Multiple sequence alignment - TraesCS2B01G121100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G121100 chr2B 100.000 4319 0 0 1 4319 88838253 88842571 0.000000e+00 7976.0
1 TraesCS2B01G121100 chr2A 94.221 3599 141 32 1 3576 57546265 57549819 0.000000e+00 5432.0
2 TraesCS2B01G121100 chr2A 92.000 150 12 0 1 150 775685927 775685778 1.220000e-50 211.0
3 TraesCS2B01G121100 chr2A 90.000 150 11 1 1 150 775736721 775736866 1.590000e-44 191.0
4 TraesCS2B01G121100 chr2A 93.750 48 3 0 355 402 775685778 775685731 5.990000e-09 73.1
5 TraesCS2B01G121100 chr2A 92.157 51 4 0 349 399 775736860 775736910 5.990000e-09 73.1
6 TraesCS2B01G121100 chr2D 94.928 3174 120 20 654 3812 56104466 56107613 0.000000e+00 4931.0
7 TraesCS2B01G121100 chr2D 96.693 635 20 1 1 635 56103840 56104473 0.000000e+00 1055.0
8 TraesCS2B01G121100 chr5B 96.610 413 11 2 3905 4317 388610997 388611406 0.000000e+00 682.0
9 TraesCS2B01G121100 chr5B 94.000 150 9 0 1 150 21726273 21726124 1.210000e-55 228.0
10 TraesCS2B01G121100 chr5B 92.667 150 11 0 1 150 508017187 508017336 2.620000e-52 217.0
11 TraesCS2B01G121100 chr5B 77.174 184 42 0 3058 3241 243361518 243361701 1.640000e-19 108.0
12 TraesCS2B01G121100 chr5B 92.157 51 4 0 349 399 508017330 508017380 5.990000e-09 73.1
13 TraesCS2B01G121100 chr5B 95.349 43 2 0 355 397 21726124 21726082 7.750000e-08 69.4
14 TraesCS2B01G121100 chr4B 75.634 1301 271 30 1008 2288 375139456 375138182 4.780000e-169 604.0
15 TraesCS2B01G121100 chr4B 76.596 470 103 7 3851 4317 472386126 472386591 7.170000e-63 252.0
16 TraesCS2B01G121100 chr4D 75.984 1220 254 25 1087 2288 301301373 301300175 1.030000e-165 593.0
17 TraesCS2B01G121100 chr4A 75.552 1268 267 28 1041 2288 180396031 180397275 6.220000e-163 584.0
18 TraesCS2B01G121100 chr3D 88.627 466 52 1 3853 4317 555789032 555789497 2.250000e-157 566.0
19 TraesCS2B01G121100 chr3D 85.135 74 11 0 3055 3128 506715245 506715318 4.630000e-10 76.8
20 TraesCS2B01G121100 chr7A 93.333 150 10 0 1 150 709847525 709847674 5.620000e-54 222.0
21 TraesCS2B01G121100 chr7A 92.157 51 4 0 349 399 709847668 709847718 5.990000e-09 73.1
22 TraesCS2B01G121100 chr5A 93.333 150 10 0 1 150 633001505 633001654 5.620000e-54 222.0
23 TraesCS2B01G121100 chr5A 90.196 51 5 0 349 399 633001648 633001698 2.790000e-07 67.6
24 TraesCS2B01G121100 chr3B 78.716 296 60 1 2963 3255 587568059 587568354 1.230000e-45 195.0
25 TraesCS2B01G121100 chr5D 95.181 83 4 0 4230 4312 443006517 443006435 9.750000e-27 132.0
26 TraesCS2B01G121100 chr5D 77.717 184 41 0 3058 3241 220462830 220463013 3.530000e-21 113.0
27 TraesCS2B01G121100 chr3A 85.135 74 11 0 3055 3128 644940124 644940197 4.630000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G121100 chr2B 88838253 88842571 4318 False 7976 7976 100.0000 1 4319 1 chr2B.!!$F1 4318
1 TraesCS2B01G121100 chr2A 57546265 57549819 3554 False 5432 5432 94.2210 1 3576 1 chr2A.!!$F1 3575
2 TraesCS2B01G121100 chr2D 56103840 56107613 3773 False 2993 4931 95.8105 1 3812 2 chr2D.!!$F1 3811
3 TraesCS2B01G121100 chr4B 375138182 375139456 1274 True 604 604 75.6340 1008 2288 1 chr4B.!!$R1 1280
4 TraesCS2B01G121100 chr4D 301300175 301301373 1198 True 593 593 75.9840 1087 2288 1 chr4D.!!$R1 1201
5 TraesCS2B01G121100 chr4A 180396031 180397275 1244 False 584 584 75.5520 1041 2288 1 chr4A.!!$F1 1247

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
433 440 1.548973 CTCGACTGCGTGTGTGTTCC 61.549 60.000 0.00 0.0 38.98 3.62 F
1085 1094 1.284785 CTTATTCAACCCCCTGGCAGA 59.715 52.381 17.94 0.0 33.59 4.26 F
2386 2413 0.033781 GGCCAACATTGCTTGCTCAA 59.966 50.000 0.00 0.0 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 1749 1.156645 GCACAGGCGATGGAGATGAC 61.157 60.0 0.0 0.0 0.0 3.06 R
2960 2997 0.039798 GTACACGTCCGACTTCTGCA 60.040 55.0 0.0 0.0 0.0 4.41 R
3905 3954 0.038166 TCCCAGCTTAGCCCAAACTG 59.962 55.0 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
154 160 6.156748 TGAGCTTCAGTAGTTTGTCAACTA 57.843 37.500 0.00 0.00 41.81 2.24
236 242 7.285401 TCAGCTTTGTTCCTGTTATTCTCTTTT 59.715 33.333 0.00 0.00 0.00 2.27
340 346 2.758009 TGCTTTCTGCCTGCAATTTTC 58.242 42.857 0.00 0.00 42.00 2.29
387 393 2.478335 TAAAGGGCGCCAAGGTGGAG 62.478 60.000 30.85 0.00 40.96 3.86
399 405 1.821088 AGGTGGAGTTTCTGTCCCTT 58.179 50.000 0.00 0.00 32.49 3.95
429 436 2.023771 ATGCTCGACTGCGTGTGTG 61.024 57.895 0.00 0.00 38.98 3.82
433 440 1.548973 CTCGACTGCGTGTGTGTTCC 61.549 60.000 0.00 0.00 38.98 3.62
448 455 5.303333 TGTGTGTTCCTACATTGTCACTAGA 59.697 40.000 0.00 0.00 36.50 2.43
477 484 2.365941 GGCCTCCTGTGAATAGGTAGTC 59.634 54.545 0.00 0.00 38.99 2.59
518 525 2.307768 GGTCCATACTGACCGATCTCA 58.692 52.381 0.00 0.00 44.98 3.27
536 543 2.499205 CAGGATAACCGCCTGCGA 59.501 61.111 13.94 0.00 45.66 5.10
660 667 8.818141 TCTCAGTTACTTTGTATTCTGACTTG 57.182 34.615 0.00 0.00 0.00 3.16
697 704 3.735237 TCCTGTTGAGTGAGTCACTTC 57.265 47.619 26.14 18.49 45.44 3.01
710 717 5.357032 GTGAGTCACTTCCTGGAAAAGAAAA 59.643 40.000 16.26 0.00 0.00 2.29
755 762 3.955771 TCATGCGTGATTCACATGATG 57.044 42.857 16.61 13.37 43.85 3.07
861 869 4.292977 ACTGTTCTTGTTTTGCAGCTAC 57.707 40.909 0.00 0.00 0.00 3.58
863 871 4.339247 ACTGTTCTTGTTTTGCAGCTACAT 59.661 37.500 0.00 0.00 0.00 2.29
867 875 6.593382 TGTTCTTGTTTTGCAGCTACATTTTT 59.407 30.769 0.00 0.00 0.00 1.94
880 888 7.573096 GCAGCTACATTTTTAAGCTTAGTGTCA 60.573 37.037 6.24 0.00 43.97 3.58
889 897 4.543590 AAGCTTAGTGTCAGTATGCTGT 57.456 40.909 22.27 13.10 43.05 4.40
892 900 5.308825 AGCTTAGTGTCAGTATGCTGTTTT 58.691 37.500 21.36 3.75 43.05 2.43
893 901 5.765182 AGCTTAGTGTCAGTATGCTGTTTTT 59.235 36.000 21.36 3.18 43.05 1.94
923 931 7.776030 TCCTCACTAAATGTCCACTTTTGTTTA 59.224 33.333 1.78 0.00 0.00 2.01
924 932 7.860872 CCTCACTAAATGTCCACTTTTGTTTAC 59.139 37.037 1.78 0.00 0.00 2.01
945 954 2.293399 CCAGGTTTGGTTACTTGTCTGC 59.707 50.000 0.00 0.00 39.79 4.26
1077 1086 8.630037 CATTTGTTACTATCCTTATTCAACCCC 58.370 37.037 0.00 0.00 0.00 4.95
1085 1094 1.284785 CTTATTCAACCCCCTGGCAGA 59.715 52.381 17.94 0.00 33.59 4.26
1098 1107 2.684843 GGCAGAAGCAGACTTGGCG 61.685 63.158 0.00 0.00 44.61 5.69
1237 1246 3.131933 GTCACACATATCTGAGCTGAGGT 59.868 47.826 0.00 0.00 0.00 3.85
1239 1248 3.869832 CACACATATCTGAGCTGAGGTTG 59.130 47.826 0.00 0.00 0.00 3.77
1261 1270 2.268920 GTGCTGGGCTCATCGGAA 59.731 61.111 0.00 0.00 0.00 4.30
1275 1284 2.961531 TCGGAACAATCCCTCCAAAA 57.038 45.000 0.00 0.00 43.37 2.44
1279 1288 4.076394 CGGAACAATCCCTCCAAAAACTA 58.924 43.478 0.00 0.00 43.37 2.24
1371 1380 1.882623 GTGGCCTCACTTCCTTCTTTG 59.117 52.381 3.32 0.00 40.58 2.77
1377 1386 1.864711 TCACTTCCTTCTTTGCGTTCG 59.135 47.619 0.00 0.00 0.00 3.95
1411 1420 4.762251 AGCACAATAAACTTTCAGGAGGTC 59.238 41.667 0.00 0.00 0.00 3.85
1547 1556 5.377478 ACAAGAAAATTCTCTTTCCGGACT 58.623 37.500 1.83 0.00 36.28 3.85
1740 1749 1.068333 CCAGAATTGCCTTCAACACCG 60.068 52.381 0.00 0.00 36.24 4.94
2022 2049 6.497259 ACAACTTTGACTTGGAGGATCTACTA 59.503 38.462 0.00 0.00 33.73 1.82
2379 2406 0.763986 ACAAAGGGGCCAACATTGCT 60.764 50.000 4.39 0.00 0.00 3.91
2380 2407 0.397564 CAAAGGGGCCAACATTGCTT 59.602 50.000 4.39 0.00 0.00 3.91
2381 2408 0.397564 AAAGGGGCCAACATTGCTTG 59.602 50.000 4.39 0.00 0.00 4.01
2382 2409 2.046988 GGGGCCAACATTGCTTGC 60.047 61.111 4.39 0.00 0.00 4.01
2383 2410 2.586293 GGGGCCAACATTGCTTGCT 61.586 57.895 4.39 0.00 0.00 3.91
2384 2411 1.079612 GGGCCAACATTGCTTGCTC 60.080 57.895 4.39 0.00 0.00 4.26
2385 2412 1.667151 GGCCAACATTGCTTGCTCA 59.333 52.632 0.00 0.00 0.00 4.26
2386 2413 0.033781 GGCCAACATTGCTTGCTCAA 59.966 50.000 0.00 0.00 0.00 3.02
2387 2414 1.425412 GCCAACATTGCTTGCTCAAG 58.575 50.000 5.31 5.31 41.24 3.02
2388 2415 1.269936 GCCAACATTGCTTGCTCAAGT 60.270 47.619 10.86 0.00 40.45 3.16
2389 2416 2.030007 GCCAACATTGCTTGCTCAAGTA 60.030 45.455 10.86 4.07 40.45 2.24
2390 2417 3.829948 CCAACATTGCTTGCTCAAGTAG 58.170 45.455 10.86 0.00 40.45 2.57
2403 2430 4.570772 TGCTCAAGTAGTCAAGTGTCAAAC 59.429 41.667 0.00 0.00 0.00 2.93
2460 2488 5.323581 TGCTATATCCATGCCATGCTTAAA 58.676 37.500 0.00 0.00 0.00 1.52
2473 2507 6.376864 TGCCATGCTTAAAAAGTTAGCATCTA 59.623 34.615 7.71 0.00 43.32 1.98
2475 2509 7.433425 GCCATGCTTAAAAAGTTAGCATCTAAG 59.567 37.037 7.71 0.00 43.32 2.18
2560 2594 6.422333 TGGACATATTTCTGCACATTTCCTA 58.578 36.000 0.00 0.00 0.00 2.94
2573 2607 2.949177 TTTCCTACCTGAAGCTGCAA 57.051 45.000 1.02 0.00 0.00 4.08
2582 2616 3.057033 ACCTGAAGCTGCAATGATTGTTC 60.057 43.478 7.05 3.49 0.00 3.18
