Multiple sequence alignment - TraesCS2B01G125800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G125800 chr2B 100.000 3148 0 0 1 3148 94035351 94032204 0.000000e+00 5814.0
1 TraesCS2B01G125800 chr2B 92.992 2226 87 25 1 2196 94225971 94223785 0.000000e+00 3182.0
2 TraesCS2B01G125800 chr2B 86.230 2135 188 53 234 2280 93111170 93113286 0.000000e+00 2217.0
3 TraesCS2B01G125800 chr2B 87.822 1281 119 23 943 2195 93440449 93441720 0.000000e+00 1467.0
4 TraesCS2B01G125800 chr2B 78.261 575 102 15 1582 2137 94202750 94202180 6.460000e-92 348.0
5 TraesCS2B01G125800 chr2B 92.208 77 4 1 683 759 93438964 93439038 1.190000e-19 108.0
6 TraesCS2B01G125800 chr2B 79.021 143 19 6 30 161 93425917 93426059 1.560000e-13 87.9
7 TraesCS2B01G125800 chr2D 94.122 2518 81 23 1 2492 60139943 60137467 0.000000e+00 3768.0
8 TraesCS2B01G125800 chr2D 86.027 2054 179 63 234 2203 59726289 59728318 0.000000e+00 2104.0
9 TraesCS2B01G125800 chr2D 85.944 683 60 22 840 1509 59845410 59846069 0.000000e+00 697.0
10 TraesCS2B01G125800 chr2D 76.637 779 143 29 1384 2148 59724710 59725463 8.180000e-106 394.0
11 TraesCS2B01G125800 chr2D 80.568 458 70 12 1043 1500 60016134 60015696 5.030000e-88 335.0
12 TraesCS2B01G125800 chr2D 100.000 97 0 0 2497 2593 132689862 132689958 2.490000e-41 180.0
13 TraesCS2B01G125800 chr2A 89.738 1715 126 30 758 2460 60712035 60710359 0.000000e+00 2146.0
14 TraesCS2B01G125800 chr2A 91.007 745 53 4 1720 2460 60249051 60248317 0.000000e+00 992.0
15 TraesCS2B01G125800 chr2A 86.454 908 70 23 675 1551 59723171 59724056 0.000000e+00 946.0
16 TraesCS2B01G125800 chr2A 89.211 760 57 11 1545 2280 59724410 59725168 0.000000e+00 926.0
17 TraesCS2B01G125800 chr2A 90.594 606 34 7 1 603 60712842 60712257 0.000000e+00 782.0
18 TraesCS2B01G125800 chr2A 83.203 256 21 7 234 467 59721257 59721512 6.840000e-52 215.0
19 TraesCS2B01G125800 chr2A 82.063 223 32 7 1011 1228 60195804 60195585 1.930000e-42 183.0
20 TraesCS2B01G125800 chr5D 98.969 97 1 0 2497 2593 332803565 332803469 1.160000e-39 174.0
21 TraesCS2B01G125800 chr5D 97.938 97 2 0 2497 2593 459243346 459243442 5.400000e-38 169.0
22 TraesCS2B01G125800 chr1A 98.936 94 1 0 2500 2593 492269460 492269367 5.400000e-38 169.0
23 TraesCS2B01G125800 chr1A 96.907 97 3 0 2497 2593 565061165 565061069 2.510000e-36 163.0
24 TraesCS2B01G125800 chr6A 96.907 97 3 0 2497 2593 612192936 612193032 2.510000e-36 163.0
25 TraesCS2B01G125800 chr6B 96.842 95 3 0 2497 2591 647475406 647475500 3.250000e-35 159.0
26 TraesCS2B01G125800 chr3B 95.918 98 4 0 2497 2594 33098027 33098124 3.250000e-35 159.0
27 TraesCS2B01G125800 chr3A 95.876 97 4 0 2497 2593 602270808 602270712 1.170000e-34 158.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G125800 chr2B 94032204 94035351 3147 True 5814.000000 5814 100.000000 1 3148 1 chr2B.!!$R1 3147
1 TraesCS2B01G125800 chr2B 94223785 94225971 2186 True 3182.000000 3182 92.992000 1 2196 1 chr2B.!!$R3 2195
2 TraesCS2B01G125800 chr2B 93111170 93113286 2116 False 2217.000000 2217 86.230000 234 2280 1 chr2B.!!$F1 2046
3 TraesCS2B01G125800 chr2B 93438964 93441720 2756 False 787.500000 1467 90.015000 683 2195 2 chr2B.!!$F3 1512
4 TraesCS2B01G125800 chr2B 94202180 94202750 570 True 348.000000 348 78.261000 1582 2137 1 chr2B.!!$R2 555
5 TraesCS2B01G125800 chr2D 60137467 60139943 2476 True 3768.000000 3768 94.122000 1 2492 1 chr2D.!!$R2 2491
6 TraesCS2B01G125800 chr2D 59724710 59728318 3608 False 1249.000000 2104 81.332000 234 2203 2 chr2D.!!$F3 1969
7 TraesCS2B01G125800 chr2D 59845410 59846069 659 False 697.000000 697 85.944000 840 1509 1 chr2D.!!$F1 669
8 TraesCS2B01G125800 chr2A 60710359 60712842 2483 True 1464.000000 2146 90.166000 1 2460 2 chr2A.!!$R3 2459
9 TraesCS2B01G125800 chr2A 60248317 60249051 734 True 992.000000 992 91.007000 1720 2460 1 chr2A.!!$R2 740
10 TraesCS2B01G125800 chr2A 59721257 59725168 3911 False 695.666667 946 86.289333 234 2280 3 chr2A.!!$F1 2046

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
987 5127 1.254954 GTCCCTCACTAGACGTTGGT 58.745 55.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2680 7286 0.031585 CTGTATTGGCGCGTAGGCTA 59.968 55.0 8.43 0.0 46.88 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 136 4.082733 GCTATCAGTCCATGTATAGTCGCA 60.083 45.833 0.00 0.00 0.00 5.10
192 194 8.226819 TCGGTCCACATGCATTATTATTAAAA 57.773 30.769 0.00 0.00 0.00 1.52
241 1588 5.040635 GTCTCTGTATTTGCAGTCTCTAGC 58.959 45.833 0.00 0.00 37.70 3.42
388 1759 6.286758 AGATAGATGAATGATTTGCACGACT 58.713 36.000 0.00 0.00 0.00 4.18
509 2048 2.413837 ACTAGCAAAAGTACCAGTGCG 58.586 47.619 6.61 0.00 41.90 5.34
531 2070 3.479269 GTAGGTGCACAGCGCGAC 61.479 66.667 20.43 0.04 46.97 5.19
540 2083 4.505217 CAGCGCGACGAACCATGC 62.505 66.667 12.10 0.00 0.00 4.06
550 2093 2.548057 GACGAACCATGCTCTTGTTTCA 59.452 45.455 0.00 0.00 0.00 2.69
551 2094 2.948979 ACGAACCATGCTCTTGTTTCAA 59.051 40.909 0.00 0.00 0.00 2.69
659 2240 9.226606 CCCATGAGTTAGTACAAAATAAACTGA 57.773 33.333 0.00 0.00 30.83 3.41
677 2262 4.878439 ACTGAACACACGTCAAGCTATAA 58.122 39.130 0.00 0.00 0.00 0.98
679 2264 6.627243 ACTGAACACACGTCAAGCTATAATA 58.373 36.000 0.00 0.00 0.00 0.98
767 3713 7.999450 TTGCAGTATTATATTCCATGCATGA 57.001 32.000 28.31 9.57 41.36 3.07
769 3715 8.047413 TGCAGTATTATATTCCATGCATGAAG 57.953 34.615 28.31 12.34 37.28 3.02
791 3737 1.677633 GTTGCACCATAACGGCCCT 60.678 57.895 0.00 0.00 39.03 5.19
987 5127 1.254954 GTCCCTCACTAGACGTTGGT 58.745 55.000 0.00 0.00 0.00 3.67
994 5136 4.495422 CTCACTAGACGTTGGTTAGCAAT 58.505 43.478 0.00 0.00 0.00 3.56
1216 5358 3.577649 TCGTCCAAGTAAGCTCTTCAG 57.422 47.619 0.00 0.00 0.00 3.02
1222 5364 6.858993 CGTCCAAGTAAGCTCTTCAGATATAC 59.141 42.308 0.00 0.00 0.00 1.47
1223 5365 7.255312 CGTCCAAGTAAGCTCTTCAGATATACT 60.255 40.741 0.00 0.00 0.00 2.12
1224 5366 8.079809 GTCCAAGTAAGCTCTTCAGATATACTC 58.920 40.741 0.00 0.00 0.00 2.59
1286 5470 4.692625 GCATGCTTCTTGAGTCTTGAGTTA 59.307 41.667 11.37 0.00 0.00 2.24
1303 5487 4.096833 TGAGTTATTGACCATGCATGCTTC 59.903 41.667 21.69 18.38 0.00 3.86
1340 5525 0.386858 GTGACGCGTCTGTTCTGCTA 60.387 55.000 36.27 13.21 0.00 3.49
1540 5725 2.231478 CGTGATCACCACCAAGTAGACT 59.769 50.000 20.03 0.00 42.76 3.24
1553 6098 5.045869 ACCAAGTAGACTGGCTAATTTGCTA 60.046 40.000 11.61 4.81 35.36 3.49
1557 6102 4.301072 AGACTGGCTAATTTGCTAACCA 57.699 40.909 11.61 0.73 0.00 3.67
1562 6107 4.545678 TGGCTAATTTGCTAACCATGGAT 58.454 39.130 21.47 9.83 0.00 3.41
1563 6108 4.961730 TGGCTAATTTGCTAACCATGGATT 59.038 37.500 21.47 11.61 0.00 3.01
1564 6109 5.424895 TGGCTAATTTGCTAACCATGGATTT 59.575 36.000 21.47 5.69 0.00 2.17
1565 6110 6.070309 TGGCTAATTTGCTAACCATGGATTTT 60.070 34.615 21.47 4.85 0.00 1.82
1566 6111 6.823182 GGCTAATTTGCTAACCATGGATTTTT 59.177 34.615 21.47 4.43 0.00 1.94
1979 6554 2.262915 CTGCACTCCGACCAGGTC 59.737 66.667 9.92 9.92 41.99 3.85
2035 6613 1.466855 GTCAACAACTTCGCAAGCAC 58.533 50.000 0.00 0.00 37.18 4.40
2101 6679 3.154589 GGAACCTTAGCCCGTTGAG 57.845 57.895 0.00 0.00 0.00 3.02
2148 6726 3.507233 CAGCTGCTCCAAGGTGAATTAAA 59.493 43.478 0.00 0.00 46.34 1.52
2341 6943 6.980397 GGCAACTTCCCTTTTTGTGATATATG 59.020 38.462 0.00 0.00 0.00 1.78
2368 6970 9.197694 ACAGACTTCTACGATATGAATTATTGC 57.802 33.333 0.00 0.00 0.00 3.56
2434 7040 4.301072 TTGTGAAAAGGAGGGAGTATGG 57.699 45.455 0.00 0.00 0.00 2.74
2460 7066 7.918562 GCTTTGGTCAAATTTGTAGTCAAAGTA 59.081 33.333 29.82 15.34 45.01 2.24
2492 7098 8.758829 CAAAATATAAGAGGGCCCTTTAAACTT 58.241 33.333 29.39 25.15 0.00 2.66
2493 7099 8.534954 AAATATAAGAGGGCCCTTTAAACTTC 57.465 34.615 29.39 10.94 0.00 3.01
2494 7100 5.798239 ATAAGAGGGCCCTTTAAACTTCT 57.202 39.130 29.39 13.45 0.00 2.85
2495 7101 4.471078 AAGAGGGCCCTTTAAACTTCTT 57.529 40.909 29.39 19.05 0.00 2.52
2496 7102 3.767711 AGAGGGCCCTTTAAACTTCTTG 58.232 45.455 29.39 0.00 0.00 3.02
2497 7103 2.826128 GAGGGCCCTTTAAACTTCTTGG 59.174 50.000 29.39 0.00 0.00 3.61
2498 7104 1.275291 GGGCCCTTTAAACTTCTTGGC 59.725 52.381 17.04 0.00 36.68 4.52
