGTTTCAAACCC 57.675 29.630 0.00 0.00 0.00 4.11
4987 11174 7.231467 AGCAACTTTTGTAATTTCCTCTAGGA 58.769 34.615 0.00 0.00 43.73 2.94
5042 11229 7.332430 CACATTCAAGAACCATTGCAATGTTAT 59.668 33.333 31.87 21.54 38.00 1.89
5045 11232 4.992319 CACATTCAAGAACCATTGCAATGT 59.008 37.500 31.87 18.64 39.15 2.71
5046 11233 5.231702 TCACATTCAAGAACCATTGCAATG 58.768 37.500 28.91 28.91 35.78 2.82
5109 11297 3.576078 CCACTAGGGATATGTTTGGCA 57.424 47.619 0.00 0.00 40.01 4.92
5128 11316 0.398664 TTAGCTAGTCCAGAGGCCCC 60.399 60.000 0.00 0.00 0.00 5.80
5165 11353 3.899052 ATGCCCATGGTCAAGAAAATG 57.101 42.857 11.73 0.00 0.00 2.32
5166 11354 6.156602 TCAATAATGCCCATGGTCAAGAAAAT 59.843 34.615 11.73 0.00 0.00 1.82
5172 11360 4.288398 ACATCAATAATGCCCATGGTCAA 58.712 39.130 11.73 0.00 39.12 3.18
5190 11378 7.801716 TTATTATGAGCACCCTTGTTACATC 57.198 36.000 0.00 0.00 0.00 3.06
5208 11396 8.564574 ACAACAACAACGTGTTCTCATTATTAT 58.435 29.630 0.00 0.00 38.77 1.28
5209 11397 7.921787 ACAACAACAACGTGTTCTCATTATTA 58.078 30.769 0.00 0.00 38.77 0.98
5254 11442 9.904198 TGATCTCATTGTATTTCATAAGTTGGA 57.096 29.630 0.00 0.00 0.00 3.53
5271 11459 5.118990 CCATACAAACGACCTGATCTCATT 58.881 41.667 0.00 0.00 0.00 2.57
5273 11461 3.513912 ACCATACAAACGACCTGATCTCA 59.486 43.478 0.00 0.00 0.00 3.27
5281 11469 3.169355 ACCGATACCATACAAACGACC 57.831 47.619 0.00 0.00 0.00 4.79
5282 11470 6.833342 AAATACCGATACCATACAAACGAC 57.167 37.500 0.00 0.00 0.00 4.34
5315 11503 2.431419 GGACGAACCCCCTTTTCAAAAA 59.569 45.455 0.00 0.00 0.00 1.94
5316 11504 2.033372 GGACGAACCCCCTTTTCAAAA 58.967 47.619 0.00 0.00 0.00 2.44
5317 11505 1.694844 GGACGAACCCCCTTTTCAAA 58.305 50.000 0.00 0.00 0.00 2.69
5318 11506 3.425122 GGACGAACCCCCTTTTCAA 57.575 52.632 0.00 0.00 0.00 2.69
5333 11521 3.746949 CTGATGCAGAGGCCGGGAC 62.747 68.421 2.18 0.00 40.13 4.46
5334 11522 3.473647 CTGATGCAGAGGCCGGGA 61.474 66.667 2.18 0.00 40.13 5.14
5335 11523 2.541547 TTTCTGATGCAGAGGCCGGG 62.542 60.000 2.18 0.00 41.75 5.73
5336 11524 1.078214 TTTCTGATGCAGAGGCCGG 60.078 57.895 0.00 0.00 41.75 6.13
5337 11525 0.107993 TCTTTCTGATGCAGAGGCCG 60.108 55.000 0.00 0.00 41.75 6.13
5338 11526 1.948145 CATCTTTCTGATGCAGAGGCC 59.052 52.381 0.00 0.00 44.96 5.19
5347 11535 4.406648 TGGTCGTATGCATCTTTCTGAT 57.593 40.909 0.19 0.00 35.40 2.90
5348 11536 3.885724 TGGTCGTATGCATCTTTCTGA 57.114 42.857 0.19 0.00 0.00 3.27
5349 11537 6.791887 AATATGGTCGTATGCATCTTTCTG 57.208 37.500 0.19 0.00 0.00 3.02
5376 11564 9.154632 AGACCTATGTTGGACCTTTTAATTTTT 57.845 29.630 0.00 0.00 0.00 1.94
5377 11565 8.721133 AGACCTATGTTGGACCTTTTAATTTT 57.279 30.769 0.00 0.00 0.00 1.82
5378 11566 7.120726 CGAGACCTATGTTGGACCTTTTAATTT 59.879 37.037 0.00 0.00 0.00 1.82
5379 11567 6.598064 CGAGACCTATGTTGGACCTTTTAATT 59.402 38.462 0.00 0.00 0.00 1.40
