Multiple sequence alignment - TraesCS2B01G123000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G123000 chr2B 100.000 2963 0 0 1 2963 90443159 90440197 0.000000e+00 5472.0
1 TraesCS2B01G123000 chr2B 94.595 37 2 0 847 883 303102303 303102339 1.150000e-04 58.4
2 TraesCS2B01G123000 chr2B 100.000 30 0 0 852 881 19618463 19618434 4.130000e-04 56.5
3 TraesCS2B01G123000 chr2D 89.008 1674 103 37 917 2549 57147741 57146108 0.000000e+00 1997.0
4 TraesCS2B01G123000 chr2D 75.630 714 131 24 1217 1911 23159970 23159281 6.160000e-82 315.0
5 TraesCS2B01G123000 chr2D 93.333 180 11 1 2784 2963 57146082 57145904 6.300000e-67 265.0
6 TraesCS2B01G123000 chr2D 78.221 326 64 5 1581 1903 606198377 606198698 5.010000e-48 202.0
7 TraesCS2B01G123000 chr2A 88.406 1587 104 34 877 2402 58386454 58384887 0.000000e+00 1838.0
8 TraesCS2B01G123000 chr2A 88.325 197 19 4 2488 2681 58384728 58384533 1.780000e-57 233.0
9 TraesCS2B01G123000 chr6A 77.738 557 81 22 1380 1911 578685830 578686368 4.800000e-78 302.0
10 TraesCS2B01G123000 chr6A 100.000 28 0 0 852 879 416378109 416378082 5.000000e-03 52.8
11 TraesCS2B01G123000 chr5D 78.552 373 49 17 1521 1890 558941790 558941446 1.790000e-52 217.0
12 TraesCS2B01G123000 chr5D 77.711 332 66 5 1575 1903 26423784 26423458 2.330000e-46 196.0
13 TraesCS2B01G123000 chr3B 85.149 202 26 2 1694 1892 57228571 57228371 1.390000e-48 204.0
14 TraesCS2B01G123000 chr3B 83.333 210 27 6 1688 1892 187530404 187530610 1.400000e-43 187.0
15 TraesCS2B01G123000 chr3B 100.000 30 0 0 850 879 758724584 758724613 4.130000e-04 56.5
16 TraesCS2B01G123000 chr7B 75.591 381 61 13 1430 1798 584233982 584234342 3.060000e-35 159.0
17 TraesCS2B01G123000 chr7B 88.462 52 3 2 831 882 120456082 120456130 3.190000e-05 60.2
18 TraesCS2B01G123000 chr5B 75.591 381 61 13 1430 1798 623106489 623106129 3.060000e-35 159.0
19 TraesCS2B01G123000 chr4D 75.714 280 56 8 1217 1494 488262416 488262147 2.400000e-26 130.0
20 TraesCS2B01G123000 chr7A 83.212 137 21 1 743 879 166791429 166791563 1.120000e-24 124.0
21 TraesCS2B01G123000 chr5A 89.362 47 3 1 837 883 392030541 392030585 1.150000e-04 58.4
22 TraesCS2B01G123000 chr5A 100.000 28 0 0 852 879 644013477 644013504 5.000000e-03 52.8
23 TraesCS2B01G123000 chr3A 92.105 38 1 2 852 887 107038295 107038258 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G123000 chr2B 90440197 90443159 2962 True 5472.0 5472 100.0000 1 2963 1 chr2B.!!$R2 2962
1 TraesCS2B01G123000 chr2D 57145904 57147741 1837 True 1131.0 1997 91.1705 917 2963 2 chr2D.!!$R2 2046
2 TraesCS2B01G123000 chr2D 23159281 23159970 689 True 315.0 315 75.6300 1217 1911 1 chr2D.!!$R1 694
3 TraesCS2B01G123000 chr2A 58384533 58386454 1921 True 1035.5 1838 88.3655 877 2681 2 chr2A.!!$R1 1804
4 TraesCS2B01G123000 chr6A 578685830 578686368 538 False 302.0 302 77.7380 1380 1911 1 chr6A.!!$F1 531

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
847 848 0.027063 AACGGACAAAAGCGAACGTG 59.973 50.0 0.0 0.0 34.54 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2702 2904 0.027194 CGCGAGATGCTGTGGATTTG 59.973 55.0 0.0 0.0 43.27 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.902086 GTCGGGCTCGGGCTAGAC 61.902 72.222 17.04 17.04 37.53 2.59
38 39 4.208686 GGGCTCGGGCTAGACGTG 62.209 72.222 7.48 0.00 38.73 4.49
39 40 4.208686 GGCTCGGGCTAGACGTGG 62.209 72.222 7.48 0.00 38.73 4.94
40 41 4.208686 GCTCGGGCTAGACGTGGG 62.209 72.222 0.00 0.00 35.22 4.61
41 42 3.528370 CTCGGGCTAGACGTGGGG 61.528 72.222 0.00 0.00 0.00 4.96
44 45 3.712907 GGGCTAGACGTGGGGCAA 61.713 66.667 0.00 0.00 0.00 4.52
45 46 2.125106 GGCTAGACGTGGGGCAAG 60.125 66.667 0.00 0.00 0.00 4.01
46 47 2.125106 GCTAGACGTGGGGCAAGG 60.125 66.667 0.00 0.00 0.00 3.61
47 48 2.125106 CTAGACGTGGGGCAAGGC 60.125 66.667 0.00 0.00 0.00 4.35
48 49 2.925706 TAGACGTGGGGCAAGGCA 60.926 61.111 0.00 0.00 0.00 4.75
49 50 2.859273 CTAGACGTGGGGCAAGGCAG 62.859 65.000 0.00 0.00 0.00 4.85
50 51 4.329545 GACGTGGGGCAAGGCAGA 62.330 66.667 0.00 0.00 0.00 4.26
51 52 4.335647 ACGTGGGGCAAGGCAGAG 62.336 66.667 0.00 0.00 0.00 3.35
149 150 3.591835 GCGAGGCGGAGGAGAGAG 61.592 72.222 0.00 0.00 0.00 3.20
150 151 2.904866 CGAGGCGGAGGAGAGAGG 60.905 72.222 0.00 0.00 0.00 3.69
151 152 2.277404 GAGGCGGAGGAGAGAGGT 59.723 66.667 0.00 0.00 0.00 3.85
152 153 2.043450 AGGCGGAGGAGAGAGGTG 60.043 66.667 0.00 0.00 0.00 4.00
153 154 2.043852 GGCGGAGGAGAGAGGTGA 60.044 66.667 0.00 0.00 0.00 4.02
154 155 2.124693 GGCGGAGGAGAGAGGTGAG 61.125 68.421 0.00 0.00 0.00 3.51
155 156 2.781158 GCGGAGGAGAGAGGTGAGC 61.781 68.421 0.00 0.00 0.00 4.26
156 157 2.477176 CGGAGGAGAGAGGTGAGCG 61.477 68.421 0.00 0.00 0.00 5.03
157 158 2.124693 GGAGGAGAGAGGTGAGCGG 61.125 68.421 0.00 0.00 0.00 5.52
158 159 1.077357 GAGGAGAGAGGTGAGCGGA 60.077 63.158 0.00 0.00 0.00 5.54
159 160 1.077068 AGGAGAGAGGTGAGCGGAG 60.077 63.158 0.00 0.00 0.00 4.63
160 161 2.124693 GGAGAGAGGTGAGCGGAGG 61.125 68.421 0.00 0.00 0.00 4.30
161 162 2.043450 AGAGAGGTGAGCGGAGGG 60.043 66.667 0.00 0.00 0.00 4.30
162 163 3.151022 GAGAGGTGAGCGGAGGGG 61.151 72.222 0.00 0.00 0.00 4.79
178 179 4.722700 GGCTGGGGTGTGCGATGT 62.723 66.667 0.00 0.00 0.00 3.06
179 180 3.434319 GCTGGGGTGTGCGATGTG 61.434 66.667 0.00 0.00 0.00 3.21
180 181 2.747460 CTGGGGTGTGCGATGTGG 60.747 66.667 0.00 0.00 0.00 4.17
181 182 3.551496 CTGGGGTGTGCGATGTGGT 62.551 63.158 0.00 0.00 0.00 4.16
182 183 2.282180 GGGGTGTGCGATGTGGTT 60.282 61.111 0.00 0.00 0.00 3.67
183 184 2.625823 GGGGTGTGCGATGTGGTTG 61.626 63.158 0.00 0.00 0.00 3.77
184 185 2.255252 GGTGTGCGATGTGGTTGC 59.745 61.111 0.00 0.00 37.76 4.17
185 186 2.260869 GGTGTGCGATGTGGTTGCT 61.261 57.895 0.00 0.00 38.13 3.91
186 187 1.207593 GTGTGCGATGTGGTTGCTC 59.792 57.895 0.00 0.00 38.13 4.26
187 188 1.071299 TGTGCGATGTGGTTGCTCT 59.929 52.632 0.00 0.00 38.13 4.09
188 189 1.229975 TGTGCGATGTGGTTGCTCTG 61.230 55.000 0.00 0.00 38.13 3.35
189 190 1.672030 TGCGATGTGGTTGCTCTGG 60.672 57.895 0.00 0.00 38.13 3.86
190 191 1.375908 GCGATGTGGTTGCTCTGGA 60.376 57.895 0.00 0.00 34.16 3.86
191 192 1.639298 GCGATGTGGTTGCTCTGGAC 61.639 60.000 0.00 0.00 34.16 4.02
192 193 0.320683 CGATGTGGTTGCTCTGGACA 60.321 55.000 0.00 0.00 0.00 4.02
193 194 1.446907 GATGTGGTTGCTCTGGACAG 58.553 55.000 0.00 0.00 0.00 3.51
194 195 1.002430 GATGTGGTTGCTCTGGACAGA 59.998 52.381 1.61 1.61 35.85 3.41
195 196 0.106708 TGTGGTTGCTCTGGACAGAC 59.893 55.000 0.00 0.00 33.22 3.51
196 197 0.946221 GTGGTTGCTCTGGACAGACG 60.946 60.000 0.00 0.00 33.22 4.18
197 198 1.374758 GGTTGCTCTGGACAGACGG 60.375 63.158 0.00 0.00 33.22 4.79
198 199 1.374758 GTTGCTCTGGACAGACGGG 60.375 63.158 0.00 0.00 33.22 5.28
199 200 2.583441 TTGCTCTGGACAGACGGGG 61.583 63.158 0.00 0.00 33.22 5.73
200 201 2.680352 GCTCTGGACAGACGGGGA 60.680 66.667 0.00 0.00 33.22 4.81
201 202 2.716017 GCTCTGGACAGACGGGGAG 61.716 68.421 0.00 0.00 33.22 4.30
202 203 1.000771 CTCTGGACAGACGGGGAGA 60.001 63.158 0.00 0.00 33.22 3.71
203 204 1.000771 TCTGGACAGACGGGGAGAG 60.001 63.158 0.00 0.00 31.41 3.20
204 205 2.037367 TGGACAGACGGGGAGAGG 59.963 66.667 0.00 0.00 0.00 3.69
205 206 2.037527 GGACAGACGGGGAGAGGT 59.962 66.667 0.00 0.00 0.00 3.85
206 207 2.352032 GGACAGACGGGGAGAGGTG 61.352 68.421 0.00 0.00 0.00 4.00
207 208 2.283966 ACAGACGGGGAGAGGTGG 60.284 66.667 0.00 0.00 0.00 4.61
208 209 3.775654 CAGACGGGGAGAGGTGGC 61.776 72.222 0.00 0.00 0.00 5.01
209 210 3.999285 AGACGGGGAGAGGTGGCT 61.999 66.667 0.00 0.00 0.00 4.75
210 211 3.003763 GACGGGGAGAGGTGGCTT 61.004 66.667 0.00 0.00 0.00 4.35
211 212 3.316573 GACGGGGAGAGGTGGCTTG 62.317 68.421 0.00 0.00 0.00 4.01
212 213 4.101448 CGGGGAGAGGTGGCTTGG 62.101 72.222 0.00 0.00 0.00 3.61
213 214 3.732849 GGGGAGAGGTGGCTTGGG 61.733 72.222 0.00 0.00 0.00 4.12
214 215 3.732849 GGGAGAGGTGGCTTGGGG 61.733 72.222 0.00 0.00 0.00 4.96
215 216 2.610859 GGAGAGGTGGCTTGGGGA 60.611 66.667 0.00 0.00 0.00 4.81
216 217 2.674220 GGAGAGGTGGCTTGGGGAG 61.674 68.421 0.00 0.00 0.00 4.30
217 218 2.612115 AGAGGTGGCTTGGGGAGG 60.612 66.667 0.00 0.00 0.00 4.30
218 219 3.732849 GAGGTGGCTTGGGGAGGG 61.733 72.222 0.00 0.00 0.00 4.30
219 220 4.285790 AGGTGGCTTGGGGAGGGA 62.286 66.667 0.00 0.00 0.00 4.20
220 221 3.732849 GGTGGCTTGGGGAGGGAG 61.733 72.222 0.00 0.00 0.00 4.30
221 222 2.936032 GTGGCTTGGGGAGGGAGT 60.936 66.667 0.00 0.00 0.00 3.85
222 223 2.935481 TGGCTTGGGGAGGGAGTG 60.935 66.667 0.00 0.00 0.00 3.51
223 224 3.732849 GGCTTGGGGAGGGAGTGG 61.733 72.222 0.00 0.00 0.00 4.00
224 225 3.732849 GCTTGGGGAGGGAGTGGG 61.733 72.222 0.00 0.00 0.00 4.61
225 226 3.732849 CTTGGGGAGGGAGTGGGC 61.733 72.222 0.00 0.00 0.00 5.36
245 246 3.972227 CGGGAGCAGTTTCACTGG 58.028 61.111 6.05 0.00 46.01 4.00
246 247 2.328099 CGGGAGCAGTTTCACTGGC 61.328 63.158 6.05 0.00 46.01 4.85
247 248 2.328099 GGGAGCAGTTTCACTGGCG 61.328 63.158 6.05 0.00 46.01 5.69
248 249 2.558313 GAGCAGTTTCACTGGCGC 59.442 61.111 0.00 0.00 46.01 6.53
249 250 1.963338 GAGCAGTTTCACTGGCGCT 60.963 57.895 7.64 0.00 46.01 5.92
250 251 2.180131 GAGCAGTTTCACTGGCGCTG 62.180 60.000 7.64 2.99 46.01 5.18
251 252 2.546494 GCAGTTTCACTGGCGCTGT 61.546 57.895 7.64 3.74 46.01 4.40
252 253 1.280746 CAGTTTCACTGGCGCTGTG 59.719 57.895 21.75 21.75 42.35 3.66
253 254 2.050985 GTTTCACTGGCGCTGTGC 60.051 61.111 22.54 4.24 45.38 4.57
272 273 4.666532 GTCCACGCAAGCGCACAC 62.667 66.667 15.09 4.51 44.19 3.82
274 275 4.249020 CCACGCAAGCGCACACAA 62.249 61.111 15.09 0.00 44.19 3.33
275 276 3.018428 CACGCAAGCGCACACAAC 61.018 61.111 15.09 0.00 44.19 3.32
276 277 4.589700 ACGCAAGCGCACACAACG 62.590 61.111 15.09 6.96 44.19 4.10
278 279 3.947841 GCAAGCGCACACAACGGA 61.948 61.111 11.47 0.00 38.36 4.69
279 280 2.052237 CAAGCGCACACAACGGAC 60.052 61.111 11.47 0.00 0.00 4.79
280 281 3.636043 AAGCGCACACAACGGACG 61.636 61.111 11.47 0.00 0.00 4.79
284 285 3.632107 GCACACAACGGACGCGAA 61.632 61.111 15.93 0.00 0.00 4.70
285 286 2.244382 CACACAACGGACGCGAAC 59.756 61.111 15.93 6.28 0.00 3.95