2499 7105 2.248248 GGCCCTTTAAACTTCTTGGCT 58.752 47.619 0.00 0.00 37.55 4.75
2500 7106 2.632996 GGCCCTTTAAACTTCTTGGCTT 59.367 45.455 0.00 0.00 37.55 4.35
2501 7107 3.554960 GGCCCTTTAAACTTCTTGGCTTG 60.555 47.826 0.00 0.00 37.55 4.01
2502 7108 3.653344 CCCTTTAAACTTCTTGGCTTGC 58.347 45.455 0.00 0.00 0.00 4.01
2503 7109 3.321968 CCCTTTAAACTTCTTGGCTTGCT 59.678 43.478 0.00 0.00 0.00 3.91
2504 7110 4.550422 CCTTTAAACTTCTTGGCTTGCTC 58.450 43.478 0.00 0.00 0.00 4.26
2505 7111 4.550422 CTTTAAACTTCTTGGCTTGCTCC 58.450 43.478 0.00 0.00 0.00 4.70
2506 7112 2.071778 AAACTTCTTGGCTTGCTCCA 57.928 45.000 0.00 0.00 0.00 3.86
2507 7113 1.613836 AACTTCTTGGCTTGCTCCAG 58.386 50.000 0.00 0.00 37.44 3.86
2508 7114 0.251077 ACTTCTTGGCTTGCTCCAGG 60.251 55.000 0.00 0.00 37.44 4.45
2509 7115 1.593296 CTTCTTGGCTTGCTCCAGGC 61.593 60.000 0.00 0.00 37.44 4.85
2518 7124 2.034687 GCTCCAGGCAGCCAAGAA 59.965 61.111 15.80 0.00 41.35 2.52
2519 7125 2.045131 GCTCCAGGCAGCCAAGAAG 61.045 63.158 15.80 6.49 41.35 2.85
2520 7126 1.378250 CTCCAGGCAGCCAAGAAGG 60.378 63.158 15.80 7.37 41.84 3.46
2521 7127 2.134630 CTCCAGGCAGCCAAGAAGGT 62.135 60.000 15.80 0.00 40.61 3.50
2522 7128 1.676967 CCAGGCAGCCAAGAAGGTC 60.677 63.158 15.80 0.00 40.61 3.85
2523 7129 2.037136 CAGGCAGCCAAGAAGGTCG 61.037 63.158 15.80 0.00 40.61 4.79
2524 7130 2.217038 AGGCAGCCAAGAAGGTCGA 61.217 57.895 15.80 0.00 40.61 4.20
2525 7131 1.743252 GGCAGCCAAGAAGGTCGAG 60.743 63.158 6.55 0.00 40.61 4.04
2526 7132 1.743252 GCAGCCAAGAAGGTCGAGG 60.743 63.158 0.00 0.00 40.61 4.63
2527 7133 1.975327 CAGCCAAGAAGGTCGAGGA 59.025 57.895 0.00 0.00 40.61 3.71
2528 7134 0.321671 CAGCCAAGAAGGTCGAGGAA 59.678 55.000 0.00 0.00 40.61 3.36
2529 7135 0.610687 AGCCAAGAAGGTCGAGGAAG 59.389 55.000 0.00 0.00 40.61 3.46
2530 7136 0.321996 GCCAAGAAGGTCGAGGAAGT 59.678 55.000 0.00 0.00 40.61 3.01
2531 7137 1.673329 GCCAAGAAGGTCGAGGAAGTC 60.673 57.143 0.00 0.00 40.61 3.01
2532 7138 1.066787 CCAAGAAGGTCGAGGAAGTCC 60.067 57.143 0.00 0.00 0.00 3.85
2533 7139 0.889306 AAGAAGGTCGAGGAAGTCCG 59.111 55.000 0.00 0.00 42.08 4.79
2534 7140 0.251253 AGAAGGTCGAGGAAGTCCGT 60.251 55.000 0.00 0.00 42.08 4.69
2535 7141 0.109226 GAAGGTCGAGGAAGTCCGTG 60.109 60.000 0.00 0.00 42.08 4.94
2536 7142 2.126031 GGTCGAGGAAGTCCGTGC 60.126 66.667 0.00 0.00 42.08 5.34
2537 7143 2.126031 GTCGAGGAAGTCCGTGCC 60.126 66.667 0.00 0.00 42.08 5.01
2538 7144 2.599281 TCGAGGAAGTCCGTGCCA 60.599 61.111 0.00 0.00 42.08 4.92
2539 7145 2.432628 CGAGGAAGTCCGTGCCAC 60.433 66.667 0.00 0.00 42.08 5.01
2540 7146 2.932234 CGAGGAAGTCCGTGCCACT 61.932 63.158 0.00 0.00 42.08 4.00
2541 7147 1.079750 GAGGAAGTCCGTGCCACTC 60.080 63.158 0.00 0.00 42.08 3.51
2542 7148 2.047179 GGAAGTCCGTGCCACTCC 60.047 66.667 0.00 0.00 0.00 3.85
2543 7149 2.584391 GGAAGTCCGTGCCACTCCT 61.584 63.158 0.00 0.00 0.00 3.69
2544 7150 1.079750 GAAGTCCGTGCCACTCCTC 60.080 63.158 0.00 0.00 0.00 3.71
2545 7151 2.508586 GAAGTCCGTGCCACTCCTCC 62.509 65.000 0.00 0.00 0.00 4.30
2546 7152 3.311110 GTCCGTGCCACTCCTCCA 61.311 66.667 0.00 0.00 0.00 3.86
2547 7153 2.997315 TCCGTGCCACTCCTCCAG 60.997 66.667 0.00 0.00 0.00 3.86
2548 7154 4.767255 CCGTGCCACTCCTCCAGC 62.767 72.222 0.00 0.00 0.00 4.85
2549 7155 3.699894 CGTGCCACTCCTCCAGCT 61.700 66.667 0.00 0.00 0.00 4.24
2550 7156 2.267324 GTGCCACTCCTCCAGCTC 59.733 66.667 0.00 0.00 0.00 4.09
2551 7157 3.005539 TGCCACTCCTCCAGCTCC 61.006 66.667 0.00 0.00 0.00 4.70
2552 7158 3.005539 GCCACTCCTCCAGCTCCA 61.006 66.667 0.00 0.00 0.00 3.86
2553 7159 2.985456 CCACTCCTCCAGCTCCAC 59.015 66.667 0.00 0.00 0.00 4.02
2554 7160 1.611851 CCACTCCTCCAGCTCCACT 60.612 63.158 0.00 0.00 0.00 4.00
2555 7161 1.197430 CCACTCCTCCAGCTCCACTT 61.197 60.000 0.00 0.00 0.00 3.16
2556 7162 0.248843 CACTCCTCCAGCTCCACTTC 59.751 60.000 0.00 0.00 0.00 3.01
2557 7163 0.116143 ACTCCTCCAGCTCCACTTCT 59.884 55.000 0.00 0.00 0.00 2.85
2558 7164 0.536260 CTCCTCCAGCTCCACTTCTG 59.464 60.000 0.00 0.00 0.00 3.02
2559 7165 0.178921 TCCTCCAGCTCCACTTCTGT 60.179 55.000 0.00 0.00 0.00 3.41
2560 7166 0.036577 CCTCCAGCTCCACTTCTGTG 60.037 60.000 0.00 0.00 43.45 3.66
2561 7167 0.683973 CTCCAGCTCCACTTCTGTGT 59.316 55.000 0.00 0.00 42.34 3.72
2562 7168 1.071385 CTCCAGCTCCACTTCTGTGTT 59.929 52.381 0.00 0.00 42.34 3.32
2563 7169 1.070758 TCCAGCTCCACTTCTGTGTTC 59.929 52.381 0.00 0.00 42.34 3.18
2564 7170 1.202687 CCAGCTCCACTTCTGTGTTCA 60.203 52.381 0.00 0.00 42.34 3.18
2565 7171 2.564771 CAGCTCCACTTCTGTGTTCAA 58.435 47.619 0.00 0.00 42.34 2.69
2566 7172 2.547211 CAGCTCCACTTCTGTGTTCAAG 59.453 50.000 0.00 0.00 42.34 3.02
2567 7173 1.265365 GCTCCACTTCTGTGTTCAAGC 59.735 52.381 0.00 0.00 42.34 4.01
2568 7174 2.564771 CTCCACTTCTGTGTTCAAGCA 58.435 47.619 0.00 0.00 42.34 3.91
2569 7175 2.288666 TCCACTTCTGTGTTCAAGCAC 58.711 47.619 0.00 0.00 42.34 4.40
2570 7176 2.092968 TCCACTTCTGTGTTCAAGCACT 60.093 45.455 0.00 0.00 42.34 4.40
2571 7177 2.032550 CCACTTCTGTGTTCAAGCACTG 59.967 50.000 0.00 0.00 42.34 3.66
2572 7178 2.938451 CACTTCTGTGTTCAAGCACTGA 59.062 45.455 3.14 3.14 42.67 3.41
2575 7181 4.355543 TTCTGTGTTCAAGCACTGAAAC 57.644 40.909 13.94 5.36 46.59 2.78
2576 7182 3.342719 TCTGTGTTCAAGCACTGAAACA 58.657 40.909 3.08 8.67 45.67 2.83
2577 7183 3.126858 TCTGTGTTCAAGCACTGAAACAC 59.873 43.478 16.07 16.07 45.67 3.32
2578 7184 3.081061 TGTGTTCAAGCACTGAAACACT 58.919 40.909 20.33 0.00 45.67 3.55
2579 7185 4.257731 TGTGTTCAAGCACTGAAACACTA 58.742 39.130 20.33 10.54 45.67 2.74
2580 7186 4.332543 TGTGTTCAAGCACTGAAACACTAG 59.667 41.667 20.33 0.00 45.67 2.57
2581 7187 3.312421 TGTTCAAGCACTGAAACACTAGC 59.688 43.478 3.08 0.00 45.67 3.42
2582 7188 3.192541 TCAAGCACTGAAACACTAGCA 57.807 42.857 0.00 0.00 0.00 3.49
2583 7189 3.743521 TCAAGCACTGAAACACTAGCAT 58.256 40.909 0.00 0.00 0.00 3.79
2584 7190 3.748048 TCAAGCACTGAAACACTAGCATC 59.252 43.478 0.00 0.00 0.00 3.91
2585 7191 3.692257 AGCACTGAAACACTAGCATCT 57.308 42.857 0.00 0.00 0.00 2.90
2586 7192 3.332919 AGCACTGAAACACTAGCATCTG 58.667 45.455 0.00 0.00 0.00 2.90
2587 7193 3.070018 GCACTGAAACACTAGCATCTGT 58.930 45.455 0.00 0.00 0.00 3.41
2588 7194 3.120408 GCACTGAAACACTAGCATCTGTG 60.120 47.826 14.67 14.67 41.70 3.66
2598 7204 7.849804 ACACTAGCATCTGTGTTTATAAAGG 57.150 36.000 0.00 0.00 43.88 3.11
2599 7205 6.823689 ACACTAGCATCTGTGTTTATAAAGGG 59.176 38.462 0.00 0.00 43.88 3.95
2600 7206 6.823689 CACTAGCATCTGTGTTTATAAAGGGT 59.176 38.462 0.00 0.00 0.00 4.34
2601 7207 7.985184 CACTAGCATCTGTGTTTATAAAGGGTA 59.015 37.037 0.00 0.00 0.00 3.69
2602 7208 8.204836 ACTAGCATCTGTGTTTATAAAGGGTAG 58.795 37.037 0.00 0.66 0.00 3.18
2603 7209 6.958767 AGCATCTGTGTTTATAAAGGGTAGT 58.041 36.000 0.00 0.00 0.00 2.73
2604 7210 8.086143 AGCATCTGTGTTTATAAAGGGTAGTA 57.914 34.615 0.00 0.00 0.00 1.82
2605 7211 8.714906 AGCATCTGTGTTTATAAAGGGTAGTAT 58.285 33.333 0.00 0.00 0.00 2.12
2606 7212 8.774586 GCATCTGTGTTTATAAAGGGTAGTATG 58.225 37.037 0.00 0.00 0.00 2.39
2607 7213 9.273016 CATCTGTGTTTATAAAGGGTAGTATGG 57.727 37.037 0.00 0.00 0.00 2.74
2608 7214 8.612486 TCTGTGTTTATAAAGGGTAGTATGGA 57.388 34.615 0.00 0.00 0.00 3.41
2609 7215 8.480501 TCTGTGTTTATAAAGGGTAGTATGGAC 58.519 37.037 0.00 0.00 0.00 4.02
2610 7216 7.567458 TGTGTTTATAAAGGGTAGTATGGACC 58.433 38.462 0.00 0.00 36.12 4.46
2611 7217 7.403813 TGTGTTTATAAAGGGTAGTATGGACCT 59.596 37.037 0.00 0.00 37.13 3.85
2612 7218 8.270030 GTGTTTATAAAGGGTAGTATGGACCTT 58.730 37.037 0.00 0.00 44.79 3.50
2615 7221 3.646736 AAGGGTAGTATGGACCTTTGC 57.353 47.619 0.00 0.00 40.25 3.68
2616 7222 2.557869 AGGGTAGTATGGACCTTTGCA 58.442 47.619 0.00 0.00 37.13 4.08
2617 7223 3.123273 AGGGTAGTATGGACCTTTGCAT 58.877 45.455 0.00 0.00 37.57 3.96
2618 7224 4.303794 AGGGTAGTATGGACCTTTGCATA 58.696 43.478 0.00 0.00 35.09 3.14
2619 7225 4.913968 AGGGTAGTATGGACCTTTGCATAT 59.086 41.667 0.00 0.00 38.22 1.78
2620 7226 5.013183 AGGGTAGTATGGACCTTTGCATATC 59.987 44.000 0.00 0.00 38.22 1.63
2621 7227 4.929808 GGTAGTATGGACCTTTGCATATCG 59.070 45.833 0.00 0.00 38.22 2.92
2622 7228 4.689612 AGTATGGACCTTTGCATATCGT 57.310 40.909 0.00 0.00 38.22 3.73