5380 11568 6.113411 CGAGACCTATGTTGGACCTTTTAAT 58.887 40.000 0.00 0.00 0.00 1.40
5381 11569 5.484715 CGAGACCTATGTTGGACCTTTTAA 58.515 41.667 0.00 0.00 0.00 1.52
5382 11570 4.081309 CCGAGACCTATGTTGGACCTTTTA 60.081 45.833 0.00 0.00 0.00 1.52
5383 11571 3.307480 CCGAGACCTATGTTGGACCTTTT 60.307 47.826 0.00 0.00 0.00 2.27
5384 11572 2.236395 CCGAGACCTATGTTGGACCTTT 59.764 50.000 0.00 0.00 0.00 3.11
5385 11573 1.831736 CCGAGACCTATGTTGGACCTT 59.168 52.381 0.00 0.00 0.00 3.50
5386 11574 1.006758 TCCGAGACCTATGTTGGACCT 59.993 52.381 0.00 0.00 0.00 3.85
5387 11575 1.409427 CTCCGAGACCTATGTTGGACC 59.591 57.143 0.00 0.00 0.00 4.46
5388 11576 2.099427 GACTCCGAGACCTATGTTGGAC 59.901 54.545 1.33 0.00 0.00 4.02
5389 11577 2.025226 AGACTCCGAGACCTATGTTGGA 60.025 50.000 1.33 0.00 0.00 3.53
5390 11578 2.359531 GAGACTCCGAGACCTATGTTGG 59.640 54.545 1.33 0.00 0.00 3.77
5391 11579 3.017442 TGAGACTCCGAGACCTATGTTG 58.983 50.000 1.33 0.00 0.00 3.33
5392 11580 3.367646 TGAGACTCCGAGACCTATGTT 57.632 47.619 1.33 0.00 0.00 2.71
5393 11581 3.367646 TTGAGACTCCGAGACCTATGT 57.632 47.619 1.33 0.00 0.00 2.29
5394 11582 3.444034 TGTTTGAGACTCCGAGACCTATG 59.556 47.826 1.33 0.00 0.00 2.23
5395 11583 3.698289 TGTTTGAGACTCCGAGACCTAT 58.302 45.455 1.33 0.00 0.00 2.57
5396 11584 3.150458 TGTTTGAGACTCCGAGACCTA 57.850 47.619 1.33 0.00 0.00 3.08
5397 11585 1.996798 TGTTTGAGACTCCGAGACCT 58.003 50.000 1.33 0.00 0.00 3.85
5398 11586 2.814280 TTGTTTGAGACTCCGAGACC 57.186 50.000 1.33 0.00 0.00 3.85
5399 11587 4.024809 CCTTTTTGTTTGAGACTCCGAGAC 60.025 45.833 1.33 0.00 0.00 3.36
5400 11588 4.127171 CCTTTTTGTTTGAGACTCCGAGA 58.873 43.478 1.33 0.00 0.00 4.04
5401 11589 4.127171 TCCTTTTTGTTTGAGACTCCGAG 58.873 43.478 0.00 0.00 0.00 4.63
5402 11590 4.145365 TCCTTTTTGTTTGAGACTCCGA 57.855 40.909 0.00 0.00 0.00 4.55
5403 11591 4.095782 TGTTCCTTTTTGTTTGAGACTCCG 59.904 41.667 0.00 0.00 0.00 4.63
5404 11592 5.576447 TGTTCCTTTTTGTTTGAGACTCC 57.424 39.130 0.00 0.00 0.00 3.85
5405 11593 7.464577 GCATTTGTTCCTTTTTGTTTGAGACTC 60.465 37.037 0.00 0.00 0.00 3.36
5406 11594 6.313658 GCATTTGTTCCTTTTTGTTTGAGACT 59.686 34.615 0.00 0.00 0.00 3.24
5407 11595 6.313658 AGCATTTGTTCCTTTTTGTTTGAGAC 59.686 34.615 0.00 0.00 0.00 3.36
5408 11596 6.405538 AGCATTTGTTCCTTTTTGTTTGAGA 58.594 32.000 0.00 0.00 0.00 3.27
5409 11597 6.313411 TGAGCATTTGTTCCTTTTTGTTTGAG 59.687 34.615 0.00 0.00 0.00 3.02
5410 11598 6.169094 TGAGCATTTGTTCCTTTTTGTTTGA 58.831 32.000 0.00 0.00 0.00 2.69
5411 11599 6.419980 TGAGCATTTGTTCCTTTTTGTTTG 57.580 33.333 0.00 0.00 0.00 2.93
5412 11600 7.446001 TTTGAGCATTTGTTCCTTTTTGTTT 57.554 28.000 0.00 0.00 0.00 2.83
5413 11601 7.446001 TTTTGAGCATTTGTTCCTTTTTGTT 57.554 28.000 0.00 0.00 0.00 2.83