2592 2629 8.404000 AGCTGCAATGATTGTTCTTTTCTATAG 58.596 33.333 7.05 0.00 0.00 1.31
2850 2887 2.418746 CCTCGTCGGTCAGGATCAAAAT 60.419 50.000 0.00 0.00 30.32 1.82
2895 2932 1.140589 CTCTCTGATGAACGCGCCT 59.859 57.895 5.73 0.00 0.00 5.52
2960 2997 1.115467 ATCGAGAACCGGAAGAGCAT 58.885 50.000 9.46 0.00 39.14 3.79
2995 3032 1.677966 TACTGCTTCGGCGTCCTCT 60.678 57.895 6.85 0.00 45.37 3.69
3332 3369 0.323957 GTCTAGGCCGTTGTTCCCTT 59.676 55.000 0.00 0.00 0.00 3.95
3418 3459 1.077212 ATGGCTGACATCAGGTGCC 60.077 57.895 10.81 7.27 43.94 5.01
3431 3472 1.380302 GGTGCCACCTCACTGGATT 59.620 57.895 6.63 0.00 39.71 3.01
3530 3572 2.854963 TGCTGTGCTGAATCTTCTTGT 58.145 42.857 0.00 0.00 0.00 3.16
3557 3606 4.503314 GCGGCATGGCTGGCTTTC 62.503 66.667 18.09 0.00 45.42 2.62
3576 3625 1.114722 CCCTTTCAGGCCAGCAAACA 61.115 55.000 5.01 0.00 32.73 2.83
3695 3744 2.011548 GCCGGTGTCTGATTGTATGCA 61.012 52.381 1.90 0.00 0.00 3.96
3696 3745 1.665679 CCGGTGTCTGATTGTATGCAC 59.334 52.381 0.00 0.00 0.00 4.57
3705 3754 3.925379 TGATTGTATGCACACTCGAAGT 58.075 40.909 0.00 0.00 37.20 3.01
3755 3804 2.345760 GGACGGCGTAGGGTTCTCA 61.346 63.158 14.74 0.00 0.00 3.27
3761 3810 1.117150 GCGTAGGGTTCTCATGGGTA 58.883 55.000 0.00 0.00 0.00 3.69
3762 3811 1.692519 GCGTAGGGTTCTCATGGGTAT 59.307 52.381 0.00 0.00 0.00 2.73
3767 3816 4.891992 AGGGTTCTCATGGGTATATTCG 57.108 45.455 0.00 0.00 0.00 3.34
3839 3888 2.125512 GCTGGTGGAGCGTTCGAT 60.126 61.111 0.00 0.00 38.15 3.59
3840 3889 2.456119 GCTGGTGGAGCGTTCGATG 61.456 63.158 0.00 0.00 38.15 3.84
3841 3890 1.811266 CTGGTGGAGCGTTCGATGG 60.811 63.158 0.00 0.00 0.00 3.51
3842 3891 2.511600 GGTGGAGCGTTCGATGGG 60.512 66.667 0.00 0.00 0.00 4.00
3843 3892 2.577059 GTGGAGCGTTCGATGGGA 59.423 61.111 0.00 0.00 0.00 4.37
3844 3893 1.144057 GTGGAGCGTTCGATGGGAT 59.856 57.895 0.00 0.00 0.00 3.85
3845 3894 0.462047 GTGGAGCGTTCGATGGGATT 60.462 55.000 0.00 0.00 0.00 3.01
3846 3895 0.251916 TGGAGCGTTCGATGGGATTT 59.748 50.000 0.00 0.00 0.00 2.17
3847 3896 1.339631 TGGAGCGTTCGATGGGATTTT 60.340 47.619 0.00 0.00 0.00 1.82
3848 3897 1.743394 GGAGCGTTCGATGGGATTTTT 59.257 47.619 0.00 0.00 0.00 1.94
3849 3898 2.477863 GGAGCGTTCGATGGGATTTTTG 60.478 50.000 0.00 0.00 0.00 2.44
3850 3899 2.159382 AGCGTTCGATGGGATTTTTGT 58.841 42.857 0.00 0.00 0.00 2.83
3851 3900 2.556622 AGCGTTCGATGGGATTTTTGTT 59.443 40.909 0.00 0.00 0.00 2.83
3852 3901 2.914838 GCGTTCGATGGGATTTTTGTTC 59.085 45.455 0.00 0.00 0.00 3.18
3853 3902 3.498082 CGTTCGATGGGATTTTTGTTCC 58.502 45.455 0.00 0.00 0.00 3.62
3859 3908 3.812577 GGATTTTTGTTCCCAGCGG 57.187 52.632 0.00 0.00 0.00 5.52
3860 3909 0.966179 GGATTTTTGTTCCCAGCGGT 59.034 50.000 0.00 0.00 0.00 5.68
3861 3910 1.336795 GGATTTTTGTTCCCAGCGGTG 60.337 52.381 7.86 7.86 0.00 4.94
3862 3911 0.678950 ATTTTTGTTCCCAGCGGTGG 59.321 50.000 26.78 26.78 44.56 4.61
3871 3920 2.568090 CAGCGGTGGAAACCATGC 59.432 61.111 6.74 0.00 37.80 4.06
3872 3921 2.115052 AGCGGTGGAAACCATGCA 59.885 55.556 16.05 0.00 39.25 3.96
3873 3922 1.304381 AGCGGTGGAAACCATGCAT 60.304 52.632 16.05 0.00 39.25 3.96
3874 3923 1.139520 GCGGTGGAAACCATGCATC 59.860 57.895 0.00 0.00 37.58 3.91
3875 3924 1.594194 GCGGTGGAAACCATGCATCA 61.594 55.000 0.00 0.00 37.58 3.07
3876 3925 1.105457 CGGTGGAAACCATGCATCAT 58.895 50.000 0.00 0.00 35.28 2.45
3877 3926 2.296792 CGGTGGAAACCATGCATCATA 58.703 47.619 0.00 0.00 35.28 2.15
3878 3927 2.886523 CGGTGGAAACCATGCATCATAT 59.113 45.455 0.00 0.00 35.28 1.78
3879 3928 3.318839 CGGTGGAAACCATGCATCATATT 59.681 43.478 0.00 0.00 35.28 1.28
3880 3929 4.557296 CGGTGGAAACCATGCATCATATTC 60.557 45.833 0.00 0.00 35.28 1.75
3881 3930 4.586001 GGTGGAAACCATGCATCATATTCT 59.414 41.667 0.00 0.00 35.28 2.40
3882 3931 5.278660 GGTGGAAACCATGCATCATATTCTC 60.279 44.000 0.00 0.00 35.28 2.87
3883 3932 4.828939 TGGAAACCATGCATCATATTCTCC 59.171 41.667 0.00 0.00 0.00 3.71
3884 3933 5.075493 GGAAACCATGCATCATATTCTCCT 58.925 41.667 0.00 0.00 0.00 3.69
3885 3934 5.048224 GGAAACCATGCATCATATTCTCCTG 60.048 44.000 0.00 0.00 0.00 3.86
3886 3935 3.418995 ACCATGCATCATATTCTCCTGC 58.581 45.455 0.00 0.00 0.00 4.85
3887 3936 2.418976 CCATGCATCATATTCTCCTGCG 59.581 50.000 0.00 0.00 35.63 5.18
3888 3937 3.332034 CATGCATCATATTCTCCTGCGA 58.668 45.455 0.00 0.00 35.63 5.10
3889 3938 3.690475 TGCATCATATTCTCCTGCGAT 57.310 42.857 0.00 0.00 35.63 4.58
3890 3939 3.332034 TGCATCATATTCTCCTGCGATG 58.668 45.455 0.00 0.00 35.63 3.84
3891 3940 2.095532 GCATCATATTCTCCTGCGATGC 59.904 50.000 6.44 6.44 46.06 3.91
3892 3941 2.462456 TCATATTCTCCTGCGATGCC 57.538 50.000 0.00 0.00 0.00 4.40
3893 3942 1.073964 CATATTCTCCTGCGATGCCG 58.926 55.000 0.00 0.00 39.16 5.69
3894 3943 0.681733 ATATTCTCCTGCGATGCCGT 59.318 50.000 0.00 0.00 38.24 5.68
3895 3944 0.464036 TATTCTCCTGCGATGCCGTT 59.536 50.000 0.00 0.00 38.24 4.44
3896 3945 0.392998 ATTCTCCTGCGATGCCGTTT 60.393 50.000 0.00 0.00 38.24 3.60
3897 3946 1.298157 TTCTCCTGCGATGCCGTTTG 61.298 55.000 0.00 0.00 38.24 2.93
3898 3947 2.745884 TCCTGCGATGCCGTTTGG 60.746 61.111 0.00 0.00 38.24 3.28
3908 3957 4.974721 CCGTTTGGCTGGGGCAGT 62.975 66.667 0.00 0.00 39.75 4.40
3909 3958 2.912025 CGTTTGGCTGGGGCAGTT 60.912 61.111 0.00 0.00 39.75 3.16
3910 3959 2.498056 CGTTTGGCTGGGGCAGTTT 61.498 57.895 0.00 0.00 39.75 2.66
3911 3960 1.069596 GTTTGGCTGGGGCAGTTTG 59.930 57.895 0.00 0.00 39.75 2.93
3912 3961 2.139484 TTTGGCTGGGGCAGTTTGG 61.139 57.895 0.00 0.00 39.75 3.28
3913 3962 4.619320 TGGCTGGGGCAGTTTGGG 62.619 66.667 0.00 0.00 40.87 4.12
3916 3965 2.763215 CTGGGGCAGTTTGGGCTA 59.237 61.111 0.00 0.00 0.00 3.93
3917 3966 1.076549 CTGGGGCAGTTTGGGCTAA 59.923 57.895 0.00 0.00 0.00 3.09
3918 3967 0.967380 CTGGGGCAGTTTGGGCTAAG 60.967 60.000 0.00 0.00 0.00 2.18
3919 3968 2.351244 GGGGCAGTTTGGGCTAAGC 61.351 63.158 0.00 0.00 0.00 3.09
3920 3969 1.304464 GGGCAGTTTGGGCTAAGCT 60.304 57.895 0.00 0.00 0.00 3.74
3921 3970 1.598701 GGGCAGTTTGGGCTAAGCTG 61.599 60.000 20.36 20.36 46.68 4.24
3922 3971 1.598701 GGCAGTTTGGGCTAAGCTGG 61.599 60.000 24.38 10.03 44.83 4.85
3923 3972 1.598701 GCAGTTTGGGCTAAGCTGGG 61.599 60.000 24.38 5.22 44.83 4.45
3924 3973 0.038166 CAGTTTGGGCTAAGCTGGGA 59.962 55.000 17.63 0.00 42.07 4.37
3925 3974 0.038310 AGTTTGGGCTAAGCTGGGAC 59.962 55.000 0.00 0.00 0.00 4.46
3926 3975 0.038310 GTTTGGGCTAAGCTGGGACT 59.962 55.000 0.00 0.00 0.00 3.85
3927 3976 0.777446 TTTGGGCTAAGCTGGGACTT 59.223 50.000 0.00 0.00 0.00 3.01
3928 3977 0.328258 TTGGGCTAAGCTGGGACTTC 59.672 55.000 0.00 0.00 0.00 3.01
3929 3978 0.840288 TGGGCTAAGCTGGGACTTCA 60.840 55.000 0.00 0.00 0.00 3.02
3930 3979 0.393132 GGGCTAAGCTGGGACTTCAC 60.393 60.000 0.00 0.00 0.00 3.18
3931 3980 0.393132 GGCTAAGCTGGGACTTCACC 60.393 60.000 0.00 0.00 0.00 4.02
3932 3981 0.324943 GCTAAGCTGGGACTTCACCA 59.675 55.000 0.00 0.00 36.38 4.17
3938 3987 1.754745 TGGGACTTCACCAGACAGC 59.245 57.895 0.00 0.00 33.23 4.40
3939 3988 1.053835 TGGGACTTCACCAGACAGCA 61.054 55.000 0.00 0.00 33.23 4.41
3940 3989 0.321122 GGGACTTCACCAGACAGCAG 60.321 60.000 0.00 0.00 0.00 4.24
3941 3990 0.394565 GGACTTCACCAGACAGCAGT 59.605 55.000 0.00 0.00 0.00 4.40
3942 3991 1.618837 GGACTTCACCAGACAGCAGTA 59.381 52.381 0.00 0.00 0.00 2.74
3943 3992 2.234908 GGACTTCACCAGACAGCAGTAT 59.765 50.000 0.00 0.00 0.00 2.12
3944 3993 3.516615 GACTTCACCAGACAGCAGTATC 58.483 50.000 0.00 0.00 0.00 2.24
3945 3994 3.169099 ACTTCACCAGACAGCAGTATCT 58.831 45.455 0.00 0.00 0.00 1.98
3946 3995 3.580458 ACTTCACCAGACAGCAGTATCTT 59.420 43.478 0.00 0.00 0.00 2.40
3947 3996 4.040952 ACTTCACCAGACAGCAGTATCTTT 59.959 41.667 0.00 0.00 0.00 2.52
3948 3997 3.930336 TCACCAGACAGCAGTATCTTTG 58.070 45.455 0.00 0.00 0.00 2.77
3949 3998 3.005554 CACCAGACAGCAGTATCTTTGG 58.994 50.000 0.00 0.00 0.00 3.28
3950 3999 2.012673 CCAGACAGCAGTATCTTTGGC 58.987 52.381 0.00 0.00 0.00 4.52
3951 4000 2.012673 CAGACAGCAGTATCTTTGGCC 58.987 52.381 0.00 0.00 0.00 5.36
3952 4001 1.009829 GACAGCAGTATCTTTGGCCG 58.990 55.000 0.00 0.00 0.00 6.13
3953 4002 1.026718 ACAGCAGTATCTTTGGCCGC 61.027 55.000 0.00 0.00 0.00 6.53
3954 4003 1.026182 CAGCAGTATCTTTGGCCGCA 61.026 55.000 0.00 0.00 0.00 5.69
3955 4004 0.745845 AGCAGTATCTTTGGCCGCAG 60.746 55.000 0.00 0.00 0.00 5.18
3956 4005 1.723870 CAGTATCTTTGGCCGCAGC 59.276 57.895 0.00 0.00 38.76 5.25
3957 4006 0.745845 CAGTATCTTTGGCCGCAGCT 60.746 55.000 0.00 0.00 39.73 4.24
3958 4007 0.462759 AGTATCTTTGGCCGCAGCTC 60.463 55.000 0.00 0.00 39.73 4.09
3959 4008 0.744414 GTATCTTTGGCCGCAGCTCA 60.744 55.000 0.00 0.00 39.73 4.26