287 288 3.025743 CACAACGGACGCGAACGA 61.026 61.111 27.44 0.00 43.93 3.85
288 289 3.026311 ACAACGGACGCGAACGAC 61.026 61.111 27.44 8.41 43.93 4.34
289 290 3.025743 CAACGGACGCGAACGACA 61.026 61.111 27.44 0.00 43.93 4.35
290 291 3.026311 AACGGACGCGAACGACAC 61.026 61.111 27.44 4.25 43.93 3.67
291 292 3.474230 AACGGACGCGAACGACACT 62.474 57.895 27.44 7.92 43.93 3.55
292 293 2.116736 AACGGACGCGAACGACACTA 62.117 55.000 27.44 0.00 43.93 2.74
293 294 1.440850 CGGACGCGAACGACACTAA 60.441 57.895 15.93 0.00 43.93 2.24
294 295 1.659262 CGGACGCGAACGACACTAAC 61.659 60.000 15.93 0.00 43.93 2.34
295 296 0.386478 GGACGCGAACGACACTAACT 60.386 55.000 15.93 0.00 43.93 2.24
296 297 1.402511 GACGCGAACGACACTAACTT 58.597 50.000 15.93 0.00 43.93 2.66
297 298 1.121967 GACGCGAACGACACTAACTTG 59.878 52.381 15.93 0.00 43.93 3.16
298 299 1.268692 ACGCGAACGACACTAACTTGA 60.269 47.619 15.93 0.00 43.93 3.02
299 300 1.382419 CGCGAACGACACTAACTTGAG 59.618 52.381 0.00 0.00 43.93 3.02
300 301 1.124477 GCGAACGACACTAACTTGAGC 59.876 52.381 0.00 0.00 0.00 4.26
301 302 1.382419 CGAACGACACTAACTTGAGCG 59.618 52.381 0.00 0.00 0.00 5.03
302 303 1.124477 GAACGACACTAACTTGAGCGC 59.876 52.381 0.00 0.00 0.00 5.92
303 304 0.666577 ACGACACTAACTTGAGCGCC 60.667 55.000 2.29 0.00 0.00 6.53
304 305 1.674611 CGACACTAACTTGAGCGCCG 61.675 60.000 2.29 0.00 0.00 6.46
305 306 0.666577 GACACTAACTTGAGCGCCGT 60.667 55.000 2.29 0.00 0.00 5.68
306 307 0.249741 ACACTAACTTGAGCGCCGTT 60.250 50.000 2.29 5.47 0.00 4.44
307 308 0.163788 CACTAACTTGAGCGCCGTTG 59.836 55.000 2.29 0.00 0.00 4.10
308 309 1.132640 CTAACTTGAGCGCCGTTGC 59.867 57.895 2.29 0.00 0.00 4.17
343 344 2.040884 CGGGAGGGAGGGATGGAA 60.041 66.667 0.00 0.00 0.00 3.53
344 345 2.143419 CGGGAGGGAGGGATGGAAG 61.143 68.421 0.00 0.00 0.00 3.46
345 346 1.004891 GGGAGGGAGGGATGGAAGT 59.995 63.158 0.00 0.00 0.00 3.01
346 347 0.624795 GGGAGGGAGGGATGGAAGTT 60.625 60.000 0.00 0.00 0.00 2.66
347 348 0.548510 GGAGGGAGGGATGGAAGTTG 59.451 60.000 0.00 0.00 0.00 3.16
348 349 0.548510 GAGGGAGGGATGGAAGTTGG 59.451 60.000 0.00 0.00 0.00 3.77
349 350 0.921256 AGGGAGGGATGGAAGTTGGG 60.921 60.000 0.00 0.00 0.00 4.12
350 351 0.919289 GGGAGGGATGGAAGTTGGGA 60.919 60.000 0.00 0.00 0.00 4.37
351 352 0.548510 GGAGGGATGGAAGTTGGGAG 59.451 60.000 0.00 0.00 0.00 4.30
352 353 1.290134 GAGGGATGGAAGTTGGGAGT 58.710 55.000 0.00 0.00 0.00 3.85
353 354 0.995024 AGGGATGGAAGTTGGGAGTG 59.005 55.000 0.00 0.00 0.00 3.51
354 355 0.681243 GGGATGGAAGTTGGGAGTGC 60.681 60.000 0.00 0.00 0.00 4.40
355 356 0.038166 GGATGGAAGTTGGGAGTGCA 59.962 55.000 0.00 0.00 0.00 4.57
356 357 1.457346 GATGGAAGTTGGGAGTGCAG 58.543 55.000 0.00 0.00 0.00 4.41
357 358 0.610232 ATGGAAGTTGGGAGTGCAGC 60.610 55.000 0.00 0.00 0.00 5.25
358 359 1.228245 GGAAGTTGGGAGTGCAGCA 60.228 57.895 0.00 0.00 0.00 4.41
359 360 1.239968 GGAAGTTGGGAGTGCAGCAG 61.240 60.000 0.00 0.00 0.00 4.24
360 361 1.860484 GAAGTTGGGAGTGCAGCAGC 61.860 60.000 0.00 0.00 42.57 5.25
361 362 3.368571 GTTGGGAGTGCAGCAGCC 61.369 66.667 0.00 0.00 41.13 4.85
362 363 3.888460 TTGGGAGTGCAGCAGCCA 61.888 61.111 14.60 0.87 41.13 4.75
363 364 3.433984 TTGGGAGTGCAGCAGCCAA 62.434 57.895 14.60 2.24 41.13 4.52
364 365 3.368571 GGGAGTGCAGCAGCCAAC 61.369 66.667 14.60 0.00 41.13 3.77
365 366 3.730761 GGAGTGCAGCAGCCAACG 61.731 66.667 8.99 0.00 41.13 4.10
366 367 3.730761 GAGTGCAGCAGCCAACGG 61.731 66.667 0.00 0.00 41.13 4.44
376 377 2.970324 GCCAACGGCGACAACAGA 60.970 61.111 16.62 0.00 39.62 3.41
377 378 2.539338 GCCAACGGCGACAACAGAA 61.539 57.895 16.62 0.00 39.62 3.02
378 379 1.278637 CCAACGGCGACAACAGAAC 59.721 57.895 16.62 0.00 0.00 3.01
379 380 1.433053 CCAACGGCGACAACAGAACA 61.433 55.000 16.62 0.00 0.00 3.18
380 381 0.375454 CAACGGCGACAACAGAACAA 59.625 50.000 16.62 0.00 0.00 2.83
381 382 0.375803 AACGGCGACAACAGAACAAC 59.624 50.000 16.62 0.00 0.00 3.32
382 383 0.741574 ACGGCGACAACAGAACAACA 60.742 50.000 16.62 0.00 0.00 3.33
383 384 0.375454 CGGCGACAACAGAACAACAA 59.625 50.000 0.00 0.00 0.00 2.83
384 385 1.594518 CGGCGACAACAGAACAACAAG 60.595 52.381 0.00 0.00 0.00 3.16
385 386 1.466855 GCGACAACAGAACAACAAGC 58.533 50.000 0.00 0.00 0.00 4.01
386 387 1.202132 GCGACAACAGAACAACAAGCA 60.202 47.619 0.00 0.00 0.00 3.91
387 388 2.708514 CGACAACAGAACAACAAGCAG 58.291 47.619 0.00 0.00 0.00 4.24
388 389 2.095853 CGACAACAGAACAACAAGCAGT 59.904 45.455 0.00 0.00 0.00 4.40
389 390 3.429085 GACAACAGAACAACAAGCAGTG 58.571 45.455 0.00 0.00 0.00 3.66
390 391 2.164219 ACAACAGAACAACAAGCAGTGG 59.836 45.455 0.00 0.00 0.00 4.00
391 392 1.392589 ACAGAACAACAAGCAGTGGG 58.607 50.000 0.00 0.00 0.00 4.61
392 393 1.340991 ACAGAACAACAAGCAGTGGGT 60.341 47.619 0.00 0.00 0.00 4.51
393 394 1.334869 CAGAACAACAAGCAGTGGGTC 59.665 52.381 0.00 0.00 38.23 4.46
394 395 0.307760 GAACAACAAGCAGTGGGTCG 59.692 55.000 0.00 0.00 25.56 4.79
395 396 1.101049 AACAACAAGCAGTGGGTCGG 61.101 55.000 0.00 0.00 0.00 4.79
396 397 2.594592 AACAAGCAGTGGGTCGGC 60.595 61.111 0.00 0.00 37.51 5.54
397 398 4.988598 ACAAGCAGTGGGTCGGCG 62.989 66.667 0.00 0.00 41.85 6.46
402 403 4.803426 CAGTGGGTCGGCGCTCTC 62.803 72.222 7.64 0.00 30.59 3.20
406 407 4.516195 GGGTCGGCGCTCTCCTTC 62.516 72.222 7.64 0.00 0.00 3.46
407 408 4.516195 GGTCGGCGCTCTCCTTCC 62.516 72.222 7.64 0.00 0.00 3.46
408 409 4.856607 GTCGGCGCTCTCCTTCCG 62.857 72.222 7.64 0.00 42.96 4.30
411 412 4.821589 GGCGCTCTCCTTCCGGTG 62.822 72.222 7.64 0.00 0.00 4.94
412 413 4.821589 GCGCTCTCCTTCCGGTGG 62.822 72.222 0.00 5.54 0.00 4.61
413 414 3.382832 CGCTCTCCTTCCGGTGGT 61.383 66.667 14.11 0.00 0.00 4.16
414 415 2.266055 GCTCTCCTTCCGGTGGTG 59.734 66.667 14.11 12.25 0.00 4.17
415 416 2.584391 GCTCTCCTTCCGGTGGTGT 61.584 63.158 14.11 0.00 0.00 4.16
416 417 1.293498 CTCTCCTTCCGGTGGTGTG 59.707 63.158 14.11 9.84 0.00 3.82
417 418 1.458777 TCTCCTTCCGGTGGTGTGT 60.459 57.895 14.11 0.00 0.00 3.72
418 419 1.004918 CTCCTTCCGGTGGTGTGTC 60.005 63.158 14.11 0.00 0.00 3.67
419 420 2.357034 CCTTCCGGTGGTGTGTCG 60.357 66.667 0.00 0.00 0.00 4.35
420 421 2.357034 CTTCCGGTGGTGTGTCGG 60.357 66.667 0.00 0.00 44.59 4.79
422 423 2.602267 TCCGGTGGTGTGTCGGAT 60.602 61.111 0.00 0.00 46.48 4.18
423 424 2.211410 TCCGGTGGTGTGTCGGATT 61.211 57.895 0.00 0.00 46.48 3.01
424 425 1.302192 CCGGTGGTGTGTCGGATTT 60.302 57.895 0.00 0.00 45.96 2.17
425 426 0.887387 CCGGTGGTGTGTCGGATTTT 60.887 55.000 0.00 0.00 45.96 1.82
426 427 0.515564 CGGTGGTGTGTCGGATTTTC 59.484 55.000 0.00 0.00 0.00 2.29
427 428 1.876416 CGGTGGTGTGTCGGATTTTCT 60.876 52.381 0.00 0.00 0.00 2.52
428 429 2.227194 GGTGGTGTGTCGGATTTTCTT 58.773 47.619 0.00 0.00 0.00 2.52
429 430 2.031157 GGTGGTGTGTCGGATTTTCTTG 60.031 50.000 0.00 0.00 0.00 3.02
430 431 2.031157 GTGGTGTGTCGGATTTTCTTGG 60.031 50.000 0.00 0.00 0.00 3.61
431 432 2.158740 TGGTGTGTCGGATTTTCTTGGA 60.159 45.455 0.00 0.00 0.00 3.53
432 433 3.081804 GGTGTGTCGGATTTTCTTGGAT 58.918 45.455 0.00 0.00 0.00 3.41
433 434 3.127030 GGTGTGTCGGATTTTCTTGGATC 59.873 47.826 0.00 0.00 0.00 3.36
434 435 3.751175 GTGTGTCGGATTTTCTTGGATCA 59.249 43.478 0.00 0.00 0.00 2.92
435 436 4.215399 GTGTGTCGGATTTTCTTGGATCAA 59.785 41.667 0.00 0.00 0.00 2.57
436 437 4.455533 TGTGTCGGATTTTCTTGGATCAAG 59.544 41.667 0.00 1.53 42.25 3.02
437 438 4.455877 GTGTCGGATTTTCTTGGATCAAGT 59.544 41.667 7.42 0.00 41.66 3.16
438 439 5.048713 GTGTCGGATTTTCTTGGATCAAGTT 60.049 40.000 7.42 0.00 41.66 2.66
439 440 5.181245 TGTCGGATTTTCTTGGATCAAGTTC 59.819 40.000 7.42 2.43 41.66 3.01
440 441 4.391830 TCGGATTTTCTTGGATCAAGTTCG 59.608 41.667 7.42 0.30 41.66 3.95
441 442 4.437390 CGGATTTTCTTGGATCAAGTTCGG 60.437 45.833 7.42 3.26 41.66 4.30
442 443 3.915437 TTTTCTTGGATCAAGTTCGGC 57.085 42.857 7.42 0.00 41.66 5.54
443 444 1.821216 TTCTTGGATCAAGTTCGGCC 58.179 50.000 7.42 0.00 41.66 6.13
444 445 0.391130 TCTTGGATCAAGTTCGGCCG 60.391 55.000 22.12 22.12 41.66 6.13
445 446 0.673644 CTTGGATCAAGTTCGGCCGT 60.674 55.000 27.15 2.66 36.79 5.68
446 447 0.672401 TTGGATCAAGTTCGGCCGTC 60.672 55.000 27.15 19.16 0.00 4.79
447 448 2.165301 GGATCAAGTTCGGCCGTCG 61.165 63.158 27.15 10.24 40.90 5.12
448 449 2.799540 GATCAAGTTCGGCCGTCGC 61.800 63.158 27.15 16.10 39.05 5.19
451 452 4.651008 AAGTTCGGCCGTCGCGAA 62.651 61.111 27.15 8.84 39.05 4.70
454 455 4.651008 TTCGGCCGTCGCGAACTT 62.651 61.111 27.15 0.00 39.05 2.66
478 479 2.420043 CACCCGTCGTGGTTCAGT 59.580 61.111 3.00 0.00 38.96 3.41
479 480 1.227438 CACCCGTCGTGGTTCAGTT 60.227 57.895 3.00 0.00 38.96 3.16
480 481 1.227438 ACCCGTCGTGGTTCAGTTG 60.227 57.895 0.11 0.00 33.91 3.16
481 482 1.959226 CCCGTCGTGGTTCAGTTGG 60.959 63.158 0.00 0.00 35.15 3.77
482 483 1.959226 CCGTCGTGGTTCAGTTGGG 60.959 63.158 0.00 0.00 0.00 4.12
483 484 2.604174 CGTCGTGGTTCAGTTGGGC 61.604 63.158 0.00 0.00 0.00 5.36
484 485 1.525077 GTCGTGGTTCAGTTGGGCA 60.525 57.895 0.00 0.00 0.00 5.36
485 486 0.889186 GTCGTGGTTCAGTTGGGCAT 60.889 55.000 0.00 0.00 0.00 4.40
486 487 0.179004 TCGTGGTTCAGTTGGGCATT 60.179 50.000 0.00 0.00 0.00 3.56
487 488 0.240945 CGTGGTTCAGTTGGGCATTC 59.759 55.000 0.00 0.00 0.00 2.67
488 489 1.620822 GTGGTTCAGTTGGGCATTCT 58.379 50.000 0.00 0.00 0.00 2.40
489 490 1.541588 GTGGTTCAGTTGGGCATTCTC 59.458 52.381 0.00 0.00 0.00 2.87
490 491 1.177401 GGTTCAGTTGGGCATTCTCC 58.823 55.000 0.00 0.00 0.00 3.71
491 492 1.177401 GTTCAGTTGGGCATTCTCCC 58.823 55.000 0.00 0.00 46.73 4.30
497 498 2.974698 GGGCATTCTCCCGCGATG 60.975 66.667 8.23 3.59 36.38 3.84
498 499 3.654020 GGCATTCTCCCGCGATGC 61.654 66.667 18.37 18.37 37.51 3.91
499 500 3.654020 GCATTCTCCCGCGATGCC 61.654 66.667 16.41 2.00 32.56 4.40
500 501 2.109799 CATTCTCCCGCGATGCCT 59.890 61.111 8.23 0.00 0.00 4.75
501 502 1.958205 CATTCTCCCGCGATGCCTC 60.958 63.158 8.23 0.00 0.00 4.70
511 512 2.413765 GATGCCTCGACTCGTCCC 59.586 66.667 0.00 0.00 0.00 4.46
512 513 3.140225 GATGCCTCGACTCGTCCCC 62.140 68.421 0.00 0.00 0.00 4.81
513 514 3.663815 ATGCCTCGACTCGTCCCCT 62.664 63.158 0.00 0.00 0.00 4.79
