Multiple sequence alignment - TraesCS2B01G118800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G118800 chr2B 100.000 3482 0 0 1 3482 84968254 84971735 0.000000e+00 6431
1 TraesCS2B01G118800 chr2B 94.286 245 13 1 2111 2355 84817716 84817959 1.180000e-99 374
2 TraesCS2B01G118800 chr2B 82.063 446 56 19 1896 2335 84976776 84977203 3.300000e-95 359
3 TraesCS2B01G118800 chr2B 89.151 212 23 0 1408 1619 84816677 84816888 7.410000e-67 265
4 TraesCS2B01G118800 chr2B 85.043 234 35 0 1383 1616 84976976 84977209 4.490000e-59 239
5 TraesCS2B01G118800 chr2D 89.792 3027 148 72 221 3130 54079187 54076205 0.000000e+00 3729
6 TraesCS2B01G118800 chr2D 92.116 241 19 0 2111 2351 54103323 54103083 1.200000e-89 340
7 TraesCS2B01G118800 chr2A 90.578 2887 134 62 136 2934 54708346 54705510 0.000000e+00 3698
8 TraesCS2B01G118800 chr2A 94.583 240 13 0 2111 2350 54817592 54817353 4.240000e-99 372
9 TraesCS2B01G118800 chr2A 80.717 446 56 23 1896 2335 54702982 54702561 1.560000e-83 320
10 TraesCS2B01G118800 chr2A 89.552 201 21 0 1408 1608 54818637 54818437 4.460000e-64 255
11 TraesCS2B01G118800 chr2A 85.714 231 33 0 1386 1616 54702785 54702555 9.650000e-61 244
12 TraesCS2B01G118800 chr4D 81.340 418 56 12 1381 1798 305054660 305055055 1.560000e-83 320
13 TraesCS2B01G118800 chr4B 81.340 418 56 12 1381 1798 380720438 380720833 1.560000e-83 320
14 TraesCS2B01G118800 chr4B 89.076 238 24 2 2113 2349 380721102 380721338 9.450000e-76 294
15 TraesCS2B01G118800 chr4A 80.861 418 58 12 1381 1798 173932848 173932453 3.380000e-80 309
16 TraesCS2B01G118800 chr1A 88.048 251 28 2 2114 2363 533328724 533328475 2.630000e-76 296


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G118800 chr2B 84968254 84971735 3481 False 6431.000000 6431 100.000000 1 3482 1 chr2B.!!$F1 3481
1 TraesCS2B01G118800 chr2B 84816677 84817959 1282 False 319.500000 374 91.718500 1408 2355 2 chr2B.!!$F2 947
2 TraesCS2B01G118800 chr2D 54076205 54079187 2982 True 3729.000000 3729 89.792000 221 3130 1 chr2D.!!$R1 2909
3 TraesCS2B01G118800 chr2A 54702555 54708346 5791 True 1420.666667 3698 85.669667 136 2934 3 chr2A.!!$R1 2798
4 TraesCS2B01G118800 chr2A 54817353 54818637 1284 True 313.500000 372 92.067500 1408 2350 2 chr2A.!!$R2 942
5 TraesCS2B01G118800 chr4B 380720438 380721338 900 False 307.000000 320 85.208000 1381 2349 2 chr4B.!!$F1 968

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
85 86 0.033642 TACACAACCGCGTTGGATGA 59.966 50.0 20.19 5.45 46.5 2.92 F
1333 1406 0.031043 TCGTCCGTCTTTTGCTTCGA 59.969 50.0 0.00 0.00 0.0 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1366 1439 0.041090 AACACCATCCCCAATCCACC 59.959 55.0 0.00 0.0 0.0 4.61 R
3019 3640 0.590195 GCACAGTGGACTCTTGCTTG 59.410 55.0 1.84 0.0 0.0 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.842732 CAAAACTCCCCCACGTTTATC 57.157 47.619 0.00 0.00 33.36 1.75
21 22 3.418047 CAAAACTCCCCCACGTTTATCT 58.582 45.455 0.00 0.00 33.36 1.98
22 23 3.345508 AAACTCCCCCACGTTTATCTC 57.654 47.619 0.00 0.00 32.05 2.75