3960 4009 0.462581 TATCTTTGGCCGCAGCTCAG 60.463 55.000 0.00 0.00 39.73 3.35
3961 4010 3.437795 CTTTGGCCGCAGCTCAGG 61.438 66.667 0.00 0.00 39.73 3.86
3962 4011 3.907260 CTTTGGCCGCAGCTCAGGA 62.907 63.158 8.11 0.00 39.73 3.86
3963 4012 3.490031 TTTGGCCGCAGCTCAGGAA 62.490 57.895 8.11 0.00 39.73 3.36
3964 4013 4.704833 TGGCCGCAGCTCAGGAAC 62.705 66.667 8.11 1.10 39.73 3.62
3965 4014 4.400961 GGCCGCAGCTCAGGAACT 62.401 66.667 8.11 0.00 38.34 3.01
3979 4028 3.258971 AGGAACTGCTATGCTCTGAAC 57.741 47.619 0.00 0.00 37.18 3.18
3980 4029 2.568956 AGGAACTGCTATGCTCTGAACA 59.431 45.455 0.00 0.00 37.18 3.18
3981 4030 3.008375 AGGAACTGCTATGCTCTGAACAA 59.992 43.478 0.00 0.00 37.18 2.83
3982 4031 3.373439 GGAACTGCTATGCTCTGAACAAG 59.627 47.826 0.00 0.00 0.00 3.16
3983 4032 2.354259 ACTGCTATGCTCTGAACAAGC 58.646 47.619 7.71 7.71 40.26 4.01
3990 4039 1.949525 TGCTCTGAACAAGCAAGAACC 59.050 47.619 0.00 0.00 46.29 3.62
3991 4040 1.949525 GCTCTGAACAAGCAAGAACCA 59.050 47.619 0.00 0.00 39.61 3.67
3992 4041 2.287248 GCTCTGAACAAGCAAGAACCAC 60.287 50.000 0.00 0.00 39.61 4.16
3993 4042 1.939934 TCTGAACAAGCAAGAACCACG 59.060 47.619 0.00 0.00 0.00 4.94
3994 4043 0.380378 TGAACAAGCAAGAACCACGC 59.620 50.000 0.00 0.00 0.00 5.34
3995 4044 0.380378 GAACAAGCAAGAACCACGCA 59.620 50.000 0.00 0.00 0.00 5.24
3996 4045 1.001378 GAACAAGCAAGAACCACGCAT 60.001 47.619 0.00 0.00 0.00 4.73
3997 4046 0.311790 ACAAGCAAGAACCACGCATG 59.688 50.000 0.00 0.00 0.00 4.06
4009 4058 0.940126 CACGCATGGAAGACTATGGC 59.060 55.000 0.00 0.00 35.89 4.40
4010 4059 0.541392 ACGCATGGAAGACTATGGCA 59.459 50.000 0.00 0.00 35.89 4.92
4011 4060 0.940126 CGCATGGAAGACTATGGCAC 59.060 55.000 0.00 0.00 35.89 5.01
4012 4061 0.940126 GCATGGAAGACTATGGCACG 59.060 55.000 0.00 0.00 35.89 5.34
4013 4062 1.743772 GCATGGAAGACTATGGCACGT 60.744 52.381 0.00 0.00 35.89 4.49
4014 4063 1.935873 CATGGAAGACTATGGCACGTG 59.064 52.381 12.28 12.28 32.53 4.49
4015 4064 0.391130 TGGAAGACTATGGCACGTGC 60.391 55.000 32.15 32.15 41.14 5.34
4016 4065 0.108138 GGAAGACTATGGCACGTGCT 60.108 55.000 36.84 22.72 41.70 4.40
4017 4066 1.002366 GAAGACTATGGCACGTGCTG 58.998 55.000 36.84 25.44 41.70 4.41
4018 4067 0.321671 AAGACTATGGCACGTGCTGT 59.678 50.000 36.84 28.04 41.70 4.40
4019 4068 0.321671 AGACTATGGCACGTGCTGTT 59.678 50.000 36.84 23.99 41.70 3.16
4020 4069 1.156736 GACTATGGCACGTGCTGTTT 58.843 50.000 36.84 21.71 41.70 2.83
4021 4070 0.874390 ACTATGGCACGTGCTGTTTG 59.126 50.000 36.84 24.51 41.70 2.93
4022 4071 0.454957 CTATGGCACGTGCTGTTTGC 60.455 55.000 36.84 21.14 41.70 3.68
4023 4072 0.888736 TATGGCACGTGCTGTTTGCT 60.889 50.000 36.84 17.11 43.37 3.91
4024 4073 2.353839 GGCACGTGCTGTTTGCTG 60.354 61.111 36.84 0.00 43.37 4.41
4025 4074 3.026311 GCACGTGCTGTTTGCTGC 61.026 61.111 32.55 1.96 43.37 5.25
4026 4075 2.353839 CACGTGCTGTTTGCTGCC 60.354 61.111 0.82 0.00 43.37 4.85
4027 4076 2.516930 ACGTGCTGTTTGCTGCCT 60.517 55.556 0.00 0.00 43.37 4.75
4028 4077 2.050714 CGTGCTGTTTGCTGCCTG 60.051 61.111 0.00 0.00 43.37 4.85
4029 4078 2.355481 GTGCTGTTTGCTGCCTGC 60.355 61.111 0.00 0.00 43.37 4.85
4030 4079 2.520020 TGCTGTTTGCTGCCTGCT 60.520 55.556 0.00 0.00 43.37 4.24
4031 4080 2.257676 GCTGTTTGCTGCCTGCTC 59.742 61.111 0.00 0.00 43.37 4.26
4032 4081 2.266627 GCTGTTTGCTGCCTGCTCT 61.267 57.895 0.00 0.00 43.37 4.09
4033 4082 1.579932 CTGTTTGCTGCCTGCTCTG 59.420 57.895 0.00 0.00 43.37 3.35
4034 4083 1.152902 TGTTTGCTGCCTGCTCTGT 60.153 52.632 0.00 0.00 43.37 3.41
4035 4084 0.108396 TGTTTGCTGCCTGCTCTGTA 59.892 50.000 0.00 0.00 43.37 2.74
4036 4085 0.801251 GTTTGCTGCCTGCTCTGTAG 59.199 55.000 0.00 0.00 43.37 2.74
4046 4095 3.145228 GCTCTGTAGCCTTGTGGAC 57.855 57.895 0.00 0.00 43.40 4.02
4047 4096 0.610687 GCTCTGTAGCCTTGTGGACT 59.389 55.000 0.00 0.00 43.40 3.85
4048 4097 1.674221 GCTCTGTAGCCTTGTGGACTG 60.674 57.143 0.00 0.00 43.40 3.51
4049 4098 0.321671 TCTGTAGCCTTGTGGACTGC 59.678 55.000 0.00 0.00 34.57 4.40
4050 4099 0.674895 CTGTAGCCTTGTGGACTGCC 60.675 60.000 0.00 0.00 34.57 4.85
4051 4100 1.374947 GTAGCCTTGTGGACTGCCA 59.625 57.895 0.00 0.00 43.47 4.92
4055 4104 0.823356 GCCTTGTGGACTGCCAGAAA 60.823 55.000 0.00 0.00 45.67 2.52
4056 4105 0.954452 CCTTGTGGACTGCCAGAAAC 59.046 55.000 0.00 0.00 45.67 2.78
4057 4106 0.588252 CTTGTGGACTGCCAGAAACG 59.412 55.000 0.00 0.00 45.67 3.60
4058 4107 3.323268 CTTGTGGACTGCCAGAAACGC 62.323 57.143 0.00 0.00 45.67 4.84
4059 4108 2.508436 TGGACTGCCAGAAACGCA 59.492 55.556 0.00 0.00 39.92 5.24
4060 4109 1.891919 TGGACTGCCAGAAACGCAC 60.892 57.895 0.00 0.00 39.92 5.34
4061 4110 2.551270 GACTGCCAGAAACGCACG 59.449 61.111 0.00 0.00 31.61 5.34
4062 4111 2.954753 GACTGCCAGAAACGCACGG 61.955 63.158 0.00 0.00 31.61 4.94
4063 4112 2.664851 CTGCCAGAAACGCACGGA 60.665 61.111 0.00 0.00 31.61 4.69
4064 4113 2.031919 TGCCAGAAACGCACGGAT 59.968 55.556 0.00 0.00 0.00 4.18
4065 4114 1.970917 CTGCCAGAAACGCACGGATC 61.971 60.000 0.00 0.00 31.61 3.36
4066 4115 1.741770 GCCAGAAACGCACGGATCT 60.742 57.895 0.00 0.00 0.00 2.75
4067 4116 1.298859 GCCAGAAACGCACGGATCTT 61.299 55.000 0.00 0.00 0.00 2.40
4068 4117 1.156736 CCAGAAACGCACGGATCTTT 58.843 50.000 0.00 0.00 0.00 2.52
4069 4118 1.135972 CCAGAAACGCACGGATCTTTG 60.136 52.381 0.00 0.00 0.00 2.77
4070 4119 1.798223 CAGAAACGCACGGATCTTTGA 59.202 47.619 0.00 0.00 0.00 2.69
4071 4120 1.798813 AGAAACGCACGGATCTTTGAC 59.201 47.619 0.00 0.00 0.00 3.18
4072 4121 1.529438 GAAACGCACGGATCTTTGACA 59.471 47.619 0.00 0.00 0.00 3.58
4073 4122 1.148310 AACGCACGGATCTTTGACAG 58.852 50.000 0.00 0.00 0.00 3.51
4074 4123 0.670546 ACGCACGGATCTTTGACAGG 60.671 55.000 0.00 0.00 0.00 4.00
4075 4124 0.389817 CGCACGGATCTTTGACAGGA 60.390 55.000 0.00 0.00 0.00 3.86
4076 4125 1.808411 GCACGGATCTTTGACAGGAA 58.192 50.000 0.00 0.00 0.00 3.36
4077 4126 1.464997 GCACGGATCTTTGACAGGAAC 59.535 52.381 0.00 0.00 0.00 3.62
4078 4127 2.872038 GCACGGATCTTTGACAGGAACT 60.872 50.000 0.00 0.00 43.88 3.01
4079 4128 2.996621 CACGGATCTTTGACAGGAACTC 59.003 50.000 0.00 0.00 34.60 3.01
4080 4129 2.028020 ACGGATCTTTGACAGGAACTCC 60.028 50.000 0.00 0.00 34.60 3.85
4089 4138 2.208349 AGGAACTCCTGGGGTGCT 59.792 61.111 4.27 0.00 46.55 4.40
4090 4139 2.227036 AGGAACTCCTGGGGTGCTG 61.227 63.158 4.27 0.00 46.55 4.41
4091 4140 2.352805 GAACTCCTGGGGTGCTGG 59.647 66.667 0.00 0.00 0.00 4.85
4092 4141 3.927481 GAACTCCTGGGGTGCTGGC 62.927 68.421 0.00 0.00 0.00 4.85
4107 4156 2.282180 GGCCGTGCCTTCAAGGAA 60.282 61.111 7.98 0.00 46.69 3.36
4108 4157 1.901464 GGCCGTGCCTTCAAGGAAA 60.901 57.895 7.98 0.00 46.69 3.13
4109 4158 1.250840 GGCCGTGCCTTCAAGGAAAT 61.251 55.000 7.98 0.00 46.69 2.17
4110 4159 0.603065 GCCGTGCCTTCAAGGAAATT 59.397 50.000 7.98 0.00 43.37 1.82
4111 4160 1.669795 GCCGTGCCTTCAAGGAAATTG 60.670 52.381 7.98 0.00 43.37 2.32
4112 4161 1.669795 CCGTGCCTTCAAGGAAATTGC 60.670 52.381 7.98 0.00 43.37 3.56
4113 4162 1.270550 CGTGCCTTCAAGGAAATTGCT 59.729 47.619 7.98 0.00 37.67 3.91
4114 4163 2.680577 GTGCCTTCAAGGAAATTGCTG 58.319 47.619 7.98 0.00 37.67 4.41
4115 4164 2.297033 GTGCCTTCAAGGAAATTGCTGA 59.703 45.455 7.98 0.00 37.67 4.26
4116 4165 2.297033 TGCCTTCAAGGAAATTGCTGAC 59.703 45.455 7.98 0.00 37.67 3.51
4117 4166 2.353109 GCCTTCAAGGAAATTGCTGACC 60.353 50.000 7.98 0.00 37.67 4.02
4118 4167 3.160269 CCTTCAAGGAAATTGCTGACCT 58.840 45.455 0.00 0.00 37.67 3.85
4119 4168 3.575687 CCTTCAAGGAAATTGCTGACCTT 59.424 43.478 0.00 0.00 42.49 3.50
4120 4169 4.321527 CCTTCAAGGAAATTGCTGACCTTC 60.322 45.833 0.00 0.00 40.21 3.46
4121 4170 4.104383 TCAAGGAAATTGCTGACCTTCT 57.896 40.909 0.00 0.00 40.21 2.85
4122 4171 4.074970 TCAAGGAAATTGCTGACCTTCTC 58.925 43.478 0.00 0.00 40.21 2.87
4123 4172 3.795688 AGGAAATTGCTGACCTTCTCA 57.204 42.857 0.00 0.00 0.00 3.27
4124 4173 4.104383 AGGAAATTGCTGACCTTCTCAA 57.896 40.909 0.00 0.00 0.00 3.02
4125 4174 3.823304 AGGAAATTGCTGACCTTCTCAAC 59.177 43.478 0.00 0.00 0.00 3.18
4126 4175 3.057245 GGAAATTGCTGACCTTCTCAACC 60.057 47.826 0.00 0.00 0.00 3.77
4127 4176 3.515602 AATTGCTGACCTTCTCAACCT 57.484 42.857 0.00 0.00 0.00 3.50
4128 4177 4.640771 AATTGCTGACCTTCTCAACCTA 57.359 40.909 0.00 0.00 0.00 3.08
4129 4178 4.851639 ATTGCTGACCTTCTCAACCTAT 57.148 40.909 0.00 0.00 0.00 2.57
4130 4179 3.616956 TGCTGACCTTCTCAACCTATG 57.383 47.619 0.00 0.00 0.00 2.23
4131 4180 2.237143 TGCTGACCTTCTCAACCTATGG 59.763 50.000 0.00 0.00 0.00 2.74
4132 4181 2.501723 GCTGACCTTCTCAACCTATGGA 59.498 50.000 0.00 0.00 0.00 3.41
4133 4182 3.431486 GCTGACCTTCTCAACCTATGGAG 60.431 52.174 0.00 0.00 0.00 3.86