514 515 3.519930 GCCTCGACTCGTCCCCTC 61.520 72.222 0.00 0.00 0.00 4.30
515 516 2.272797 CCTCGACTCGTCCCCTCT 59.727 66.667 0.00 0.00 0.00 3.69
516 517 1.820481 CCTCGACTCGTCCCCTCTC 60.820 68.421 0.00 0.00 0.00 3.20
517 518 2.125229 TCGACTCGTCCCCTCTCG 60.125 66.667 0.00 0.00 0.00 4.04
518 519 2.125229 CGACTCGTCCCCTCTCGA 60.125 66.667 0.00 0.00 34.88 4.04
519 520 1.524165 CGACTCGTCCCCTCTCGAT 60.524 63.158 0.00 0.00 35.57 3.59
520 521 1.777030 CGACTCGTCCCCTCTCGATG 61.777 65.000 0.00 0.00 35.57 3.84
521 522 2.065906 GACTCGTCCCCTCTCGATGC 62.066 65.000 0.00 0.00 35.57 3.91
522 523 2.044352 TCGTCCCCTCTCGATGCA 60.044 61.111 0.00 0.00 0.00 3.96
523 524 2.069465 CTCGTCCCCTCTCGATGCAG 62.069 65.000 0.00 0.00 35.57 4.41
524 525 2.818132 GTCCCCTCTCGATGCAGG 59.182 66.667 0.00 0.00 0.00 4.85
525 526 2.060980 GTCCCCTCTCGATGCAGGT 61.061 63.158 0.00 0.00 0.00 4.00
526 527 1.758514 TCCCCTCTCGATGCAGGTC 60.759 63.158 0.00 0.00 0.00 3.85
527 528 2.801631 CCCCTCTCGATGCAGGTCC 61.802 68.421 0.00 0.00 0.00 4.46
528 529 2.801631 CCCTCTCGATGCAGGTCCC 61.802 68.421 0.00 0.00 0.00 4.46
529 530 2.060383 CCTCTCGATGCAGGTCCCA 61.060 63.158 0.00 0.00 0.00 4.37
530 531 1.617018 CCTCTCGATGCAGGTCCCAA 61.617 60.000 0.00 0.00 0.00 4.12
531 532 0.250234 CTCTCGATGCAGGTCCCAAA 59.750 55.000 0.00 0.00 0.00 3.28
532 533 0.036388 TCTCGATGCAGGTCCCAAAC 60.036 55.000 0.00 0.00 0.00 2.93
540 541 3.647771 GGTCCCAAACCGCCTCCT 61.648 66.667 0.00 0.00 38.58 3.69
541 542 2.434774 GTCCCAAACCGCCTCCTT 59.565 61.111 0.00 0.00 0.00 3.36
542 543 1.971695 GTCCCAAACCGCCTCCTTG 60.972 63.158 0.00 0.00 0.00 3.61
543 544 2.115266 CCCAAACCGCCTCCTTGT 59.885 61.111 0.00 0.00 0.00 3.16
544 545 1.971695 CCCAAACCGCCTCCTTGTC 60.972 63.158 0.00 0.00 0.00 3.18
545 546 1.971695 CCAAACCGCCTCCTTGTCC 60.972 63.158 0.00 0.00 0.00 4.02
546 547 1.971695 CAAACCGCCTCCTTGTCCC 60.972 63.158 0.00 0.00 0.00 4.46
547 548 3.546714 AAACCGCCTCCTTGTCCCG 62.547 63.158 0.00 0.00 0.00 5.14
550 551 4.016706 CGCCTCCTTGTCCCGGTT 62.017 66.667 0.00 0.00 0.00 4.44
551 552 2.359975 GCCTCCTTGTCCCGGTTG 60.360 66.667 0.00 0.00 0.00 3.77
552 553 2.351276 CCTCCTTGTCCCGGTTGG 59.649 66.667 0.00 0.00 0.00 3.77
553 554 2.359975 CTCCTTGTCCCGGTTGGC 60.360 66.667 0.00 0.00 0.00 4.52
554 555 3.920093 CTCCTTGTCCCGGTTGGCC 62.920 68.421 0.00 0.00 0.00 5.36
555 556 3.966543 CCTTGTCCCGGTTGGCCT 61.967 66.667 3.32 0.00 0.00 5.19
556 557 2.359975 CTTGTCCCGGTTGGCCTC 60.360 66.667 3.32 0.00 0.00 4.70
557 558 3.920093 CTTGTCCCGGTTGGCCTCC 62.920 68.421 3.32 5.83 0.00 4.30
587 588 2.811101 CCGTAGAGGCTGAGCAGG 59.189 66.667 6.82 0.00 0.00 4.85
588 589 2.055042 CCGTAGAGGCTGAGCAGGT 61.055 63.158 6.82 0.00 0.00 4.00
589 590 1.435515 CGTAGAGGCTGAGCAGGTC 59.564 63.158 6.82 0.00 0.00 3.85
590 591 1.435515 GTAGAGGCTGAGCAGGTCG 59.564 63.158 6.82 0.00 0.00 4.79
591 592 1.754621 TAGAGGCTGAGCAGGTCGG 60.755 63.158 6.82 3.86 34.18 4.79
729 730 2.178521 CGAGGCGCTGTAACGAGT 59.821 61.111 7.64 0.00 34.06 4.18
730 731 1.868251 CGAGGCGCTGTAACGAGTC 60.868 63.158 7.64 0.00 34.06 3.36
731 732 1.516603 GAGGCGCTGTAACGAGTCC 60.517 63.158 7.64 0.00 34.06 3.85
732 733 2.879462 GGCGCTGTAACGAGTCCG 60.879 66.667 7.64 0.00 42.50 4.79
733 734 2.879462 GCGCTGTAACGAGTCCGG 60.879 66.667 0.00 0.00 40.78 5.14
734 735 2.872557 CGCTGTAACGAGTCCGGA 59.127 61.111 0.00 0.00 40.78 5.14
735 736 1.513586 CGCTGTAACGAGTCCGGAC 60.514 63.158 27.67 27.67 40.78 4.79
736 737 1.513586 GCTGTAACGAGTCCGGACG 60.514 63.158 28.26 20.24 40.78 4.79
737 738 1.136147 CTGTAACGAGTCCGGACGG 59.864 63.158 28.26 24.87 40.78 4.79
738 739 1.300971 CTGTAACGAGTCCGGACGGA 61.301 60.000 28.26 9.76 42.90 4.69
746 747 2.738480 TCCGGACGGACTGTTTGG 59.262 61.111 9.76 0.00 39.76 3.28
747 748 2.358247 CCGGACGGACTGTTTGGG 60.358 66.667 4.40 0.00 37.50 4.12
748 749 2.358247 CGGACGGACTGTTTGGGG 60.358 66.667 0.00 0.00 0.00 4.96
749 750 2.833957 GGACGGACTGTTTGGGGT 59.166 61.111 0.00 0.00 0.00 4.95
750 751 1.302271 GGACGGACTGTTTGGGGTC 60.302 63.158 0.00 0.00 0.00 4.46
751 752 1.448497 GACGGACTGTTTGGGGTCA 59.552 57.895 0.00 0.00 34.49 4.02
752 753 0.883370 GACGGACTGTTTGGGGTCAC 60.883 60.000 0.00 0.00 34.49 3.67
753 754 1.959226 CGGACTGTTTGGGGTCACG 60.959 63.158 0.00 0.00 34.49 4.35
754 755 1.448497 GGACTGTTTGGGGTCACGA 59.552 57.895 0.00 0.00 34.49 4.35
755 756 0.602905 GGACTGTTTGGGGTCACGAG 60.603 60.000 0.00 0.00 34.49 4.18
756 757 0.602905 GACTGTTTGGGGTCACGAGG 60.603 60.000 0.00 0.00 33.19 4.63
757 758 1.966451 CTGTTTGGGGTCACGAGGC 60.966 63.158 0.00 0.00 0.00 4.70
758 759 2.671963 GTTTGGGGTCACGAGGCC 60.672 66.667 0.00 0.00 0.00 5.19
759 760 2.852075 TTTGGGGTCACGAGGCCT 60.852 61.111 3.86 3.86 0.00 5.19
760 761 2.457323 TTTGGGGTCACGAGGCCTT 61.457 57.895 6.77 0.00 0.00 4.35
761 762 2.406002 TTTGGGGTCACGAGGCCTTC 62.406 60.000 6.77 0.00 0.00 3.46
762 763 3.003763 GGGGTCACGAGGCCTTCT 61.004 66.667 6.77 0.00 0.00 2.85
763 764 2.266055 GGGTCACGAGGCCTTCTG 59.734 66.667 6.77 5.36 0.00 3.02
764 765 2.435059 GGTCACGAGGCCTTCTGC 60.435 66.667 6.77 1.86 40.16 4.26
765 766 2.811317 GTCACGAGGCCTTCTGCG 60.811 66.667 6.77 8.66 42.61 5.18
766 767 4.742201 TCACGAGGCCTTCTGCGC 62.742 66.667 6.77 0.00 42.61 6.09
788 789 4.179579 GGCGCGGATGCTCCAAAC 62.180 66.667 8.83 0.00 45.55 2.93
789 790 4.520846 GCGCGGATGCTCCAAACG 62.521 66.667 8.83 4.66 35.91 3.60
790 791 4.520846 CGCGGATGCTCCAAACGC 62.521 66.667 0.00 0.00 46.04 4.84
791 792 4.179579 GCGGATGCTCCAAACGCC 62.180 66.667 0.00 0.00 44.01 5.68
792 793 2.436646 CGGATGCTCCAAACGCCT 60.437 61.111 3.57 0.00 35.91 5.52
793 794 2.753966 CGGATGCTCCAAACGCCTG 61.754 63.158 3.57 0.00 35.91 4.85
794 795 1.675641 GGATGCTCCAAACGCCTGT 60.676 57.895 0.00 0.00 36.28 4.00
795 796 1.648467 GGATGCTCCAAACGCCTGTC 61.648 60.000 0.00 0.00 36.28 3.51
796 797 1.648467 GATGCTCCAAACGCCTGTCC 61.648 60.000 0.00 0.00 0.00 4.02
797 798 3.423154 GCTCCAAACGCCTGTCCG 61.423 66.667 0.00 0.00 0.00 4.79
798 799 3.423154 CTCCAAACGCCTGTCCGC 61.423 66.667 0.00 0.00 0.00 5.54
829 830 4.440829 GCCCCATCGCTCCCCAAA 62.441 66.667 0.00 0.00 0.00 3.28
830 831 2.440247 CCCCATCGCTCCCCAAAC 60.440 66.667 0.00 0.00 0.00 2.93
831 832 2.824041 CCCATCGCTCCCCAAACG 60.824 66.667 0.00 0.00 0.00 3.60
832 833 2.824041 CCATCGCTCCCCAAACGG 60.824 66.667 0.00 0.00 0.00 4.44
833 834 2.267642 CATCGCTCCCCAAACGGA 59.732 61.111 0.00 0.00 0.00 4.69
834 835 2.106683 CATCGCTCCCCAAACGGAC 61.107 63.158 0.00 0.00 0.00 4.79
835 836 2.589157 ATCGCTCCCCAAACGGACA 61.589 57.895 0.00 0.00 0.00 4.02
836 837 2.119484 ATCGCTCCCCAAACGGACAA 62.119 55.000 0.00 0.00 0.00 3.18
837 838 1.894756 CGCTCCCCAAACGGACAAA 60.895 57.895 0.00 0.00 0.00 2.83
838 839 1.448922 CGCTCCCCAAACGGACAAAA 61.449 55.000 0.00 0.00 0.00 2.44
839 840 0.313987 GCTCCCCAAACGGACAAAAG 59.686 55.000 0.00 0.00 0.00 2.27
840 841 0.313987 CTCCCCAAACGGACAAAAGC 59.686 55.000 0.00 0.00 0.00 3.51
841 842 1.007849 CCCCAAACGGACAAAAGCG 60.008 57.895 0.00 0.00 0.00 4.68
842 843 1.448922 CCCCAAACGGACAAAAGCGA 61.449 55.000 0.00 0.00 0.00 4.93
843 844 0.382515 CCCAAACGGACAAAAGCGAA 59.617 50.000 0.00 0.00 0.00 4.70
844 845 1.472990 CCAAACGGACAAAAGCGAAC 58.527 50.000 0.00 0.00 0.00 3.95
845 846 1.109296 CAAACGGACAAAAGCGAACG 58.891 50.000 0.00 0.00 0.00 3.95
846 847 0.728542 AAACGGACAAAAGCGAACGT 59.271 45.000 0.00 0.00 35.95 3.99
847 848 0.027063 AACGGACAAAAGCGAACGTG 59.973 50.000 0.00 0.00 34.54 4.49
848 849 1.085501 ACGGACAAAAGCGAACGTGT 61.086 50.000 0.00 0.00 32.90 4.49
849 850 0.382636 CGGACAAAAGCGAACGTGTC 60.383 55.000 0.00 6.99 39.73 3.67
850 851 3.432759 GACAAAAGCGAACGTGTCC 57.567 52.632 0.00 0.00 35.42 4.02
851 852 0.382636 GACAAAAGCGAACGTGTCCG 60.383 55.000 0.00 0.00 35.42 4.79
852 853 1.083015 CAAAAGCGAACGTGTCCGG 60.083 57.895 0.00 0.00 38.78 5.14
853 854 1.227321 AAAAGCGAACGTGTCCGGA 60.227 52.632 0.00 0.00 38.78 5.14
854 855 0.601841 AAAAGCGAACGTGTCCGGAT 60.602 50.000 7.81 0.00 38.78 4.18
855 856 1.289109 AAAGCGAACGTGTCCGGATG 61.289 55.000 7.81 3.20 38.78 3.51
856 857 3.186047 GCGAACGTGTCCGGATGG 61.186 66.667 7.81 2.12 38.78 3.51
857 858 2.508439 CGAACGTGTCCGGATGGG 60.508 66.667 7.81 1.70 38.78 4.00
858 859 2.125269 GAACGTGTCCGGATGGGG 60.125 66.667 7.81 0.00 38.78 4.96
859 860 2.926242 AACGTGTCCGGATGGGGT 60.926 61.111 7.81 0.33 38.78 4.95
860 861 2.459202 GAACGTGTCCGGATGGGGTT 62.459 60.000 7.81 10.15 38.78 4.11
861 862 2.435938 CGTGTCCGGATGGGGTTG 60.436 66.667 7.81 0.00 36.01 3.77
862 863 2.750237 GTGTCCGGATGGGGTTGC 60.750 66.667 7.81 0.00 36.01 4.17
863 864 4.402528 TGTCCGGATGGGGTTGCG 62.403 66.667 7.81 0.00 36.01 4.85
874 875 4.025401 GGTTGCGCGGTGGAGTTG 62.025 66.667 8.83 0.00 0.00 3.16
875 876 4.025401 GTTGCGCGGTGGAGTTGG 62.025 66.667 8.83 0.00 0.00 3.77
891 892 4.620937 GGCCTAATCGGACGGGGC 62.621 72.222 0.00 7.99 41.80 5.80
908 909 2.272146 CCCCCACCGGAACAGATG 59.728 66.667 9.46 0.00 0.00 2.90
976 977 0.597637 CGGCTTTGTGTCTGTCGACT 60.598 55.000 17.92 0.00 40.86 4.18
1038 1043 1.028868 GGCAGCTCACTCCACATTCC 61.029 60.000 0.00 0.00 0.00 3.01
1040 1045 0.617413 CAGCTCACTCCACATTCCCT 59.383 55.000 0.00 0.00 0.00 4.20
1058 1063 4.039092 CCCAGCCTCCCCACTGTG 62.039 72.222 0.00 0.00 31.76 3.66
1099 1109 2.422803 CCAGAGTGGAGAGCTAGCTAGT 60.423 54.545 19.38 8.16 40.96 2.57
1169 1181 1.338136 CCGGGCTCCTGGTTCTACAT 61.338 60.000 5.59 0.00 37.68 2.29
1196 1208 4.116328 CAAGCGAGGAGGCGACGA 62.116 66.667 0.00 0.00 38.18 4.20
1207 1219 4.531912 GCGACGACGGCGAGATCA 62.532 66.667 30.26 0.00 41.64 2.92
1208 1220 2.099638 CGACGACGGCGAGATCAA 59.900 61.111 22.49 0.00 41.64 2.57
1423 1457 2.672908 CTTCGACGTGGTCACCGTGT 62.673 60.000 0.00 0.00 38.92 4.49
1488 1522 2.821366 CTCAAGCTGCGGCCGATT 60.821 61.111 33.48 14.59 39.73 3.34
1518 1555 2.747855 GCCGGCAAGAAGGTGGAG 60.748 66.667 24.80 0.00 0.00 3.86
2017 2093 1.778334 GAAAATGGCGGTGGTTTGTC 58.222 50.000 0.00 0.00 0.00 3.18
2028 2104 4.102649 CGGTGGTTTGTCAAAGTTTCTTC 58.897 43.478 0.00 0.00 0.00 2.87