2623 7229 5.801531 AGTATGGACCTTTGCATATCGTA 57.198 39.130 0.00 0.00 38.22 3.43
2624 7230 5.539048 AGTATGGACCTTTGCATATCGTAC 58.461 41.667 0.00 0.00 38.22 3.67
2625 7231 3.897141 TGGACCTTTGCATATCGTACA 57.103 42.857 0.00 0.00 0.00 2.90
2626 7232 3.527533 TGGACCTTTGCATATCGTACAC 58.472 45.455 0.00 0.00 0.00 2.90
2627 7233 3.055747 TGGACCTTTGCATATCGTACACA 60.056 43.478 0.00 0.00 0.00 3.72
2628 7234 3.555956 GGACCTTTGCATATCGTACACAG 59.444 47.826 0.00 0.00 0.00 3.66
2629 7235 4.181578 GACCTTTGCATATCGTACACAGT 58.818 43.478 0.00 0.00 0.00 3.55
2630 7236 4.575885 ACCTTTGCATATCGTACACAGTT 58.424 39.130 0.00 0.00 0.00 3.16
2631 7237 5.001232 ACCTTTGCATATCGTACACAGTTT 58.999 37.500 0.00 0.00 0.00 2.66
2632 7238 5.472137 ACCTTTGCATATCGTACACAGTTTT 59.528 36.000 0.00 0.00 0.00 2.43
2633 7239 6.651643 ACCTTTGCATATCGTACACAGTTTTA 59.348 34.615 0.00 0.00 0.00 1.52
2634 7240 7.335924 ACCTTTGCATATCGTACACAGTTTTAT 59.664 33.333 0.00 0.00 0.00 1.40
2635 7241 8.822855 CCTTTGCATATCGTACACAGTTTTATA 58.177 33.333 0.00 0.00 0.00 0.98
2636 7242 9.632969 CTTTGCATATCGTACACAGTTTTATAC 57.367 33.333 0.00 0.00 0.00 1.47
2637 7243 7.384358 TGCATATCGTACACAGTTTTATACG 57.616 36.000 0.00 0.00 41.31 3.06
2638 7244 6.974048 TGCATATCGTACACAGTTTTATACGT 59.026 34.615 0.00 0.00 40.88 3.57
2639 7245 8.127954 TGCATATCGTACACAGTTTTATACGTA 58.872 33.333 0.00 0.00 40.88 3.57
2640 7246 9.121517 GCATATCGTACACAGTTTTATACGTAT 57.878 33.333 13.54 13.54 40.88 3.06
2645 7251 9.437045 TCGTACACAGTTTTATACGTATGTATG 57.563 33.333 18.37 14.44 41.37 2.39
2646 7252 8.684655 CGTACACAGTTTTATACGTATGTATGG 58.315 37.037 18.37 5.97 41.37 2.74
2647 7253 9.520204 GTACACAGTTTTATACGTATGTATGGT 57.480 33.333 18.37 6.56 41.37 3.55
2648 7254 8.415192 ACACAGTTTTATACGTATGTATGGTG 57.585 34.615 18.37 18.28 41.37 4.17
2649 7255 8.252417 ACACAGTTTTATACGTATGTATGGTGA 58.748 33.333 18.37 0.00 41.37 4.02
2650 7256 9.089601 CACAGTTTTATACGTATGTATGGTGAA 57.910 33.333 18.37 0.00 41.37 3.18
2651 7257 9.826574 ACAGTTTTATACGTATGTATGGTGAAT 57.173 29.630 18.37 0.00 41.37 2.57
2655 7261 8.821147 TTTATACGTATGTATGGTGAATCACC 57.179 34.615 24.68 24.68 43.02 4.02
2656 7262 5.790593 ATACGTATGTATGGTGAATCACCC 58.209 41.667 27.71 14.18 41.98 4.61
2657 7263 5.566032 ATACGTATGTATGGTGAATCACCCG 60.566 44.000 27.71 22.54 41.98 5.28
2658 7264 7.693934 ATACGTATGTATGGTGAATCACCCGA 61.694 42.308 27.71 13.93 41.98 5.14
2659 7265 8.931089 ATACGTATGTATGGTGAATCACCCGAT 61.931 40.741 27.71 18.20 41.98 4.18
2673 7279 2.981859 CCCGATGGGTATATACTGCC 57.018 55.000 12.54 6.98 38.25 4.85
2674 7280 1.136305 CCCGATGGGTATATACTGCCG 59.864 57.143 12.54 10.45 38.25 5.69
2675 7281 1.470979 CCGATGGGTATATACTGCCGC 60.471 57.143 12.54 2.79 0.00 6.53
2676 7282 1.203758 CGATGGGTATATACTGCCGCA 59.796 52.381 12.54 2.01 0.00 5.69
2677 7283 2.159099 CGATGGGTATATACTGCCGCAT 60.159 50.000 12.54 6.59 0.00 4.73
2678 7284 2.760634 TGGGTATATACTGCCGCATG 57.239 50.000 12.54 0.00 0.00 4.06
2679 7285 1.974957 TGGGTATATACTGCCGCATGT 59.025 47.619 12.54 0.00 0.00 3.21
2680 7286 2.370519 TGGGTATATACTGCCGCATGTT 59.629 45.455 12.54 0.00 0.00 2.71
2681 7287 3.579151 TGGGTATATACTGCCGCATGTTA 59.421 43.478 12.54 0.00 0.00 2.41
2682 7288 4.181578 GGGTATATACTGCCGCATGTTAG 58.818 47.826 12.54 0.00 0.00 2.34
2683 7289 3.617263 GGTATATACTGCCGCATGTTAGC 59.383 47.826 12.54 0.00 0.00 3.09
2684 7290 2.163818 TATACTGCCGCATGTTAGCC 57.836 50.000 0.00 0.00 0.00 3.93
2685 7291 0.469917 ATACTGCCGCATGTTAGCCT 59.530 50.000 0.00 0.00 0.00 4.58
2686 7292 1.116308 TACTGCCGCATGTTAGCCTA 58.884 50.000 0.00 0.00 0.00 3.93
2687 7293 0.462047 ACTGCCGCATGTTAGCCTAC 60.462 55.000 0.00 0.00 0.00 3.18
2688 7294 1.490693 CTGCCGCATGTTAGCCTACG 61.491 60.000 0.00 0.00 0.00 3.51
2689 7295 2.882366 GCCGCATGTTAGCCTACGC 61.882 63.158 0.00 0.00 0.00 4.42
2690 7296 2.585869 CCGCATGTTAGCCTACGCG 61.586 63.158 3.53 3.53 41.18 6.01
2691 7297 2.626455 GCATGTTAGCCTACGCGC 59.374 61.111 5.73 0.00 41.18 6.86
2692 7298 2.882366 GCATGTTAGCCTACGCGCC 61.882 63.158 5.73 0.00 41.18 6.53
2693 7299 1.520564 CATGTTAGCCTACGCGCCA 60.521 57.895 5.73 0.00 41.18 5.69
2694 7300 1.087202 CATGTTAGCCTACGCGCCAA 61.087 55.000 5.73 0.00 41.18 4.52
2695 7301 0.179056 ATGTTAGCCTACGCGCCAAT 60.179 50.000 5.73 0.00 41.18 3.16
2696 7302 0.460722 TGTTAGCCTACGCGCCAATA 59.539 50.000 5.73 0.00 41.18 1.90
2697 7303 0.857287 GTTAGCCTACGCGCCAATAC 59.143 55.000 5.73 0.00 41.18 1.89
2698 7304 0.460722 TTAGCCTACGCGCCAATACA 59.539 50.000 5.73 0.00 41.18 2.29
2699 7305 0.031585 TAGCCTACGCGCCAATACAG 59.968 55.000 5.73 0.00 41.18 2.74
2700 7306 1.520787 GCCTACGCGCCAATACAGT 60.521 57.895 5.73 0.00 0.00 3.55
2701 7307 1.087771 GCCTACGCGCCAATACAGTT 61.088 55.000 5.73 0.00 0.00 3.16
2702 7308 1.803625 GCCTACGCGCCAATACAGTTA 60.804 52.381 5.73 0.00 0.00 2.24
2703 7309 2.750948 CCTACGCGCCAATACAGTTAT 58.249 47.619 5.73 0.00 0.00 1.89
2704 7310 3.128349 CCTACGCGCCAATACAGTTATT 58.872 45.455 5.73 0.00 0.00 1.40
2705 7311 3.558418 CCTACGCGCCAATACAGTTATTT 59.442 43.478 5.73 0.00 0.00 1.40
2706 7312 3.398954 ACGCGCCAATACAGTTATTTG 57.601 42.857 5.73 0.00 0.00 2.32
2707 7313 2.108700 CGCGCCAATACAGTTATTTGC 58.891 47.619 0.00 0.00 34.43 3.68
2708 7314 2.477021 CGCGCCAATACAGTTATTTGCA 60.477 45.455 0.00 0.00 36.54 4.08
2709 7315 2.851824 GCGCCAATACAGTTATTTGCAC 59.148 45.455 0.00 0.00 36.54 4.57
2710 7316 3.434637 CGCCAATACAGTTATTTGCACC 58.565 45.455 0.00 0.00 36.54 5.01
2711 7317 3.128589 CGCCAATACAGTTATTTGCACCT 59.871 43.478 0.00 0.00 36.54 4.00
2712 7318 4.380444 CGCCAATACAGTTATTTGCACCTT 60.380 41.667 0.00 0.00 36.54 3.50
2713 7319 5.163703 CGCCAATACAGTTATTTGCACCTTA 60.164 40.000 0.00 0.00 36.54 2.69
2714 7320 6.265577 GCCAATACAGTTATTTGCACCTTAG 58.734 40.000 0.00 0.00 36.68 2.18
2715 7321 6.680378 GCCAATACAGTTATTTGCACCTTAGG 60.680 42.308 0.00 0.00 36.68 2.69
2716 7322 6.265577 CAATACAGTTATTTGCACCTTAGGC 58.734 40.000 0.00 0.00 0.00 3.93
2717 7323 2.747446 ACAGTTATTTGCACCTTAGGCG 59.253 45.455 0.00 0.00 0.00 5.52
2718 7324 2.097466 CAGTTATTTGCACCTTAGGCGG 59.903 50.000 0.00 0.00 0.00 6.13
2719 7325 1.404035 GTTATTTGCACCTTAGGCGGG 59.596 52.381 0.00 0.00 0.00 6.13
2720 7326 0.750182 TATTTGCACCTTAGGCGGGC 60.750 55.000 0.00 0.18 0.00 6.13
2721 7327 4.733542 TTGCACCTTAGGCGGGCC 62.734 66.667 0.18 0.18 0.00 5.80
2735 7341 3.480133 GGCCTGGCCCATCTACGT 61.480 66.667 27.77 0.00 44.06 3.57
2736 7342 2.590092 GCCTGGCCCATCTACGTT 59.410 61.111 7.66 0.00 0.00 3.99
2737 7343 1.523938 GCCTGGCCCATCTACGTTC 60.524 63.158 7.66 0.00 0.00 3.95
2738 7344 1.972660 GCCTGGCCCATCTACGTTCT 61.973 60.000 7.66 0.00 0.00 3.01
2739 7345 0.541863 CCTGGCCCATCTACGTTCTT 59.458 55.000 0.00 0.00 0.00 2.52
2740 7346 1.065418 CCTGGCCCATCTACGTTCTTT 60.065 52.381 0.00 0.00 0.00 2.52
2741 7347 2.618045 CCTGGCCCATCTACGTTCTTTT 60.618 50.000 0.00 0.00 0.00 2.27
2742 7348 3.081804 CTGGCCCATCTACGTTCTTTTT 58.918 45.455 0.00 0.00 0.00 1.94
2743 7349 3.078837 TGGCCCATCTACGTTCTTTTTC 58.921 45.455 0.00 0.00 0.00 2.29
2744 7350 3.244770 TGGCCCATCTACGTTCTTTTTCT 60.245 43.478 0.00 0.00 0.00 2.52
2745 7351 3.756963 GGCCCATCTACGTTCTTTTTCTT 59.243 43.478 0.00 0.00 0.00 2.52
2746 7352 4.217767 GGCCCATCTACGTTCTTTTTCTTT 59.782 41.667 0.00 0.00 0.00 2.52
2747 7353 5.391449 GCCCATCTACGTTCTTTTTCTTTC 58.609 41.667 0.00 0.00 0.00 2.62
2748 7354 5.181433 GCCCATCTACGTTCTTTTTCTTTCT 59.819 40.000 0.00 0.00 0.00 2.52
2749 7355 6.294010 GCCCATCTACGTTCTTTTTCTTTCTT 60.294 38.462 0.00 0.00 0.00 2.52
2750 7356 7.649057 CCCATCTACGTTCTTTTTCTTTCTTT 58.351 34.615 0.00 0.00 0.00 2.52
2751 7357 8.135529 CCCATCTACGTTCTTTTTCTTTCTTTT 58.864 33.333 0.00 0.00 0.00 2.27
2780 7386 9.535878 TTAAACTTCAAAAAGAACAAGTTGTGT 57.464 25.926 9.79 0.00 38.72 3.72
2791 7397 4.817318 ACAAGTTGTGTTTTGTGGGATT 57.183 36.364 7.96 0.00 37.01 3.01
2792 7398 5.159273 ACAAGTTGTGTTTTGTGGGATTT 57.841 34.783 7.96 0.00 37.01 2.17
2793 7399 4.934602 ACAAGTTGTGTTTTGTGGGATTTG 59.065 37.500 7.96 0.00 37.01 2.32