4134 4183 2.501723 TGACCTTCTCAACCTATGGAGC 59.498 50.000 0.00 0.00 0.00 4.70
4135 4184 2.501723 GACCTTCTCAACCTATGGAGCA 59.498 50.000 0.00 0.00 0.00 4.26
4136 4185 3.118531 ACCTTCTCAACCTATGGAGCAT 58.881 45.455 0.00 0.00 0.00 3.79
4137 4186 3.118112 ACCTTCTCAACCTATGGAGCATG 60.118 47.826 0.00 0.00 0.00 4.06
4138 4187 2.627515 TCTCAACCTATGGAGCATGC 57.372 50.000 10.51 10.51 0.00 4.06
4139 4188 1.202568 TCTCAACCTATGGAGCATGCG 60.203 52.381 13.01 0.00 0.00 4.73
4140 4189 0.829990 TCAACCTATGGAGCATGCGA 59.170 50.000 13.01 0.19 0.00 5.10
4141 4190 1.202568 TCAACCTATGGAGCATGCGAG 60.203 52.381 13.01 5.89 0.00 5.03
4142 4191 0.533755 AACCTATGGAGCATGCGAGC 60.534 55.000 13.01 5.86 0.00 5.03
4149 4198 2.103934 AGCATGCGAGCTCGTCTC 59.896 61.111 34.46 20.08 42.18 3.36
4150 4199 2.959071 GCATGCGAGCTCGTCTCC 60.959 66.667 34.46 19.72 42.22 3.71
4151 4200 2.491621 CATGCGAGCTCGTCTCCA 59.508 61.111 34.46 24.44 42.22 3.86
4152 4201 1.588403 CATGCGAGCTCGTCTCCAG 60.588 63.158 34.46 16.34 42.22 3.86
4153 4202 3.423162 ATGCGAGCTCGTCTCCAGC 62.423 63.158 34.46 18.00 42.22 4.85
4154 4203 4.863925 GCGAGCTCGTCTCCAGCC 62.864 72.222 34.46 13.69 42.22 4.85
4155 4204 4.544689 CGAGCTCGTCTCCAGCCG 62.545 72.222 27.79 0.00 38.62 5.52
4156 4205 4.200283 GAGCTCGTCTCCAGCCGG 62.200 72.222 0.00 0.00 37.63 6.13
4157 4206 4.742649 AGCTCGTCTCCAGCCGGA 62.743 66.667 5.05 0.00 37.63 5.14
4158 4207 3.532155 GCTCGTCTCCAGCCGGAT 61.532 66.667 5.05 0.00 41.79 4.18
4159 4208 2.194212 GCTCGTCTCCAGCCGGATA 61.194 63.158 5.05 0.00 41.79 2.59
4160 4209 1.953017 CTCGTCTCCAGCCGGATAG 59.047 63.158 5.05 0.00 41.79 2.08
4161 4210 0.535328 CTCGTCTCCAGCCGGATAGA 60.535 60.000 5.05 0.00 41.79 1.98
4162 4211 0.535328 TCGTCTCCAGCCGGATAGAG 60.535 60.000 9.02 9.02 41.79 2.43
4163 4212 0.535328 CGTCTCCAGCCGGATAGAGA 60.535 60.000 14.06 14.06 41.79 3.10
4164 4213 1.693627 GTCTCCAGCCGGATAGAGAA 58.306 55.000 19.47 1.47 41.79 2.87
4165 4214 1.338655 GTCTCCAGCCGGATAGAGAAC 59.661 57.143 19.47 10.14 41.79 3.01
4166 4215 1.215673 TCTCCAGCCGGATAGAGAACT 59.784 52.381 15.67 0.00 41.79 3.01
4167 4216 1.339610 CTCCAGCCGGATAGAGAACTG 59.660 57.143 9.76 1.71 41.79 3.16
4168 4217 0.249657 CCAGCCGGATAGAGAACTGC 60.250 60.000 5.05 0.00 0.00 4.40
4169 4218 0.749649 CAGCCGGATAGAGAACTGCT 59.250 55.000 5.05 0.00 0.00 4.24
4170 4219 1.957177 CAGCCGGATAGAGAACTGCTA 59.043 52.381 5.05 0.00 0.00 3.49
4171 4220 1.957877 AGCCGGATAGAGAACTGCTAC 59.042 52.381 5.05 0.00 0.00 3.58
4172 4221 1.957877 GCCGGATAGAGAACTGCTACT 59.042 52.381 5.05 0.00 0.00 2.57
4173 4222 2.287909 GCCGGATAGAGAACTGCTACTG 60.288 54.545 5.05 0.00 0.00 2.74
4174 4223 2.287909 CCGGATAGAGAACTGCTACTGC 60.288 54.545 0.00 0.00 40.20 4.40
4176 4225 3.712187 GGATAGAGAACTGCTACTGCAC 58.288 50.000 0.00 0.00 45.31 4.57
4177 4226 3.383185 GGATAGAGAACTGCTACTGCACT 59.617 47.826 0.00 0.00 45.31 4.40
4178 4227 2.739885 AGAGAACTGCTACTGCACTG 57.260 50.000 0.00 0.00 45.31 3.66
4179 4228 1.274728 AGAGAACTGCTACTGCACTGG 59.725 52.381 0.00 0.00 45.31 4.00
4180 4229 0.322975 AGAACTGCTACTGCACTGGG 59.677 55.000 0.00 0.00 45.31 4.45
4181 4230 1.301677 GAACTGCTACTGCACTGGGC 61.302 60.000 0.00 0.00 45.31 5.36
4182 4231 1.772819 AACTGCTACTGCACTGGGCT 61.773 55.000 2.50 0.00 45.31 5.19
4183 4232 0.904865 ACTGCTACTGCACTGGGCTA 60.905 55.000 2.50 0.00 45.31 3.93
4184 4233 0.179089 CTGCTACTGCACTGGGCTAG 60.179 60.000 2.50 0.00 45.31 3.42
4185 4234 0.904865 TGCTACTGCACTGGGCTAGT 60.905 55.000 2.50 7.78 45.31 2.57
4186 4235 0.179097 GCTACTGCACTGGGCTAGTC 60.179 60.000 2.50 0.00 45.15 2.59
4187 4236 1.479709 CTACTGCACTGGGCTAGTCT 58.520 55.000 2.50 0.00 45.15 3.24
4188 4237 1.135915 CTACTGCACTGGGCTAGTCTG 59.864 57.143 2.50 3.53 45.15 3.51
4189 4238 0.833834 ACTGCACTGGGCTAGTCTGT 60.834 55.000 2.50 4.13 45.15 3.41
4190 4239 0.322975 CTGCACTGGGCTAGTCTGTT 59.677 55.000 2.50 0.00 45.15 3.16
4191 4240 0.321671 TGCACTGGGCTAGTCTGTTC 59.678 55.000 2.50 0.00 45.15 3.18
4192 4241 0.610687 GCACTGGGCTAGTCTGTTCT 59.389 55.000 0.00 0.00 37.60 3.01
4193 4242 1.404851 GCACTGGGCTAGTCTGTTCTC 60.405 57.143 0.00 0.00 37.60 2.87
4194 4243 1.205893 CACTGGGCTAGTCTGTTCTCC 59.794 57.143 0.00 0.00 37.60 3.71
4195 4244 0.457851 CTGGGCTAGTCTGTTCTCCG 59.542 60.000 0.00 0.00 0.00 4.63
4196 4245 1.142097 GGGCTAGTCTGTTCTCCGC 59.858 63.158 0.00 0.00 0.00 5.54
4197 4246 1.324005 GGGCTAGTCTGTTCTCCGCT 61.324 60.000 0.00 0.00 0.00 5.52
4198 4247 1.390565 GGCTAGTCTGTTCTCCGCTA 58.609 55.000 0.00 0.00 0.00 4.26
4199 4248 1.065851 GGCTAGTCTGTTCTCCGCTAC 59.934 57.143 0.00 0.00 0.00 3.58
4200 4249 2.018515 GCTAGTCTGTTCTCCGCTACT 58.981 52.381 0.00 0.00 0.00 2.57
4201 4250 2.424246 GCTAGTCTGTTCTCCGCTACTT 59.576 50.000 0.00 0.00 0.00 2.24
4202 4251 3.626670 GCTAGTCTGTTCTCCGCTACTTA 59.373 47.826 0.00 0.00 0.00 2.24
4203 4252 4.096081 GCTAGTCTGTTCTCCGCTACTTAA 59.904 45.833 0.00 0.00 0.00 1.85
4204 4253 4.705337 AGTCTGTTCTCCGCTACTTAAG 57.295 45.455 0.00 0.00 0.00 1.85
4217 4266 1.581223 ACTTAAGCTGTACCCCCTCC 58.419 55.000 1.29 0.00 0.00 4.30
4218 4267 0.837940 CTTAAGCTGTACCCCCTCCC 59.162 60.000 0.00 0.00 0.00 4.30
4219 4268 0.622446 TTAAGCTGTACCCCCTCCCC 60.622 60.000 0.00 0.00 0.00 4.81
4220 4269 2.556608 TAAGCTGTACCCCCTCCCCC 62.557 65.000 0.00 0.00 0.00 5.40
4238 4287 3.160679 CCCCCATGTTCTCTGTTTTCT 57.839 47.619 0.00 0.00 0.00 2.52
4239 4288 2.821969 CCCCCATGTTCTCTGTTTTCTG 59.178 50.000 0.00 0.00 0.00 3.02
4240 4289 2.229784 CCCCATGTTCTCTGTTTTCTGC 59.770 50.000 0.00 0.00 0.00 4.26
4241 4290 3.152341 CCCATGTTCTCTGTTTTCTGCT 58.848 45.455 0.00 0.00 0.00 4.24
4242 4291 3.190118 CCCATGTTCTCTGTTTTCTGCTC 59.810 47.826 0.00 0.00 0.00 4.26
4243 4292 4.070716 CCATGTTCTCTGTTTTCTGCTCT 58.929 43.478 0.00 0.00 0.00 4.09
4244 4293 4.153835 CCATGTTCTCTGTTTTCTGCTCTC 59.846 45.833 0.00 0.00 0.00 3.20
4245 4294 4.679373 TGTTCTCTGTTTTCTGCTCTCT 57.321 40.909 0.00 0.00 0.00 3.10
4246 4295 4.375272 TGTTCTCTGTTTTCTGCTCTCTG 58.625 43.478 0.00 0.00 0.00 3.35
4247 4296 4.100035 TGTTCTCTGTTTTCTGCTCTCTGA 59.900 41.667 0.00 0.00 0.00 3.27
4248 4297 5.221601 TGTTCTCTGTTTTCTGCTCTCTGAT 60.222 40.000 0.00 0.00 0.00 2.90
4249 4298 4.818642 TCTCTGTTTTCTGCTCTCTGATG 58.181 43.478 0.00 0.00 0.00 3.07
4250 4299 3.933955 CTCTGTTTTCTGCTCTCTGATGG 59.066 47.826 0.00 0.00 0.00 3.51
4251 4300 3.326006 TCTGTTTTCTGCTCTCTGATGGT 59.674 43.478 0.00 0.00 0.00 3.55
4252 4301 4.070716 CTGTTTTCTGCTCTCTGATGGTT 58.929 43.478 0.00 0.00 0.00 3.67
4253 4302 4.464008 TGTTTTCTGCTCTCTGATGGTTT 58.536 39.130 0.00 0.00 0.00 3.27
4254 4303 4.276678 TGTTTTCTGCTCTCTGATGGTTTG 59.723 41.667 0.00 0.00 0.00 2.93
4255 4304 2.775911 TCTGCTCTCTGATGGTTTGG 57.224 50.000 0.00 0.00 0.00 3.28
4256 4305 1.980765 TCTGCTCTCTGATGGTTTGGT 59.019 47.619 0.00 0.00 0.00 3.67
4257 4306 2.082231 CTGCTCTCTGATGGTTTGGTG 58.918 52.381 0.00 0.00 0.00 4.17
4258 4307 1.699083 TGCTCTCTGATGGTTTGGTGA 59.301 47.619 0.00 0.00 0.00 4.02
4259 4308 2.306805 TGCTCTCTGATGGTTTGGTGAT 59.693 45.455 0.00 0.00 0.00 3.06
4260 4309 2.681848 GCTCTCTGATGGTTTGGTGATG 59.318 50.000 0.00 0.00 0.00 3.07
4261 4310 3.276857 CTCTCTGATGGTTTGGTGATGG 58.723 50.000 0.00 0.00 0.00 3.51
4262 4311 1.747355 CTCTGATGGTTTGGTGATGGC 59.253 52.381 0.00 0.00 0.00 4.40
4263 4312 0.819582 CTGATGGTTTGGTGATGGCC 59.180 55.000 0.00 0.00 0.00 5.36
4264 4313 0.113972 TGATGGTTTGGTGATGGCCA 59.886 50.000 8.56 8.56 36.62 5.36
4265 4314 0.819582 GATGGTTTGGTGATGGCCAG 59.180 55.000 13.05 0.00 40.01 4.85
4266 4315 1.259840 ATGGTTTGGTGATGGCCAGC 61.260 55.000 15.83 15.83 43.29 4.85
4267 4316 1.607467 GGTTTGGTGATGGCCAGCT 60.607 57.895 23.69 0.00 43.38 4.24
4268 4317 1.588082 GTTTGGTGATGGCCAGCTG 59.412 57.895 23.69 6.78 43.38 4.24
4269 4318 2.277591 TTTGGTGATGGCCAGCTGC 61.278 57.895 23.69 14.68 43.38 5.25
4270 4319 2.998301 TTTGGTGATGGCCAGCTGCA 62.998 55.000 23.69 9.40 43.38 4.41
4271 4320 3.446570 GGTGATGGCCAGCTGCAC 61.447 66.667 23.69 20.01 43.89 4.57
4272 4321 2.674033 GTGATGGCCAGCTGCACA 60.674 61.111 23.69 9.72 43.89 4.57
4273 4322 2.050350 GTGATGGCCAGCTGCACAT 61.050 57.895 23.69 17.85 43.89 3.21
4274 4323 2.049767 TGATGGCCAGCTGCACATG 61.050 57.895 23.69 4.53 43.89 3.21
4275 4324 2.036731 ATGGCCAGCTGCACATGT 59.963 55.556 13.05 0.00 43.89 3.21
4276 4325 1.601419 GATGGCCAGCTGCACATGTT 61.601 55.000 21.40 3.71 43.89 2.71
4277 4326 1.884075 ATGGCCAGCTGCACATGTTG 61.884 55.000 13.05 0.00 43.89 3.33
4278 4327 2.567497 GGCCAGCTGCACATGTTGT 61.567 57.895 8.66 0.00 43.89 3.32
4286 4335 2.640989 CACATGTTGTGCAGCGCT 59.359 55.556 2.64 2.64 41.89 5.92