5414 11602 7.390162 TCTTTTTGAGCATTTGTTCCTTTTTGT 59.610 29.630 0.00 0.00 0.00 2.83
5415 11603 7.750769 TCTTTTTGAGCATTTGTTCCTTTTTG 58.249 30.769 0.00 0.00 0.00 2.44
5416 11604 7.920160 TCTTTTTGAGCATTTGTTCCTTTTT 57.080 28.000 0.00 0.00 0.00 1.94
5417 11605 7.543947 CTCTTTTTGAGCATTTGTTCCTTTT 57.456 32.000 0.00 0.00 35.84 2.27
5431 11619 3.338818 TGCTTTCGTGCTCTTTTTGAG 57.661 42.857 0.00 0.00 45.33 3.02
5432 11620 3.773860 TTGCTTTCGTGCTCTTTTTGA 57.226 38.095 0.00 0.00 0.00 2.69
5433 11621 4.838665 TTTTGCTTTCGTGCTCTTTTTG 57.161 36.364 0.00 0.00 0.00 2.44
5452 11640 3.056179 CCAGTTGTGGTTGTCCTGTTTTT 60.056 43.478 0.00 0.00 39.30 1.94
5453 11641 2.495669 CCAGTTGTGGTTGTCCTGTTTT 59.504 45.455 0.00 0.00 39.30 2.43
5454 11642 2.099405 CCAGTTGTGGTTGTCCTGTTT 58.901 47.619 0.00 0.00 39.30 2.83
5455 11643 1.762708 CCAGTTGTGGTTGTCCTGTT 58.237 50.000 0.00 0.00 39.30 3.16
5456 11644 0.751643 GCCAGTTGTGGTTGTCCTGT 60.752 55.000 0.00 0.00 46.96 4.00
5457 11645 0.751277 TGCCAGTTGTGGTTGTCCTG 60.751 55.000 0.00 0.00 46.96 3.86
5458 11646 0.466189 CTGCCAGTTGTGGTTGTCCT 60.466 55.000 0.00 0.00 46.96 3.85
5459 11647 1.455383 CCTGCCAGTTGTGGTTGTCC 61.455 60.000 0.00 0.00 46.96 4.02
5460 11648 2.032981 CCTGCCAGTTGTGGTTGTC 58.967 57.895 0.00 0.00 46.96 3.18
5461 11649 2.127232 GCCTGCCAGTTGTGGTTGT 61.127 57.895 0.00 0.00 46.96 3.32
5462 11650 1.674764 TTGCCTGCCAGTTGTGGTTG 61.675 55.000 0.00 0.00 46.96 3.77
5463 11651 0.975040 TTTGCCTGCCAGTTGTGGTT 60.975 50.000 0.00 0.00 46.96 3.67
5464 11652 0.975040 TTTTGCCTGCCAGTTGTGGT 60.975 50.000 0.00 0.00 46.96 4.16
5466 11654 3.059166 GTTATTTTGCCTGCCAGTTGTG 58.941 45.455 0.00 0.00 0.00 3.33
5467 11655 2.697751 TGTTATTTTGCCTGCCAGTTGT 59.302 40.909 0.00 0.00 0.00 3.32
5468 11656 3.383620 TGTTATTTTGCCTGCCAGTTG 57.616 42.857 0.00 0.00 0.00 3.16
5469 11657 5.937975 ATATGTTATTTTGCCTGCCAGTT 57.062 34.783 0.00 0.00 0.00 3.16
5470 11658 5.536161 CCTATATGTTATTTTGCCTGCCAGT 59.464 40.000 0.00 0.00 0.00 4.00
5471 11659 5.769662 TCCTATATGTTATTTTGCCTGCCAG 59.230 40.000 0.00 0.00 0.00 4.85
5472 11660 5.700183 TCCTATATGTTATTTTGCCTGCCA 58.300 37.500 0.00 0.00 0.00 4.92
5473 11661 6.648879 TTCCTATATGTTATTTTGCCTGCC 57.351 37.500 0.00 0.00 0.00 4.85
5474 11662 7.716612 AGTTTCCTATATGTTATTTTGCCTGC 58.283 34.615 0.00 0.00 0.00 4.85
5486 11674 9.448587 AGGATAGGTGTTTAGTTTCCTATATGT 57.551 33.333 0.00 0.00 41.53 2.29
5499 11687 8.472413 GCGGTCATATAATAGGATAGGTGTTTA 58.528 37.037 0.00 0.00 0.00 2.01
5500 11688 7.328737 GCGGTCATATAATAGGATAGGTGTTT 58.671 38.462 0.00 0.00 0.00 2.83
5501 11689 6.127140 GGCGGTCATATAATAGGATAGGTGTT 60.127 42.308 0.00 0.00 0.00 3.32
5502 11690 5.363005 GGCGGTCATATAATAGGATAGGTGT 59.637 44.000 0.00 0.00 0.00 4.16
5503 11691 5.362717 TGGCGGTCATATAATAGGATAGGTG 59.637 44.000 0.00 0.00 0.00 4.00