2069 2145 2.725450 CTGCTCGCTCGCTCGATC 60.725 66.667 0.00 0.00 37.87 3.69
2076 2152 4.263209 CTCGCTCGATCGGCTGCT 62.263 66.667 16.41 0.00 0.00 4.24
2079 2155 4.887987 GCTCGATCGGCTGCTGCT 62.888 66.667 16.41 0.00 39.59 4.24
2080 2156 2.724377 CTCGATCGGCTGCTGCTA 59.276 61.111 16.41 4.66 39.59 3.49
2101 2177 1.239296 TGCTGCGATTCTGCAAAGCT 61.239 50.000 12.28 0.00 45.74 3.74
2178 2254 3.222603 TCTCAAGGGAATCGATCGATCA 58.777 45.455 29.48 12.32 33.08 2.92
2183 2259 2.630098 AGGGAATCGATCGATCATGTGT 59.370 45.455 29.48 13.96 33.08 3.72
2184 2260 2.733552 GGGAATCGATCGATCATGTGTG 59.266 50.000 29.48 7.72 33.08 3.82
2229 2320 2.851195 ACCTGCGTCAGAATTTGTTCT 58.149 42.857 8.20 0.00 32.44 3.01
2236 2327 3.610114 CGTCAGAATTTGTTCTTGCTGGG 60.610 47.826 0.00 0.00 0.00 4.45
2237 2328 2.297033 TCAGAATTTGTTCTTGCTGGGC 59.703 45.455 0.00 0.00 0.00 5.36
2273 2364 4.683320 GGATTTTTCTTCTTGTTGCTGCTC 59.317 41.667 0.00 0.00 0.00 4.26
2275 2366 1.229428 TTCTTCTTGTTGCTGCTCCG 58.771 50.000 0.00 0.00 0.00 4.63
2276 2367 0.106708 TCTTCTTGTTGCTGCTCCGT 59.893 50.000 0.00 0.00 0.00 4.69
2277 2368 0.947244 CTTCTTGTTGCTGCTCCGTT 59.053 50.000 0.00 0.00 0.00 4.44
2279 2370 0.179059 TCTTGTTGCTGCTCCGTTGA 60.179 50.000 0.00 0.00 0.00 3.18
2282 2373 1.154150 GTTGCTGCTCCGTTGATGC 60.154 57.895 0.00 0.00 0.00 3.91
2284 2375 0.036483 TTGCTGCTCCGTTGATGCTA 60.036 50.000 0.00 0.00 0.00 3.49
2285 2376 0.036483 TGCTGCTCCGTTGATGCTAA 60.036 50.000 0.00 0.00 0.00 3.09
2286 2377 0.654683 GCTGCTCCGTTGATGCTAAG 59.345 55.000 0.00 0.00 0.00 2.18
2287 2378 2.009042 GCTGCTCCGTTGATGCTAAGT 61.009 52.381 0.00 0.00 0.00 2.24
2288 2379 1.662629 CTGCTCCGTTGATGCTAAGTG 59.337 52.381 0.00 0.00 0.00 3.16
2289 2380 0.375106 GCTCCGTTGATGCTAAGTGC 59.625 55.000 0.00 0.00 43.25 4.40
2317 2408 2.220313 GAGTACGGACTAGGTAGCTGG 58.780 57.143 0.00 3.84 35.45 4.85
2333 2429 2.653234 CTGGGGAAGCATCTAAGCAT 57.347 50.000 0.00 0.00 36.85 3.79
2334 2430 2.502295 CTGGGGAAGCATCTAAGCATC 58.498 52.381 0.00 0.00 36.85 3.91
2335 2431 1.202687 TGGGGAAGCATCTAAGCATCG 60.203 52.381 0.00 0.00 33.31 3.84
2336 2432 1.070758 GGGGAAGCATCTAAGCATCGA 59.929 52.381 0.00 0.00 33.31 3.59
2387 2484 7.480542 GCACATGTAGTACAAAAATTCGGTTAG 59.519 37.037 7.16 0.00 0.00 2.34
2392 2492 9.206870 TGTAGTACAAAAATTCGGTTAGGTTAG 57.793 33.333 0.00 0.00 0.00 2.34
2485 2684 8.015658 AGATAGAAAGAACGTGCAATTTGTTAC 58.984 33.333 0.00 0.00 0.00 2.50
2503 2702 6.425577 TGTTACCTCCGTACAATAATTTGC 57.574 37.500 0.00 0.00 36.22 3.68
2506 2705 3.869246 ACCTCCGTACAATAATTTGCTCG 59.131 43.478 0.00 0.00 36.22 5.03
2542 2742 6.442112 CCAGAAAGACAAGAAAATTCCACTC 58.558 40.000 0.00 0.00 0.00 3.51
2592 2794 4.276926 GCCCGCTTCTCAAAATCAAGATAT 59.723 41.667 0.00 0.00 0.00 1.63
2627 2829 3.565902 GTGGGCCTAGCATTGTATCTTTC 59.434 47.826 4.53 0.00 0.00 2.62
2665 2867 1.910580 GCTAAGGTACAGCTGGGCCA 61.911 60.000 24.44 5.85 36.07 5.36
2667 2869 1.212935 CTAAGGTACAGCTGGGCCAAT 59.787 52.381 24.44 17.05 0.00 3.16
2681 2883 1.668419 GCCAATGCCATCGTAGAAGT 58.332 50.000 0.00 0.00 43.58 3.01
2682 2884 1.599542 GCCAATGCCATCGTAGAAGTC 59.400 52.381 0.00 0.00 43.58 3.01
2683 2885 2.743183 GCCAATGCCATCGTAGAAGTCT 60.743 50.000 0.00 0.00 43.58 3.24
2684 2886 3.535561 CCAATGCCATCGTAGAAGTCTT 58.464 45.455 0.00 0.00 43.58 3.01
2685 2887 3.310774 CCAATGCCATCGTAGAAGTCTTG 59.689 47.826 0.00 0.00 43.58 3.02
2686 2888 3.895232 ATGCCATCGTAGAAGTCTTGT 57.105 42.857 0.00 0.00 43.58 3.16
2687 2889 5.109210 CAATGCCATCGTAGAAGTCTTGTA 58.891 41.667 0.00 0.00 43.58 2.41
2688 2890 5.537300 ATGCCATCGTAGAAGTCTTGTAT 57.463 39.130 0.00 0.00 43.58 2.29
2689 2891 6.650427 ATGCCATCGTAGAAGTCTTGTATA 57.350 37.500 0.00 0.00 43.58 1.47
2690 2892 6.073327 TGCCATCGTAGAAGTCTTGTATAG 57.927 41.667 0.00 0.00 43.58 1.31
2691 2893 5.826208 TGCCATCGTAGAAGTCTTGTATAGA 59.174 40.000 0.00 0.00 43.58 1.98
2692 2894 6.490381 TGCCATCGTAGAAGTCTTGTATAGAT 59.510 38.462 0.00 0.00 43.58 1.98
2693 2895 7.024768 GCCATCGTAGAAGTCTTGTATAGATC 58.975 42.308 0.00 0.00 43.58 2.75
2694 2896 7.308649 GCCATCGTAGAAGTCTTGTATAGATCA 60.309 40.741 0.00 0.00 43.58 2.92
2695 2897 8.233868 CCATCGTAGAAGTCTTGTATAGATCAG 58.766 40.741 0.00 0.00 43.58 2.90
2696 2898 7.731882 TCGTAGAAGTCTTGTATAGATCAGG 57.268 40.000 0.00 0.00 34.79 3.86
2697 2899 6.711194 TCGTAGAAGTCTTGTATAGATCAGGG 59.289 42.308 0.00 0.00 34.79 4.45
2698 2900 6.711194 CGTAGAAGTCTTGTATAGATCAGGGA 59.289 42.308 0.00 0.00 34.79 4.20
2699 2901 7.392113 CGTAGAAGTCTTGTATAGATCAGGGAT 59.608 40.741 0.00 0.00 34.79 3.85
2700 2902 7.775053 AGAAGTCTTGTATAGATCAGGGATC 57.225 40.000 0.00 0.00 39.17 3.36
2701 2903 7.301420 AGAAGTCTTGTATAGATCAGGGATCA 58.699 38.462 8.75 0.00 41.12 2.92
2702 2904 6.909550 AGTCTTGTATAGATCAGGGATCAC 57.090 41.667 8.75 0.00 41.12 3.06
2703 2905 6.377080 AGTCTTGTATAGATCAGGGATCACA 58.623 40.000 0.00 2.19 41.12 3.58
2704 2906 6.841229 AGTCTTGTATAGATCAGGGATCACAA 59.159 38.462 0.00 8.93 41.12 3.33
2705 2907 7.345653 AGTCTTGTATAGATCAGGGATCACAAA 59.654 37.037 0.00 0.00 41.12 2.83
2706 2908 8.153550 GTCTTGTATAGATCAGGGATCACAAAT 58.846 37.037 0.00 0.00 41.12 2.32
2707 2909 8.370940 TCTTGTATAGATCAGGGATCACAAATC 58.629 37.037 0.00 0.00 41.12 2.17
2708 2910 7.009179 TGTATAGATCAGGGATCACAAATCC 57.991 40.000 0.00 0.00 41.12 3.01
2709 2911 6.558394 TGTATAGATCAGGGATCACAAATCCA 59.442 38.462 0.00 0.00 41.12 3.41
2710 2912 4.162040 AGATCAGGGATCACAAATCCAC 57.838 45.455 0.00 0.00 41.12 4.02
2711 2913 3.524789 AGATCAGGGATCACAAATCCACA 59.475 43.478 0.00 0.00 41.12 4.17
2712 2914 3.354948 TCAGGGATCACAAATCCACAG 57.645 47.619 0.00 0.00 39.93 3.66
2713 2915 1.747355 CAGGGATCACAAATCCACAGC 59.253 52.381 0.00 0.00 39.93 4.40
2714 2916 1.355381 AGGGATCACAAATCCACAGCA 59.645 47.619 0.00 0.00 39.93 4.41
2715 2917 2.024655 AGGGATCACAAATCCACAGCAT 60.025 45.455 0.00 0.00 39.93 3.79
2716 2918 2.360165 GGGATCACAAATCCACAGCATC 59.640 50.000 6.42 0.00 39.93 3.91
2717 2919 3.285484 GGATCACAAATCCACAGCATCT 58.715 45.455 0.00 0.00 38.09 2.90
2718 2920 3.314635 GGATCACAAATCCACAGCATCTC 59.685 47.826 0.00 0.00 38.09 2.75
2719 2921 2.349590 TCACAAATCCACAGCATCTCG 58.650 47.619 0.00 0.00 0.00 4.04
2720 2922 1.089920 ACAAATCCACAGCATCTCGC 58.910 50.000 0.00 0.00 42.91 5.03
2733 2935 4.522297 GCATCTCGCGAACTAAATTTCT 57.478 40.909 11.33 0.00 0.00 2.52
2734 2936 4.266945 GCATCTCGCGAACTAAATTTCTG 58.733 43.478 11.33 0.00 0.00 3.02
2735 2937 3.991605 TCTCGCGAACTAAATTTCTGC 57.008 42.857 11.33 0.00 0.00 4.26
2736 2938 2.671396 TCTCGCGAACTAAATTTCTGCC 59.329 45.455 11.33 0.00 0.00 4.85
2737 2939 2.415168 CTCGCGAACTAAATTTCTGCCA 59.585 45.455 11.33 0.00 0.00 4.92
2738 2940 2.158841 TCGCGAACTAAATTTCTGCCAC 59.841 45.455 6.20 0.00 0.00 5.01
2739 2941 2.159627 CGCGAACTAAATTTCTGCCACT 59.840 45.455 0.00 0.00 0.00 4.00
2740 2942 3.364964 CGCGAACTAAATTTCTGCCACTT 60.365 43.478 0.00 0.00 0.00 3.16
2741 2943 4.546570 GCGAACTAAATTTCTGCCACTTT 58.453 39.130 0.00 0.00 0.00 2.66
2742 2944 4.982295 GCGAACTAAATTTCTGCCACTTTT 59.018 37.500 0.00 0.00 0.00 2.27
2743 2945 5.107875 GCGAACTAAATTTCTGCCACTTTTG 60.108 40.000 0.00 0.00 0.00 2.44
2744 2946 5.107875 CGAACTAAATTTCTGCCACTTTTGC 60.108 40.000 0.00 0.00 0.00 3.68
2745 2947 5.275067 ACTAAATTTCTGCCACTTTTGCA 57.725 34.783 0.00 0.00 37.17 4.08
2746 2948 5.669477 ACTAAATTTCTGCCACTTTTGCAA 58.331 33.333 0.00 0.00 38.46 4.08
2747 2949 4.880886 AAATTTCTGCCACTTTTGCAAC 57.119 36.364 0.00 0.00 38.46 4.17
2748 2950 1.919918 TTTCTGCCACTTTTGCAACG 58.080 45.000 0.00 0.00 38.46 4.10
2749 2951 0.102120 TTCTGCCACTTTTGCAACGG 59.898 50.000 0.00 0.00 38.46 4.44
2750 2952 1.950630 CTGCCACTTTTGCAACGGC 60.951 57.895 17.32 17.32 43.28 5.68
2751 2953 3.029735 GCCACTTTTGCAACGGCG 61.030 61.111 4.80 4.80 45.35 6.46
2752 2954 2.718731 CCACTTTTGCAACGGCGA 59.281 55.556 16.62 0.00 45.35 5.54
2753 2955 1.657181 CCACTTTTGCAACGGCGAC 60.657 57.895 16.62 2.68 45.35 5.19
2769 2971 3.739494 GGCGACGTAAATAACCTTGTTG 58.261 45.455 0.00 0.00 0.00 3.33
2770 2972 3.158268 GCGACGTAAATAACCTTGTTGC 58.842 45.455 0.00 0.00 0.00 4.17
2771 2973 3.400995 CGACGTAAATAACCTTGTTGCG 58.599 45.455 0.00 0.00 0.00 4.85
2772 2974 3.121611 CGACGTAAATAACCTTGTTGCGA 59.878 43.478 0.00 0.00 0.00 5.10
2773 2975 4.388790 GACGTAAATAACCTTGTTGCGAC 58.611 43.478 0.00 0.00 0.00 5.19
2774 2976 3.120923 ACGTAAATAACCTTGTTGCGACG 60.121 43.478 0.00 0.00 0.00 5.12
2775 2977 3.121611 CGTAAATAACCTTGTTGCGACGA 59.878 43.478 0.00 0.00 0.00 4.20
2776 2978 3.806316 AAATAACCTTGTTGCGACGAG 57.194 42.857 13.86 13.86 37.09 4.18
2780 2982 4.966005 CTTGTTGCGACGAGGAGA 57.034 55.556 13.08 0.00 34.21 3.71
2781 2983 2.730626 CTTGTTGCGACGAGGAGAG 58.269 57.895 13.08 0.00 34.21 3.20
2782 2984 0.241213 CTTGTTGCGACGAGGAGAGA 59.759 55.000 13.08 0.00 34.21 3.10
2783 2985 0.241213 TTGTTGCGACGAGGAGAGAG 59.759 55.000 0.00 0.00 0.00 3.20
2784 2986 1.515304 GTTGCGACGAGGAGAGAGC 60.515 63.158 0.00 0.00 0.00 4.09
2792 2994 0.248825 CGAGGAGAGAGCATGAACCG 60.249 60.000 0.00 0.00 0.00 4.44
2828 3030 2.200899 CACCCAAACGAAGCAAAAAGG 58.799 47.619 0.00 0.00 0.00 3.11
2829 3031 1.138069 ACCCAAACGAAGCAAAAAGGG 59.862 47.619 0.00 0.00 40.88 3.95
2850 3052 1.918253 CCACAATCTAGGCCCAGCT 59.082 57.895 0.00 0.00 0.00 4.24
2863 3065 0.680618 CCCAGCTGCAAAAACATCCA 59.319 50.000 8.66 0.00 0.00 3.41
2865 3067 2.485124 CCCAGCTGCAAAAACATCCAAA 60.485 45.455 8.66 0.00 0.00 3.28
2899 3101 3.265489 TGATCCCCAAGGGTTAGTCTTT 58.735 45.455 4.11 0.00 44.74 2.52
2902 3104 1.450025 CCCAAGGGTTAGTCTTTCGC 58.550 55.000 0.00 0.00 0.00 4.70
2916 3118 4.700365 TCGCTGTCGACGCCACTG 62.700 66.667 20.97 10.93 40.21 3.66
2954 3156 4.695455 CACTATTGAAAAGAGCCGGAAGAA 59.305 41.667 5.05 0.00 39.15 2.52
2957 3159 3.703001 TGAAAAGAGCCGGAAGAAGAT 57.297 42.857 5.05 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.902086 GTCTAGCCCGAGCCCGAC 61.902 72.222 0.00 0.00 41.25 4.79
21 22 4.208686 CACGTCTAGCCCGAGCCC 62.209 72.222 8.38 0.00 41.25 5.19