4287 4336 1.008194 CACATGTTGTGCAGCGCTT 60.008 52.632 7.50 0.00 41.89 4.68
4288 4337 0.238025 CACATGTTGTGCAGCGCTTA 59.762 50.000 7.50 0.00 41.89 3.09
4289 4338 0.950836 ACATGTTGTGCAGCGCTTAA 59.049 45.000 7.50 0.00 0.00 1.85
4290 4339 1.330306 CATGTTGTGCAGCGCTTAAC 58.670 50.000 7.50 10.06 0.00 2.01
4291 4340 0.950836 ATGTTGTGCAGCGCTTAACA 59.049 45.000 21.15 21.15 38.53 2.41
4292 4341 0.950836 TGTTGTGCAGCGCTTAACAT 59.049 45.000 19.58 0.00 33.19 2.71
4293 4342 1.069296 TGTTGTGCAGCGCTTAACATC 60.069 47.619 19.58 18.45 33.19 3.06
4294 4343 1.069296 GTTGTGCAGCGCTTAACATCA 60.069 47.619 19.58 11.14 0.00 3.07
4295 4344 0.516877 TGTGCAGCGCTTAACATCAC 59.483 50.000 7.50 9.73 0.00 3.06
4296 4345 0.179189 GTGCAGCGCTTAACATCACC 60.179 55.000 7.50 0.00 0.00 4.02
4297 4346 0.321564 TGCAGCGCTTAACATCACCT 60.322 50.000 7.50 0.00 0.00 4.00
4298 4347 0.804989 GCAGCGCTTAACATCACCTT 59.195 50.000 7.50 0.00 0.00 3.50
4299 4348 1.202076 GCAGCGCTTAACATCACCTTC 60.202 52.381 7.50 0.00 0.00 3.46
4300 4349 2.076100 CAGCGCTTAACATCACCTTCA 58.924 47.619 7.50 0.00 0.00 3.02
4301 4350 2.679837 CAGCGCTTAACATCACCTTCAT 59.320 45.455 7.50 0.00 0.00 2.57
4302 4351 2.679837 AGCGCTTAACATCACCTTCATG 59.320 45.455 2.64 0.00 0.00 3.07
4303 4352 2.420022 GCGCTTAACATCACCTTCATGT 59.580 45.455 0.00 0.00 35.94 3.21
4304 4353 3.621268 GCGCTTAACATCACCTTCATGTA 59.379 43.478 0.00 0.00 33.12 2.29
4305 4354 4.094294 GCGCTTAACATCACCTTCATGTAA 59.906 41.667 0.00 0.00 33.12 2.41
4306 4355 5.391523 GCGCTTAACATCACCTTCATGTAAA 60.392 40.000 0.00 0.00 33.12 2.01
4307 4356 6.677920 GCGCTTAACATCACCTTCATGTAAAT 60.678 38.462 0.00 0.00 33.12 1.40
4308 4357 6.688385 CGCTTAACATCACCTTCATGTAAATG 59.312 38.462 0.00 0.00 33.12 2.32
4309 4358 7.413988 CGCTTAACATCACCTTCATGTAAATGA 60.414 37.037 0.00 0.00 33.12 2.57
4310 4359 7.698130 GCTTAACATCACCTTCATGTAAATGAC 59.302 37.037 0.00 0.00 33.12 3.06
4311 4360 8.862325 TTAACATCACCTTCATGTAAATGACT 57.138 30.769 0.00 0.00 33.12 3.41
4312 4361 7.765695 AACATCACCTTCATGTAAATGACTT 57.234 32.000 0.00 0.00 33.12 3.01
4313 4362 7.383102 ACATCACCTTCATGTAAATGACTTC 57.617 36.000 0.00 0.00 32.48 3.01
4314 4363 6.092670 ACATCACCTTCATGTAAATGACTTCG 59.907 38.462 0.00 0.00 32.48 3.79
4315 4364 4.935205 TCACCTTCATGTAAATGACTTCGG 59.065 41.667 0.00 0.00 0.00 4.30
4316 4365 4.695455 CACCTTCATGTAAATGACTTCGGT 59.305 41.667 0.00 0.00 0.00 4.69
4317 4366 5.181245 CACCTTCATGTAAATGACTTCGGTT 59.819 40.000 0.00 0.00 0.00 4.44
4318 4367 5.181245 ACCTTCATGTAAATGACTTCGGTTG 59.819 40.000 0.00 0.00 0.00 3.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.076863 GCACGCTTAGGAACAAGATGT 58.923 47.619 0.00 0.00 0.00 3.06
154 160 2.723273 GGTATTGCCACCACTAAGCTT 58.277 47.619 3.48 3.48 38.55 3.74
236 242 0.604578 GCATCAGCAAAAGCAGGGAA 59.395 50.000 0.00 0.00 41.58 3.97
387 393 4.983671 AAACAAGTCAAGGGACAGAAAC 57.016 40.909 0.00 0.00 46.80 2.78
399 405 3.248363 CAGTCGAGCATGAAAACAAGTCA 59.752 43.478 0.00 0.00 0.00 3.41
429 436 7.227910 TGGTTTTTCTAGTGACAATGTAGGAAC 59.772 37.037 0.00 0.00 0.00 3.62
433 440 6.348540 GCCTGGTTTTTCTAGTGACAATGTAG 60.349 42.308 0.00 0.00 0.00 2.74
536 543 7.704899 GTGCAACTTAAAGTTTCCTGTGTAAAT 59.295 33.333 0.00 0.00 36.03 1.40
660 667 1.611977 AGGAACGCACCCTTTTTAAGC 59.388 47.619 0.00 0.00 0.00 3.09
697 704 3.983344 CGCAATCAGTTTTCTTTTCCAGG 59.017 43.478 0.00 0.00 0.00 4.45
710 717 0.250467 ACCAAGTCAGCGCAATCAGT 60.250 50.000 11.47 0.00 0.00 3.41
786 793 2.028420 TCACTGCACATATGTCTGCC 57.972 50.000 5.07 0.00 0.00 4.85
853 861 6.206634 ACACTAAGCTTAAAAATGTAGCTGCA 59.793 34.615 7.05 7.05 44.05 4.41
861 869 8.454106 AGCATACTGACACTAAGCTTAAAAATG 58.546 33.333 7.74 6.42 0.00 2.32
863 871 7.979444 AGCATACTGACACTAAGCTTAAAAA 57.021 32.000 7.74 0.00 0.00 1.94
893 901 7.654022 AAAGTGGACATTTAGTGAGGAAAAA 57.346 32.000 0.00 0.00 0.00 1.94
894 902 7.123547 ACAAAAGTGGACATTTAGTGAGGAAAA 59.876 33.333 0.00 0.00 0.00 2.29
895 903 6.605594 ACAAAAGTGGACATTTAGTGAGGAAA 59.394 34.615 0.00 0.00 0.00 3.13
896 904 6.126409 ACAAAAGTGGACATTTAGTGAGGAA 58.874 36.000 0.00 0.00 0.00 3.36
897 905 5.690865 ACAAAAGTGGACATTTAGTGAGGA 58.309 37.500 0.00 0.00 0.00 3.71
898 906 6.391227 AACAAAAGTGGACATTTAGTGAGG 57.609 37.500 0.00 0.00 0.00 3.86
945 954 3.983344 GCAGCACCTTCATTTGTTTACAG 59.017 43.478 0.00 0.00 0.00 2.74
1077 1086 0.959372 CCAAGTCTGCTTCTGCCAGG 60.959 60.000 0.00 0.00 38.71 4.45
1098 1107 0.392327 GAAGGGCTTGGCTCTCAGAC 60.392 60.000 0.00 0.00 39.10 3.51
1177 1186 0.250684 ACACCATGCCATGAACACGA 60.251 50.000 6.18 0.00 0.00 4.35
1275 1284 3.873952 GAGAATCGAGCTTGCCAATAGTT 59.126 43.478 0.00 0.00 0.00 2.24
1279 1288 2.559440 GAGAGAATCGAGCTTGCCAAT 58.441 47.619 0.00 0.00 42.67 3.16
1371 1380 2.471743 GTGCTGAAGGTATATCGAACGC 59.528 50.000 0.00 0.00 0.00 4.84
1377 1386 9.937175 GAAAGTTTATTGTGCTGAAGGTATATC 57.063 33.333 0.00 0.00 0.00 1.63
1411 1420 2.868899 AGGACTGAAAAAGGAAGGCAG 58.131 47.619 0.00 0.00 0.00 4.85
1547 1556 2.026822 GGAAGCTTCAGGTCAGGAATGA 60.027 50.000 27.02 0.00 0.00 2.57
1740 1749 1.156645 GCACAGGCGATGGAGATGAC 61.157 60.000 0.00 0.00 0.00 3.06
2379 2406 4.400529 TGACACTTGACTACTTGAGCAA 57.599 40.909 0.00 0.00 0.00 3.91
2380 2407 4.400529 TTGACACTTGACTACTTGAGCA 57.599 40.909 0.00 0.00 0.00 4.26
2381 2408 4.811557 AGTTTGACACTTGACTACTTGAGC 59.188 41.667 0.00 0.00 27.32 4.26
2382 2409 8.594881 ATTAGTTTGACACTTGACTACTTGAG 57.405 34.615 0.00 0.00 36.88 3.02
2383 2410 8.826710 CAATTAGTTTGACACTTGACTACTTGA 58.173 33.333 6.61 0.00 37.40 3.02
2384 2411 8.612619 ACAATTAGTTTGACACTTGACTACTTG 58.387 33.333 9.47 9.47 39.31 3.16
2385 2412 8.732746 ACAATTAGTTTGACACTTGACTACTT 57.267 30.769 0.00 0.00 38.76 2.24
2386 2413 8.732746 AACAATTAGTTTGACACTTGACTACT 57.267 30.769 0.00 0.00 37.03 2.57
2387 2414 9.859692 GTAACAATTAGTTTGACACTTGACTAC 57.140 33.333 0.00 0.00 41.64 2.73
2388 2415 9.826574 AGTAACAATTAGTTTGACACTTGACTA 57.173 29.630 0.00 0.00 41.64 2.59
2389 2416 8.612619 CAGTAACAATTAGTTTGACACTTGACT 58.387 33.333 0.00 0.00 41.64 3.41
2390 2417 8.395633 ACAGTAACAATTAGTTTGACACTTGAC 58.604 33.333 0.00 0.00 41.64 3.18
2497 2531 9.614792 AGACCTATAGCAAAATAAAGGTTACTG 57.385 33.333 0.00 0.00 37.47 2.74
2515 2549 8.598916 TGTCCAAGTTTTATGTTCAGACCTATA 58.401 33.333 0.00 0.00 0.00 1.31
2560 2594 2.522185 ACAATCATTGCAGCTTCAGGT 58.478 42.857 0.00 0.00 0.00 4.00
2592 2629 9.667989 ATGTTTCTTTGCATGAAAATTTTAAGC 57.332 25.926 14.33 8.80 35.54 3.09
2599 2636 9.328845 ACAAGTTATGTTTCTTTGCATGAAAAT 57.671 25.926 14.33 12.48 40.06 1.82
2600 2637 8.602328 CACAAGTTATGTTTCTTTGCATGAAAA 58.398 29.630 14.33 0.00 41.46 2.29
2769 2806 1.679944 CCGCCTTCTGAATGGATGTGT 60.680 52.381 9.23 0.00 0.00 3.72
2850 2887 0.717784 CGTAGTCTGAGACGTACGCA 59.282 55.000 21.95 4.41 37.67 5.24
2928 2965 4.770362 TCGATGGTCTCCGGGGCA 62.770 66.667 0.00 0.00 0.00 5.36
2960 2997 0.039798 GTACACGTCCGACTTCTGCA 60.040 55.000 0.00 0.00 0.00 4.41
2995 3032 0.178767 CCCGTCAGCATCTCCATGAA 59.821 55.000 0.00 0.00 30.57 2.57
3141 3178 1.305633 CTGGACCAGCTCCTCCTCA 60.306 63.158 8.99 0.00 40.26 3.86
3332 3369 4.020617 CCTGACAGGAAGCCGGCA 62.021 66.667 31.54 3.45 37.67 5.69
3418 3459 5.224888 CAAATTGTTCAATCCAGTGAGGTG 58.775 41.667 0.00 0.00 39.02 4.00
3431 3472 3.814842 ACAGTCTCGATGCAAATTGTTCA 59.185 39.130 0.00 0.00 0.00 3.18
3530 3572 3.682885 CATGCCGCACTTGCCCAA 61.683 61.111 0.00 0.00 37.91 4.12
3542 3591 3.464494 GGGAAAGCCAGCCATGCC 61.464 66.667 0.00 0.00 35.15 4.40
3576 3625 2.203294 GGTGCCGACCAGGTGTTT 60.203 61.111 0.00 0.00 42.59 2.83
3675 3724 0.657840 GCATACAATCAGACACCGGC 59.342 55.000 0.00 0.00 0.00 6.13
3678 3727 3.338249 AGTGTGCATACAATCAGACACC 58.662 45.455 16.44 0.00 38.82 4.16
3686 3735 3.262420 GGACTTCGAGTGTGCATACAAT 58.738 45.455 16.44 0.00 38.82 2.71
3695 3744 4.052229 CGGCCGGACTTCGAGTGT 62.052 66.667 20.10 0.00 42.43 3.55
3696 3745 4.796231 CCGGCCGGACTTCGAGTG 62.796 72.222 41.82 7.45 42.43 3.51
3755 3804 6.942576 CCCTGAAGAAAATCGAATATACCCAT 59.057 38.462 0.00 0.00 0.00 4.00
3761 3810 7.611855 ACAAAGACCCTGAAGAAAATCGAATAT 59.388 33.333 0.00 0.00 0.00 1.28
3762 3811 6.940298 ACAAAGACCCTGAAGAAAATCGAATA 59.060 34.615 0.00 0.00 0.00 1.75
3767 3816 5.765182 TCTCACAAAGACCCTGAAGAAAATC 59.235 40.000 0.00 0.00 0.00 2.17
3813 3862 4.641645 TCCACCAGCCGTGCCTTG 62.642 66.667 0.00 0.00 41.53 3.61
3814 3863 4.335647 CTCCACCAGCCGTGCCTT 62.336 66.667 0.00 0.00 41.53 4.35
3818 3867 4.988598 AACGCTCCACCAGCCGTG 62.989 66.667 0.00 0.00 46.74 4.94
3819 3868 4.681978 GAACGCTCCACCAGCCGT 62.682 66.667 0.00 0.00 46.74 5.68