2794 7400 5.174395 CAAGTTGTGTTTTGTGGGATTTGA 58.826 37.500 0.00 0.00 0.00 2.69
2795 7401 5.413309 AGTTGTGTTTTGTGGGATTTGAA 57.587 34.783 0.00 0.00 0.00 2.69
2796 7402 5.175127 AGTTGTGTTTTGTGGGATTTGAAC 58.825 37.500 0.00 0.00 0.00 3.18
2797 7403 4.130286 TGTGTTTTGTGGGATTTGAACC 57.870 40.909 0.00 0.00 0.00 3.62
2798 7404 3.118592 TGTGTTTTGTGGGATTTGAACCC 60.119 43.478 0.00 0.00 46.87 4.11
2807 7413 2.760650 GGGATTTGAACCCAGAACATCC 59.239 50.000 0.00 0.00 46.05 3.51
2808 7414 3.430453 GGATTTGAACCCAGAACATCCA 58.570 45.455 0.00 0.00 0.00 3.41
2809 7415 3.193479 GGATTTGAACCCAGAACATCCAC 59.807 47.826 0.00 0.00 0.00 4.02
2810 7416 3.593442 TTTGAACCCAGAACATCCACT 57.407 42.857 0.00 0.00 0.00 4.00
2811 7417 3.593442 TTGAACCCAGAACATCCACTT 57.407 42.857 0.00 0.00 0.00 3.16
2812 7418 4.715534 TTGAACCCAGAACATCCACTTA 57.284 40.909 0.00 0.00 0.00 2.24
2813 7419 4.715534 TGAACCCAGAACATCCACTTAA 57.284 40.909 0.00 0.00 0.00 1.85
2814 7420 5.055265 TGAACCCAGAACATCCACTTAAA 57.945 39.130 0.00 0.00 0.00 1.52
2815 7421 5.070001 TGAACCCAGAACATCCACTTAAAG 58.930 41.667 0.00 0.00 0.00 1.85
2816 7422 4.724279 ACCCAGAACATCCACTTAAAGT 57.276 40.909 0.00 0.00 0.00 2.66
2817 7423 5.836024 ACCCAGAACATCCACTTAAAGTA 57.164 39.130 0.00 0.00 0.00 2.24
2818 7424 5.805728 ACCCAGAACATCCACTTAAAGTAG 58.194 41.667 0.00 0.00 0.00 2.57
2819 7425 4.636206 CCCAGAACATCCACTTAAAGTAGC 59.364 45.833 0.00 0.00 0.00 3.58
2820 7426 4.330074 CCAGAACATCCACTTAAAGTAGCG 59.670 45.833 0.00 0.00 0.00 4.26
2821 7427 5.168569 CAGAACATCCACTTAAAGTAGCGA 58.831 41.667 0.00 0.00 0.00 4.93
2822 7428 5.637810 CAGAACATCCACTTAAAGTAGCGAA 59.362 40.000 0.00 0.00 0.00 4.70
2823 7429 5.869888 AGAACATCCACTTAAAGTAGCGAAG 59.130 40.000 0.00 0.00 0.00 3.79
2824 7430 5.401531 ACATCCACTTAAAGTAGCGAAGA 57.598 39.130 0.00 0.00 0.00 2.87
2825 7431 5.169295 ACATCCACTTAAAGTAGCGAAGAC 58.831 41.667 0.00 0.00 0.00 3.01
2826 7432 3.829948 TCCACTTAAAGTAGCGAAGACG 58.170 45.455 0.00 0.00 42.93 4.18
2838 7444 1.068474 CGAAGACGCTAAACACAGGG 58.932 55.000 0.00 0.00 34.78 4.45
2839 7445 1.336517 CGAAGACGCTAAACACAGGGA 60.337 52.381 0.00 0.00 33.01 4.20
2840 7446 2.674177 CGAAGACGCTAAACACAGGGAT 60.674 50.000 0.00 0.00 33.01 3.85
2841 7447 3.428452 CGAAGACGCTAAACACAGGGATA 60.428 47.826 0.00 0.00 33.01 2.59
2842 7448 3.802948 AGACGCTAAACACAGGGATAG 57.197 47.619 0.00 0.00 33.01 2.08
2843 7449 3.097614 AGACGCTAAACACAGGGATAGT 58.902 45.455 0.00 0.00 33.01 2.12
2844 7450 3.514309 AGACGCTAAACACAGGGATAGTT 59.486 43.478 0.00 0.00 33.01 2.24
2845 7451 4.020485 AGACGCTAAACACAGGGATAGTTT 60.020 41.667 0.00 0.00 38.79 2.66
2846 7452 5.186409 AGACGCTAAACACAGGGATAGTTTA 59.814 40.000 0.00 0.00 36.85 2.01
2847 7453 5.797051 ACGCTAAACACAGGGATAGTTTAA 58.203 37.500 0.00 0.00 37.30 1.52
2848 7454 5.640783 ACGCTAAACACAGGGATAGTTTAAC 59.359 40.000 0.00 0.00 37.30 2.01
2849 7455 5.873164 CGCTAAACACAGGGATAGTTTAACT 59.127 40.000 2.32 2.32 37.30 2.24
2850 7456 6.183360 CGCTAAACACAGGGATAGTTTAACTG 60.183 42.308 8.00 0.00 37.30 3.16
2851 7457 6.653740 GCTAAACACAGGGATAGTTTAACTGT 59.346 38.462 8.00 0.04 42.62 3.55
2852 7458 7.174426 GCTAAACACAGGGATAGTTTAACTGTT 59.826 37.037 8.00 0.00 40.14 3.16
2853 7459 6.877611 AACACAGGGATAGTTTAACTGTTG 57.122 37.500 8.00 0.00 40.14 3.33
2854 7460 5.937111 ACACAGGGATAGTTTAACTGTTGT 58.063 37.500 8.00 0.09 40.14 3.32
2855 7461 7.069877 ACACAGGGATAGTTTAACTGTTGTA 57.930 36.000 8.00 0.00 40.14 2.41
2856 7462 7.686434 ACACAGGGATAGTTTAACTGTTGTAT 58.314 34.615 8.00 0.00 40.14 2.29
2857 7463 7.822822 ACACAGGGATAGTTTAACTGTTGTATC 59.177 37.037 8.00 2.32 40.14 2.24
2858 7464 7.822334 CACAGGGATAGTTTAACTGTTGTATCA 59.178 37.037 8.00 0.00 40.14 2.15
2859 7465 7.822822 ACAGGGATAGTTTAACTGTTGTATCAC 59.177 37.037 8.00 3.57 39.16 3.06
2860 7466 7.822334 CAGGGATAGTTTAACTGTTGTATCACA 59.178 37.037 8.00 0.00 0.00 3.58
2861 7467 8.380099 AGGGATAGTTTAACTGTTGTATCACAA 58.620 33.333 8.00 0.00 35.42 3.33
2862 7468 9.005777 GGGATAGTTTAACTGTTGTATCACAAA 57.994 33.333 8.00 0.00 40.15 2.83
2867 7473 9.783256 AGTTTAACTGTTGTATCACAAAACTTC 57.217 29.630 2.69 0.00 40.15 3.01
2868 7474 9.783256 GTTTAACTGTTGTATCACAAAACTTCT 57.217 29.630 2.69 0.00 40.15 2.85
2871 7477 8.911247 AACTGTTGTATCACAAAACTTCTTTC 57.089 30.769 0.00 0.00 40.15 2.62
2872 7478 7.480810 ACTGTTGTATCACAAAACTTCTTTCC 58.519 34.615 0.00 0.00 40.15 3.13
2873 7479 7.339466 ACTGTTGTATCACAAAACTTCTTTCCT 59.661 33.333 0.00 0.00 40.15 3.36
2874 7480 8.062065 TGTTGTATCACAAAACTTCTTTCCTT 57.938 30.769 0.00 0.00 40.15 3.36
2875 7481 8.188139 TGTTGTATCACAAAACTTCTTTCCTTC 58.812 33.333 0.00 0.00 40.15 3.46
2876 7482 8.406297 GTTGTATCACAAAACTTCTTTCCTTCT 58.594 33.333 0.00 0.00 40.15 2.85
2877 7483 8.154649 TGTATCACAAAACTTCTTTCCTTCTC 57.845 34.615 0.00 0.00 0.00 2.87
2878 7484 6.641169 ATCACAAAACTTCTTTCCTTCTCC 57.359 37.500 0.00 0.00 0.00 3.71
2879 7485 5.755849 TCACAAAACTTCTTTCCTTCTCCT 58.244 37.500 0.00 0.00 0.00 3.69
2880 7486 6.187682 TCACAAAACTTCTTTCCTTCTCCTT 58.812 36.000 0.00 0.00 0.00 3.36
2881 7487 7.343357 TCACAAAACTTCTTTCCTTCTCCTTA 58.657 34.615 0.00 0.00 0.00 2.69
2882 7488 7.998964 TCACAAAACTTCTTTCCTTCTCCTTAT 59.001 33.333 0.00 0.00 0.00 1.73
2883 7489 8.293157 CACAAAACTTCTTTCCTTCTCCTTATC 58.707 37.037 0.00 0.00 0.00 1.75
2884 7490 7.173390 ACAAAACTTCTTTCCTTCTCCTTATCG 59.827 37.037 0.00 0.00 0.00 2.92
2885 7491 6.607004 AACTTCTTTCCTTCTCCTTATCGA 57.393 37.500 0.00 0.00 0.00 3.59
2886 7492 6.607004 ACTTCTTTCCTTCTCCTTATCGAA 57.393 37.500 0.00 0.00 0.00 3.71
2887 7493 7.005709 ACTTCTTTCCTTCTCCTTATCGAAA 57.994 36.000 0.00 0.00 0.00 3.46
2888 7494 7.625469 ACTTCTTTCCTTCTCCTTATCGAAAT 58.375 34.615 0.00 0.00 0.00 2.17
2889 7495 8.759782 ACTTCTTTCCTTCTCCTTATCGAAATA 58.240 33.333 0.00 0.00 0.00 1.40
2890 7496 9.771534 CTTCTTTCCTTCTCCTTATCGAAATAT 57.228 33.333 0.00 0.00 0.00 1.28
2927 7533 4.519191 AAAAGCATGCGTTTTCAGTTTG 57.481 36.364 23.38 0.00 0.00 2.93
2928 7534 2.138596 AGCATGCGTTTTCAGTTTGG 57.861 45.000 13.01 0.00 0.00 3.28
2929 7535 0.508213 GCATGCGTTTTCAGTTTGGC 59.492 50.000 0.00 0.00 0.00 4.52
2930 7536 1.139163 CATGCGTTTTCAGTTTGGCC 58.861 50.000 0.00 0.00 0.00 5.36
2931 7537 0.318614 ATGCGTTTTCAGTTTGGCCG 60.319 50.000 0.00 0.00 0.00 6.13
2932 7538 1.065109 GCGTTTTCAGTTTGGCCGT 59.935 52.632 0.00 0.00 0.00 5.68
2933 7539 0.526739 GCGTTTTCAGTTTGGCCGTT 60.527 50.000 0.00 0.00 0.00 4.44
2934 7540 1.915952 CGTTTTCAGTTTGGCCGTTT 58.084 45.000 0.00 0.00 0.00 3.60
2935 7541 2.263945 CGTTTTCAGTTTGGCCGTTTT 58.736 42.857 0.00 0.00 0.00 2.43
2936 7542 2.280445 CGTTTTCAGTTTGGCCGTTTTC 59.720 45.455 0.00 0.00 0.00 2.29
2937 7543 3.517602 GTTTTCAGTTTGGCCGTTTTCT 58.482 40.909 0.00 0.00 0.00 2.52
2938 7544 3.878160 TTTCAGTTTGGCCGTTTTCTT 57.122 38.095 0.00 0.00 0.00 2.52
2939 7545 3.878160 TTCAGTTTGGCCGTTTTCTTT 57.122 38.095 0.00 0.00 0.00 2.52
2940 7546 3.157932 TCAGTTTGGCCGTTTTCTTTG 57.842 42.857 0.00 0.00 0.00 2.77
2941 7547 2.159170 TCAGTTTGGCCGTTTTCTTTGG 60.159 45.455 0.00 0.00 0.00 3.28
2942 7548 2.104170 AGTTTGGCCGTTTTCTTTGGA 58.896 42.857 0.00 0.00 0.00 3.53
2943 7549 2.498078 AGTTTGGCCGTTTTCTTTGGAA 59.502 40.909 0.00 0.00 0.00 3.53
2944 7550 3.133901 AGTTTGGCCGTTTTCTTTGGAAT 59.866 39.130 0.00 0.00 0.00 3.01
2945 7551 3.828875 TTGGCCGTTTTCTTTGGAATT 57.171 38.095 0.00 0.00 0.00 2.17
2946 7552 3.828875 TGGCCGTTTTCTTTGGAATTT 57.171 38.095 0.00 0.00 0.00 1.82
2947 7553 4.143986 TGGCCGTTTTCTTTGGAATTTT 57.856 36.364 0.00 0.00 0.00 1.82
2948 7554 4.518249 TGGCCGTTTTCTTTGGAATTTTT 58.482 34.783 0.00 0.00 0.00 1.94
2949 7555 4.572795 TGGCCGTTTTCTTTGGAATTTTTC 59.427 37.500 0.00 0.00 0.00 2.29
2993 7599 9.818796 TTTGTTTTGTTTTCTTAATTTGCAGAC 57.181 25.926 0.00 0.00 0.00 3.51
2994 7600 7.969314 TGTTTTGTTTTCTTAATTTGCAGACC 58.031 30.769 0.00 0.00 0.00 3.85
2995 7601 7.821846 TGTTTTGTTTTCTTAATTTGCAGACCT 59.178 29.630 0.00 0.00 0.00 3.85
2996 7602 8.664798 GTTTTGTTTTCTTAATTTGCAGACCTT 58.335 29.630 0.00 0.00 0.00 3.50
2997 7603 8.785329 TTTGTTTTCTTAATTTGCAGACCTTT 57.215 26.923 0.00 0.00 0.00 3.11