22 23 4.208686 CCACGTCTAGCCCGAGCC 62.209 72.222 8.38 0.00 41.25 4.70
23 24 4.208686 CCCACGTCTAGCCCGAGC 62.209 72.222 8.38 0.00 40.32 5.03
24 25 3.528370 CCCCACGTCTAGCCCGAG 61.528 72.222 8.38 1.30 0.00 4.63
27 28 3.682292 CTTGCCCCACGTCTAGCCC 62.682 68.421 0.00 0.00 0.00 5.19
28 29 2.125106 CTTGCCCCACGTCTAGCC 60.125 66.667 0.00 0.00 0.00 3.93
29 30 2.125106 CCTTGCCCCACGTCTAGC 60.125 66.667 0.00 0.00 0.00 3.42
30 31 2.125106 GCCTTGCCCCACGTCTAG 60.125 66.667 0.00 0.00 0.00 2.43
31 32 2.925706 TGCCTTGCCCCACGTCTA 60.926 61.111 0.00 0.00 0.00 2.59
32 33 4.335647 CTGCCTTGCCCCACGTCT 62.336 66.667 0.00 0.00 0.00 4.18
33 34 4.329545 TCTGCCTTGCCCCACGTC 62.330 66.667 0.00 0.00 0.00 4.34
34 35 4.335647 CTCTGCCTTGCCCCACGT 62.336 66.667 0.00 0.00 0.00 4.49
132 133 3.591835 CTCTCTCCTCCGCCTCGC 61.592 72.222 0.00 0.00 0.00 5.03
133 134 2.904866 CCTCTCTCCTCCGCCTCG 60.905 72.222 0.00 0.00 0.00 4.63
134 135 2.124693 CACCTCTCTCCTCCGCCTC 61.125 68.421 0.00 0.00 0.00 4.70
135 136 2.043450 CACCTCTCTCCTCCGCCT 60.043 66.667 0.00 0.00 0.00 5.52
136 137 2.043852 TCACCTCTCTCCTCCGCC 60.044 66.667 0.00 0.00 0.00 6.13
137 138 2.781158 GCTCACCTCTCTCCTCCGC 61.781 68.421 0.00 0.00 0.00 5.54
138 139 2.477176 CGCTCACCTCTCTCCTCCG 61.477 68.421 0.00 0.00 0.00 4.63
139 140 2.124693 CCGCTCACCTCTCTCCTCC 61.125 68.421 0.00 0.00 0.00 4.30
140 141 1.077357 TCCGCTCACCTCTCTCCTC 60.077 63.158 0.00 0.00 0.00 3.71
141 142 1.077068 CTCCGCTCACCTCTCTCCT 60.077 63.158 0.00 0.00 0.00 3.69
142 143 2.124693 CCTCCGCTCACCTCTCTCC 61.125 68.421 0.00 0.00 0.00 3.71
143 144 2.124693 CCCTCCGCTCACCTCTCTC 61.125 68.421 0.00 0.00 0.00 3.20
144 145 2.043450 CCCTCCGCTCACCTCTCT 60.043 66.667 0.00 0.00 0.00 3.10
145 146 3.151022 CCCCTCCGCTCACCTCTC 61.151 72.222 0.00 0.00 0.00 3.20
161 162 4.722700 ACATCGCACACCCCAGCC 62.723 66.667 0.00 0.00 0.00 4.85
162 163 3.434319 CACATCGCACACCCCAGC 61.434 66.667 0.00 0.00 0.00 4.85
163 164 2.747460 CCACATCGCACACCCCAG 60.747 66.667 0.00 0.00 0.00 4.45
164 165 3.126703 AACCACATCGCACACCCCA 62.127 57.895 0.00 0.00 0.00 4.96
165 166 2.282180 AACCACATCGCACACCCC 60.282 61.111 0.00 0.00 0.00 4.95
166 167 2.953821 CAACCACATCGCACACCC 59.046 61.111 0.00 0.00 0.00 4.61
167 168 2.187599 GAGCAACCACATCGCACACC 62.188 60.000 0.00 0.00 0.00 4.16
168 169 1.207593 GAGCAACCACATCGCACAC 59.792 57.895 0.00 0.00 0.00 3.82
169 170 1.071299 AGAGCAACCACATCGCACA 59.929 52.632 0.00 0.00 0.00 4.57
170 171 1.499056 CAGAGCAACCACATCGCAC 59.501 57.895 0.00 0.00 0.00 5.34
171 172 1.672030 CCAGAGCAACCACATCGCA 60.672 57.895 0.00 0.00 0.00 5.10
172 173 1.375908 TCCAGAGCAACCACATCGC 60.376 57.895 0.00 0.00 0.00 4.58
173 174 0.320683 TGTCCAGAGCAACCACATCG 60.321 55.000 0.00 0.00 0.00 3.84
174 175 1.002430 TCTGTCCAGAGCAACCACATC 59.998 52.381 0.00 0.00 32.82 3.06
175 176 1.059098 TCTGTCCAGAGCAACCACAT 58.941 50.000 0.00 0.00 32.82 3.21
176 177 0.106708 GTCTGTCCAGAGCAACCACA 59.893 55.000 0.00 0.00 38.27 4.17
177 178 0.946221 CGTCTGTCCAGAGCAACCAC 60.946 60.000 0.00 0.00 38.27 4.16
178 179 1.367471 CGTCTGTCCAGAGCAACCA 59.633 57.895 0.00 0.00 38.27 3.67
179 180 1.374758 CCGTCTGTCCAGAGCAACC 60.375 63.158 0.00 0.00 38.27 3.77
180 181 1.374758 CCCGTCTGTCCAGAGCAAC 60.375 63.158 0.00 0.00 38.27 4.17
181 182 2.583441 CCCCGTCTGTCCAGAGCAA 61.583 63.158 0.00 0.00 38.27 3.91
182 183 2.997315 CCCCGTCTGTCCAGAGCA 60.997 66.667 0.00 0.00 38.27 4.26
183 184 2.680352 TCCCCGTCTGTCCAGAGC 60.680 66.667 0.00 0.00 38.27 4.09
184 185 1.000771 TCTCCCCGTCTGTCCAGAG 60.001 63.158 0.00 0.00 38.27 3.35
185 186 1.000771 CTCTCCCCGTCTGTCCAGA 60.001 63.158 0.00 0.00 34.56 3.86
186 187 2.055042 CCTCTCCCCGTCTGTCCAG 61.055 68.421 0.00 0.00 0.00 3.86
187 188 2.037367 CCTCTCCCCGTCTGTCCA 59.963 66.667 0.00 0.00 0.00 4.02
188 189 2.037527 ACCTCTCCCCGTCTGTCC 59.962 66.667 0.00 0.00 0.00 4.02
189 190 2.352032 CCACCTCTCCCCGTCTGTC 61.352 68.421 0.00 0.00 0.00 3.51
190 191 2.283966 CCACCTCTCCCCGTCTGT 60.284 66.667 0.00 0.00 0.00 3.41
191 192 3.775654 GCCACCTCTCCCCGTCTG 61.776 72.222 0.00 0.00 0.00 3.51
192 193 3.547787 AAGCCACCTCTCCCCGTCT 62.548 63.158 0.00 0.00 0.00 4.18
193 194 3.003763 AAGCCACCTCTCCCCGTC 61.004 66.667 0.00 0.00 0.00 4.79
194 195 3.322466 CAAGCCACCTCTCCCCGT 61.322 66.667 0.00 0.00 0.00 5.28
195 196 4.101448 CCAAGCCACCTCTCCCCG 62.101 72.222 0.00 0.00 0.00 5.73
196 197 3.732849 CCCAAGCCACCTCTCCCC 61.733 72.222 0.00 0.00 0.00 4.81
197 198 3.732849 CCCCAAGCCACCTCTCCC 61.733 72.222 0.00 0.00 0.00 4.30
198 199 2.610859 TCCCCAAGCCACCTCTCC 60.611 66.667 0.00 0.00 0.00 3.71
199 200 2.674220 CCTCCCCAAGCCACCTCTC 61.674 68.421 0.00 0.00 0.00 3.20
200 201 2.612115 CCTCCCCAAGCCACCTCT 60.612 66.667 0.00 0.00 0.00 3.69
201 202 3.732849 CCCTCCCCAAGCCACCTC 61.733 72.222 0.00 0.00 0.00 3.85
202 203 4.285790 TCCCTCCCCAAGCCACCT 62.286 66.667 0.00 0.00 0.00 4.00
203 204 3.732849 CTCCCTCCCCAAGCCACC 61.733 72.222 0.00 0.00 0.00 4.61
204 205 2.936032 ACTCCCTCCCCAAGCCAC 60.936 66.667 0.00 0.00 0.00 5.01
205 206 2.935481 CACTCCCTCCCCAAGCCA 60.935 66.667 0.00 0.00 0.00 4.75
206 207 3.732849 CCACTCCCTCCCCAAGCC 61.733 72.222 0.00 0.00 0.00 4.35
207 208 3.732849 CCCACTCCCTCCCCAAGC 61.733 72.222 0.00 0.00 0.00 4.01
208 209 3.732849 GCCCACTCCCTCCCCAAG 61.733 72.222 0.00 0.00 0.00 3.61
225 226 3.423154 GTGAAACTGCTCCCGCCG 61.423 66.667 0.00 0.00 34.43 6.46
236 237 2.050985 GCACAGCGCCAGTGAAAC 60.051 61.111 28.35 11.55 39.30 2.78
248 249 3.716006 CTTGCGTGGACGGCACAG 61.716 66.667 0.71 0.00 40.23 3.66
255 256 4.666532 GTGTGCGCTTGCGTGGAC 62.667 66.667 16.38 10.94 43.34 4.02
257 258 4.249020 TTGTGTGCGCTTGCGTGG 62.249 61.111 16.38 0.00 43.34 4.94
258 259 3.018428 GTTGTGTGCGCTTGCGTG 61.018 61.111 16.38 0.00 43.34 5.34
259 260 4.589700 CGTTGTGTGCGCTTGCGT 62.590 61.111 16.38 0.00 43.34 5.24
261 262 3.947841 TCCGTTGTGTGCGCTTGC 61.948 61.111 9.73 0.00 39.78 4.01
262 263 2.052237 GTCCGTTGTGTGCGCTTG 60.052 61.111 9.73 0.00 0.00 4.01
263 264 3.636043 CGTCCGTTGTGTGCGCTT 61.636 61.111 9.73 0.00 0.00 4.68
267 268 3.632107 TTCGCGTCCGTTGTGTGC 61.632 61.111 5.77 0.00 35.54 4.57
268 269 2.244382 GTTCGCGTCCGTTGTGTG 59.756 61.111 5.77 0.00 35.54 3.82
269 270 3.324671 CGTTCGCGTCCGTTGTGT 61.325 61.111 5.77 0.00 35.57 3.72
270 271 3.025743 TCGTTCGCGTCCGTTGTG 61.026 61.111 5.77 0.00 42.11 3.33
271 272 3.026311 GTCGTTCGCGTCCGTTGT 61.026 61.111 5.77 0.00 42.11 3.32
272 273 3.025743 TGTCGTTCGCGTCCGTTG 61.026 61.111 5.77 0.00 42.11 4.10
273 274 2.116736 TAGTGTCGTTCGCGTCCGTT 62.117 55.000 5.77 1.15 42.11 4.44
274 275 2.116736 TTAGTGTCGTTCGCGTCCGT 62.117 55.000 5.77 0.00 42.11 4.69
275 276 1.440850 TTAGTGTCGTTCGCGTCCG 60.441 57.895 5.77 10.06 42.11 4.79
276 277 0.386478 AGTTAGTGTCGTTCGCGTCC 60.386 55.000 5.77 0.00 42.11 4.79
277 278 1.121967 CAAGTTAGTGTCGTTCGCGTC 59.878 52.381 5.77 0.00 42.11 5.19
278 279 1.126079 CAAGTTAGTGTCGTTCGCGT 58.874 50.000 5.77 0.00 42.11 6.01
279 280 1.382419 CTCAAGTTAGTGTCGTTCGCG 59.618 52.381 0.00 0.00 42.98 5.87
280 281 1.124477 GCTCAAGTTAGTGTCGTTCGC 59.876 52.381 0.00 0.00 0.00 4.70
281 282 1.382419 CGCTCAAGTTAGTGTCGTTCG 59.618 52.381 0.00 0.00 0.00 3.95
282 283 1.124477 GCGCTCAAGTTAGTGTCGTTC 59.876 52.381 0.00 0.00 0.00 3.95
283 284 1.137513 GCGCTCAAGTTAGTGTCGTT 58.862 50.000 0.00 0.00 0.00 3.85
284 285 0.666577 GGCGCTCAAGTTAGTGTCGT 60.667 55.000 7.64 0.00 0.00 4.34
285 286 1.674611 CGGCGCTCAAGTTAGTGTCG 61.675 60.000 7.64 0.00 46.94 4.35
286 287 0.666577 ACGGCGCTCAAGTTAGTGTC 60.667 55.000 6.90 0.00 0.00 3.67
287 288 0.249741 AACGGCGCTCAAGTTAGTGT 60.250 50.000 6.90 0.00 0.00 3.55
288 289 0.163788 CAACGGCGCTCAAGTTAGTG 59.836 55.000 6.90 0.00 0.00 2.74
289 290 1.566018 GCAACGGCGCTCAAGTTAGT 61.566 55.000 6.90 0.00 0.00 2.24
290 291 1.132640 GCAACGGCGCTCAAGTTAG 59.867 57.895 6.90 5.73 0.00 2.34
291 292 3.249999 GCAACGGCGCTCAAGTTA 58.750 55.556 6.90 0.00 0.00 2.24
322 323 4.173701 ATCCCTCCCTCCCGGTCC 62.174 72.222 0.00 0.00 0.00 4.46
323 324 2.844839 CATCCCTCCCTCCCGGTC 60.845 72.222 0.00 0.00 0.00 4.79
324 325 4.499116 CCATCCCTCCCTCCCGGT 62.499 72.222 0.00 0.00 0.00 5.28
325 326 3.714078 TTCCATCCCTCCCTCCCGG 62.714 68.421 0.00 0.00 0.00 5.73
326 327 2.040884 TTCCATCCCTCCCTCCCG 60.041 66.667 0.00 0.00 0.00 5.14
327 328 0.624795 AACTTCCATCCCTCCCTCCC 60.625 60.000 0.00 0.00 0.00 4.30
328 329 0.548510 CAACTTCCATCCCTCCCTCC 59.451 60.000 0.00 0.00 0.00 4.30
329 330 0.548510 CCAACTTCCATCCCTCCCTC 59.451 60.000 0.00 0.00 0.00 4.30
330 331 0.921256 CCCAACTTCCATCCCTCCCT 60.921 60.000 0.00 0.00 0.00 4.20
331 332 0.919289 TCCCAACTTCCATCCCTCCC 60.919 60.000 0.00 0.00 0.00 4.30
332 333 0.548510 CTCCCAACTTCCATCCCTCC 59.451 60.000 0.00 0.00 0.00 4.30
333 334 1.065126 CACTCCCAACTTCCATCCCTC 60.065 57.143 0.00 0.00 0.00 4.30
334 335 0.995024 CACTCCCAACTTCCATCCCT 59.005 55.000 0.00 0.00 0.00 4.20
335 336 0.681243 GCACTCCCAACTTCCATCCC 60.681 60.000 0.00 0.00 0.00 3.85
336 337 0.038166 TGCACTCCCAACTTCCATCC 59.962 55.000 0.00 0.00 0.00 3.51
337 338 1.457346 CTGCACTCCCAACTTCCATC 58.543 55.000 0.00 0.00 0.00 3.51
338 339 0.610232 GCTGCACTCCCAACTTCCAT 60.610 55.000 0.00 0.00 0.00 3.41
339 340 1.228245 GCTGCACTCCCAACTTCCA 60.228 57.895 0.00 0.00 0.00 3.53
340 341 1.228245 TGCTGCACTCCCAACTTCC 60.228 57.895 0.00 0.00 0.00 3.46
341 342 1.860484 GCTGCTGCACTCCCAACTTC 61.860 60.000 11.11 0.00 39.41 3.01
342 343 1.900498 GCTGCTGCACTCCCAACTT 60.900 57.895 11.11 0.00 39.41 2.66
343 344 2.282040 GCTGCTGCACTCCCAACT 60.282 61.111 11.11 0.00 39.41 3.16
344 345 3.368571 GGCTGCTGCACTCCCAAC 61.369 66.667 17.89 0.00 41.91 3.77
345 346 3.433984 TTGGCTGCTGCACTCCCAA 62.434 57.895 17.89 16.26 41.91 4.12
346 347 3.888460 TTGGCTGCTGCACTCCCA 61.888 61.111 17.89 2.88 41.91 4.37
347 348 3.368571 GTTGGCTGCTGCACTCCC 61.369 66.667 17.89 0.00 41.91 4.30
348 349 3.730761 CGTTGGCTGCTGCACTCC 61.731 66.667 17.89 3.59 41.91 3.85
349 350 3.730761 CCGTTGGCTGCTGCACTC 61.731 66.667 17.89 5.61 41.91 3.51