5504 11692 5.525484 TGGCGGTCATATAATAGGATAGGT 58.475 41.667 0.00 0.00 0.00 3.08
5505 11693 6.295349 GGATGGCGGTCATATAATAGGATAGG 60.295 46.154 0.00 0.00 35.97 2.57
5506 11694 6.267699 TGGATGGCGGTCATATAATAGGATAG 59.732 42.308 0.00 0.00 35.97 2.08
5507 11695 6.140377 TGGATGGCGGTCATATAATAGGATA 58.860 40.000 0.00 0.00 35.97 2.59
5508 11696 4.968719 TGGATGGCGGTCATATAATAGGAT 59.031 41.667 0.00 0.00 35.97 3.24
5509 11697 4.358214 TGGATGGCGGTCATATAATAGGA 58.642 43.478 0.00 0.00 35.97 2.94
5510 11698 4.753516 TGGATGGCGGTCATATAATAGG 57.246 45.455 0.00 0.00 35.97 2.57
5511 11699 5.354234 GGTTTGGATGGCGGTCATATAATAG 59.646 44.000 0.00 0.00 35.97 1.73
5512 11700 5.250200 GGTTTGGATGGCGGTCATATAATA 58.750 41.667 0.00 0.00 35.97 0.98
5513 11701 4.079253 GGTTTGGATGGCGGTCATATAAT 58.921 43.478 0.00 0.00 35.97 1.28
5514 11702 3.482436 GGTTTGGATGGCGGTCATATAA 58.518 45.455 0.00 0.00 35.97 0.98
5515 11703 2.549134 CGGTTTGGATGGCGGTCATATA 60.549 50.000 0.00 0.00 35.97 0.86
5516 11704 1.813862 CGGTTTGGATGGCGGTCATAT 60.814 52.381 0.00 0.00 35.97 1.78
5517 11705 0.462937 CGGTTTGGATGGCGGTCATA 60.463 55.000 0.00 0.00 35.97 2.15
5518 11706 1.748879 CGGTTTGGATGGCGGTCAT 60.749 57.895 0.00 0.00 39.13 3.06
5519 11707 2.359354 CGGTTTGGATGGCGGTCA 60.359 61.111 0.00 0.00 0.00 4.02
5520 11708 3.131478 CCGGTTTGGATGGCGGTC 61.131 66.667 0.00 0.00 42.00 4.79
5521 11709 3.501040 AACCGGTTTGGATGGCGGT 62.501 57.895 15.86 0.00 42.00 5.68
5522 11710 2.675075 AACCGGTTTGGATGGCGG 60.675 61.111 15.86 0.00 42.00 6.13
5523 11711 1.519751 TTCAACCGGTTTGGATGGCG 61.520 55.000 19.55 3.62 40.78 5.69
5524 11712 0.243636 CTTCAACCGGTTTGGATGGC 59.756 55.000 19.55 0.00 40.78 4.40
5525 11713 1.904287 TCTTCAACCGGTTTGGATGG 58.096 50.000 19.55 5.30 40.78 3.51
5526 11714 3.065371 GCTATCTTCAACCGGTTTGGATG 59.935 47.826 19.55 14.79 41.73 3.51
5527 11715 3.279434 GCTATCTTCAACCGGTTTGGAT 58.721 45.455 19.55 21.16 42.00 3.41
5528 11716 2.617021 GGCTATCTTCAACCGGTTTGGA 60.617 50.000 19.55 15.86 42.00 3.53
5529 11717 1.743394 GGCTATCTTCAACCGGTTTGG 59.257 52.381 19.55 7.84 46.41 3.28
5530 11718 1.743394 GGGCTATCTTCAACCGGTTTG 59.257 52.381 19.55 13.53 36.42 2.93
5531 11719 1.677820 CGGGCTATCTTCAACCGGTTT 60.678 52.381 19.55 5.23 40.79 3.27
5532 11720 0.107848 CGGGCTATCTTCAACCGGTT 60.108 55.000 15.86 15.86 40.79 4.44
5533 11721 1.520666 CGGGCTATCTTCAACCGGT 59.479 57.895 0.00 0.00 40.79 5.28
5534 11722 4.438346 CGGGCTATCTTCAACCGG 57.562 61.111 0.00 0.00 40.79 5.28
5536 11724 2.394604 GCACGGGCTATCTTCAACC 58.605 57.895 0.00 0.00 36.96 3.77
5547 11735 4.509737 GGAGACGGTAGCACGGGC 62.510 72.222 0.00 0.00 38.39 6.13
5548 11736 3.834799 GGGAGACGGTAGCACGGG 61.835 72.222 0.00 0.00 38.39 5.28