2998 7604 8.785329 TTGTTTTCTTAATTTGCAGACCTTTT 57.215 26.923 0.00 0.00 0.00 2.27
2999 7605 8.785329 TGTTTTCTTAATTTGCAGACCTTTTT 57.215 26.923 0.00 0.00 0.00 1.94
3000 7606 9.877178 TGTTTTCTTAATTTGCAGACCTTTTTA 57.123 25.926 0.00 0.00 0.00 1.52
3013 7619 9.660180 TGCAGACCTTTTTAAATTTTGTTAACT 57.340 25.926 7.22 0.00 0.00 2.24
3060 7666 9.757227 TTTTTAATGAACTTTTCCTACCACATG 57.243 29.630 0.00 0.00 0.00 3.21
3061 7667 8.698973 TTTAATGAACTTTTCCTACCACATGA 57.301 30.769 0.00 0.00 0.00 3.07
3062 7668 6.575162 AATGAACTTTTCCTACCACATGAC 57.425 37.500 0.00 0.00 0.00 3.06
3063 7669 4.394729 TGAACTTTTCCTACCACATGACC 58.605 43.478 0.00 0.00 0.00 4.02
3064 7670 4.104102 TGAACTTTTCCTACCACATGACCT 59.896 41.667 0.00 0.00 0.00 3.85
3065 7671 4.724279 ACTTTTCCTACCACATGACCTT 57.276 40.909 0.00 0.00 0.00 3.50
3066 7672 5.061721 ACTTTTCCTACCACATGACCTTT 57.938 39.130 0.00 0.00 0.00 3.11
3067 7673 5.454966 ACTTTTCCTACCACATGACCTTTT 58.545 37.500 0.00 0.00 0.00 2.27
3068 7674 5.897250 ACTTTTCCTACCACATGACCTTTTT 59.103 36.000 0.00 0.00 0.00 1.94
3069 7675 6.040504 ACTTTTCCTACCACATGACCTTTTTC 59.959 38.462 0.00 0.00 0.00 2.29
3070 7676 4.715534 TCCTACCACATGACCTTTTTCA 57.284 40.909 0.00 0.00 0.00 2.69
3071 7677 5.055265 TCCTACCACATGACCTTTTTCAA 57.945 39.130 0.00 0.00 0.00 2.69
3072 7678 5.450453 TCCTACCACATGACCTTTTTCAAA 58.550 37.500 0.00 0.00 0.00 2.69
3073 7679 6.074648 TCCTACCACATGACCTTTTTCAAAT 58.925 36.000 0.00 0.00 0.00 2.32
3074 7680 6.553100 TCCTACCACATGACCTTTTTCAAATT 59.447 34.615 0.00 0.00 0.00 1.82
3075 7681 6.868339 CCTACCACATGACCTTTTTCAAATTC 59.132 38.462 0.00 0.00 0.00 2.17
3076 7682 6.232581 ACCACATGACCTTTTTCAAATTCA 57.767 33.333 0.00 0.00 0.00 2.57
3077 7683 6.829849 ACCACATGACCTTTTTCAAATTCAT 58.170 32.000 0.00 0.00 0.00 2.57
3078 7684 6.707161 ACCACATGACCTTTTTCAAATTCATG 59.293 34.615 0.00 14.06 43.86 3.07
3079 7685 6.930164 CCACATGACCTTTTTCAAATTCATGA 59.070 34.615 18.79 0.00 41.85 3.07
3080 7686 7.604927 CCACATGACCTTTTTCAAATTCATGAT 59.395 33.333 18.79 8.00 41.85 2.45
3081 7687 8.995220 CACATGACCTTTTTCAAATTCATGATT 58.005 29.630 18.79 0.00 41.85 2.57
3082 7688 9.563748 ACATGACCTTTTTCAAATTCATGATTT 57.436 25.926 18.79 0.00 41.85 2.17
3113 7719 9.918630 AGTCTCCAATTTTATTTCAAGTTCATG 57.081 29.630 0.00 0.00 0.00 3.07
3114 7720 9.912634 GTCTCCAATTTTATTTCAAGTTCATGA 57.087 29.630 0.00 0.00 0.00 3.07
3128 7734 4.574599 GTTCATGAACTGTTTTGAGCCT 57.425 40.909 27.66 0.00 38.25 4.58
3129 7735 4.293415 GTTCATGAACTGTTTTGAGCCTG 58.707 43.478 27.66 0.00 38.25 4.85
3130 7736 2.294233 TCATGAACTGTTTTGAGCCTGC 59.706 45.455 0.00 0.00 0.00 4.85
3131 7737 0.662619 TGAACTGTTTTGAGCCTGCG 59.337 50.000 0.00 0.00 0.00 5.18
3132 7738 0.944386 GAACTGTTTTGAGCCTGCGA 59.056 50.000 0.00 0.00 0.00 5.10
3133 7739 1.537202 GAACTGTTTTGAGCCTGCGAT 59.463 47.619 0.00 0.00 0.00 4.58
3134 7740 1.609208 ACTGTTTTGAGCCTGCGATT 58.391 45.000 0.00 0.00 0.00 3.34
3135 7741 1.956477 ACTGTTTTGAGCCTGCGATTT 59.044 42.857 0.00 0.00 0.00 2.17
3136 7742 2.362077 ACTGTTTTGAGCCTGCGATTTT 59.638 40.909 0.00 0.00 0.00 1.82
3137 7743 3.568007 ACTGTTTTGAGCCTGCGATTTTA 59.432 39.130 0.00 0.00 0.00 1.52
3138 7744 4.218417 ACTGTTTTGAGCCTGCGATTTTAT 59.782 37.500 0.00 0.00 0.00 1.40
3139 7745 5.132897 TGTTTTGAGCCTGCGATTTTATT 57.867 34.783 0.00 0.00 0.00 1.40
3140 7746 5.537188 TGTTTTGAGCCTGCGATTTTATTT 58.463 33.333 0.00 0.00 0.00 1.40
3141 7747 5.988561 TGTTTTGAGCCTGCGATTTTATTTT 59.011 32.000 0.00 0.00 0.00 1.82
3142 7748 7.148641 TGTTTTGAGCCTGCGATTTTATTTTA 58.851 30.769 0.00 0.00 0.00 1.52
3143 7749 7.653713 TGTTTTGAGCCTGCGATTTTATTTTAA 59.346 29.630 0.00 0.00 0.00 1.52
3144 7750 8.491950 GTTTTGAGCCTGCGATTTTATTTTAAA 58.508 29.630 0.00 0.00 0.00 1.52
3145 7751 8.770438 TTTGAGCCTGCGATTTTATTTTAAAT 57.230 26.923 0.00 0.00 0.00 1.40
3146 7752 8.770438 TTGAGCCTGCGATTTTATTTTAAATT 57.230 26.923 0.00 0.00 0.00 1.82
3147 7753 8.770438 TGAGCCTGCGATTTTATTTTAAATTT 57.230 26.923 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
134 136 0.969409 GCTGGGATTGCTCTTGGCTT 60.969 55.000 0.00 0.00 42.39 4.35
194 196 4.452455 GTGGACACATTCAGACGAGATTTT 59.548 41.667 0.00 0.00 0.00 1.82
195 197 3.997021 GTGGACACATTCAGACGAGATTT 59.003 43.478 0.00 0.00 0.00 2.17
196 198 3.589988 GTGGACACATTCAGACGAGATT 58.410 45.455 0.00 0.00 0.00 2.40
197 199 2.416027 CGTGGACACATTCAGACGAGAT 60.416 50.000 3.12 0.00 34.87 2.75
241 1588 5.959618 AGGAAAACAAATAGTTCTTCCCG 57.040 39.130 13.34 0.00 40.26 5.14
509 2048 3.423154 GCTGTGCACCTACGTGGC 61.423 66.667 15.69 3.65 40.61 5.01
524 2063 4.742201 AGCATGGTTCGTCGCGCT 62.742 61.111 5.56 0.00 0.00 5.92
540 2083 5.919141 CCTCAAATTGAGCTTGAAACAAGAG 59.081 40.000 17.03 0.00 42.98 2.85
550 2093 5.531659 CAGATATGAGCCTCAAATTGAGCTT 59.468 40.000 17.03 7.26 42.98 3.74
551 2094 5.064558 CAGATATGAGCCTCAAATTGAGCT 58.935 41.667 17.03 16.41 42.98 4.09
659 2240 7.639162 GCTATATTATAGCTTGACGTGTGTT 57.361 36.000 22.83 0.00 37.56 3.32
767 3713 1.269448 CCGTTATGGTGCAACTTGCTT 59.731 47.619 14.78 0.79 45.31 3.91
769 3715 0.732538 GCCGTTATGGTGCAACTTGC 60.733 55.000 2.04 6.82 40.55 4.01
987 5127 4.778213 AGAGACCATGGCTTATTGCTAA 57.222 40.909 13.04 0.00 42.39 3.09
994 5136 3.362706 ACGAAGTAGAGACCATGGCTTA 58.637 45.455 13.04 3.40 41.94 3.09
1167 5309 3.890936 GAAGTGCAGCCGGAGCAGT 62.891 63.158 20.52 20.31 46.96 4.40
1216 5358 4.214545 CCGGCGATCAGGATAGAGTATATC 59.785 50.000 9.30 0.00 0.00 1.63
1222 5364 1.214062 GCCGGCGATCAGGATAGAG 59.786 63.158 12.58 0.00 0.00 2.43
1223 5365 1.530655 TGCCGGCGATCAGGATAGA 60.531 57.895 23.90 0.00 0.00 1.98
1224 5366 1.373497 GTGCCGGCGATCAGGATAG 60.373 63.158 23.90 0.00 0.00 2.08
1286 5470 2.453521 AGTGAAGCATGCATGGTCAAT 58.546 42.857 30.01 23.29 37.57 2.57
1340 5525 1.067635 GCGTTTTGTTCCATGCCAGAT 60.068 47.619 0.00 0.00 0.00 2.90
1421 5606 0.321919 TCTGCTTGCACATGGTCTCC 60.322 55.000 0.00 0.00 0.00 3.71
1540 5725 3.974719 TCCATGGTTAGCAAATTAGCCA 58.025 40.909 12.58 0.00 38.14 4.75
1565 6110 2.620115 CAGCTGCACCAGAAGAGAAAAA 59.380 45.455 0.00 0.00 32.44 1.94
1566 6111 2.224606 CAGCTGCACCAGAAGAGAAAA 58.775 47.619 0.00 0.00 32.44 2.29
1567 6112 1.544093 CCAGCTGCACCAGAAGAGAAA 60.544 52.381 8.66 0.00 32.44 2.52
1573 6126 2.752358 CTCCCAGCTGCACCAGAA 59.248 61.111 8.66 0.00 32.44 3.02
1584 6139 4.101448 CCACGAAGGCCCTCCCAG 62.101 72.222 0.00 0.00 35.39 4.45
1760 6323 2.438254 CACTGCGCCTGCCCAATA 60.438 61.111 4.18 0.00 41.78 1.90
1979 6554 2.203015 CCGGTGCCCGTGAATAGG 60.203 66.667 11.85 0.00 46.80 2.57
2196 6775 4.320023 TGGTCAAAGAAAGCGCTATAACA 58.680 39.130 12.05 0.00 0.00 2.41
2197 6776 4.939509 TGGTCAAAGAAAGCGCTATAAC 57.060 40.909 12.05 2.32 0.00 1.89
2281 6883 0.542467 TTGCACCACATGGCCTTCAT 60.542 50.000 3.32 0.00 39.32 2.57
2282 6884 0.542467 ATTGCACCACATGGCCTTCA 60.542 50.000 3.32 0.00 39.32 3.02
2316 6918 3.751479 ATCACAAAAAGGGAAGTTGCC 57.249 42.857 5.03 5.03 29.94 4.52
2389 6991 9.250624 CAATGTAGTGAGTATTACTAGGCTTTC 57.749 37.037 0.00 0.00 31.72 2.62
2434 7040 6.756542 ACTTTGACTACAAATTTGACCAAAGC 59.243 34.615 30.36 16.56 43.64 3.51
2460 7066 7.362381 AGGGCCCTCTTATATTTTGGATAAT 57.638 36.000 22.28 0.00 0.00 1.28
2462 7068 6.796867 AAGGGCCCTCTTATATTTTGGATA 57.203 37.500 28.84 0.00 0.00 2.59
2464 7070 5.481615 AAAGGGCCCTCTTATATTTTGGA 57.518 39.130 28.84 0.00 0.00 3.53
2473 7079 5.321927 CAAGAAGTTTAAAGGGCCCTCTTA 58.678 41.667 28.84 21.62 0.00 2.10
2492 7098 2.034687 GCCTGGAGCAAGCCAAGA 59.965 61.111 0.00 0.00 42.97 3.02
2501 7107 2.034687 TTCTTGGCTGCCTGGAGC 59.965 61.111 21.03 1.57 44.14 4.70
2502 7108 1.378250 CCTTCTTGGCTGCCTGGAG 60.378 63.158 21.03 15.62 0.00 3.86
2503 7109 2.129555 GACCTTCTTGGCTGCCTGGA 62.130 60.000 21.03 14.42 40.22 3.86
2504 7110 1.676967 GACCTTCTTGGCTGCCTGG 60.677 63.158 21.03 15.21 40.22 4.45
2505 7111 2.037136 CGACCTTCTTGGCTGCCTG 61.037 63.158 21.03 12.70 40.22 4.85
2506 7112 2.177594 CTCGACCTTCTTGGCTGCCT 62.178 60.000 21.03 0.00 40.22 4.75
2507 7113 1.743252 CTCGACCTTCTTGGCTGCC 60.743 63.158 12.87 12.87 40.22 4.85