359 360 2.539338 TTCTGTTGTCGCCGTTGGC 61.539 57.895 0.00 0.00 46.75 4.52
360 361 1.278637 GTTCTGTTGTCGCCGTTGG 59.721 57.895 0.00 0.00 0.00 3.77
361 362 0.375454 TTGTTCTGTTGTCGCCGTTG 59.625 50.000 0.00 0.00 0.00 4.10
362 363 0.375803 GTTGTTCTGTTGTCGCCGTT 59.624 50.000 0.00 0.00 0.00 4.44
363 364 0.741574 TGTTGTTCTGTTGTCGCCGT 60.742 50.000 0.00 0.00 0.00 5.68
364 365 0.375454 TTGTTGTTCTGTTGTCGCCG 59.625 50.000 0.00 0.00 0.00 6.46
365 366 1.859998 GCTTGTTGTTCTGTTGTCGCC 60.860 52.381 0.00 0.00 0.00 5.54
366 367 1.202132 TGCTTGTTGTTCTGTTGTCGC 60.202 47.619 0.00 0.00 0.00 5.19
367 368 2.095853 ACTGCTTGTTGTTCTGTTGTCG 59.904 45.455 0.00 0.00 0.00 4.35
368 369 3.429085 CACTGCTTGTTGTTCTGTTGTC 58.571 45.455 0.00 0.00 0.00 3.18
369 370 2.164219 CCACTGCTTGTTGTTCTGTTGT 59.836 45.455 0.00 0.00 0.00 3.32
370 371 2.480073 CCCACTGCTTGTTGTTCTGTTG 60.480 50.000 0.00 0.00 0.00 3.33
371 372 1.750778 CCCACTGCTTGTTGTTCTGTT 59.249 47.619 0.00 0.00 0.00 3.16
372 373 1.340991 ACCCACTGCTTGTTGTTCTGT 60.341 47.619 0.00 0.00 0.00 3.41
373 374 1.334869 GACCCACTGCTTGTTGTTCTG 59.665 52.381 0.00 0.00 0.00 3.02
374 375 1.680338 GACCCACTGCTTGTTGTTCT 58.320 50.000 0.00 0.00 0.00 3.01
375 376 0.307760 CGACCCACTGCTTGTTGTTC 59.692 55.000 0.00 0.00 0.00 3.18
376 377 1.101049 CCGACCCACTGCTTGTTGTT 61.101 55.000 0.00 0.00 0.00 2.83
377 378 1.525995 CCGACCCACTGCTTGTTGT 60.526 57.895 0.00 0.00 0.00 3.32
378 379 2.908073 GCCGACCCACTGCTTGTTG 61.908 63.158 0.00 0.00 0.00 3.33
379 380 2.594592 GCCGACCCACTGCTTGTT 60.595 61.111 0.00 0.00 0.00 2.83
380 381 4.988598 CGCCGACCCACTGCTTGT 62.989 66.667 0.00 0.00 0.00 3.16
385 386 4.803426 GAGAGCGCCGACCCACTG 62.803 72.222 2.29 0.00 0.00 3.66
389 390 4.516195 GAAGGAGAGCGCCGACCC 62.516 72.222 2.29 0.00 0.00 4.46
390 391 4.516195 GGAAGGAGAGCGCCGACC 62.516 72.222 2.29 4.82 0.00 4.79
391 392 4.856607 CGGAAGGAGAGCGCCGAC 62.857 72.222 2.29 0.00 46.29 4.79
403 404 2.357034 CCGACACACCACCGGAAG 60.357 66.667 9.46 0.00 45.58 3.46
406 407 0.887387 AAAATCCGACACACCACCGG 60.887 55.000 0.00 0.00 44.22 5.28
407 408 0.515564 GAAAATCCGACACACCACCG 59.484 55.000 0.00 0.00 0.00 4.94
408 409 1.892209 AGAAAATCCGACACACCACC 58.108 50.000 0.00 0.00 0.00 4.61
409 410 2.031157 CCAAGAAAATCCGACACACCAC 60.031 50.000 0.00 0.00 0.00 4.16
410 411 2.158740 TCCAAGAAAATCCGACACACCA 60.159 45.455 0.00 0.00 0.00 4.17
411 412 2.500229 TCCAAGAAAATCCGACACACC 58.500 47.619 0.00 0.00 0.00 4.16
412 413 3.751175 TGATCCAAGAAAATCCGACACAC 59.249 43.478 0.00 0.00 0.00 3.82
413 414 4.014569 TGATCCAAGAAAATCCGACACA 57.985 40.909 0.00 0.00 0.00 3.72
414 415 4.455877 ACTTGATCCAAGAAAATCCGACAC 59.544 41.667 13.00 0.00 43.42 3.67
415 416 4.651778 ACTTGATCCAAGAAAATCCGACA 58.348 39.130 13.00 0.00 43.42 4.35
416 417 5.629079 AACTTGATCCAAGAAAATCCGAC 57.371 39.130 13.00 0.00 43.42 4.79
417 418 4.391830 CGAACTTGATCCAAGAAAATCCGA 59.608 41.667 13.00 0.00 43.42 4.55
418 419 4.437390 CCGAACTTGATCCAAGAAAATCCG 60.437 45.833 13.00 6.84 43.42 4.18
419 420 4.675408 GCCGAACTTGATCCAAGAAAATCC 60.675 45.833 13.00 0.00 43.42 3.01
420 421 4.415735 GCCGAACTTGATCCAAGAAAATC 58.584 43.478 13.00 5.50 43.42 2.17
421 422 3.193479 GGCCGAACTTGATCCAAGAAAAT 59.807 43.478 13.00 0.00 43.42 1.82
422 423 2.556622 GGCCGAACTTGATCCAAGAAAA 59.443 45.455 13.00 0.00 43.42 2.29
423 424 2.159382 GGCCGAACTTGATCCAAGAAA 58.841 47.619 13.00 0.00 43.42 2.52
424 425 1.821216 GGCCGAACTTGATCCAAGAA 58.179 50.000 13.00 0.00 43.42 2.52
425 426 0.391130 CGGCCGAACTTGATCCAAGA 60.391 55.000 24.07 0.00 43.42 3.02
426 427 0.673644 ACGGCCGAACTTGATCCAAG 60.674 55.000 35.90 5.26 45.85 3.61
427 428 0.672401 GACGGCCGAACTTGATCCAA 60.672 55.000 35.90 0.00 0.00 3.53
428 429 1.079405 GACGGCCGAACTTGATCCA 60.079 57.895 35.90 0.00 0.00 3.41
429 430 2.165301 CGACGGCCGAACTTGATCC 61.165 63.158 35.90 7.58 41.76 3.36
430 431 2.799540 GCGACGGCCGAACTTGATC 61.800 63.158 35.90 16.32 41.76 2.92
431 432 2.813908 GCGACGGCCGAACTTGAT 60.814 61.111 35.90 7.12 41.76 2.57
434 435 4.651008 TTCGCGACGGCCGAACTT 62.651 61.111 35.90 9.58 41.76 2.66
437 438 4.651008 AAGTTCGCGACGGCCGAA 62.651 61.111 35.90 12.97 41.76 4.30
461 462 1.227438 AACTGAACCACGACGGGTG 60.227 57.895 8.51 2.22 46.57 4.61
462 463 1.227438 CAACTGAACCACGACGGGT 60.227 57.895 0.00 0.49 45.04 5.28
463 464 1.959226 CCAACTGAACCACGACGGG 60.959 63.158 0.00 0.00 40.22 5.28
464 465 1.959226 CCCAACTGAACCACGACGG 60.959 63.158 0.00 0.00 42.50 4.79
465 466 2.604174 GCCCAACTGAACCACGACG 61.604 63.158 0.00 0.00 0.00 5.12
466 467 0.889186 ATGCCCAACTGAACCACGAC 60.889 55.000 0.00 0.00 0.00 4.34
467 468 0.179004 AATGCCCAACTGAACCACGA 60.179 50.000 0.00 0.00 0.00 4.35
468 469 0.240945 GAATGCCCAACTGAACCACG 59.759 55.000 0.00 0.00 0.00 4.94
469 470 1.541588 GAGAATGCCCAACTGAACCAC 59.458 52.381 0.00 0.00 0.00 4.16
470 471 1.547675 GGAGAATGCCCAACTGAACCA 60.548 52.381 0.00 0.00 0.00 3.67
471 472 1.177401 GGAGAATGCCCAACTGAACC 58.823 55.000 0.00 0.00 0.00 3.62
481 482 3.654020 GCATCGCGGGAGAATGCC 61.654 66.667 16.41 2.00 46.96 4.40
482 483 3.654020 GGCATCGCGGGAGAATGC 61.654 66.667 18.37 18.37 44.67 3.56
483 484 1.958205 GAGGCATCGCGGGAGAATG 60.958 63.158 6.13 2.87 0.00 2.67
484 485 2.423446 GAGGCATCGCGGGAGAAT 59.577 61.111 6.13 0.00 0.00 2.40
485 486 4.207281 CGAGGCATCGCGGGAGAA 62.207 66.667 8.22 0.00 42.97 2.87
494 495 2.413765 GGGACGAGTCGAGGCATC 59.586 66.667 21.50 5.48 0.00 3.91
495 496 3.148279 GGGGACGAGTCGAGGCAT 61.148 66.667 21.50 0.00 0.00 4.40
496 497 4.361971 AGGGGACGAGTCGAGGCA 62.362 66.667 21.50 0.00 0.00 4.75
497 498 3.519930 GAGGGGACGAGTCGAGGC 61.520 72.222 21.50 7.87 0.00 4.70
498 499 1.820481 GAGAGGGGACGAGTCGAGG 60.820 68.421 21.50 0.00 0.00 4.63
499 500 2.174969 CGAGAGGGGACGAGTCGAG 61.175 68.421 21.50 0.00 34.80 4.04
500 501 1.969200 ATCGAGAGGGGACGAGTCGA 61.969 60.000 21.50 0.00 42.19 4.20
501 502 1.524165 ATCGAGAGGGGACGAGTCG 60.524 63.158 11.85 11.85 41.63 4.18
502 503 2.026522 CATCGAGAGGGGACGAGTC 58.973 63.158 0.00 0.00 41.63 3.36
503 504 2.122167 GCATCGAGAGGGGACGAGT 61.122 63.158 0.00 0.00 41.63 4.18
504 505 2.069465 CTGCATCGAGAGGGGACGAG 62.069 65.000 0.00 0.00 41.63 4.18
505 506 2.044352 TGCATCGAGAGGGGACGA 60.044 61.111 0.00 0.00 42.49 4.20
506 507 2.415010 CTGCATCGAGAGGGGACG 59.585 66.667 0.00 0.00 0.00 4.79
507 508 2.022240 GACCTGCATCGAGAGGGGAC 62.022 65.000 11.50 0.00 33.16 4.46
508 509 1.758514 GACCTGCATCGAGAGGGGA 60.759 63.158 11.50 0.00 33.16 4.81
509 510 2.801631 GGACCTGCATCGAGAGGGG 61.802 68.421 11.50 4.71 33.16 4.79
510 511 2.801631 GGGACCTGCATCGAGAGGG 61.802 68.421 11.50 4.40 33.16 4.30
511 512 1.617018 TTGGGACCTGCATCGAGAGG 61.617 60.000 6.41 6.41 35.26 3.69
512 513 0.250234 TTTGGGACCTGCATCGAGAG 59.750 55.000 0.00 0.00 0.00 3.20
513 514 0.036388 GTTTGGGACCTGCATCGAGA 60.036 55.000 0.00 0.00 0.00 4.04
514 515 1.026718 GGTTTGGGACCTGCATCGAG 61.027 60.000 0.00 0.00 45.55 4.04
515 516 1.002624 GGTTTGGGACCTGCATCGA 60.003 57.895 0.00 0.00 45.55 3.59
516 517 2.398554 CGGTTTGGGACCTGCATCG 61.399 63.158 0.00 0.00 46.92 3.84
517 518 2.700773 GCGGTTTGGGACCTGCATC 61.701 63.158 0.00 0.00 46.92 3.91
518 519 2.676471 GCGGTTTGGGACCTGCAT 60.676 61.111 0.00 0.00 46.92 3.96
519 520 4.966787 GGCGGTTTGGGACCTGCA 62.967 66.667 11.81 0.00 46.92 4.41
520 521 4.660938 AGGCGGTTTGGGACCTGC 62.661 66.667 0.00 0.00 46.92 4.85
521 522 2.359975 GAGGCGGTTTGGGACCTG 60.360 66.667 0.00 0.00 46.92 4.00
522 523 3.647771 GGAGGCGGTTTGGGACCT 61.648 66.667 0.00 0.00 46.92 3.85
523 524 3.205851 AAGGAGGCGGTTTGGGACC 62.206 63.158 0.00 0.00 45.55 4.46
524 525 1.971695 CAAGGAGGCGGTTTGGGAC 60.972 63.158 0.00 0.00 0.00 4.46
525 526 2.406002 GACAAGGAGGCGGTTTGGGA 62.406 60.000 3.67 0.00 0.00 4.37
526 527 1.971695 GACAAGGAGGCGGTTTGGG 60.972 63.158 3.67 0.00 0.00 4.12
527 528 1.971695 GGACAAGGAGGCGGTTTGG 60.972 63.158 3.67 0.00 0.00 3.28
528 529 1.971695 GGGACAAGGAGGCGGTTTG 60.972 63.158 0.00 0.00 0.00 2.93
529 530 2.434774 GGGACAAGGAGGCGGTTT 59.565 61.111 0.00 0.00 0.00 3.27
530 531 4.016706 CGGGACAAGGAGGCGGTT 62.017 66.667 0.00 0.00 0.00 4.44
533 534 4.016706 AACCGGGACAAGGAGGCG 62.017 66.667 6.32 0.00 0.00 5.52
534 535 2.359975 CAACCGGGACAAGGAGGC 60.360 66.667 6.32 0.00 0.00 4.70
535 536 2.351276 CCAACCGGGACAAGGAGG 59.649 66.667 6.32 0.00 40.01 4.30
536 537 2.359975 GCCAACCGGGACAAGGAG 60.360 66.667 6.32 0.00 40.01 3.69
544 545 4.293671 TTTGGGAGGCCAACCGGG 62.294 66.667 6.32 0.00 42.76 5.73
545 546 2.676471 CTTTGGGAGGCCAACCGG 60.676 66.667 5.01 0.00 42.76 5.28
546 547 2.676471 CCTTTGGGAGGCCAACCG 60.676 66.667 5.01 0.00 42.76 4.44
547 548 1.606601 GTCCTTTGGGAGGCCAACC 60.607 63.158 5.01 7.24 45.87 3.77
548 549 1.971695 CGTCCTTTGGGAGGCCAAC 60.972 63.158 5.01 0.00 45.87 3.77
549 550 2.434331 CGTCCTTTGGGAGGCCAA 59.566 61.111 5.01 0.00 45.87 4.52
557 558 4.745751 TACGGCCGCGTCCTTTGG 62.746 66.667 28.58 0.00 0.00 3.28
558 559 3.186047 CTACGGCCGCGTCCTTTG 61.186 66.667 28.58 0.87 0.00 2.77
559 560 3.352338 CTCTACGGCCGCGTCCTTT 62.352 63.158 28.58 6.16 0.00 3.11
560 561 3.823330 CTCTACGGCCGCGTCCTT 61.823 66.667 28.58 7.06 0.00 3.36
570 571 2.010582 GACCTGCTCAGCCTCTACGG 62.011 65.000 0.00 0.00 0.00 4.02
571 572 1.435515 GACCTGCTCAGCCTCTACG 59.564 63.158 0.00 0.00 0.00 3.51
572 573 1.435515 CGACCTGCTCAGCCTCTAC 59.564 63.158 0.00 0.00 0.00 2.59
573 574 1.754621 CCGACCTGCTCAGCCTCTA 60.755 63.158 0.00 0.00 0.00 2.43
574 575 3.073735 CCGACCTGCTCAGCCTCT 61.074 66.667 0.00 0.00 0.00 3.69
575 576 4.828925 GCCGACCTGCTCAGCCTC 62.829 72.222 0.00 0.00 0.00 4.70
712 713 1.868251 GACTCGTTACAGCGCCTCG 60.868 63.158 2.29 2.09 0.00 4.63
713 714 1.516603 GGACTCGTTACAGCGCCTC 60.517 63.158 2.29 0.00 0.00 4.70
714 715 2.572284 GGACTCGTTACAGCGCCT 59.428 61.111 2.29 0.00 0.00 5.52
715 716 2.879462 CGGACTCGTTACAGCGCC 60.879 66.667 2.29 0.00 0.00 6.53
716 717 2.879462 CCGGACTCGTTACAGCGC 60.879 66.667 0.00 0.00 33.95 5.92