3821 3870 3.665675 ATCGAACGCTCCACCAGCC 62.666 63.158 0.00 0.00 46.74 4.85
3822 3871 2.125512 ATCGAACGCTCCACCAGC 60.126 61.111 0.00 0.00 45.85 4.85
3823 3872 1.811266 CCATCGAACGCTCCACCAG 60.811 63.158 0.00 0.00 0.00 4.00
3824 3873 2.264480 CCATCGAACGCTCCACCA 59.736 61.111 0.00 0.00 0.00 4.17
3825 3874 2.311688 ATCCCATCGAACGCTCCACC 62.312 60.000 0.00 0.00 0.00 4.61
3826 3875 0.462047 AATCCCATCGAACGCTCCAC 60.462 55.000 0.00 0.00 0.00 4.02
3827 3876 0.251916 AAATCCCATCGAACGCTCCA 59.748 50.000 0.00 0.00 0.00 3.86
3828 3877 1.379527 AAAATCCCATCGAACGCTCC 58.620 50.000 0.00 0.00 0.00 4.70
3829 3878 2.161609 ACAAAAATCCCATCGAACGCTC 59.838 45.455 0.00 0.00 0.00 5.03
3830 3879 2.159382 ACAAAAATCCCATCGAACGCT 58.841 42.857 0.00 0.00 0.00 5.07
3831 3880 2.629639 ACAAAAATCCCATCGAACGC 57.370 45.000 0.00 0.00 0.00 4.84
3832 3881 3.498082 GGAACAAAAATCCCATCGAACG 58.502 45.455 0.00 0.00 0.00 3.95
3841 3890 0.966179 ACCGCTGGGAACAAAAATCC 59.034 50.000 0.00 0.00 42.06 3.01
3842 3891 1.336795 CCACCGCTGGGAACAAAAATC 60.337 52.381 0.00 0.00 42.06 2.17
3843 3892 0.678950 CCACCGCTGGGAACAAAAAT 59.321 50.000 0.00 0.00 42.06 1.82
3844 3893 0.395862 TCCACCGCTGGGAACAAAAA 60.396 50.000 0.00 0.00 42.06 1.94
3845 3894 0.395862 TTCCACCGCTGGGAACAAAA 60.396 50.000 0.00 0.00 39.44 2.44
3846 3895 0.395862 TTTCCACCGCTGGGAACAAA 60.396 50.000 0.00 0.00 43.81 2.83
3847 3896 1.227664 TTTCCACCGCTGGGAACAA 59.772 52.632 0.00 0.00 43.81 2.83
3848 3897 2.919839 TTTCCACCGCTGGGAACA 59.080 55.556 0.00 0.00 43.81 3.18
3849 3898 3.351450 GTTTCCACCGCTGGGAAC 58.649 61.111 5.15 5.15 46.92 3.62
3850 3899 2.114411 GGTTTCCACCGCTGGGAA 59.886 61.111 0.00 0.00 42.49 3.97
3858 3907 4.586001 AGAATATGATGCATGGTTTCCACC 59.414 41.667 2.46 0.00 44.56 4.61
3859 3908 5.278660 GGAGAATATGATGCATGGTTTCCAC 60.279 44.000 2.46 0.31 35.80 4.02
3860 3909 4.828939 GGAGAATATGATGCATGGTTTCCA 59.171 41.667 2.46 0.00 38.19 3.53
3861 3910 5.048224 CAGGAGAATATGATGCATGGTTTCC 60.048 44.000 2.46 2.03 0.00 3.13
3862 3911 5.564259 GCAGGAGAATATGATGCATGGTTTC 60.564 44.000 2.46 2.03 36.88 2.78
3863 3912 4.280174 GCAGGAGAATATGATGCATGGTTT 59.720 41.667 2.46 0.00 36.88 3.27
3864 3913 3.825014 GCAGGAGAATATGATGCATGGTT 59.175 43.478 2.46 0.00 36.88 3.67
3865 3914 3.418995 GCAGGAGAATATGATGCATGGT 58.581 45.455 2.46 0.00 36.88 3.55
3866 3915 2.418976 CGCAGGAGAATATGATGCATGG 59.581 50.000 2.46 0.00 36.70 3.66
3867 3916 3.332034 TCGCAGGAGAATATGATGCATG 58.668 45.455 2.46 0.00 36.70 4.06
3868 3917 3.690475 TCGCAGGAGAATATGATGCAT 57.310 42.857 0.00 0.00 36.70 3.96
3869 3918 3.332034 CATCGCAGGAGAATATGATGCA 58.668 45.455 0.00 0.00 36.70 3.96
3871 3920 2.676839 GGCATCGCAGGAGAATATGATG 59.323 50.000 0.00 0.00 37.01 3.07
3872 3921 2.676176 CGGCATCGCAGGAGAATATGAT 60.676 50.000 0.00 0.00 0.00 2.45
3873 3922 1.337167 CGGCATCGCAGGAGAATATGA 60.337 52.381 0.00 0.00 0.00 2.15
3874 3923 1.073964 CGGCATCGCAGGAGAATATG 58.926 55.000 0.00 0.00 0.00 1.78
3875 3924 0.681733 ACGGCATCGCAGGAGAATAT 59.318 50.000 0.00 0.00 40.63 1.28
3876 3925 0.464036 AACGGCATCGCAGGAGAATA 59.536 50.000 0.00 0.00 40.63 1.75
3877 3926 0.392998 AAACGGCATCGCAGGAGAAT 60.393 50.000 0.00 0.00 40.63 2.40
3878 3927 1.003839 AAACGGCATCGCAGGAGAA 60.004 52.632 0.00 0.00 40.63 2.87
3879 3928 1.741401 CAAACGGCATCGCAGGAGA 60.741 57.895 0.00 0.00 40.63 3.71
3880 3929 2.753966 CCAAACGGCATCGCAGGAG 61.754 63.158 0.00 0.00 40.63 3.69
3881 3930 2.745884 CCAAACGGCATCGCAGGA 60.746 61.111 0.00 0.00 40.63 3.86
3891 3940 4.974721 ACTGCCCCAGCCAAACGG 62.975 66.667 0.00 0.00 38.69 4.44
3892 3941 2.498056 AAACTGCCCCAGCCAAACG 61.498 57.895 0.00 0.00 38.69 3.60
3893 3942 1.069596 CAAACTGCCCCAGCCAAAC 59.930 57.895 0.00 0.00 38.69 2.93
3894 3943 2.139484 CCAAACTGCCCCAGCCAAA 61.139 57.895 0.00 0.00 38.69 3.28
3895 3944 2.523902 CCAAACTGCCCCAGCCAA 60.524 61.111 0.00 0.00 38.69 4.52
3896 3945 4.619320 CCCAAACTGCCCCAGCCA 62.619 66.667 0.00 0.00 38.69 4.75
3898 3947 3.583882 TAGCCCAAACTGCCCCAGC 62.584 63.158 0.00 0.00 34.37 4.85
3899 3948 0.967380 CTTAGCCCAAACTGCCCCAG 60.967 60.000 0.00 0.00 37.52 4.45
3900 3949 1.076549 CTTAGCCCAAACTGCCCCA 59.923 57.895 0.00 0.00 0.00 4.96
3901 3950 2.351244 GCTTAGCCCAAACTGCCCC 61.351 63.158 0.00 0.00 0.00 5.80
3902 3951 1.304464 AGCTTAGCCCAAACTGCCC 60.304 57.895 0.00 0.00 0.00 5.36
3903 3952 1.598701 CCAGCTTAGCCCAAACTGCC 61.599 60.000 0.00 0.00 0.00 4.85
3904 3953 1.598701 CCCAGCTTAGCCCAAACTGC 61.599 60.000 0.00 0.00 0.00 4.40
3905 3954 0.038166 TCCCAGCTTAGCCCAAACTG 59.962 55.000 0.00 0.00 0.00 3.16
3906 3955 0.038310 GTCCCAGCTTAGCCCAAACT 59.962 55.000 0.00 0.00 0.00 2.66
3907 3956 0.038310 AGTCCCAGCTTAGCCCAAAC 59.962 55.000 0.00 0.00 0.00 2.93
3908 3957 0.777446 AAGTCCCAGCTTAGCCCAAA 59.223 50.000 0.00 0.00 0.00 3.28
3909 3958 0.328258 GAAGTCCCAGCTTAGCCCAA 59.672 55.000 0.00 0.00 0.00 4.12
3910 3959 0.840288 TGAAGTCCCAGCTTAGCCCA 60.840 55.000 0.00 0.00 0.00 5.36
3911 3960 0.393132 GTGAAGTCCCAGCTTAGCCC 60.393 60.000 0.00 0.00 0.00 5.19
3912 3961 0.393132 GGTGAAGTCCCAGCTTAGCC 60.393 60.000 0.00 0.00 0.00 3.93
3913 3962 0.324943 TGGTGAAGTCCCAGCTTAGC 59.675 55.000 0.00 0.00 35.71 3.09
3914 3963 2.393271 CTGGTGAAGTCCCAGCTTAG 57.607 55.000 0.00 0.00 42.81 2.18
3920 3969 1.053835 TGCTGTCTGGTGAAGTCCCA 61.054 55.000 0.00 0.00 0.00 4.37
3921 3970 0.321122 CTGCTGTCTGGTGAAGTCCC 60.321 60.000 0.00 0.00 0.00 4.46
3922 3971 0.394565 ACTGCTGTCTGGTGAAGTCC 59.605 55.000 0.00 0.00 0.00 3.85
3923 3972 3.194542 AGATACTGCTGTCTGGTGAAGTC 59.805 47.826 0.00 0.00 0.00 3.01
3924 3973 3.169099 AGATACTGCTGTCTGGTGAAGT 58.831 45.455 0.00 0.00 0.00 3.01
3925 3974 3.883830 AGATACTGCTGTCTGGTGAAG 57.116 47.619 0.00 0.00 0.00 3.02
3926 3975 4.318332 CAAAGATACTGCTGTCTGGTGAA 58.682 43.478 0.00 0.00 0.00 3.18
3927 3976 3.306989 CCAAAGATACTGCTGTCTGGTGA 60.307 47.826 0.00 0.00 0.00 4.02
3928 3977 3.005554 CCAAAGATACTGCTGTCTGGTG 58.994 50.000 0.00 0.00 0.00 4.17
3929 3978 2.616510 GCCAAAGATACTGCTGTCTGGT 60.617 50.000 0.00 0.00 0.00 4.00
3930 3979 2.012673 GCCAAAGATACTGCTGTCTGG 58.987 52.381 0.00 2.41 0.00 3.86
3931 3980 2.012673 GGCCAAAGATACTGCTGTCTG 58.987 52.381 0.00 0.00 0.00 3.51
3932 3981 1.406069 CGGCCAAAGATACTGCTGTCT 60.406 52.381 2.24 0.00 0.00 3.41
3933 3982 1.009829 CGGCCAAAGATACTGCTGTC 58.990 55.000 2.24 0.00 0.00 3.51
3934 3983 1.026718 GCGGCCAAAGATACTGCTGT 61.027 55.000 2.24 0.66 32.83 4.40
3935 3984 1.026182 TGCGGCCAAAGATACTGCTG 61.026 55.000 2.24 0.00 36.63 4.41
3936 3985 0.745845 CTGCGGCCAAAGATACTGCT 60.746 55.000 2.24 0.00 36.63 4.24
3937 3986 1.723870 CTGCGGCCAAAGATACTGC 59.276 57.895 2.24 0.00 36.21 4.40
3938 3987 0.745845 AGCTGCGGCCAAAGATACTG 60.746 55.000 15.55 0.00 39.73 2.74
3939 3988 0.462759 GAGCTGCGGCCAAAGATACT 60.463 55.000 15.55 0.00 39.73 2.12
3940 3989 0.744414 TGAGCTGCGGCCAAAGATAC 60.744 55.000 15.55 0.00 39.73 2.24
3941 3990 0.462581 CTGAGCTGCGGCCAAAGATA 60.463 55.000 15.55 0.00 39.73 1.98
3942 3991 1.748122 CTGAGCTGCGGCCAAAGAT 60.748 57.895 15.55 0.00 39.73 2.40
3943 3992 2.359107 CTGAGCTGCGGCCAAAGA 60.359 61.111 15.55 0.00 39.73 2.52
3944 3993 3.437795 CCTGAGCTGCGGCCAAAG 61.438 66.667 15.55 9.32 39.73 2.77
3945 3994 3.490031 TTCCTGAGCTGCGGCCAAA 62.490 57.895 15.55 1.63 39.73 3.28
3946 3995 3.952508 TTCCTGAGCTGCGGCCAA 61.953 61.111 15.55 1.01 39.73 4.52
3947 3996 4.704833 GTTCCTGAGCTGCGGCCA 62.705 66.667 15.55 11.17 39.73 5.36
3948 3997 4.400961 AGTTCCTGAGCTGCGGCC 62.401 66.667 15.55 6.47 39.73 6.13
3949 3998 3.123620 CAGTTCCTGAGCTGCGGC 61.124 66.667 10.33 10.33 33.08 6.53
3953 4002 1.134461 AGCATAGCAGTTCCTGAGCTG 60.134 52.381 6.64 6.64 41.74 4.24
3954 4003 1.138661 GAGCATAGCAGTTCCTGAGCT 59.861 52.381 0.00 0.00 42.14 4.09
3955 4004 1.138661 AGAGCATAGCAGTTCCTGAGC 59.861 52.381 0.00 0.00 32.44 4.26
3956 4005 2.429971 TCAGAGCATAGCAGTTCCTGAG 59.570 50.000 0.00 0.00 32.44 3.35
3957 4006 2.460669 TCAGAGCATAGCAGTTCCTGA 58.539 47.619 0.00 0.00 32.44 3.86
3958 4007 2.935201 GTTCAGAGCATAGCAGTTCCTG 59.065 50.000 0.00 0.00 34.12 3.86
3959 4008 2.568956 TGTTCAGAGCATAGCAGTTCCT 59.431 45.455 0.00 0.00 0.00 3.36
3960 4009 2.977914 TGTTCAGAGCATAGCAGTTCC 58.022 47.619 0.00 0.00 0.00 3.62
3961 4010 3.181512 GCTTGTTCAGAGCATAGCAGTTC 60.182 47.826 13.04 0.00 39.89 3.01
3962 4011 2.746362 GCTTGTTCAGAGCATAGCAGTT 59.254 45.455 13.04 0.00 39.89 3.16
3963 4012 2.289882 TGCTTGTTCAGAGCATAGCAGT 60.290 45.455 15.28 0.00 44.63 4.40
3964 4013 2.353323 TGCTTGTTCAGAGCATAGCAG 58.647 47.619 15.28 1.14 44.63 4.24