5549 11737 2.351336 GATGGGAGACGGTAGCACGG 62.351 65.000 0.00 0.00 38.39 4.94
5550 11738 1.065928 GATGGGAGACGGTAGCACG 59.934 63.158 0.00 0.00 40.31 5.34
5551 11739 1.065928 CGATGGGAGACGGTAGCAC 59.934 63.158 0.00 0.00 0.00 4.40
5552 11740 2.125326 CCGATGGGAGACGGTAGCA 61.125 63.158 0.00 0.00 43.53 3.49
5553 11741 2.728817 CCGATGGGAGACGGTAGC 59.271 66.667 0.00 0.00 43.53 3.58
5570 11758 5.703130 GGAGCATTTGGTTACTGGATCTATC 59.297 44.000 0.00 0.00 0.00 2.08
5571 11759 5.456763 GGGAGCATTTGGTTACTGGATCTAT 60.457 44.000 0.00 0.00 0.00 1.98
5572 11760 4.141482 GGGAGCATTTGGTTACTGGATCTA 60.141 45.833 0.00 0.00 0.00 1.98
5573 11761 3.372025 GGGAGCATTTGGTTACTGGATCT 60.372 47.826 0.00 0.00 0.00 2.75
5574 11762 2.952310 GGGAGCATTTGGTTACTGGATC 59.048 50.000 0.00 0.00 0.00 3.36
5575 11763 2.582636 AGGGAGCATTTGGTTACTGGAT 59.417 45.455 0.00 0.00 0.00 3.41
5576 11764 1.992557 AGGGAGCATTTGGTTACTGGA 59.007 47.619 0.00 0.00 0.00 3.86
5577 11765 2.094675 CAGGGAGCATTTGGTTACTGG 58.905 52.381 6.70 0.00 0.00 4.00
5578 11766 2.749621 GTCAGGGAGCATTTGGTTACTG 59.250 50.000 7.77 7.77 33.73 2.74
5579 11767 2.290960 GGTCAGGGAGCATTTGGTTACT 60.291 50.000 0.00 0.00 0.00 2.24
5580 11768 2.092323 GGTCAGGGAGCATTTGGTTAC 58.908 52.381 0.00 0.00 0.00 2.50
5581 11769 1.992557 AGGTCAGGGAGCATTTGGTTA 59.007 47.619 0.00 0.00 31.89 2.85
5582 11770 0.779997 AGGTCAGGGAGCATTTGGTT 59.220 50.000 0.00 0.00 31.89 3.67
5583 11771 0.329596 GAGGTCAGGGAGCATTTGGT 59.670 55.000 0.00 0.00 31.89 3.67
5584 11772 0.394899 GGAGGTCAGGGAGCATTTGG 60.395 60.000 0.00 0.00 31.89 3.28
5585 11773 0.745845 CGGAGGTCAGGGAGCATTTG 60.746 60.000 0.00 0.00 31.89 2.32
5586 11774 1.201429 ACGGAGGTCAGGGAGCATTT 61.201 55.000 0.00 0.00 31.89 2.32
5587 11775 1.613630 ACGGAGGTCAGGGAGCATT 60.614 57.895 0.00 0.00 31.89 3.56
5588 11776 2.039624 ACGGAGGTCAGGGAGCAT 59.960 61.111 0.00 0.00 31.89 3.79
5589 11777 2.680352 GACGGAGGTCAGGGAGCA 60.680 66.667 0.00 0.00 42.91 4.26
5590 11778 2.363147 AGACGGAGGTCAGGGAGC 60.363 66.667 0.00 0.00 45.92 4.70
5591 11779 1.000771 TCAGACGGAGGTCAGGGAG 60.001 63.158 0.00 0.00 45.92 4.30
5592 11780 1.000771 CTCAGACGGAGGTCAGGGA 60.001 63.158 0.00 0.00 45.92 4.20
5593 11781 3.609703 CTCAGACGGAGGTCAGGG 58.390 66.667 0.00 0.00 45.92 4.45
5601 11789 0.036671 TCGCTACTCACTCAGACGGA 60.037 55.000 0.00 0.00 0.00 4.69
5602 11790 0.097325 GTCGCTACTCACTCAGACGG 59.903 60.000 0.00 0.00 0.00 4.79
5603 11791 0.097325 GGTCGCTACTCACTCAGACG 59.903 60.000 0.00 0.00 0.00 4.18
5604 11792 1.135632 GTGGTCGCTACTCACTCAGAC 60.136 57.143 3.71 0.00 0.00 3.51
5605 11793 1.166129 GTGGTCGCTACTCACTCAGA 58.834 55.000 3.71 0.00 0.00 3.27
5606 11794 0.881796 TGTGGTCGCTACTCACTCAG 59.118 55.000 10.01 0.00 31.73 3.35
5607 11795 1.545841 ATGTGGTCGCTACTCACTCA 58.454 50.000 10.01 0.00 31.73 3.41