717 718 1.513586 GTCCGGACTCGTTACAGCG 60.514 63.158 27.64 0.00 33.95 5.18
718 719 1.513586 CGTCCGGACTCGTTACAGC 60.514 63.158 30.92 1.97 33.95 4.40
719 720 1.136147 CCGTCCGGACTCGTTACAG 59.864 63.158 30.92 13.39 37.50 2.74
720 721 1.302431 TCCGTCCGGACTCGTTACA 60.302 57.895 30.92 5.07 39.76 2.41
721 722 3.578456 TCCGTCCGGACTCGTTAC 58.422 61.111 30.92 5.00 39.76 2.50
729 730 2.738480 CCAAACAGTCCGTCCGGA 59.262 61.111 0.00 0.00 42.90 5.14
730 731 2.358247 CCCAAACAGTCCGTCCGG 60.358 66.667 0.00 0.00 0.00 5.14
731 732 2.358247 CCCCAAACAGTCCGTCCG 60.358 66.667 0.00 0.00 0.00 4.79
732 733 1.302271 GACCCCAAACAGTCCGTCC 60.302 63.158 0.00 0.00 0.00 4.79
733 734 0.883370 GTGACCCCAAACAGTCCGTC 60.883 60.000 0.00 0.00 31.76 4.79
734 735 1.147600 GTGACCCCAAACAGTCCGT 59.852 57.895 0.00 0.00 31.76 4.69
735 736 1.959226 CGTGACCCCAAACAGTCCG 60.959 63.158 0.00 0.00 31.76 4.79
736 737 0.602905 CTCGTGACCCCAAACAGTCC 60.603 60.000 0.00 0.00 31.76 3.85
737 738 0.602905 CCTCGTGACCCCAAACAGTC 60.603 60.000 0.00 0.00 0.00 3.51
738 739 1.450211 CCTCGTGACCCCAAACAGT 59.550 57.895 0.00 0.00 0.00 3.55
739 740 1.966451 GCCTCGTGACCCCAAACAG 60.966 63.158 0.00 0.00 0.00 3.16
740 741 2.112297 GCCTCGTGACCCCAAACA 59.888 61.111 0.00 0.00 0.00 2.83
741 742 2.671963 GGCCTCGTGACCCCAAAC 60.672 66.667 0.00 0.00 0.00 2.93
742 743 2.406002 GAAGGCCTCGTGACCCCAAA 62.406 60.000 5.23 0.00 0.00 3.28
743 744 2.852075 AAGGCCTCGTGACCCCAA 60.852 61.111 5.23 0.00 0.00 4.12
744 745 3.319198 GAAGGCCTCGTGACCCCA 61.319 66.667 5.23 0.00 0.00 4.96
745 746 3.003763 AGAAGGCCTCGTGACCCC 61.004 66.667 5.23 0.00 0.00 4.95
746 747 2.266055 CAGAAGGCCTCGTGACCC 59.734 66.667 5.23 0.00 0.00 4.46
747 748 2.435059 GCAGAAGGCCTCGTGACC 60.435 66.667 16.74 0.00 36.11 4.02
748 749 2.811317 CGCAGAAGGCCTCGTGAC 60.811 66.667 16.74 8.11 40.31 3.67
749 750 4.742201 GCGCAGAAGGCCTCGTGA 62.742 66.667 16.74 0.00 40.31 4.35
777 778 1.648467 GGACAGGCGTTTGGAGCATC 61.648 60.000 0.00 0.00 36.08 3.91
778 779 1.675641 GGACAGGCGTTTGGAGCAT 60.676 57.895 0.00 0.00 36.08 3.79
779 780 2.281484 GGACAGGCGTTTGGAGCA 60.281 61.111 0.00 0.00 36.08 4.26
780 781 3.423154 CGGACAGGCGTTTGGAGC 61.423 66.667 0.00 0.00 0.00 4.70
781 782 3.423154 GCGGACAGGCGTTTGGAG 61.423 66.667 0.00 0.00 0.00 3.86
812 813 4.440829 TTTGGGGAGCGATGGGGC 62.441 66.667 0.00 0.00 0.00 5.80
813 814 2.440247 GTTTGGGGAGCGATGGGG 60.440 66.667 0.00 0.00 0.00 4.96
814 815 2.824041 CGTTTGGGGAGCGATGGG 60.824 66.667 0.00 0.00 33.36 4.00
815 816 2.824041 CCGTTTGGGGAGCGATGG 60.824 66.667 0.00 0.00 33.36 3.51
816 817 2.106683 GTCCGTTTGGGGAGCGATG 61.107 63.158 0.00 0.00 36.58 3.84
817 818 2.119484 TTGTCCGTTTGGGGAGCGAT 62.119 55.000 0.00 0.00 36.58 4.58
818 819 2.326773 TTTGTCCGTTTGGGGAGCGA 62.327 55.000 0.00 0.00 36.58 4.93
819 820 1.448922 TTTTGTCCGTTTGGGGAGCG 61.449 55.000 0.00 0.00 36.58 5.03
820 821 0.313987 CTTTTGTCCGTTTGGGGAGC 59.686 55.000 0.00 0.00 36.58 4.70
821 822 0.313987 GCTTTTGTCCGTTTGGGGAG 59.686 55.000 0.00 0.00 36.58 4.30
822 823 1.448922 CGCTTTTGTCCGTTTGGGGA 61.449 55.000 0.00 0.00 36.01 4.81
823 824 1.007849 CGCTTTTGTCCGTTTGGGG 60.008 57.895 0.00 0.00 36.01 4.96
824 825 0.382515 TTCGCTTTTGTCCGTTTGGG 59.617 50.000 0.00 0.00 35.24 4.12
825 826 1.472990 GTTCGCTTTTGTCCGTTTGG 58.527 50.000 0.00 0.00 0.00 3.28
826 827 1.109296 CGTTCGCTTTTGTCCGTTTG 58.891 50.000 0.00 0.00 0.00 2.93
827 828 0.728542 ACGTTCGCTTTTGTCCGTTT 59.271 45.000 0.00 0.00 0.00 3.60
828 829 0.027063 CACGTTCGCTTTTGTCCGTT 59.973 50.000 0.00 0.00 0.00 4.44
829 830 1.085501 ACACGTTCGCTTTTGTCCGT 61.086 50.000 0.00 0.00 0.00 4.69
830 831 0.382636 GACACGTTCGCTTTTGTCCG 60.383 55.000 0.00 0.00 33.63 4.79
831 832 3.432759 GACACGTTCGCTTTTGTCC 57.567 52.632 0.00 0.00 33.63 4.02
832 833 0.382636 CGGACACGTTCGCTTTTGTC 60.383 55.000 0.00 5.52 38.11 3.18
833 834 1.639534 CGGACACGTTCGCTTTTGT 59.360 52.632 0.00 0.00 34.81 2.83
834 835 1.083015 CCGGACACGTTCGCTTTTG 60.083 57.895 0.00 0.00 38.78 2.44
835 836 0.601841 ATCCGGACACGTTCGCTTTT 60.602 50.000 6.12 0.00 38.78 2.27
836 837 1.005394 ATCCGGACACGTTCGCTTT 60.005 52.632 6.12 0.00 38.78 3.51
837 838 1.736645 CATCCGGACACGTTCGCTT 60.737 57.895 6.12 0.00 38.78 4.68
838 839 2.126071 CATCCGGACACGTTCGCT 60.126 61.111 6.12 0.00 38.78 4.93
839 840 3.186047 CCATCCGGACACGTTCGC 61.186 66.667 6.12 0.00 38.78 4.70
840 841 2.508439 CCCATCCGGACACGTTCG 60.508 66.667 6.12 0.00 38.78 3.95
841 842 2.125269 CCCCATCCGGACACGTTC 60.125 66.667 6.12 0.00 38.78 3.95
842 843 2.522367 AACCCCATCCGGACACGTT 61.522 57.895 6.12 4.06 38.78 3.99
843 844 2.926242 AACCCCATCCGGACACGT 60.926 61.111 6.12 0.00 38.78 4.49
844 845 2.435938 CAACCCCATCCGGACACG 60.436 66.667 6.12 0.00 40.55 4.49
845 846 2.750237 GCAACCCCATCCGGACAC 60.750 66.667 6.12 0.00 0.00 3.67
846 847 4.402528 CGCAACCCCATCCGGACA 62.403 66.667 6.12 0.00 0.00 4.02
857 858 4.025401 CAACTCCACCGCGCAACC 62.025 66.667 8.75 0.00 0.00 3.77
858 859 4.025401 CCAACTCCACCGCGCAAC 62.025 66.667 8.75 0.00 0.00 4.17
862 863 2.869503 ATTAGGCCAACTCCACCGCG 62.870 60.000 5.01 0.00 0.00 6.46
863 864 1.077716 ATTAGGCCAACTCCACCGC 60.078 57.895 5.01 0.00 0.00 5.68
864 865 0.810031 CGATTAGGCCAACTCCACCG 60.810 60.000 5.01 0.00 0.00 4.94
865 866 0.463833 CCGATTAGGCCAACTCCACC 60.464 60.000 5.01 0.00 0.00 4.61
866 867 0.539986 TCCGATTAGGCCAACTCCAC 59.460 55.000 5.01 0.00 40.77 4.02
867 868 0.539986 GTCCGATTAGGCCAACTCCA 59.460 55.000 5.01 0.00 40.77 3.86
868 869 0.529992 CGTCCGATTAGGCCAACTCC 60.530 60.000 5.01 0.00 40.77 3.85
869 870 0.529992 CCGTCCGATTAGGCCAACTC 60.530 60.000 5.01 0.00 40.77 3.01
870 871 1.520666 CCGTCCGATTAGGCCAACT 59.479 57.895 5.01 0.00 40.77 3.16
871 872 1.523032 CCCGTCCGATTAGGCCAAC 60.523 63.158 5.01 0.00 40.77 3.77
872 873 2.737881 CCCCGTCCGATTAGGCCAA 61.738 63.158 5.01 0.00 40.77 4.52
873 874 3.158648 CCCCGTCCGATTAGGCCA 61.159 66.667 5.01 0.00 40.77 5.36
874 875 4.620937 GCCCCGTCCGATTAGGCC 62.621 72.222 0.00 0.00 40.77 5.19
875 876 4.620937 GGCCCCGTCCGATTAGGC 62.621 72.222 0.00 0.00 43.09 3.93
890 891 3.728373 ATCTGTTCCGGTGGGGGC 61.728 66.667 0.00 0.00 36.01 5.80
891 892 2.272146 CATCTGTTCCGGTGGGGG 59.728 66.667 0.00 0.00 36.01 5.40
898 899 0.740868 ATGCACGTCCATCTGTTCCG 60.741 55.000 0.00 0.00 0.00 4.30
902 903 1.746615 GGCATGCACGTCCATCTGT 60.747 57.895 21.36 0.00 0.00 3.41
908 909 1.308069 ACAATCTGGCATGCACGTCC 61.308 55.000 21.36 1.47 0.00 4.79
1038 1043 4.748798 AGTGGGGAGGCTGGGAGG 62.749 72.222 0.00 0.00 0.00 4.30
1040 1045 4.270153 ACAGTGGGGAGGCTGGGA 62.270 66.667 0.00 0.00 0.00 4.37
1072 1082 1.304509 GCTCTCCACTCTGGCTTTGC 61.305 60.000 0.00 0.00 37.47 3.68
1099 1109 6.127591 GGTGCTATACTTCTTGAAGTCTCTCA 60.128 42.308 17.89 10.46 34.37 3.27
1116 1128 0.396556 TGCCACGAGAGGGTGCTATA 60.397 55.000 0.00 0.00 36.59 1.31
1117 1129 1.685765 TGCCACGAGAGGGTGCTAT 60.686 57.895 0.00 0.00 36.59 2.97
1119 1131 4.008933 GTGCCACGAGAGGGTGCT 62.009 66.667 0.00 0.00 36.59 4.40
1196 1208 0.741221 GCCTCTTTTGATCTCGCCGT 60.741 55.000 0.00 0.00 0.00 5.68
1488 1522 4.323477 CCGGCCGGTTTGGTGAGA 62.323 66.667 36.64 0.00 41.21 3.27
1508 1542 2.184631 TCCTCCCCCTCCACCTTCT 61.185 63.158 0.00 0.00 0.00 2.85
1651 1691 3.677648 CCCGGTGGTCGTCTTCGT 61.678 66.667 0.00 0.00 38.33 3.85
1918 1973 3.818787 CGGCCTGTGCTTGATGCC 61.819 66.667 0.00 0.00 42.00 4.40
1953 2011 2.416836 TGTGTAACTAGCTTAGCCAGCG 60.417 50.000 0.00 0.00 46.80 5.18
1985 2058 2.988493 GCCATTTTCGTACTGTACACGA 59.012 45.455 17.35 9.95 45.98 4.35
2017 2093 1.898709 GATTCGCGCGAAGAAACTTTG 59.101 47.619 42.48 7.79 37.56 2.77
2052 2128 2.725450 GATCGAGCGAGCGAGCAG 60.725 66.667 10.07 3.06 45.17 4.24
2059 2135 4.263209 AGCAGCCGATCGAGCGAG 62.263 66.667 26.68 15.65 34.64 5.03
2063 2139 1.659954 GTAGCAGCAGCCGATCGAG 60.660 63.158 18.66 8.00 43.56 4.04
2069 2145 3.193614 CAGCAGTAGCAGCAGCCG 61.194 66.667 0.00 0.00 45.49 5.52
2075 2151 0.928922 CAGAATCGCAGCAGTAGCAG 59.071 55.000 0.00 0.00 45.49 4.24
2076 2152 1.086067 GCAGAATCGCAGCAGTAGCA 61.086 55.000 0.00 0.00 45.49 3.49
2078 2154 1.362768 TTGCAGAATCGCAGCAGTAG 58.637 50.000 0.00 0.00 44.14 2.57
2079 2155 1.733912 CTTTGCAGAATCGCAGCAGTA 59.266 47.619 0.00 0.00 44.14 2.74
2080 2156 0.520404 CTTTGCAGAATCGCAGCAGT 59.480 50.000 0.00 0.00 44.14 4.40
2101 2177 3.889044 GCGCTCGTCGATCCTCCA 61.889 66.667 0.00 0.00 41.67 3.86
2178 2254 5.721960 ACTCCTATCTGTAAAGACCACACAT 59.278 40.000 0.00 0.00 0.00 3.21
2183 2259 4.894114 GCCTACTCCTATCTGTAAAGACCA 59.106 45.833 0.00 0.00 0.00 4.02
2184 2260 4.281435 GGCCTACTCCTATCTGTAAAGACC 59.719 50.000 0.00 0.00 0.00 3.85
2229 2320 1.971167 GATGGTGTTCGCCCAGCAA 60.971 57.895 9.51 0.00 45.03 3.91
2236 2327 1.369625 AAATCCGAGATGGTGTTCGC 58.630 50.000 0.00 0.00 39.52 4.70
2237 2328 3.684788 AGAAAAATCCGAGATGGTGTTCG 59.315 43.478 0.00 0.00 39.52 3.95
2282 2373 3.181489 CCGTACTCCACTTAGGCACTTAG 60.181 52.174 0.00 0.00 41.39 2.18
2284 2375 1.549170 CCGTACTCCACTTAGGCACTT 59.451 52.381 0.00 0.00 41.75 3.16
2285 2376 1.183549 CCGTACTCCACTTAGGCACT 58.816 55.000 0.00 0.00 46.37 4.40
2286 2377 1.135170 GTCCGTACTCCACTTAGGCAC 60.135 57.143 0.00 0.00 37.29 5.01
2287 2378 1.180029 GTCCGTACTCCACTTAGGCA 58.820 55.000 0.00 0.00 37.29 4.75
2288 2379 1.472188 AGTCCGTACTCCACTTAGGC 58.528 55.000 0.00 0.00 37.29 3.93
2289 2380 3.212685 CCTAGTCCGTACTCCACTTAGG 58.787 54.545 0.00 0.00 37.15 2.69
2317 2408 2.139118 GTCGATGCTTAGATGCTTCCC 58.861 52.381 0.00 0.00 34.79 3.97
2329 2425 0.596577 ACCGTATATGCGTCGATGCT 59.403 50.000 28.53 16.92 35.36 3.79
2330 2426 0.708370 CACCGTATATGCGTCGATGC 59.292 55.000 22.77 22.77 0.00 3.91
2331 2427 1.713932 CACACCGTATATGCGTCGATG 59.286 52.381 12.30 0.00 0.00 3.84
2332 2428 1.605232 TCACACCGTATATGCGTCGAT 59.395 47.619 12.30 0.00 0.00 3.59
2333 2429 1.015868 TCACACCGTATATGCGTCGA 58.984 50.000 12.30 0.44 0.00 4.20
2334 2430 1.118033 GTCACACCGTATATGCGTCG 58.882 55.000 12.30 5.15 0.00 5.12