3965 4014 2.477845 TGCTTGTTCAGAGCATAGCA 57.522 45.000 15.28 15.28 44.63 3.49
3971 4020 1.949525 TGGTTCTTGCTTGTTCAGAGC 59.050 47.619 0.00 0.00 40.53 4.09
3972 4021 2.032549 CGTGGTTCTTGCTTGTTCAGAG 60.033 50.000 0.00 0.00 0.00 3.35
3973 4022 1.939934 CGTGGTTCTTGCTTGTTCAGA 59.060 47.619 0.00 0.00 0.00 3.27
3974 4023 1.597937 GCGTGGTTCTTGCTTGTTCAG 60.598 52.381 0.00 0.00 0.00 3.02
3975 4024 0.380378 GCGTGGTTCTTGCTTGTTCA 59.620 50.000 0.00 0.00 0.00 3.18
3976 4025 0.380378 TGCGTGGTTCTTGCTTGTTC 59.620 50.000 0.00 0.00 0.00 3.18
3977 4026 1.032014 ATGCGTGGTTCTTGCTTGTT 58.968 45.000 0.00 0.00 0.00 2.83
3978 4027 0.311790 CATGCGTGGTTCTTGCTTGT 59.688 50.000 0.00 0.00 0.00 3.16
3979 4028 0.387622 CCATGCGTGGTTCTTGCTTG 60.388 55.000 17.42 0.00 40.83 4.01
3980 4029 0.537143 TCCATGCGTGGTTCTTGCTT 60.537 50.000 24.24 0.00 46.16 3.91
3981 4030 0.537143 TTCCATGCGTGGTTCTTGCT 60.537 50.000 24.24 0.00 46.16 3.91
3982 4031 0.109597 CTTCCATGCGTGGTTCTTGC 60.110 55.000 24.24 0.00 46.16 4.01
3983 4032 1.197721 GTCTTCCATGCGTGGTTCTTG 59.802 52.381 24.24 11.00 46.16 3.02
3984 4033 1.072331 AGTCTTCCATGCGTGGTTCTT 59.928 47.619 24.24 5.50 46.16 2.52
3985 4034 0.687354 AGTCTTCCATGCGTGGTTCT 59.313 50.000 24.24 14.54 46.16 3.01
3986 4035 2.380084 TAGTCTTCCATGCGTGGTTC 57.620 50.000 24.24 12.71 46.16 3.62
3987 4036 2.632377 CATAGTCTTCCATGCGTGGTT 58.368 47.619 24.24 8.93 46.16 3.67
3988 4037 1.134401 CCATAGTCTTCCATGCGTGGT 60.134 52.381 24.24 7.54 46.16 4.16
3990 4039 0.940126 GCCATAGTCTTCCATGCGTG 59.060 55.000 0.00 0.00 0.00 5.34
3991 4040 0.541392 TGCCATAGTCTTCCATGCGT 59.459 50.000 0.00 0.00 0.00 5.24
3992 4041 0.940126 GTGCCATAGTCTTCCATGCG 59.060 55.000 0.00 0.00 0.00 4.73
3993 4042 0.940126 CGTGCCATAGTCTTCCATGC 59.060 55.000 0.00 0.00 0.00 4.06
3994 4043 1.935873 CACGTGCCATAGTCTTCCATG 59.064 52.381 0.82 0.00 0.00 3.66
3995 4044 1.743772 GCACGTGCCATAGTCTTCCAT 60.744 52.381 30.12 0.00 34.31 3.41
3996 4045 0.391130 GCACGTGCCATAGTCTTCCA 60.391 55.000 30.12 0.00 34.31 3.53
3997 4046 0.108138 AGCACGTGCCATAGTCTTCC 60.108 55.000 35.51 5.06 43.38 3.46
3998 4047 1.002366 CAGCACGTGCCATAGTCTTC 58.998 55.000 35.51 5.62 43.38 2.87
3999 4048 0.321671 ACAGCACGTGCCATAGTCTT 59.678 50.000 35.51 13.05 43.38 3.01
4000 4049 0.321671 AACAGCACGTGCCATAGTCT 59.678 50.000 35.51 13.87 43.38 3.24
4001 4050 1.135972 CAAACAGCACGTGCCATAGTC 60.136 52.381 35.51 7.99 43.38 2.59
4002 4051 0.874390 CAAACAGCACGTGCCATAGT 59.126 50.000 35.51 24.94 43.38 2.12
4003 4052 0.454957 GCAAACAGCACGTGCCATAG 60.455 55.000 35.51 24.30 44.79 2.23
4004 4053 1.578926 GCAAACAGCACGTGCCATA 59.421 52.632 35.51 0.00 44.79 2.74
4005 4054 2.336088 GCAAACAGCACGTGCCAT 59.664 55.556 35.51 22.01 44.79 4.40
4029 4078 1.674221 GCAGTCCACAAGGCTACAGAG 60.674 57.143 0.00 0.00 33.74 3.35
4030 4079 0.321671 GCAGTCCACAAGGCTACAGA 59.678 55.000 0.00 0.00 33.74 3.41
4031 4080 0.674895 GGCAGTCCACAAGGCTACAG 60.675 60.000 0.00 0.00 33.74 2.74
4032 4081 1.374947 GGCAGTCCACAAGGCTACA 59.625 57.895 0.00 0.00 33.74 2.74
4033 4082 0.674895 CTGGCAGTCCACAAGGCTAC 60.675 60.000 6.28 0.00 37.47 3.58
4034 4083 0.835971 TCTGGCAGTCCACAAGGCTA 60.836 55.000 15.27 0.00 37.47 3.93
4035 4084 1.708993 TTCTGGCAGTCCACAAGGCT 61.709 55.000 15.27 0.00 37.47 4.58
4036 4085 0.823356 TTTCTGGCAGTCCACAAGGC 60.823 55.000 15.27 0.00 37.47 4.35
4037 4086 0.954452 GTTTCTGGCAGTCCACAAGG 59.046 55.000 15.27 0.00 37.47 3.61
4038 4087 0.588252 CGTTTCTGGCAGTCCACAAG 59.412 55.000 15.27 0.00 37.47 3.16
4039 4088 1.444119 GCGTTTCTGGCAGTCCACAA 61.444 55.000 15.27 0.00 37.47 3.33
4040 4089 1.891919 GCGTTTCTGGCAGTCCACA 60.892 57.895 15.27 0.00 37.47 4.17
4041 4090 1.891919 TGCGTTTCTGGCAGTCCAC 60.892 57.895 15.27 8.69 37.47 4.02
4042 4091 1.891919 GTGCGTTTCTGGCAGTCCA 60.892 57.895 15.27 3.09 41.83 4.02
4043 4092 2.946762 GTGCGTTTCTGGCAGTCC 59.053 61.111 15.27 2.70 41.83 3.85
4044 4093 2.551270 CGTGCGTTTCTGGCAGTC 59.449 61.111 15.27 5.78 41.83 3.51
4045 4094 2.731691 ATCCGTGCGTTTCTGGCAGT 62.732 55.000 15.27 0.00 41.83 4.40
4046 4095 1.970917 GATCCGTGCGTTTCTGGCAG 61.971 60.000 8.58 8.58 41.83 4.85
4047 4096 2.031919 ATCCGTGCGTTTCTGGCA 59.968 55.556 0.00 0.00 38.25 4.92
4048 4097 1.298859 AAGATCCGTGCGTTTCTGGC 61.299 55.000 0.00 0.00 0.00 4.85
4049 4098 1.135972 CAAAGATCCGTGCGTTTCTGG 60.136 52.381 0.00 0.00 0.00 3.86
4050 4099 1.798223 TCAAAGATCCGTGCGTTTCTG 59.202 47.619 0.00 0.00 0.00 3.02
4051 4100 1.798813 GTCAAAGATCCGTGCGTTTCT 59.201 47.619 0.00 0.00 0.00 2.52
4052 4101 1.529438 TGTCAAAGATCCGTGCGTTTC 59.471 47.619 0.00 0.00 0.00 2.78
4053 4102 1.531149 CTGTCAAAGATCCGTGCGTTT 59.469 47.619 0.00 0.00 0.00 3.60
4054 4103 1.148310 CTGTCAAAGATCCGTGCGTT 58.852 50.000 0.00 0.00 0.00 4.84
4055 4104 0.670546 CCTGTCAAAGATCCGTGCGT 60.671 55.000 0.00 0.00 0.00 5.24
4056 4105 0.389817 TCCTGTCAAAGATCCGTGCG 60.390 55.000 0.00 0.00 0.00 5.34
4057 4106 1.464997 GTTCCTGTCAAAGATCCGTGC 59.535 52.381 0.00 0.00 0.00 5.34
4058 4107 2.996621 GAGTTCCTGTCAAAGATCCGTG 59.003 50.000 0.00 0.00 0.00 4.94
4059 4108 2.028020 GGAGTTCCTGTCAAAGATCCGT 60.028 50.000 0.00 0.00 0.00 4.69
4060 4109 2.234908 AGGAGTTCCTGTCAAAGATCCG 59.765 50.000 0.00 0.00 46.55 4.18
4061 4110 3.990959 AGGAGTTCCTGTCAAAGATCC 57.009 47.619 0.00 0.00 46.55 3.36
4073 4122 2.352805 CAGCACCCCAGGAGTTCC 59.647 66.667 0.00 0.00 0.00 3.62
4074 4123 2.352805 CCAGCACCCCAGGAGTTC 59.647 66.667 0.00 0.00 0.00 3.01
4075 4124 3.971702 GCCAGCACCCCAGGAGTT 61.972 66.667 0.00 0.00 0.00 3.01
4090 4139 4.853580 CAATTTCCTTGAAGGCACGGCC 62.854 54.545 6.30 6.80 42.56 6.13
4091 4140 0.603065 AATTTCCTTGAAGGCACGGC 59.397 50.000 6.30 0.00 34.61 5.68
4092 4141 1.669795 GCAATTTCCTTGAAGGCACGG 60.670 52.381 6.30 0.00 36.97 4.94
4093 4142 1.270550 AGCAATTTCCTTGAAGGCACG 59.729 47.619 6.30 0.00 36.97 5.34
4094 4143 2.297033 TCAGCAATTTCCTTGAAGGCAC 59.703 45.455 6.30 0.00 36.97 5.01
4095 4144 2.297033 GTCAGCAATTTCCTTGAAGGCA 59.703 45.455 6.30 0.00 36.97 4.75
4096 4145 2.353109 GGTCAGCAATTTCCTTGAAGGC 60.353 50.000 6.30 0.00 36.97 4.35
4097 4146 3.160269 AGGTCAGCAATTTCCTTGAAGG 58.840 45.455 4.45 4.45 36.97 3.46
4098 4147 4.522022 AGAAGGTCAGCAATTTCCTTGAAG 59.478 41.667 0.00 0.00 39.91 3.02
4099 4148 4.473444 AGAAGGTCAGCAATTTCCTTGAA 58.527 39.130 0.00 0.00 39.91 2.69
4100 4149 4.074970 GAGAAGGTCAGCAATTTCCTTGA 58.925 43.478 0.00 0.00 39.91 3.02
4101 4150 3.822735 TGAGAAGGTCAGCAATTTCCTTG 59.177 43.478 0.00 0.00 39.91 3.61
4102 4151 4.104383 TGAGAAGGTCAGCAATTTCCTT 57.896 40.909 0.00 0.00 42.10 3.36
4103 4152 3.795688 TGAGAAGGTCAGCAATTTCCT 57.204 42.857 0.00 0.00 0.00 3.36
4104 4153 3.057245 GGTTGAGAAGGTCAGCAATTTCC 60.057 47.826 0.00 0.00 38.12 3.13
4105 4154 3.823304 AGGTTGAGAAGGTCAGCAATTTC 59.177 43.478 0.00 0.00 38.12 2.17
4106 4155 3.837355 AGGTTGAGAAGGTCAGCAATTT 58.163 40.909 0.00 0.00 38.12 1.82
4107 4156 3.515602 AGGTTGAGAAGGTCAGCAATT 57.484 42.857 0.00 0.00 38.12 2.32
4108 4157 4.521146 CATAGGTTGAGAAGGTCAGCAAT 58.479 43.478 0.00 0.00 38.12 3.56
4109 4158 3.307691 CCATAGGTTGAGAAGGTCAGCAA 60.308 47.826 0.00 0.00 38.12 3.91
4110 4159 2.237143 CCATAGGTTGAGAAGGTCAGCA 59.763 50.000 0.00 0.00 38.12 4.41
4111 4160 2.501723 TCCATAGGTTGAGAAGGTCAGC 59.498 50.000 0.00 0.00 36.21 4.26
4112 4161 3.431486 GCTCCATAGGTTGAGAAGGTCAG 60.431 52.174 0.00 0.00 36.21 3.51
4113 4162 2.501723 GCTCCATAGGTTGAGAAGGTCA 59.498 50.000 0.00 0.00 0.00 4.02
4114 4163 2.501723 TGCTCCATAGGTTGAGAAGGTC 59.498 50.000 0.00 0.00 0.00 3.85
4115 4164 2.551270 TGCTCCATAGGTTGAGAAGGT 58.449 47.619 0.00 0.00 0.00 3.50
4116 4165 3.474600 CATGCTCCATAGGTTGAGAAGG 58.525 50.000 0.00 0.00 0.00 3.46
4117 4166 2.877168 GCATGCTCCATAGGTTGAGAAG 59.123 50.000 11.37 0.00 0.00 2.85
4118 4167 2.742856 CGCATGCTCCATAGGTTGAGAA 60.743 50.000 17.13 0.00 0.00 2.87
4119 4168 1.202568 CGCATGCTCCATAGGTTGAGA 60.203 52.381 17.13 0.00 0.00 3.27
4120 4169 1.202568 TCGCATGCTCCATAGGTTGAG 60.203 52.381 17.13 0.00 0.00 3.02
4121 4170 0.829990 TCGCATGCTCCATAGGTTGA 59.170 50.000 17.13 0.00 0.00 3.18
4122 4171 1.224075 CTCGCATGCTCCATAGGTTG 58.776 55.000 17.13 0.00 0.00 3.77
4123 4172 0.533755 GCTCGCATGCTCCATAGGTT 60.534 55.000 17.13 0.00 0.00 3.50
4124 4173 1.070445 GCTCGCATGCTCCATAGGT 59.930 57.895 17.13 0.00 0.00 3.08
4125 4174 1.370437 AGCTCGCATGCTCCATAGG 59.630 57.895 17.13 0.00 39.34 2.57
4132 4181 3.423162 GGAGACGAGCTCGCATGCT 62.423 63.158 34.83 25.12 44.91 3.79
4133 4182 2.959071 GGAGACGAGCTCGCATGC 60.959 66.667 34.83 24.17 44.91 4.06