2508 7114 1.743252 CCTCGACCTTCTTGGCTGC 60.743 63.158 0.00 0.00 40.22 5.25
2509 7115 0.321671 TTCCTCGACCTTCTTGGCTG 59.678 55.000 0.00 0.00 40.22 4.85
2510 7116 0.610687 CTTCCTCGACCTTCTTGGCT 59.389 55.000 0.00 0.00 40.22 4.75
2511 7117 0.321996 ACTTCCTCGACCTTCTTGGC 59.678 55.000 0.00 0.00 40.22 4.52
2512 7118 1.066787 GGACTTCCTCGACCTTCTTGG 60.067 57.143 0.00 0.00 42.93 3.61
2513 7119 1.402984 CGGACTTCCTCGACCTTCTTG 60.403 57.143 0.00 0.00 0.00 3.02
2514 7120 0.889306 CGGACTTCCTCGACCTTCTT 59.111 55.000 0.00 0.00 0.00 2.52
2515 7121 0.251253 ACGGACTTCCTCGACCTTCT 60.251 55.000 0.00 0.00 0.00 2.85
2516 7122 0.109226 CACGGACTTCCTCGACCTTC 60.109 60.000 0.00 0.00 0.00 3.46
2517 7123 1.965219 CACGGACTTCCTCGACCTT 59.035 57.895 0.00 0.00 0.00 3.50
2518 7124 2.637383 GCACGGACTTCCTCGACCT 61.637 63.158 0.00 0.00 0.00 3.85
2519 7125 2.126031 GCACGGACTTCCTCGACC 60.126 66.667 0.00 0.00 0.00 4.79
2520 7126 2.126031 GGCACGGACTTCCTCGAC 60.126 66.667 0.00 0.00 0.00 4.20
2521 7127 2.599281 TGGCACGGACTTCCTCGA 60.599 61.111 0.00 0.00 0.00 4.04
2522 7128 2.432628 GTGGCACGGACTTCCTCG 60.433 66.667 0.00 0.00 0.00 4.63
2523 7129 1.079750 GAGTGGCACGGACTTCCTC 60.080 63.158 12.71 0.00 0.00 3.71
2524 7130 2.584391 GGAGTGGCACGGACTTCCT 61.584 63.158 12.71 0.00 0.00 3.36
2525 7131 2.047179 GGAGTGGCACGGACTTCC 60.047 66.667 12.71 9.56 0.00 3.46
2526 7132 1.079750 GAGGAGTGGCACGGACTTC 60.080 63.158 12.71 9.95 0.00 3.01
2527 7133 2.584391 GGAGGAGTGGCACGGACTT 61.584 63.158 12.71 4.47 0.00 3.01
2528 7134 2.997897 GGAGGAGTGGCACGGACT 60.998 66.667 12.71 11.54 0.00 3.85
2529 7135 3.302347 CTGGAGGAGTGGCACGGAC 62.302 68.421 12.71 6.57 0.00 4.79
2530 7136 2.997315 CTGGAGGAGTGGCACGGA 60.997 66.667 12.71 0.00 0.00 4.69
2531 7137 4.767255 GCTGGAGGAGTGGCACGG 62.767 72.222 12.71 0.00 0.00 4.94
2532 7138 3.655810 GAGCTGGAGGAGTGGCACG 62.656 68.421 12.71 0.00 0.00 5.34
2533 7139 2.267324 GAGCTGGAGGAGTGGCAC 59.733 66.667 10.29 10.29 0.00 5.01
2534 7140 3.005539 GGAGCTGGAGGAGTGGCA 61.006 66.667 0.00 0.00 0.00 4.92
2535 7141 3.005539 TGGAGCTGGAGGAGTGGC 61.006 66.667 0.00 0.00 0.00 5.01
2536 7142 1.197430 AAGTGGAGCTGGAGGAGTGG 61.197 60.000 0.00 0.00 0.00 4.00
2537 7143 0.248843 GAAGTGGAGCTGGAGGAGTG 59.751 60.000 0.00 0.00 0.00 3.51
2538 7144 0.116143 AGAAGTGGAGCTGGAGGAGT 59.884 55.000 0.00 0.00 0.00 3.85
2539 7145 0.536260 CAGAAGTGGAGCTGGAGGAG 59.464 60.000 0.00 0.00 0.00 3.69
2540 7146 0.178921 ACAGAAGTGGAGCTGGAGGA 60.179 55.000 0.00 0.00 36.47 3.71
2541 7147 0.036577 CACAGAAGTGGAGCTGGAGG 60.037 60.000 0.00 0.00 42.13 4.30
2542 7148 3.529252 CACAGAAGTGGAGCTGGAG 57.471 57.895 0.00 0.00 42.13 3.86
2552 7158 3.266510 TCAGTGCTTGAACACAGAAGT 57.733 42.857 0.00 0.00 43.23 3.01
2553 7159 4.142622 TGTTTCAGTGCTTGAACACAGAAG 60.143 41.667 4.08 0.00 45.22 2.85
2554 7160 3.755905 TGTTTCAGTGCTTGAACACAGAA 59.244 39.130 4.08 0.00 45.22 3.02
2555 7161 3.126858 GTGTTTCAGTGCTTGAACACAGA 59.873 43.478 18.34 0.00 45.22 3.41
2556 7162 3.127548 AGTGTTTCAGTGCTTGAACACAG 59.872 43.478 22.03 0.00 45.22 3.66
2557 7163 3.081061 AGTGTTTCAGTGCTTGAACACA 58.919 40.909 22.03 17.34 45.22 3.72
2558 7164 3.764885 AGTGTTTCAGTGCTTGAACAC 57.235 42.857 16.79 16.79 45.22 3.32
2559 7165 3.312421 GCTAGTGTTTCAGTGCTTGAACA 59.688 43.478 4.08 4.16 45.22 3.18
2560 7166 3.312421 TGCTAGTGTTTCAGTGCTTGAAC 59.688 43.478 4.08 2.13 45.22 3.18
2561 7167 3.540617 TGCTAGTGTTTCAGTGCTTGAA 58.459 40.909 0.87 0.87 43.92 2.69
2562 7168 3.192541 TGCTAGTGTTTCAGTGCTTGA 57.807 42.857 0.00 0.00 0.00 3.02
2563 7169 3.750130 AGATGCTAGTGTTTCAGTGCTTG 59.250 43.478 0.00 0.00 0.00 4.01
2564 7170 3.750130 CAGATGCTAGTGTTTCAGTGCTT 59.250 43.478 0.00 0.00 0.00 3.91
2565 7171 3.244353 ACAGATGCTAGTGTTTCAGTGCT 60.244 43.478 0.00 0.00 0.00 4.40
2566 7172 3.070018 ACAGATGCTAGTGTTTCAGTGC 58.930 45.455 0.00 0.00 0.00 4.40
2567 7173 4.060900 ACACAGATGCTAGTGTTTCAGTG 58.939 43.478 0.00 0.00 46.04 3.66
2568 7174 4.342862 ACACAGATGCTAGTGTTTCAGT 57.657 40.909 0.00 0.00 46.04 3.41
2575 7181 6.823689 ACCCTTTATAAACACAGATGCTAGTG 59.176 38.462 0.00 0.00 41.40 2.74
2576 7182 6.958767 ACCCTTTATAAACACAGATGCTAGT 58.041 36.000 0.00 0.00 0.00 2.57
2577 7183 8.204836 ACTACCCTTTATAAACACAGATGCTAG 58.795 37.037 0.00 0.00 0.00 3.42
2578 7184 8.086143 ACTACCCTTTATAAACACAGATGCTA 57.914 34.615 0.00 0.00 0.00 3.49
2579 7185 6.958767 ACTACCCTTTATAAACACAGATGCT 58.041 36.000 0.00 0.00 0.00 3.79
2580 7186 8.774586 CATACTACCCTTTATAAACACAGATGC 58.225 37.037 0.00 0.00 0.00 3.91
2581 7187 9.273016 CCATACTACCCTTTATAAACACAGATG 57.727 37.037 0.00 0.00 0.00 2.90
2582 7188 9.220906 TCCATACTACCCTTTATAAACACAGAT 57.779 33.333 0.00 0.00 0.00 2.90
2583 7189 8.480501 GTCCATACTACCCTTTATAAACACAGA 58.519 37.037 0.00 0.00 0.00 3.41
2584 7190 7.713942 GGTCCATACTACCCTTTATAAACACAG 59.286 40.741 0.00 0.00 0.00 3.66
2585 7191 7.403813 AGGTCCATACTACCCTTTATAAACACA 59.596 37.037 0.00 0.00 37.77 3.72
2586 7192 7.799081 AGGTCCATACTACCCTTTATAAACAC 58.201 38.462 0.00 0.00 37.77 3.32
2587 7193 8.396619 AAGGTCCATACTACCCTTTATAAACA 57.603 34.615 0.00 0.00 37.77 2.83
2588 7194 9.117183 CAAAGGTCCATACTACCCTTTATAAAC 57.883 37.037 0.00 0.00 43.61 2.01
2589 7195 7.776500 GCAAAGGTCCATACTACCCTTTATAAA 59.224 37.037 0.00 0.00 43.61 1.40
2590 7196 7.092354 TGCAAAGGTCCATACTACCCTTTATAA 60.092 37.037 0.00 0.00 43.61 0.98
2591 7197 6.387513 TGCAAAGGTCCATACTACCCTTTATA 59.612 38.462 0.00 0.00 43.61 0.98
2592 7198 5.192923 TGCAAAGGTCCATACTACCCTTTAT 59.807 40.000 0.00 0.00 43.61 1.40
2593 7199 4.536888 TGCAAAGGTCCATACTACCCTTTA 59.463 41.667 0.00 0.00 43.61 1.85
2594 7200 3.332485 TGCAAAGGTCCATACTACCCTTT 59.668 43.478 0.00 0.00 45.72 3.11
2595 7201 2.916934 TGCAAAGGTCCATACTACCCTT 59.083 45.455 0.00 0.00 38.94 3.95
2596 7202 2.557869 TGCAAAGGTCCATACTACCCT 58.442 47.619 0.00 0.00 37.77 4.34
2597 7203 3.577805 ATGCAAAGGTCCATACTACCC 57.422 47.619 0.00 0.00 37.77 3.69
2598 7204 4.929808 CGATATGCAAAGGTCCATACTACC 59.070 45.833 0.00 0.00 37.27 3.18
2599 7205 5.539048 ACGATATGCAAAGGTCCATACTAC 58.461 41.667 0.00 0.00 0.00 2.73
2600 7206 5.801531 ACGATATGCAAAGGTCCATACTA 57.198 39.130 0.00 0.00 0.00 1.82
2601 7207 4.689612 ACGATATGCAAAGGTCCATACT 57.310 40.909 0.00 0.00 0.00 2.12
2602 7208 5.176958 GTGTACGATATGCAAAGGTCCATAC 59.823 44.000 0.00 0.00 0.00 2.39
2603 7209 5.163395 TGTGTACGATATGCAAAGGTCCATA 60.163 40.000 0.00 0.00 0.00 2.74
2604 7210 4.127171 GTGTACGATATGCAAAGGTCCAT 58.873 43.478 0.00 0.00 0.00 3.41
2605 7211 3.055747 TGTGTACGATATGCAAAGGTCCA 60.056 43.478 0.00 0.00 0.00 4.02
2606 7212 3.527533 TGTGTACGATATGCAAAGGTCC 58.472 45.455 0.00 0.00 0.00 4.46
2607 7213 4.181578 ACTGTGTACGATATGCAAAGGTC 58.818 43.478 0.00 0.00 32.64 3.85
2608 7214 4.202245 ACTGTGTACGATATGCAAAGGT 57.798 40.909 0.00 0.00 32.64 3.50
2609 7215 5.545658 AAACTGTGTACGATATGCAAAGG 57.454 39.130 0.00 0.00 32.64 3.11
2610 7216 9.632969 GTATAAAACTGTGTACGATATGCAAAG 57.367 33.333 0.00 0.00 34.50 2.77
2611 7217 8.322428 CGTATAAAACTGTGTACGATATGCAAA 58.678 33.333 0.00 0.00 41.62 3.68
2612 7218 7.488792 ACGTATAAAACTGTGTACGATATGCAA 59.511 33.333 16.59 0.00 41.62 4.08
2613 7219 6.974048 ACGTATAAAACTGTGTACGATATGCA 59.026 34.615 16.59 0.00 41.62 3.96
2614 7220 7.385668 ACGTATAAAACTGTGTACGATATGC 57.614 36.000 16.59 0.00 41.62 3.14
2619 7225 9.437045 CATACATACGTATAAAACTGTGTACGA 57.563 33.333 7.96 0.00 41.62 3.43
2620 7226 8.684655 CCATACATACGTATAAAACTGTGTACG 58.315 37.037 7.96 11.25 43.86 3.67
2621 7227 9.520204 ACCATACATACGTATAAAACTGTGTAC 57.480 33.333 7.96 0.00 36.11 2.90
2622 7228 9.518906 CACCATACATACGTATAAAACTGTGTA 57.481 33.333 7.96 5.85 36.11 2.90
2623 7229 8.252417 TCACCATACATACGTATAAAACTGTGT 58.748 33.333 7.96 3.62 36.11 3.72
2624 7230 8.637281 TCACCATACATACGTATAAAACTGTG 57.363 34.615 7.96 11.29 36.11 3.66
2625 7231 9.826574 ATTCACCATACATACGTATAAAACTGT 57.173 29.630 7.96 5.13 36.11 3.55
2655 7261 1.470979 GCGGCAGTATATACCCATCGG 60.471 57.143 9.32 2.81 0.00 4.18
2656 7262 1.203758 TGCGGCAGTATATACCCATCG 59.796 52.381 9.32 9.50 0.00 3.84