5608 11796 2.539142 CGTATGTGGTCGCTACTCACTC 60.539 54.545 10.01 3.07 31.73 3.51
5609 11797 1.400846 CGTATGTGGTCGCTACTCACT 59.599 52.381 10.01 1.88 31.73 3.41
5610 11798 1.533338 CCGTATGTGGTCGCTACTCAC 60.533 57.143 3.91 3.91 0.00 3.51
5611 11799 0.736636 CCGTATGTGGTCGCTACTCA 59.263 55.000 0.00 0.00 0.00 3.41
5612 11800 0.030369 CCCGTATGTGGTCGCTACTC 59.970 60.000 0.00 0.00 0.00 2.59
5613 11801 0.682209 ACCCGTATGTGGTCGCTACT 60.682 55.000 0.00 0.00 0.00 2.57
5614 11802 0.526954 CACCCGTATGTGGTCGCTAC 60.527 60.000 0.00 0.00 32.46 3.58
5615 11803 0.680601 TCACCCGTATGTGGTCGCTA 60.681 55.000 0.00 0.00 36.87 4.26
5616 11804 1.945354 CTCACCCGTATGTGGTCGCT 61.945 60.000 0.00 0.00 36.87 4.93
5617 11805 1.518572 CTCACCCGTATGTGGTCGC 60.519 63.158 0.00 0.00 36.87 5.19
5618 11806 0.457853 CACTCACCCGTATGTGGTCG 60.458 60.000 0.00 0.00 36.87 4.79
5619 11807 0.606604 ACACTCACCCGTATGTGGTC 59.393 55.000 0.00 0.00 36.87 4.02
5620 11808 1.822990 CTACACTCACCCGTATGTGGT 59.177 52.381 0.00 0.00 36.87 4.16
5621 11809 1.822990 ACTACACTCACCCGTATGTGG 59.177 52.381 0.00 0.00 36.87 4.17
5622 11810 2.416836 CCACTACACTCACCCGTATGTG 60.417 54.545 0.00 0.00 37.59 3.21
5623 11811 1.822990 CCACTACACTCACCCGTATGT 59.177 52.381 0.00 0.00 0.00 2.29
5624 11812 1.470979 GCCACTACACTCACCCGTATG 60.471 57.143 0.00 0.00 0.00 2.39
5625 11813 0.822164 GCCACTACACTCACCCGTAT 59.178 55.000 0.00 0.00 0.00 3.06
5626 11814 1.252904 GGCCACTACACTCACCCGTA 61.253 60.000 0.00 0.00 0.00 4.02
5627 11815 2.580601 GGCCACTACACTCACCCGT 61.581 63.158 0.00 0.00 0.00 5.28
5628 11816 2.264794 GGCCACTACACTCACCCG 59.735 66.667 0.00 0.00 0.00 5.28
5629 11817 1.192146 TCAGGCCACTACACTCACCC 61.192 60.000 5.01 0.00 0.00 4.61
5630 11818 0.685097 TTCAGGCCACTACACTCACC 59.315 55.000 5.01 0.00 0.00 4.02
5631 11819 1.618837 TCTTCAGGCCACTACACTCAC 59.381 52.381 5.01 0.00 0.00 3.51
5632 11820 1.618837 GTCTTCAGGCCACTACACTCA 59.381 52.381 5.01 0.00 0.00 3.41
5633 11821 1.618837 TGTCTTCAGGCCACTACACTC 59.381 52.381 5.01 0.00 0.00 3.51
5634 11822 1.717032 TGTCTTCAGGCCACTACACT 58.283 50.000 5.01 0.00 0.00 3.55
5635 11823 2.143925 GTTGTCTTCAGGCCACTACAC 58.856 52.381 5.01 0.00 0.00 2.90
5636 11824 1.071699 GGTTGTCTTCAGGCCACTACA 59.928 52.381 5.01 0.00 0.00 2.74
5637 11825 1.348036 AGGTTGTCTTCAGGCCACTAC 59.652 52.381 5.01 0.26 0.00 2.73
5638 11826 1.347707 CAGGTTGTCTTCAGGCCACTA 59.652 52.381 5.01 0.00 0.00 2.74
5639 11827 0.109342 CAGGTTGTCTTCAGGCCACT 59.891 55.000 5.01 0.00 0.00 4.00
5640 11828 1.518903 GCAGGTTGTCTTCAGGCCAC 61.519 60.000 5.01 0.00 0.00 5.01
5641 11829 1.228245 GCAGGTTGTCTTCAGGCCA 60.228 57.895 5.01 0.00 0.00 5.36
5642 11830 2.328099 CGCAGGTTGTCTTCAGGCC 61.328 63.158 0.00 0.00 0.00 5.19