2335 2431 1.850441 GTGTCACACCGTATATGCGTC 59.150 52.381 12.30 0.00 0.00 5.19
2336 2432 1.796253 CGTGTCACACCGTATATGCGT 60.796 52.381 12.30 0.00 0.00 5.24
2387 2484 6.514705 CGCTAGGAAAGGTACTATCACTAACC 60.515 46.154 0.00 0.00 38.49 2.85
2392 2492 4.608951 CACGCTAGGAAAGGTACTATCAC 58.391 47.826 0.00 0.00 38.49 3.06
2454 2558 6.467723 TTGCACGTTCTTTCTATCTTCTTC 57.532 37.500 0.00 0.00 0.00 2.87
2485 2684 4.116961 TCGAGCAAATTATTGTACGGAGG 58.883 43.478 0.00 0.00 38.85 4.30
2503 2702 1.403814 TCTGGGAGCCTTGTATCGAG 58.596 55.000 0.00 0.00 0.00 4.04
2506 2705 3.055094 TGTCTTTCTGGGAGCCTTGTATC 60.055 47.826 0.00 0.00 0.00 2.24
2557 2759 2.152016 GAAGCGGGCTGTAGTTTTCTT 58.848 47.619 0.00 0.00 0.00 2.52
2564 2766 1.808411 TTTTGAGAAGCGGGCTGTAG 58.192 50.000 0.00 0.00 0.00 2.74
2569 2771 1.812571 TCTTGATTTTGAGAAGCGGGC 59.187 47.619 0.00 0.00 0.00 6.13
2592 2794 4.444876 GCTAGGCCCACTAAGATTGATTGA 60.445 45.833 0.00 0.00 0.00 2.57
2602 2804 3.973973 AGATACAATGCTAGGCCCACTAA 59.026 43.478 0.00 0.00 0.00 2.24
2627 2829 2.874780 CGAAGACTTCCGCGACCG 60.875 66.667 8.23 0.00 0.00 4.79
2665 2867 4.207891 ACAAGACTTCTACGATGGCATT 57.792 40.909 0.00 0.00 0.00 3.56
2667 2869 5.826208 TCTATACAAGACTTCTACGATGGCA 59.174 40.000 0.00 0.00 0.00 4.92
2671 2873 7.392113 CCCTGATCTATACAAGACTTCTACGAT 59.608 40.741 0.00 0.00 36.93 3.73
2672 2874 6.711194 CCCTGATCTATACAAGACTTCTACGA 59.289 42.308 0.00 0.00 36.93 3.43
2673 2875 6.711194 TCCCTGATCTATACAAGACTTCTACG 59.289 42.308 0.00 0.00 36.93 3.51
2675 2877 8.448816 TGATCCCTGATCTATACAAGACTTCTA 58.551 37.037 5.74 0.00 39.56 2.10
2676 2878 7.232534 GTGATCCCTGATCTATACAAGACTTCT 59.767 40.741 5.74 0.00 39.56 2.85
2677 2879 7.014711 TGTGATCCCTGATCTATACAAGACTTC 59.985 40.741 5.74 0.00 39.56 3.01
2679 2881 6.377080 TGTGATCCCTGATCTATACAAGACT 58.623 40.000 5.74 0.00 39.56 3.24
2680 2882 6.656632 TGTGATCCCTGATCTATACAAGAC 57.343 41.667 5.74 0.00 39.56 3.01
2681 2883 7.675161 TTTGTGATCCCTGATCTATACAAGA 57.325 36.000 5.74 0.00 39.56 3.02
2682 2884 7.605691 GGATTTGTGATCCCTGATCTATACAAG 59.394 40.741 5.74 0.00 39.56 3.16
2683 2885 7.072328 TGGATTTGTGATCCCTGATCTATACAA 59.928 37.037 5.74 5.35 39.56 2.41
2684 2886 6.558394 TGGATTTGTGATCCCTGATCTATACA 59.442 38.462 5.74 0.00 39.56 2.29
2685 2887 6.876257 GTGGATTTGTGATCCCTGATCTATAC 59.124 42.308 5.74 0.00 39.56 1.47
2686 2888 6.558394 TGTGGATTTGTGATCCCTGATCTATA 59.442 38.462 5.74 0.00 39.56 1.31
2687 2889 5.370584 TGTGGATTTGTGATCCCTGATCTAT 59.629 40.000 5.74 0.00 39.56 1.98
2688 2890 4.721274 TGTGGATTTGTGATCCCTGATCTA 59.279 41.667 5.74 0.00 39.56 1.98
2689 2891 3.524789 TGTGGATTTGTGATCCCTGATCT 59.475 43.478 5.74 0.00 39.56 2.75
2690 2892 3.881688 CTGTGGATTTGTGATCCCTGATC 59.118 47.826 2.81 0.00 39.31 2.92
2691 2893 3.894759 CTGTGGATTTGTGATCCCTGAT 58.105 45.455 2.81 0.00 37.40 2.90
2692 2894 2.618816 GCTGTGGATTTGTGATCCCTGA 60.619 50.000 2.81 0.00 37.40 3.86
2693 2895 1.747355 GCTGTGGATTTGTGATCCCTG 59.253 52.381 2.81 1.02 37.40 4.45
2694 2896 1.355381 TGCTGTGGATTTGTGATCCCT 59.645 47.619 2.81 0.00 37.40 4.20
2695 2897 1.838112 TGCTGTGGATTTGTGATCCC 58.162 50.000 2.81 0.00 37.40 3.85
2696 2898 3.285484 AGATGCTGTGGATTTGTGATCC 58.715 45.455 0.00 0.00 38.66 3.36
2697 2899 3.002042 CGAGATGCTGTGGATTTGTGATC 59.998 47.826 0.00 0.00 0.00 2.92
2698 2900 2.941064 CGAGATGCTGTGGATTTGTGAT 59.059 45.455 0.00 0.00 0.00 3.06
2699 2901 2.349590 CGAGATGCTGTGGATTTGTGA 58.650 47.619 0.00 0.00 0.00 3.58
2700 2902 1.202110 GCGAGATGCTGTGGATTTGTG 60.202 52.381 0.00 0.00 41.73 3.33
2701 2903 1.089920 GCGAGATGCTGTGGATTTGT 58.910 50.000 0.00 0.00 41.73 2.83
2702 2904 0.027194 CGCGAGATGCTGTGGATTTG 59.973 55.000 0.00 0.00 43.27 2.32
2703 2905 0.108186 TCGCGAGATGCTGTGGATTT 60.108 50.000 3.71 0.00 43.27 2.17
2704 2906 0.108186 TTCGCGAGATGCTGTGGATT 60.108 50.000 9.59 0.00 43.27 3.01
2705 2907 0.807667 GTTCGCGAGATGCTGTGGAT 60.808 55.000 9.59 0.00 43.27 3.41
2706 2908 1.446099 GTTCGCGAGATGCTGTGGA 60.446 57.895 9.59 0.00 43.27 4.02
2707 2909 0.179137 TAGTTCGCGAGATGCTGTGG 60.179 55.000 9.59 0.00 43.27 4.17
2708 2910 1.629013 TTAGTTCGCGAGATGCTGTG 58.371 50.000 9.59 0.00 43.27 3.66
2709 2911 2.363788 TTTAGTTCGCGAGATGCTGT 57.636 45.000 9.59 0.00 43.27 4.40
2710 2912 3.933155 AATTTAGTTCGCGAGATGCTG 57.067 42.857 9.59 0.00 43.27 4.41
2711 2913 4.033358 CAGAAATTTAGTTCGCGAGATGCT 59.967 41.667 9.59 9.19 43.27 3.79
2712 2914 4.266945 CAGAAATTTAGTTCGCGAGATGC 58.733 43.478 9.59 1.21 41.60 3.91
2713 2915 4.266945 GCAGAAATTTAGTTCGCGAGATG 58.733 43.478 9.59 0.00 41.60 2.90
2714 2916 3.309954 GGCAGAAATTTAGTTCGCGAGAT 59.690 43.478 9.59 4.45 41.60 2.75
2715 2917 2.671396 GGCAGAAATTTAGTTCGCGAGA 59.329 45.455 9.59 0.00 39.20 4.04
2716 2918 2.415168 TGGCAGAAATTTAGTTCGCGAG 59.585 45.455 9.59 0.00 31.89 5.03
2717 2919 2.158841 GTGGCAGAAATTTAGTTCGCGA 59.841 45.455 3.71 3.71 31.89 5.87
2718 2920 2.159627 AGTGGCAGAAATTTAGTTCGCG 59.840 45.455 0.00 0.00 31.89 5.87
2719 2921 3.831715 AGTGGCAGAAATTTAGTTCGC 57.168 42.857 0.00 0.00 32.50 4.70
2720 2922 5.107875 GCAAAAGTGGCAGAAATTTAGTTCG 60.108 40.000 0.00 0.00 32.50 3.95
2721 2923 5.752955 TGCAAAAGTGGCAGAAATTTAGTTC 59.247 36.000 0.00 0.00 36.11 3.01
2722 2924 5.669477 TGCAAAAGTGGCAGAAATTTAGTT 58.331 33.333 0.00 0.00 36.11 2.24
2723 2925 5.275067 TGCAAAAGTGGCAGAAATTTAGT 57.725 34.783 0.00 0.00 36.11 2.24
2724 2926 5.332506 CGTTGCAAAAGTGGCAGAAATTTAG 60.333 40.000 0.00 0.00 43.05 1.85
2725 2927 4.505922 CGTTGCAAAAGTGGCAGAAATTTA 59.494 37.500 0.00 0.00 43.05 1.40
2726 2928 3.309410 CGTTGCAAAAGTGGCAGAAATTT 59.691 39.130 0.00 0.00 43.05 1.82
2727 2929 2.865551 CGTTGCAAAAGTGGCAGAAATT 59.134 40.909 0.00 0.00 43.05 1.82
2728 2930 2.472816 CGTTGCAAAAGTGGCAGAAAT 58.527 42.857 0.00 0.00 43.05 2.17
2729 2931 1.470632 CCGTTGCAAAAGTGGCAGAAA 60.471 47.619 0.00 0.00 43.05 2.52
2730 2932 0.102120 CCGTTGCAAAAGTGGCAGAA 59.898 50.000 0.00 0.00 43.05 3.02
2731 2933 1.732917 CCGTTGCAAAAGTGGCAGA 59.267 52.632 0.00 0.00 43.05 4.26
2732 2934 1.950630 GCCGTTGCAAAAGTGGCAG 60.951 57.895 21.58 1.70 43.05 4.85
2733 2935 2.105930 GCCGTTGCAAAAGTGGCA 59.894 55.556 21.58 0.00 39.73 4.92
2734 2936 3.029735 CGCCGTTGCAAAAGTGGC 61.030 61.111 18.32 18.32 37.47 5.01
2735 2937 1.657181 GTCGCCGTTGCAAAAGTGG 60.657 57.895 0.00 2.03 37.32 4.00
2736 2938 2.003443 CGTCGCCGTTGCAAAAGTG 61.003 57.895 0.00 2.04 37.32 3.16
2737 2939 2.326550 CGTCGCCGTTGCAAAAGT 59.673 55.556 0.00 0.00 37.32 2.66
2747 2949 1.994779 ACAAGGTTATTTACGTCGCCG 59.005 47.619 0.00 0.00 40.83 6.46
2748 2950 3.739494 CAACAAGGTTATTTACGTCGCC 58.261 45.455 0.00 0.00 0.00 5.54
2749 2951 3.158268 GCAACAAGGTTATTTACGTCGC 58.842 45.455 0.00 0.00 0.00 5.19
2750 2952 3.121611 TCGCAACAAGGTTATTTACGTCG 59.878 43.478 0.00 0.00 0.00 5.12
2751 2953 4.388790 GTCGCAACAAGGTTATTTACGTC 58.611 43.478 0.00 0.00 0.00 4.34
2752 2954 3.120923 CGTCGCAACAAGGTTATTTACGT 60.121 43.478 0.00 0.00 0.00 3.57
2753 2955 3.121611 TCGTCGCAACAAGGTTATTTACG 59.878 43.478 0.00 0.00 0.00 3.18
2754 2956 4.435121 CCTCGTCGCAACAAGGTTATTTAC 60.435 45.833 0.00 0.00 0.00 2.01
2755 2957 3.680937 CCTCGTCGCAACAAGGTTATTTA 59.319 43.478 0.00 0.00 0.00 1.40
2756 2958 2.482721 CCTCGTCGCAACAAGGTTATTT 59.517 45.455 0.00 0.00 0.00 1.40
2757 2959 2.073816 CCTCGTCGCAACAAGGTTATT 58.926 47.619 0.00 0.00 0.00 1.40
2758 2960 1.274167 TCCTCGTCGCAACAAGGTTAT 59.726 47.619 0.00 0.00 0.00 1.89
2759 2961 0.675083 TCCTCGTCGCAACAAGGTTA 59.325 50.000 0.00 0.00 0.00 2.85
2760 2962 0.600255 CTCCTCGTCGCAACAAGGTT 60.600 55.000 0.00 0.00 0.00 3.50
2761 2963 1.006102 CTCCTCGTCGCAACAAGGT 60.006 57.895 0.00 0.00 0.00 3.50
2762 2964 0.734253 CTCTCCTCGTCGCAACAAGG 60.734 60.000 0.00 0.00 0.00 3.61
2763 2965 0.241213 TCTCTCCTCGTCGCAACAAG 59.759 55.000 0.00 0.00 0.00 3.16
2764 2966 0.241213 CTCTCTCCTCGTCGCAACAA 59.759 55.000 0.00 0.00 0.00 2.83
2765 2967 1.876664 CTCTCTCCTCGTCGCAACA 59.123 57.895 0.00 0.00 0.00 3.33
2766 2968 1.515304 GCTCTCTCCTCGTCGCAAC 60.515 63.158 0.00 0.00 0.00 4.17
2767 2969 1.315981 ATGCTCTCTCCTCGTCGCAA 61.316 55.000 0.00 0.00 0.00 4.85
2768 2970 1.750780 ATGCTCTCTCCTCGTCGCA 60.751 57.895 0.00 0.00 0.00 5.10
2769 2971 1.299014 CATGCTCTCTCCTCGTCGC 60.299 63.158 0.00 0.00 0.00 5.19
2770 2972 0.735471 TTCATGCTCTCTCCTCGTCG 59.265 55.000 0.00 0.00 0.00 5.12
2771 2973 1.202359 GGTTCATGCTCTCTCCTCGTC 60.202 57.143 0.00 0.00 0.00 4.20
2772 2974 0.820871 GGTTCATGCTCTCTCCTCGT 59.179 55.000 0.00 0.00 0.00 4.18
2773 2975 0.248825 CGGTTCATGCTCTCTCCTCG 60.249 60.000 0.00 0.00 0.00 4.63
2774 2976 0.529555 GCGGTTCATGCTCTCTCCTC 60.530 60.000 0.00 0.00 0.00 3.71
2775 2977 0.975040 AGCGGTTCATGCTCTCTCCT 60.975 55.000 0.00 0.00 38.62 3.69
2776 2978 0.809241 CAGCGGTTCATGCTCTCTCC 60.809 60.000 0.00 0.00 41.72 3.71
2777 2979 0.809241 CCAGCGGTTCATGCTCTCTC 60.809 60.000 0.00 0.00 41.72 3.20
2778 2980 1.220206 CCAGCGGTTCATGCTCTCT 59.780 57.895 0.00 0.00 41.72 3.10
2779 2981 0.809241 CTCCAGCGGTTCATGCTCTC 60.809 60.000 0.00 0.00 41.72 3.20
2780 2982 1.220206 CTCCAGCGGTTCATGCTCT 59.780 57.895 0.00 0.00 41.72 4.09
2781 2983 0.809241 CTCTCCAGCGGTTCATGCTC 60.809 60.000 0.00 0.00 41.72 4.26
2782 2984 1.220206 CTCTCCAGCGGTTCATGCT 59.780 57.895 0.00 0.00 45.31 3.79
2783 2985 2.467826 GCTCTCCAGCGGTTCATGC 61.468 63.158 0.00 0.00 35.39 4.06
2784 2986 3.805267 GCTCTCCAGCGGTTCATG 58.195 61.111 0.00 0.00 35.39 3.07
2792 2994 0.948141 GGTGCATATCGCTCTCCAGC 60.948 60.000 0.00 0.00 43.06 4.85
2845 3047 2.529780 TTGGATGTTTTTGCAGCTGG 57.470 45.000 17.12 0.00 0.00 4.85
2850 3052 4.478206 TGTTCCTTTGGATGTTTTTGCA 57.522 36.364 0.00 0.00 0.00 4.08
2863 3065 4.026052 GGGGATCAATGTGATGTTCCTTT 58.974 43.478 0.00 0.00 37.20 3.11
2865 3067 2.582172 TGGGGATCAATGTGATGTTCCT 59.418 45.455 0.00 0.00 37.20 3.36
2899 3101 4.700365 CAGTGGCGTCGACAGCGA 62.700 66.667 17.16 13.90 45.71 4.93
2916 3118 2.690653 TAGTGGTGTTGTGGGCAGCC 62.691 60.000 1.26 1.26 33.85 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.