2657 7263 3.198068 CATGCGGCAGTATATACCCATC 58.802 50.000 9.25 1.11 0.00 3.51
2658 7264 2.571653 ACATGCGGCAGTATATACCCAT 59.428 45.455 9.25 2.82 0.00 4.00
2659 7265 1.974957 ACATGCGGCAGTATATACCCA 59.025 47.619 9.25 0.67 0.00 4.51
2660 7266 2.762535 ACATGCGGCAGTATATACCC 57.237 50.000 9.25 3.91 0.00 3.69
2661 7267 3.617263 GCTAACATGCGGCAGTATATACC 59.383 47.826 9.25 0.00 0.00 2.73
2662 7268 3.617263 GGCTAACATGCGGCAGTATATAC 59.383 47.826 9.25 4.60 0.00 1.47
2663 7269 3.513912 AGGCTAACATGCGGCAGTATATA 59.486 43.478 9.25 0.00 0.00 0.86
2664 7270 2.303022 AGGCTAACATGCGGCAGTATAT 59.697 45.455 9.25 0.00 0.00 0.86
2665 7271 1.691976 AGGCTAACATGCGGCAGTATA 59.308 47.619 9.25 0.14 0.00 1.47
2666 7272 0.469917 AGGCTAACATGCGGCAGTAT 59.530 50.000 9.25 0.00 0.00 2.12
2667 7273 1.116308 TAGGCTAACATGCGGCAGTA 58.884 50.000 9.25 0.00 0.00 2.74
2668 7274 0.462047 GTAGGCTAACATGCGGCAGT 60.462 55.000 9.25 4.02 0.00 4.40
2669 7275 1.490693 CGTAGGCTAACATGCGGCAG 61.491 60.000 9.25 3.35 0.00 4.85
2670 7276 1.520564 CGTAGGCTAACATGCGGCA 60.521 57.895 4.58 4.58 0.00 5.69
2671 7277 2.882366 GCGTAGGCTAACATGCGGC 61.882 63.158 0.00 0.00 35.83 6.53
2672 7278 2.585869 CGCGTAGGCTAACATGCGG 61.586 63.158 18.23 5.72 41.69 5.69
2673 7279 2.920869 CGCGTAGGCTAACATGCG 59.079 61.111 14.34 14.34 39.57 4.73
2674 7280 2.626455 GCGCGTAGGCTAACATGC 59.374 61.111 8.43 0.00 36.88 4.06
2675 7281 1.087202 TTGGCGCGTAGGCTAACATG 61.087 55.000 8.43 0.00 46.88 3.21
2676 7282 0.179056 ATTGGCGCGTAGGCTAACAT 60.179 50.000 8.43 0.00 46.88 2.71
2677 7283 0.460722 TATTGGCGCGTAGGCTAACA 59.539 50.000 8.43 0.00 46.88 2.41
2678 7284 0.857287 GTATTGGCGCGTAGGCTAAC 59.143 55.000 8.43 0.00 46.88 2.34
2679 7285 0.460722 TGTATTGGCGCGTAGGCTAA 59.539 50.000 8.43 0.00 46.88 3.09
2680 7286 0.031585 CTGTATTGGCGCGTAGGCTA 59.968 55.000 8.43 0.00 46.88 3.93
2681 7287 1.227263 CTGTATTGGCGCGTAGGCT 60.227 57.895 8.43 0.00 46.88 4.58
2682 7288 1.087771 AACTGTATTGGCGCGTAGGC 61.088 55.000 8.43 0.00 46.95 3.93
2683 7289 2.212869 TAACTGTATTGGCGCGTAGG 57.787 50.000 8.43 0.00 0.00 3.18
2684 7290 4.514506 CAAATAACTGTATTGGCGCGTAG 58.485 43.478 8.43 0.00 30.04 3.51
2685 7291 3.242478 GCAAATAACTGTATTGGCGCGTA 60.242 43.478 8.43 0.00 37.00 4.42
2686 7292 2.477189 GCAAATAACTGTATTGGCGCGT 60.477 45.455 8.43 0.00 37.00 6.01
2687 7293 2.108700 GCAAATAACTGTATTGGCGCG 58.891 47.619 0.00 0.00 37.00 6.86
2688 7294 2.851824 GTGCAAATAACTGTATTGGCGC 59.148 45.455 0.00 0.00 46.07 6.53
2689 7295 3.128589 AGGTGCAAATAACTGTATTGGCG 59.871 43.478 0.00 0.00 46.07 5.69
2690 7296 4.718940 AGGTGCAAATAACTGTATTGGC 57.281 40.909 0.00 0.00 44.17 4.52
2691 7297 6.680378 GCCTAAGGTGCAAATAACTGTATTGG 60.680 42.308 0.00 0.00 30.04 3.16
2692 7298 6.265577 GCCTAAGGTGCAAATAACTGTATTG 58.734 40.000 0.00 0.00 30.04 1.90
2693 7299 5.065988 CGCCTAAGGTGCAAATAACTGTATT 59.934 40.000 0.00 0.00 0.00 1.89
2694 7300 4.574828 CGCCTAAGGTGCAAATAACTGTAT 59.425 41.667 0.00 0.00 0.00 2.29
2695 7301 3.936453 CGCCTAAGGTGCAAATAACTGTA 59.064 43.478 0.00 0.00 0.00 2.74
2696 7302 2.747446 CGCCTAAGGTGCAAATAACTGT 59.253 45.455 0.00 0.00 0.00 3.55
2697 7303 2.097466 CCGCCTAAGGTGCAAATAACTG 59.903 50.000 0.00 0.00 0.00 3.16
2698 7304 2.365582 CCGCCTAAGGTGCAAATAACT 58.634 47.619 0.00 0.00 0.00 2.24
2699 7305 1.404035 CCCGCCTAAGGTGCAAATAAC 59.596 52.381 0.00 0.00 0.00 1.89
2700 7306 1.757682 CCCGCCTAAGGTGCAAATAA 58.242 50.000 0.00 0.00 0.00 1.40
2701 7307 0.750182 GCCCGCCTAAGGTGCAAATA 60.750 55.000 0.00 0.00 0.00 1.40
2702 7308 2.052104 GCCCGCCTAAGGTGCAAAT 61.052 57.895 0.00 0.00 0.00 2.32
2703 7309 2.675075 GCCCGCCTAAGGTGCAAA 60.675 61.111 0.00 0.00 0.00 3.68
2704 7310 4.733542 GGCCCGCCTAAGGTGCAA 62.734 66.667 0.00 0.00 31.78 4.08
2707 7313 4.489771 CCAGGCCCGCCTAAGGTG 62.490 72.222 8.18 0.00 46.28 4.00
2719 7325 1.523938 GAACGTAGATGGGCCAGGC 60.524 63.158 13.78 1.26 0.00 4.85
2720 7326 0.541863 AAGAACGTAGATGGGCCAGG 59.458 55.000 13.78 0.85 0.00 4.45
2721 7327 2.403252 AAAGAACGTAGATGGGCCAG 57.597 50.000 13.78 0.00 0.00 4.85
2722 7328 2.871096 AAAAGAACGTAGATGGGCCA 57.129 45.000 9.61 9.61 0.00 5.36
2723 7329 3.344515 AGAAAAAGAACGTAGATGGGCC 58.655 45.455 0.00 0.00 0.00 5.80
2724 7330 5.181433 AGAAAGAAAAAGAACGTAGATGGGC 59.819 40.000 0.00 0.00 0.00 5.36
2725 7331 6.803154 AGAAAGAAAAAGAACGTAGATGGG 57.197 37.500 0.00 0.00 0.00 4.00
2754 7360 9.535878 ACACAACTTGTTCTTTTTGAAGTTTAA 57.464 25.926 0.00 0.00 36.69 1.52
2755 7361 9.535878 AACACAACTTGTTCTTTTTGAAGTTTA 57.464 25.926 0.00 0.00 46.05 2.01
2756 7362 8.432110 AACACAACTTGTTCTTTTTGAAGTTT 57.568 26.923 0.00 0.00 46.05 2.66
2770 7376 4.817318 AATCCCACAAAACACAACTTGT 57.183 36.364 0.00 0.00 41.74 3.16
2771 7377 5.174395 TCAAATCCCACAAAACACAACTTG 58.826 37.500 0.00 0.00 0.00 3.16
2772 7378 5.413309 TCAAATCCCACAAAACACAACTT 57.587 34.783 0.00 0.00 0.00 2.66
2773 7379 5.175127 GTTCAAATCCCACAAAACACAACT 58.825 37.500 0.00 0.00 0.00 3.16
2774 7380 4.331443 GGTTCAAATCCCACAAAACACAAC 59.669 41.667 0.00 0.00 0.00 3.32
2775 7381 4.508662 GGTTCAAATCCCACAAAACACAA 58.491 39.130 0.00 0.00 0.00 3.33
2776 7382 3.118592 GGGTTCAAATCCCACAAAACACA 60.119 43.478 0.00 0.00 44.05 3.72
2777 7383 3.462982 GGGTTCAAATCCCACAAAACAC 58.537 45.455 0.00 0.00 44.05 3.32
2778 7384 3.828875 GGGTTCAAATCCCACAAAACA 57.171 42.857 0.00 0.00 44.05 2.83
2786 7392 2.760650 GGATGTTCTGGGTTCAAATCCC 59.239 50.000 0.00 0.00 44.81 3.85
2787 7393 3.193479 GTGGATGTTCTGGGTTCAAATCC 59.807 47.826 0.00 0.00 34.06 3.01
2788 7394 4.082125 AGTGGATGTTCTGGGTTCAAATC 58.918 43.478 0.00 0.00 0.00 2.17
2789 7395 4.118168 AGTGGATGTTCTGGGTTCAAAT 57.882 40.909 0.00 0.00 0.00 2.32
2790 7396 3.593442 AGTGGATGTTCTGGGTTCAAA 57.407 42.857 0.00 0.00 0.00 2.69
2791 7397 3.593442 AAGTGGATGTTCTGGGTTCAA 57.407 42.857 0.00 0.00 0.00 2.69
2792 7398 4.715534 TTAAGTGGATGTTCTGGGTTCA 57.284 40.909 0.00 0.00 0.00 3.18
2793 7399 5.070685 ACTTTAAGTGGATGTTCTGGGTTC 58.929 41.667 0.00 0.00 0.00 3.62
2794 7400 5.061721 ACTTTAAGTGGATGTTCTGGGTT 57.938 39.130 0.00 0.00 0.00 4.11
2795 7401 4.724279 ACTTTAAGTGGATGTTCTGGGT 57.276 40.909 0.00 0.00 0.00 4.51
2796 7402 4.636206 GCTACTTTAAGTGGATGTTCTGGG 59.364 45.833 12.62 0.00 0.00 4.45
2797 7403 4.330074 CGCTACTTTAAGTGGATGTTCTGG 59.670 45.833 12.62 0.00 0.00 3.86
2798 7404 5.168569 TCGCTACTTTAAGTGGATGTTCTG 58.831 41.667 12.62 0.00 0.00 3.02
2799 7405 5.401531 TCGCTACTTTAAGTGGATGTTCT 57.598 39.130 12.62 0.00 0.00 3.01
2800 7406 5.867716 TCTTCGCTACTTTAAGTGGATGTTC 59.132 40.000 12.62 0.00 0.00 3.18
2801 7407 5.638234 GTCTTCGCTACTTTAAGTGGATGTT 59.362 40.000 12.62 0.00 0.00 2.71
2802 7408 5.169295 GTCTTCGCTACTTTAAGTGGATGT 58.831 41.667 12.62 0.00 0.00 3.06
2803 7409 4.265556 CGTCTTCGCTACTTTAAGTGGATG 59.734 45.833 12.62 4.02 0.00 3.51
2804 7410 4.421948 CGTCTTCGCTACTTTAAGTGGAT 58.578 43.478 12.62 0.00 0.00 3.41
2805 7411 3.829948 CGTCTTCGCTACTTTAAGTGGA 58.170 45.455 12.62 2.36 0.00 4.02
2819 7425 1.068474 CCCTGTGTTTAGCGTCTTCG 58.932 55.000 0.00 0.00 40.37 3.79
2820 7426 2.450609 TCCCTGTGTTTAGCGTCTTC 57.549 50.000 0.00 0.00 0.00 2.87
2821 7427 3.514309 ACTATCCCTGTGTTTAGCGTCTT 59.486 43.478 0.00 0.00 0.00 3.01
2822 7428 3.097614 ACTATCCCTGTGTTTAGCGTCT 58.902 45.455 0.00 0.00 0.00 4.18
2823 7429 3.521947 ACTATCCCTGTGTTTAGCGTC 57.478 47.619 0.00 0.00 0.00 5.19
2824 7430 3.975168 AACTATCCCTGTGTTTAGCGT 57.025 42.857 0.00 0.00 0.00 5.07
2825 7431 5.873164 AGTTAAACTATCCCTGTGTTTAGCG 59.127 40.000 0.00 0.00 40.08 4.26
2826 7432 6.653740 ACAGTTAAACTATCCCTGTGTTTAGC 59.346 38.462 0.00 0.00 37.43 3.09
2827 7433 8.504005 CAACAGTTAAACTATCCCTGTGTTTAG 58.496 37.037 0.00 0.00 37.43 1.85
2828 7434 7.994334 ACAACAGTTAAACTATCCCTGTGTTTA 59.006 33.333 0.00 0.00 36.55 2.01
2829 7435 6.831868 ACAACAGTTAAACTATCCCTGTGTTT 59.168 34.615 0.00 0.00 36.55 2.83
2830 7436 6.362248 ACAACAGTTAAACTATCCCTGTGTT 58.638 36.000 0.00 0.00 36.55 3.32
2831 7437 5.937111 ACAACAGTTAAACTATCCCTGTGT 58.063 37.500 0.00 0.00 36.55 3.72
2832 7438 7.822334 TGATACAACAGTTAAACTATCCCTGTG 59.178 37.037 0.00 0.00 36.55 3.66