5643 11831 3.257933 CGCAGGTTGTCTTCAGGC 58.742 61.111 0.00 0.00 0.00 4.85
5656 11844 5.569413 GTTAACACTATTCATTTCCCGCAG 58.431 41.667 0.00 0.00 0.00 5.18
5657 11845 4.093703 CGTTAACACTATTCATTTCCCGCA 59.906 41.667 6.39 0.00 0.00 5.69
5658 11846 4.093850 ACGTTAACACTATTCATTTCCCGC 59.906 41.667 6.39 0.00 0.00 6.13
5659 11847 5.789710 ACGTTAACACTATTCATTTCCCG 57.210 39.130 6.39 0.00 0.00 5.14
5660 11848 8.724229 AGTAAACGTTAACACTATTCATTTCCC 58.276 33.333 0.00 0.00 0.00 3.97
5663 11851 9.389570 GCAAGTAAACGTTAACACTATTCATTT 57.610 29.630 0.00 0.00 0.00 2.32
5664 11852 8.561212 TGCAAGTAAACGTTAACACTATTCATT 58.439 29.630 0.00 0.00 0.00 2.57
5665 11853 8.090250 TGCAAGTAAACGTTAACACTATTCAT 57.910 30.769 0.00 0.00 0.00 2.57
5666 11854 7.479897 TGCAAGTAAACGTTAACACTATTCA 57.520 32.000 0.00 2.56 0.00 2.57
5667 11855 7.691050 GGATGCAAGTAAACGTTAACACTATTC 59.309 37.037 0.00 2.01 0.00 1.75
5668 11856 7.389607 AGGATGCAAGTAAACGTTAACACTATT 59.610 33.333 0.00 0.00 0.00 1.73
5669 11857 6.877322 AGGATGCAAGTAAACGTTAACACTAT 59.123 34.615 0.00 0.00 0.00 2.12
5670 11858 6.225318 AGGATGCAAGTAAACGTTAACACTA 58.775 36.000 0.00 0.00 0.00 2.74
5671 11859 5.061179 AGGATGCAAGTAAACGTTAACACT 58.939 37.500 0.00 2.58 0.00 3.55
5672 11860 5.352643 AGGATGCAAGTAAACGTTAACAC 57.647 39.130 0.00 0.00 0.00 3.32
5673 11861 6.930164 TCTAAGGATGCAAGTAAACGTTAACA 59.070 34.615 0.00 0.00 0.00 2.41
5674 11862 7.232300 GTCTAAGGATGCAAGTAAACGTTAAC 58.768 38.462 0.00 0.00 0.00 2.01
5675 11863 6.369615 GGTCTAAGGATGCAAGTAAACGTTAA 59.630 38.462 0.00 0.00 0.00 2.01
5676 11864 5.870978 GGTCTAAGGATGCAAGTAAACGTTA 59.129 40.000 0.00 0.00 0.00 3.18
5677 11865 4.694037 GGTCTAAGGATGCAAGTAAACGTT 59.306 41.667 0.00 0.00 0.00 3.99
5678 11866 4.251268 GGTCTAAGGATGCAAGTAAACGT 58.749 43.478 0.00 0.00 0.00 3.99
5679 11867 4.250464 TGGTCTAAGGATGCAAGTAAACG 58.750 43.478 0.00 0.00 0.00 3.60
5680 11868 5.880332 TCATGGTCTAAGGATGCAAGTAAAC 59.120 40.000 0.00 0.00 0.00 2.01
5681 11869 6.061022 TCATGGTCTAAGGATGCAAGTAAA 57.939 37.500 0.00 0.00 0.00 2.01
5682 11870 5.189736 ACTCATGGTCTAAGGATGCAAGTAA 59.810 40.000 0.00 0.00 0.00 2.24
5683 11871 4.716784 ACTCATGGTCTAAGGATGCAAGTA 59.283 41.667 0.00 0.00 0.00 2.24
5684 11872 3.521126 ACTCATGGTCTAAGGATGCAAGT 59.479 43.478 0.00 0.00 0.00 3.16
5685 11873 4.125703 GACTCATGGTCTAAGGATGCAAG 58.874 47.826 0.00 0.00 41.46 4.01
5686 11874 3.519107 TGACTCATGGTCTAAGGATGCAA 59.481 43.478 13.32 0.00 44.74 4.08
5687 11875 3.106827 TGACTCATGGTCTAAGGATGCA 58.893 45.455 13.32 0.00 44.74 3.96
5688 11876 3.827008 TGACTCATGGTCTAAGGATGC 57.173 47.619 13.32 0.00 44.74 3.91
5689 11877 6.295011 GGTCTATGACTCATGGTCTAAGGATG 60.295 46.154 13.32 0.00 44.74 3.51
5690 11878 5.777732 GGTCTATGACTCATGGTCTAAGGAT 59.222 44.000 13.32 3.80 44.74 3.24