4134 4183 1.588403 CTGGAGACGAGCTCGCATG 60.588 63.158 34.83 15.52 44.91 4.06
4135 4184 2.804167 CTGGAGACGAGCTCGCAT 59.196 61.111 34.83 23.77 44.91 4.73
4136 4185 4.121669 GCTGGAGACGAGCTCGCA 62.122 66.667 34.83 22.73 44.91 5.10
4137 4186 4.863925 GGCTGGAGACGAGCTCGC 62.864 72.222 34.83 25.90 44.91 5.03
4149 4198 0.249657 GCAGTTCTCTATCCGGCTGG 60.250 60.000 4.71 4.71 0.00 4.85
4150 4199 0.749649 AGCAGTTCTCTATCCGGCTG 59.250 55.000 0.00 0.00 0.00 4.85
4151 4200 1.957877 GTAGCAGTTCTCTATCCGGCT 59.042 52.381 0.00 0.00 0.00 5.52
4152 4201 1.957877 AGTAGCAGTTCTCTATCCGGC 59.042 52.381 0.00 0.00 0.00 6.13
4153 4202 2.287909 GCAGTAGCAGTTCTCTATCCGG 60.288 54.545 0.00 0.00 41.58 5.14
4154 4203 3.006659 GCAGTAGCAGTTCTCTATCCG 57.993 52.381 0.00 0.00 41.58 4.18
4167 4216 0.179097 GACTAGCCCAGTGCAGTAGC 60.179 60.000 7.49 7.49 44.83 3.58
4168 4217 1.135915 CAGACTAGCCCAGTGCAGTAG 59.864 57.143 0.00 0.00 44.83 2.57
4169 4218 1.186200 CAGACTAGCCCAGTGCAGTA 58.814 55.000 0.00 0.00 44.83 2.74
4170 4219 0.833834 ACAGACTAGCCCAGTGCAGT 60.834 55.000 0.00 0.00 44.83 4.40
4171 4220 0.322975 AACAGACTAGCCCAGTGCAG 59.677 55.000 0.00 0.00 44.83 4.41
4172 4221 0.321671 GAACAGACTAGCCCAGTGCA 59.678 55.000 0.00 0.00 44.83 4.57
4173 4222 0.610687 AGAACAGACTAGCCCAGTGC 59.389 55.000 0.00 0.00 37.72 4.40
4174 4223 1.205893 GGAGAACAGACTAGCCCAGTG 59.794 57.143 0.00 0.00 37.72 3.66
4175 4224 1.562783 GGAGAACAGACTAGCCCAGT 58.437 55.000 0.00 0.00 41.47 4.00
4176 4225 0.457851 CGGAGAACAGACTAGCCCAG 59.542 60.000 0.00 0.00 0.00 4.45
4177 4226 1.605058 GCGGAGAACAGACTAGCCCA 61.605 60.000 0.00 0.00 0.00 5.36
4178 4227 1.142097 GCGGAGAACAGACTAGCCC 59.858 63.158 0.00 0.00 0.00 5.19
4179 4228 1.065851 GTAGCGGAGAACAGACTAGCC 59.934 57.143 0.00 0.00 0.00 3.93
4180 4229 2.018515 AGTAGCGGAGAACAGACTAGC 58.981 52.381 0.00 0.00 0.00 3.42
4181 4230 5.731126 GCTTAAGTAGCGGAGAACAGACTAG 60.731 48.000 4.02 0.00 40.71 2.57
4182 4231 4.096081 GCTTAAGTAGCGGAGAACAGACTA 59.904 45.833 4.02 0.00 40.71 2.59
4183 4232 3.119424 GCTTAAGTAGCGGAGAACAGACT 60.119 47.826 4.02 0.00 40.71 3.24
4184 4233 3.180613 GCTTAAGTAGCGGAGAACAGAC 58.819 50.000 4.02 0.00 40.71 3.51
4185 4234 3.505464 GCTTAAGTAGCGGAGAACAGA 57.495 47.619 4.02 0.00 40.71 3.41
4196 4245 2.699321 GGAGGGGGTACAGCTTAAGTAG 59.301 54.545 4.02 0.00 0.00 2.57
4197 4246 2.627753 GGGAGGGGGTACAGCTTAAGTA 60.628 54.545 4.02 0.00 0.00 2.24
4198 4247 1.581223 GGAGGGGGTACAGCTTAAGT 58.419 55.000 4.02 0.00 0.00 2.24
4199 4248 0.837940 GGGAGGGGGTACAGCTTAAG 59.162 60.000 0.00 0.00 0.00 1.85
4200 4249 0.622446 GGGGAGGGGGTACAGCTTAA 60.622 60.000 0.00 0.00 0.00 1.85
4201 4250 1.003835 GGGGAGGGGGTACAGCTTA 59.996 63.158 0.00 0.00 0.00 3.09
4202 4251 2.286197 GGGGAGGGGGTACAGCTT 60.286 66.667 0.00 0.00 0.00 3.74
4203 4252 4.433194 GGGGGAGGGGGTACAGCT 62.433 72.222 0.00 0.00 0.00 4.24
4218 4267 2.821969 CAGAAAACAGAGAACATGGGGG 59.178 50.000 0.00 0.00 0.00 5.40
4219 4268 2.229784 GCAGAAAACAGAGAACATGGGG 59.770 50.000 0.00 0.00 0.00 4.96
4220 4269 3.152341 AGCAGAAAACAGAGAACATGGG 58.848 45.455 0.00 0.00 0.00 4.00
4221 4270 4.070716 AGAGCAGAAAACAGAGAACATGG 58.929 43.478 0.00 0.00 0.00 3.66
4222 4271 4.996122 AGAGAGCAGAAAACAGAGAACATG 59.004 41.667 0.00 0.00 0.00 3.21
4223 4272 4.996122 CAGAGAGCAGAAAACAGAGAACAT 59.004 41.667 0.00 0.00 0.00 2.71
4224 4273 4.100035 TCAGAGAGCAGAAAACAGAGAACA 59.900 41.667 0.00 0.00 0.00 3.18
4225 4274 4.626042 TCAGAGAGCAGAAAACAGAGAAC 58.374 43.478 0.00 0.00 0.00 3.01
4226 4275 4.944619 TCAGAGAGCAGAAAACAGAGAA 57.055 40.909 0.00 0.00 0.00 2.87
4227 4276 4.322574 CCATCAGAGAGCAGAAAACAGAGA 60.323 45.833 0.00 0.00 0.00 3.10
4228 4277 3.933955 CCATCAGAGAGCAGAAAACAGAG 59.066 47.826 0.00 0.00 0.00 3.35
4229 4278 3.326006 ACCATCAGAGAGCAGAAAACAGA 59.674 43.478 0.00 0.00 0.00 3.41
4230 4279 3.672808 ACCATCAGAGAGCAGAAAACAG 58.327 45.455 0.00 0.00 0.00 3.16
4231 4280 3.777106 ACCATCAGAGAGCAGAAAACA 57.223 42.857 0.00 0.00 0.00 2.83
4232 4281 4.320788 CCAAACCATCAGAGAGCAGAAAAC 60.321 45.833 0.00 0.00 0.00 2.43
4233 4282 3.822735 CCAAACCATCAGAGAGCAGAAAA 59.177 43.478 0.00 0.00 0.00 2.29
4234 4283 3.181440 ACCAAACCATCAGAGAGCAGAAA 60.181 43.478 0.00 0.00 0.00 2.52
4235 4284 2.373169 ACCAAACCATCAGAGAGCAGAA 59.627 45.455 0.00 0.00 0.00 3.02
4236 4285 1.980765 ACCAAACCATCAGAGAGCAGA 59.019 47.619 0.00 0.00 0.00 4.26
4237 4286 2.082231 CACCAAACCATCAGAGAGCAG 58.918 52.381 0.00 0.00 0.00 4.24
4238 4287 1.699083 TCACCAAACCATCAGAGAGCA 59.301 47.619 0.00 0.00 0.00 4.26
4239 4288 2.479566 TCACCAAACCATCAGAGAGC 57.520 50.000 0.00 0.00 0.00 4.09
4240 4289 3.276857 CCATCACCAAACCATCAGAGAG 58.723 50.000 0.00 0.00 0.00 3.20
4241 4290 2.618816 GCCATCACCAAACCATCAGAGA 60.619 50.000 0.00 0.00 0.00 3.10
4242 4291 1.747355 GCCATCACCAAACCATCAGAG 59.253 52.381 0.00 0.00 0.00 3.35
4243 4292 1.616725 GGCCATCACCAAACCATCAGA 60.617 52.381 0.00 0.00 0.00 3.27
4244 4293 0.819582 GGCCATCACCAAACCATCAG 59.180 55.000 0.00 0.00 0.00 2.90
4245 4294 0.113972 TGGCCATCACCAAACCATCA 59.886 50.000 0.00 0.00 36.55 3.07
4246 4295 0.819582 CTGGCCATCACCAAACCATC 59.180 55.000 5.51 0.00 39.86 3.51
4247 4296 1.259840 GCTGGCCATCACCAAACCAT 61.260 55.000 5.51 0.00 39.86 3.55
4248 4297 1.907807 GCTGGCCATCACCAAACCA 60.908 57.895 5.51 0.00 39.86 3.67
4249 4298 1.607467 AGCTGGCCATCACCAAACC 60.607 57.895 5.51 0.00 39.86 3.27
4250 4299 1.588082 CAGCTGGCCATCACCAAAC 59.412 57.895 5.51 0.00 39.86 2.93
4251 4300 2.277591 GCAGCTGGCCATCACCAAA 61.278 57.895 17.12 0.00 39.86 3.28
4252 4301 2.677524 GCAGCTGGCCATCACCAA 60.678 61.111 17.12 0.00 39.86 3.67
4253 4302 3.969119 TGCAGCTGGCCATCACCA 61.969 61.111 17.12 0.00 43.89 4.17
4254 4303 3.446570 GTGCAGCTGGCCATCACC 61.447 66.667 17.12 0.00 43.89 4.02
4255 4304 2.050350 ATGTGCAGCTGGCCATCAC 61.050 57.895 17.12 14.56 43.89 3.06
4256 4305 2.049767 CATGTGCAGCTGGCCATCA 61.050 57.895 17.12 0.71 43.89 3.07
4257 4306 1.601419 AACATGTGCAGCTGGCCATC 61.601 55.000 17.12 0.31 43.89 3.51
4258 4307 1.608336 AACATGTGCAGCTGGCCAT 60.608 52.632 17.12 10.23 43.89 4.40
4259 4308 2.203523 AACATGTGCAGCTGGCCA 60.204 55.556 17.12 4.71 43.89 5.36
4260 4309 2.260434 CAACATGTGCAGCTGGCC 59.740 61.111 17.12 0.00 43.89 5.36
4261 4310 1.372499 CACAACATGTGCAGCTGGC 60.372 57.895 17.12 8.54 41.89 4.85
4262 4311 4.957266 CACAACATGTGCAGCTGG 57.043 55.556 17.12 0.00 41.89 4.85
4270 4319 0.950836 TTAAGCGCTGCACAACATGT 59.049 45.000 12.58 0.00 0.00 3.21
4271 4320 1.330306 GTTAAGCGCTGCACAACATG 58.670 50.000 12.58 0.00 0.00 3.21
4272 4321 0.950836 TGTTAAGCGCTGCACAACAT 59.049 45.000 12.58 0.00 32.47 2.71
4273 4322 0.950836 ATGTTAAGCGCTGCACAACA 59.049 45.000 21.97 21.82 38.28 3.33
4274 4323 1.069296 TGATGTTAAGCGCTGCACAAC 60.069 47.619 21.97 19.69 0.00 3.32
4275 4324 1.069296 GTGATGTTAAGCGCTGCACAA 60.069 47.619 21.97 7.56 0.00 3.33
4276 4325 0.516877 GTGATGTTAAGCGCTGCACA 59.483 50.000 20.78 20.78 0.00 4.57
4277 4326 0.179189 GGTGATGTTAAGCGCTGCAC 60.179 55.000 12.58 11.88 0.00 4.57
4278 4327 0.321564 AGGTGATGTTAAGCGCTGCA 60.322 50.000 12.58 11.66 0.00 4.41
4279 4328 0.804989 AAGGTGATGTTAAGCGCTGC 59.195 50.000 12.58 5.16 0.00 5.25
4280 4329 2.076100 TGAAGGTGATGTTAAGCGCTG 58.924 47.619 12.58 0.00 0.00 5.18
4281 4330 2.472695 TGAAGGTGATGTTAAGCGCT 57.527 45.000 2.64 2.64 0.00 5.92
4282 4331 2.420022 ACATGAAGGTGATGTTAAGCGC 59.580 45.455 0.00 0.00 29.39 5.92
4283 4332 5.794687 TTACATGAAGGTGATGTTAAGCG 57.205 39.130 0.00 0.00 35.62 4.68
4284 4333 7.698130 GTCATTTACATGAAGGTGATGTTAAGC 59.302 37.037 0.00 0.00 41.30 3.09
4285 4334 8.950210 AGTCATTTACATGAAGGTGATGTTAAG 58.050 33.333 0.00 0.00 41.30 1.85
4286 4335 8.862325 AGTCATTTACATGAAGGTGATGTTAA 57.138 30.769 0.00 0.00 41.30 2.01
4287 4336 8.862325 AAGTCATTTACATGAAGGTGATGTTA 57.138 30.769 0.00 0.00 41.30 2.41
4288 4337 7.361201 CGAAGTCATTTACATGAAGGTGATGTT 60.361 37.037 0.00 0.00 41.30 2.71
4289 4338 6.092670 CGAAGTCATTTACATGAAGGTGATGT 59.907 38.462 0.00 0.00 41.30 3.06
4290 4339 6.457392 CCGAAGTCATTTACATGAAGGTGATG 60.457 42.308 0.00 0.00 41.30 3.07
4291 4340 5.586243 CCGAAGTCATTTACATGAAGGTGAT 59.414 40.000 0.00 0.00 41.30 3.06
4292 4341 4.935205 CCGAAGTCATTTACATGAAGGTGA 59.065 41.667 0.00 0.00 41.30 4.02
4293 4342 4.695455 ACCGAAGTCATTTACATGAAGGTG 59.305 41.667 0.00 0.00 41.30 4.00
4294 4343 4.906618 ACCGAAGTCATTTACATGAAGGT 58.093 39.130 0.00 0.00 41.30 3.50
4295 4344 5.631026 CAACCGAAGTCATTTACATGAAGG 58.369 41.667 0.00 0.00 41.30 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.