2833 7439 7.822822 GTGATACAACAGTTAAACTATCCCTGT 59.177 37.037 0.00 0.00 37.96 4.00
2834 7440 7.822334 TGTGATACAACAGTTAAACTATCCCTG 59.178 37.037 0.00 0.00 0.00 4.45
2835 7441 7.913789 TGTGATACAACAGTTAAACTATCCCT 58.086 34.615 0.00 0.00 0.00 4.20
2836 7442 8.556213 TTGTGATACAACAGTTAAACTATCCC 57.444 34.615 0.00 0.00 32.34 3.85
2841 7447 9.783256 GAAGTTTTGTGATACAACAGTTAAACT 57.217 29.630 0.00 0.00 37.90 2.66
2842 7448 9.783256 AGAAGTTTTGTGATACAACAGTTAAAC 57.217 29.630 2.06 0.00 37.90 2.01
2845 7451 9.997482 GAAAGAAGTTTTGTGATACAACAGTTA 57.003 29.630 2.06 0.00 37.90 2.24
2846 7452 7.973944 GGAAAGAAGTTTTGTGATACAACAGTT 59.026 33.333 1.74 1.74 37.90 3.16
2847 7453 7.339466 AGGAAAGAAGTTTTGTGATACAACAGT 59.661 33.333 0.00 0.00 37.90 3.55
2848 7454 7.707104 AGGAAAGAAGTTTTGTGATACAACAG 58.293 34.615 0.00 0.00 37.90 3.16
2849 7455 7.639113 AGGAAAGAAGTTTTGTGATACAACA 57.361 32.000 0.00 0.00 37.90 3.33
2850 7456 8.406297 AGAAGGAAAGAAGTTTTGTGATACAAC 58.594 33.333 0.00 0.00 37.90 3.32
2851 7457 8.519799 AGAAGGAAAGAAGTTTTGTGATACAA 57.480 30.769 0.00 0.00 36.11 2.41
2852 7458 7.228706 GGAGAAGGAAAGAAGTTTTGTGATACA 59.771 37.037 0.00 0.00 0.00 2.29
2853 7459 7.445707 AGGAGAAGGAAAGAAGTTTTGTGATAC 59.554 37.037 0.00 0.00 0.00 2.24
2854 7460 7.518188 AGGAGAAGGAAAGAAGTTTTGTGATA 58.482 34.615 0.00 0.00 0.00 2.15
2855 7461 6.368805 AGGAGAAGGAAAGAAGTTTTGTGAT 58.631 36.000 0.00 0.00 0.00 3.06
2856 7462 5.755849 AGGAGAAGGAAAGAAGTTTTGTGA 58.244 37.500 0.00 0.00 0.00 3.58
2857 7463 6.456795 AAGGAGAAGGAAAGAAGTTTTGTG 57.543 37.500 0.00 0.00 0.00 3.33
2858 7464 7.173390 CGATAAGGAGAAGGAAAGAAGTTTTGT 59.827 37.037 0.00 0.00 0.00 2.83
2859 7465 7.387948 TCGATAAGGAGAAGGAAAGAAGTTTTG 59.612 37.037 0.00 0.00 0.00 2.44
2860 7466 7.450903 TCGATAAGGAGAAGGAAAGAAGTTTT 58.549 34.615 0.00 0.00 0.00 2.43
2861 7467 7.005709 TCGATAAGGAGAAGGAAAGAAGTTT 57.994 36.000 0.00 0.00 0.00 2.66
2862 7468 6.607004 TCGATAAGGAGAAGGAAAGAAGTT 57.393 37.500 0.00 0.00 0.00 2.66
2863 7469 6.607004 TTCGATAAGGAGAAGGAAAGAAGT 57.393 37.500 0.00 0.00 0.00 3.01
2864 7470 9.771534 ATATTTCGATAAGGAGAAGGAAAGAAG 57.228 33.333 0.00 0.00 0.00 2.85
2905 7511 4.201802 CCAAACTGAAAACGCATGCTTTTT 60.202 37.500 28.67 28.67 31.53 1.94
2906 7512 3.309410 CCAAACTGAAAACGCATGCTTTT 59.691 39.130 15.77 15.77 0.00 2.27
2907 7513 2.865551 CCAAACTGAAAACGCATGCTTT 59.134 40.909 17.13 10.28 0.00 3.51
2908 7514 2.472816 CCAAACTGAAAACGCATGCTT 58.527 42.857 17.13 2.67 0.00 3.91
2909 7515 1.869342 GCCAAACTGAAAACGCATGCT 60.869 47.619 17.13 0.00 0.00 3.79
2910 7516 0.508213 GCCAAACTGAAAACGCATGC 59.492 50.000 7.91 7.91 0.00 4.06
2911 7517 1.139163 GGCCAAACTGAAAACGCATG 58.861 50.000 0.00 0.00 0.00 4.06
2912 7518 0.318614 CGGCCAAACTGAAAACGCAT 60.319 50.000 2.24 0.00 0.00 4.73
2913 7519 1.064946 CGGCCAAACTGAAAACGCA 59.935 52.632 2.24 0.00 0.00 5.24
2914 7520 0.526739 AACGGCCAAACTGAAAACGC 60.527 50.000 2.24 0.00 0.00 4.84
2915 7521 1.915952 AAACGGCCAAACTGAAAACG 58.084 45.000 2.24 0.00 0.00 3.60
2916 7522 3.517602 AGAAAACGGCCAAACTGAAAAC 58.482 40.909 2.24 0.00 0.00 2.43
2917 7523 3.878160 AGAAAACGGCCAAACTGAAAA 57.122 38.095 2.24 0.00 0.00 2.29
2918 7524 3.878160 AAGAAAACGGCCAAACTGAAA 57.122 38.095 2.24 0.00 0.00 2.69
2919 7525 3.516615 CAAAGAAAACGGCCAAACTGAA 58.483 40.909 2.24 0.00 0.00 3.02
2920 7526 2.159170 CCAAAGAAAACGGCCAAACTGA 60.159 45.455 2.24 0.00 0.00 3.41
2921 7527 2.159170 TCCAAAGAAAACGGCCAAACTG 60.159 45.455 2.24 0.00 0.00 3.16
2922 7528 2.104170 TCCAAAGAAAACGGCCAAACT 58.896 42.857 2.24 0.00 0.00 2.66
2923 7529 2.588027 TCCAAAGAAAACGGCCAAAC 57.412 45.000 2.24 0.00 0.00 2.93
2924 7530 3.828875 ATTCCAAAGAAAACGGCCAAA 57.171 38.095 2.24 0.00 35.09 3.28
2925 7531 3.828875 AATTCCAAAGAAAACGGCCAA 57.171 38.095 2.24 0.00 35.09 4.52
2926 7532 3.828875 AAATTCCAAAGAAAACGGCCA 57.171 38.095 2.24 0.00 35.09 5.36
2927 7533 5.090652 GAAAAATTCCAAAGAAAACGGCC 57.909 39.130 0.00 0.00 35.09 6.13
2967 7573 9.818796 GTCTGCAAATTAAGAAAACAAAACAAA 57.181 25.926 0.00 0.00 0.00 2.83
2968 7574 8.447053 GGTCTGCAAATTAAGAAAACAAAACAA 58.553 29.630 0.00 0.00 0.00 2.83
2969 7575 7.821846 AGGTCTGCAAATTAAGAAAACAAAACA 59.178 29.630 0.00 0.00 0.00 2.83
2970 7576 8.196802 AGGTCTGCAAATTAAGAAAACAAAAC 57.803 30.769 0.00 0.00 0.00 2.43
2971 7577 8.785329 AAGGTCTGCAAATTAAGAAAACAAAA 57.215 26.923 0.00 0.00 0.00 2.44
2972 7578 8.785329 AAAGGTCTGCAAATTAAGAAAACAAA 57.215 26.923 0.00 0.00 0.00 2.83
2973 7579 8.785329 AAAAGGTCTGCAAATTAAGAAAACAA 57.215 26.923 0.00 0.00 0.00 2.83
2974 7580 8.785329 AAAAAGGTCTGCAAATTAAGAAAACA 57.215 26.923 0.00 0.00 0.00 2.83
2987 7593 9.660180 AGTTAACAAAATTTAAAAAGGTCTGCA 57.340 25.926 8.61 0.00 0.00 4.41
3034 7640 9.757227 CATGTGGTAGGAAAAGTTCATTAAAAA 57.243 29.630 0.00 0.00 0.00 1.94
3035 7641 9.137459 TCATGTGGTAGGAAAAGTTCATTAAAA 57.863 29.630 0.00 0.00 0.00 1.52
3036 7642 8.573035 GTCATGTGGTAGGAAAAGTTCATTAAA 58.427 33.333 0.00 0.00 0.00 1.52
3037 7643 7.175990 GGTCATGTGGTAGGAAAAGTTCATTAA 59.824 37.037 0.00 0.00 0.00 1.40
3038 7644 6.657541 GGTCATGTGGTAGGAAAAGTTCATTA 59.342 38.462 0.00 0.00 0.00 1.90
3039 7645 5.476945 GGTCATGTGGTAGGAAAAGTTCATT 59.523 40.000 0.00 0.00 0.00 2.57
3040 7646 5.010282 GGTCATGTGGTAGGAAAAGTTCAT 58.990 41.667 0.00 0.00 0.00 2.57
3041 7647 4.104102 AGGTCATGTGGTAGGAAAAGTTCA 59.896 41.667 0.00 0.00 0.00 3.18
3042 7648 4.652822 AGGTCATGTGGTAGGAAAAGTTC 58.347 43.478 0.00 0.00 0.00 3.01
3043 7649 4.724279 AGGTCATGTGGTAGGAAAAGTT 57.276 40.909 0.00 0.00 0.00 2.66
3044 7650 4.724279 AAGGTCATGTGGTAGGAAAAGT 57.276 40.909 0.00 0.00 0.00 2.66
3045 7651 6.040391 TGAAAAAGGTCATGTGGTAGGAAAAG 59.960 38.462 0.00 0.00 0.00 2.27
3046 7652 5.894393 TGAAAAAGGTCATGTGGTAGGAAAA 59.106 36.000 0.00 0.00 0.00 2.29
3047 7653 5.450453 TGAAAAAGGTCATGTGGTAGGAAA 58.550 37.500 0.00 0.00 0.00 3.13
3048 7654 5.055265 TGAAAAAGGTCATGTGGTAGGAA 57.945 39.130 0.00 0.00 0.00 3.36
3049 7655 4.715534 TGAAAAAGGTCATGTGGTAGGA 57.284 40.909 0.00 0.00 0.00 2.94
3050 7656 5.782893 TTTGAAAAAGGTCATGTGGTAGG 57.217 39.130 0.00 0.00 0.00 3.18
3051 7657 7.432869 TGAATTTGAAAAAGGTCATGTGGTAG 58.567 34.615 0.00 0.00 0.00 3.18
3052 7658 7.353414 TGAATTTGAAAAAGGTCATGTGGTA 57.647 32.000 0.00 0.00 0.00 3.25
3053 7659 6.232581 TGAATTTGAAAAAGGTCATGTGGT 57.767 33.333 0.00 0.00 0.00 4.16
3054 7660 6.930164 TCATGAATTTGAAAAAGGTCATGTGG 59.070 34.615 18.84 4.99 41.85 4.17
3055 7661 7.949903 TCATGAATTTGAAAAAGGTCATGTG 57.050 32.000 18.84 6.40 41.85 3.21
3056 7662 9.563748 AAATCATGAATTTGAAAAAGGTCATGT 57.436 25.926 18.84 10.46 41.85 3.21
3087 7693 9.918630 CATGAACTTGAAATAAAATTGGAGACT 57.081 29.630 0.00 0.00 0.00 3.24
3088 7694 9.912634 TCATGAACTTGAAATAAAATTGGAGAC 57.087 29.630 0.00 0.00 0.00 3.36
3107 7713 4.293415 CAGGCTCAAAACAGTTCATGAAC 58.707 43.478 27.69 27.69 41.45 3.18
3108 7714 3.243501 GCAGGCTCAAAACAGTTCATGAA 60.244 43.478 3.38 3.38 0.00 2.57
3109 7715 2.294233 GCAGGCTCAAAACAGTTCATGA 59.706 45.455 0.00 0.00 0.00 3.07
3110 7716 2.669364 GCAGGCTCAAAACAGTTCATG 58.331 47.619 0.00 0.00 0.00 3.07
3111 7717 1.267806 CGCAGGCTCAAAACAGTTCAT 59.732 47.619 0.00 0.00 0.00 2.57
3112 7718 0.662619 CGCAGGCTCAAAACAGTTCA 59.337 50.000 0.00 0.00 0.00 3.18
3113 7719 0.944386 TCGCAGGCTCAAAACAGTTC 59.056 50.000 0.00 0.00 0.00 3.01
3114 7720 1.609208 ATCGCAGGCTCAAAACAGTT 58.391 45.000 0.00 0.00 0.00 3.16
3115 7721 1.609208 AATCGCAGGCTCAAAACAGT 58.391 45.000 0.00 0.00 0.00 3.55
3116 7722 2.712057 AAATCGCAGGCTCAAAACAG 57.288 45.000 0.00 0.00 0.00 3.16
3117 7723 4.782019 ATAAAATCGCAGGCTCAAAACA 57.218 36.364 0.00 0.00 0.00 2.83
3118 7724 6.466308 AAAATAAAATCGCAGGCTCAAAAC 57.534 33.333 0.00 0.00 0.00 2.43
3119 7725 8.594881 TTTAAAATAAAATCGCAGGCTCAAAA 57.405 26.923 0.00 0.00 0.00 2.44
3120 7726 8.770438 ATTTAAAATAAAATCGCAGGCTCAAA 57.230 26.923 0.00 0.00 0.00 2.69
3121 7727 8.770438 AATTTAAAATAAAATCGCAGGCTCAA 57.230 26.923 0.00 0.00 0.00 3.02
3122 7728 8.770438 AAATTTAAAATAAAATCGCAGGCTCA 57.230 26.923 0.00 0.00 0.00 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.