5691 11879 5.141182 GGTCTATGACTCATGGTCTAAGGA 58.859 45.833 13.32 6.10 44.74 3.36
5692 11880 4.282195 GGGTCTATGACTCATGGTCTAAGG 59.718 50.000 13.32 4.48 44.74 2.69
5693 11881 4.022762 CGGGTCTATGACTCATGGTCTAAG 60.023 50.000 13.32 10.75 44.74 2.18
5694 11882 3.889538 CGGGTCTATGACTCATGGTCTAA 59.110 47.826 13.32 3.71 44.74 2.10
5695 11883 3.487372 CGGGTCTATGACTCATGGTCTA 58.513 50.000 13.32 3.64 44.74 2.59
5696 11884 2.311463 CGGGTCTATGACTCATGGTCT 58.689 52.381 13.32 4.62 44.74 3.85
5697 11885 1.341531 CCGGGTCTATGACTCATGGTC 59.658 57.143 1.42 7.22 44.70 4.02
5698 11886 1.063190 TCCGGGTCTATGACTCATGGT 60.063 52.381 0.00 0.00 31.52 3.55
5699 11887 1.704641 TCCGGGTCTATGACTCATGG 58.295 55.000 0.00 0.00 31.52 3.66
5700 11888 4.201960 CGATATCCGGGTCTATGACTCATG 60.202 50.000 0.00 0.00 31.52 3.07
5701 11889 3.948473 CGATATCCGGGTCTATGACTCAT 59.052 47.826 0.00 0.00 31.52 2.90
5702 11890 3.344515 CGATATCCGGGTCTATGACTCA 58.655 50.000 0.00 0.00 31.52 3.41
5715 11903 3.994392 CCAAAGTAACCATCCGATATCCG 59.006 47.826 0.00 0.00 38.18 4.18
5716 11904 4.324267 CCCAAAGTAACCATCCGATATCC 58.676 47.826 0.00 0.00 0.00 2.59
5717 11905 4.202430 ACCCCAAAGTAACCATCCGATATC 60.202 45.833 0.00 0.00 0.00 1.63
5718 11906 3.720002 ACCCCAAAGTAACCATCCGATAT 59.280 43.478 0.00 0.00 0.00 1.63
5719 11907 3.116959 ACCCCAAAGTAACCATCCGATA 58.883 45.455 0.00 0.00 0.00 2.92
5720 11908 1.920351 ACCCCAAAGTAACCATCCGAT 59.080 47.619 0.00 0.00 0.00 4.18
5721 11909 1.364269 ACCCCAAAGTAACCATCCGA 58.636 50.000 0.00 0.00 0.00 4.55
5722 11910 1.816224 CAACCCCAAAGTAACCATCCG 59.184 52.381 0.00 0.00 0.00 4.18
5723 11911 1.548719 GCAACCCCAAAGTAACCATCC 59.451 52.381 0.00 0.00 0.00 3.51
5724 11912 1.548719 GGCAACCCCAAAGTAACCATC 59.451 52.381 0.00 0.00 0.00 3.51
5725 11913 1.133009 TGGCAACCCCAAAGTAACCAT 60.133 47.619 0.00 0.00 41.82 3.55
5726 11914 0.261991 TGGCAACCCCAAAGTAACCA 59.738 50.000 0.00 0.00 41.82 3.67
5727 11915 3.135027 TGGCAACCCCAAAGTAACC 57.865 52.632 0.00 0.00 41.82 2.85
5735 11923 2.243810 GAGTAACATTTGGCAACCCCA 58.756 47.619 0.00 0.00 43.51 4.96
5736 11924 1.548719 GGAGTAACATTTGGCAACCCC 59.451 52.381 0.00 0.00 0.00 4.95
5737 11925 1.201414 CGGAGTAACATTTGGCAACCC 59.799 52.381 0.00 0.00 0.00 4.11
5738 11926 1.883926 ACGGAGTAACATTTGGCAACC 59.116 47.619 0.00 0.00 41.94 3.77
5753 11941 6.924060 CACCTTAAAATCACCTAGATACGGAG 59.076 42.308 0.00 0.00 35.39 4.63
5754 11942 6.608405 TCACCTTAAAATCACCTAGATACGGA 59.392 38.462 0.00 0.00 35.39 4.69
5755 11943 6.700520 GTCACCTTAAAATCACCTAGATACGG 59.299 42.308 0.00 0.00 35.39 4.02
5756 11944 7.490000 AGTCACCTTAAAATCACCTAGATACG 58.510 38.462 0.00 0.00 35.39 3.06
5757 11945 9.668497 AAAGTCACCTTAAAATCACCTAGATAC 57.332 33.333 0.00 0.00 35.39 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.