23 24 2.249309 ACTCCCCCACGTTTATCTCT 57.751 50.000 0.00 0.00 0.00 3.10
24 25 1.831736 ACTCCCCCACGTTTATCTCTG 59.168 52.381 0.00 0.00 0.00 3.35
25 26 1.139058 CTCCCCCACGTTTATCTCTGG 59.861 57.143 0.00 0.00 0.00 3.86
26 27 0.909623 CCCCCACGTTTATCTCTGGT 59.090 55.000 0.00 0.00 0.00 4.00
27 28 1.280998 CCCCCACGTTTATCTCTGGTT 59.719 52.381 0.00 0.00 0.00 3.67
28 29 2.290705 CCCCCACGTTTATCTCTGGTTT 60.291 50.000 0.00 0.00 0.00 3.27
29 30 2.747446 CCCCACGTTTATCTCTGGTTTG 59.253 50.000 0.00 0.00 0.00 2.93
30 31 2.161609 CCCACGTTTATCTCTGGTTTGC 59.838 50.000 0.00 0.00 0.00 3.68
31 32 2.159707 CCACGTTTATCTCTGGTTTGCG 60.160 50.000 0.00 0.00 0.00 4.85
32 33 1.463444 ACGTTTATCTCTGGTTTGCGC 59.537 47.619 0.00 0.00 0.00 6.09
33 34 1.526986 CGTTTATCTCTGGTTTGCGCG 60.527 52.381 0.00 0.00 0.00 6.86
34 35 1.730064 GTTTATCTCTGGTTTGCGCGA 59.270 47.619 12.10 0.00 0.00 5.87
35 36 1.640428 TTATCTCTGGTTTGCGCGAG 58.360 50.000 12.10 1.64 0.00 5.03
36 37 0.815095 TATCTCTGGTTTGCGCGAGA 59.185 50.000 12.10 11.91 36.99 4.04
37 38 0.037326 ATCTCTGGTTTGCGCGAGAA 60.037 50.000 12.10 0.00 36.26 2.87
38 39 0.249699 TCTCTGGTTTGCGCGAGAAA 60.250 50.000 12.10 4.72 30.20 2.52
39 40 0.586319 CTCTGGTTTGCGCGAGAAAA 59.414 50.000 12.10 3.82 35.91 2.29
45 46 2.031037 TTTGCGCGAGAAAACATGTC 57.969 45.000 12.10 0.00 32.48 3.06
46 47 0.237235 TTGCGCGAGAAAACATGTCC 59.763 50.000 12.10 0.00 0.00 4.02
47 48 1.225745 GCGCGAGAAAACATGTCCG 60.226 57.895 12.10 0.00 0.00 4.79
48 49 1.623081 GCGCGAGAAAACATGTCCGA 61.623 55.000 12.10 0.00 0.00 4.55
49 50 0.787787 CGCGAGAAAACATGTCCGAA 59.212 50.000 0.00 0.00 0.00 4.30
50 51 1.193650 CGCGAGAAAACATGTCCGAAA 59.806 47.619 0.00 0.00 0.00 3.46
51 52 2.571206 GCGAGAAAACATGTCCGAAAC 58.429 47.619 0.00 0.00 0.00 2.78
52 53 2.822827 CGAGAAAACATGTCCGAAACG 58.177 47.619 0.00 0.00 0.00 3.60
53 54 2.571206 GAGAAAACATGTCCGAAACGC 58.429 47.619 0.00 0.00 0.00 4.84
54 55 1.070175 AGAAAACATGTCCGAAACGCG 60.070 47.619 3.53 3.53 40.47 6.01
55 56 0.658897 AAAACATGTCCGAAACGCGT 59.341 45.000 5.58 5.58 38.67 6.01
56 57 0.233848 AAACATGTCCGAAACGCGTC 59.766 50.000 14.44 0.00 38.67 5.19
57 58 1.882682 AACATGTCCGAAACGCGTCG 61.883 55.000 14.44 13.48 40.77 5.12
58 59 3.475774 ATGTCCGAAACGCGTCGC 61.476 61.111 14.44 7.29 39.74 5.19
72 73 3.276109 TCGCGGACCGATACACAA 58.724 55.556 20.50 0.00 41.89 3.33
73 74 1.153978 TCGCGGACCGATACACAAC 60.154 57.895 20.50 0.00 41.89 3.32
74 75 2.162754 CGCGGACCGATACACAACC 61.163 63.158 20.50 0.00 40.02 3.77
75 76 2.162754 GCGGACCGATACACAACCG 61.163 63.158 20.50 0.00 42.63 4.44
76 77 2.162754 CGGACCGATACACAACCGC 61.163 63.158 8.64 0.00 34.36 5.68
77 78 2.162754 GGACCGATACACAACCGCG 61.163 63.158 0.00 0.00 0.00 6.46
78 79 1.444895 GACCGATACACAACCGCGT 60.445 57.895 4.92 0.00 0.00 6.01
79 80 1.005867 ACCGATACACAACCGCGTT 60.006 52.632 4.92 0.00 0.00 4.84
81 82 1.418367 CGATACACAACCGCGTTGG 59.582 57.895 20.19 13.55 46.50 3.77
82 83 1.009903 CGATACACAACCGCGTTGGA 61.010 55.000 20.19 4.41 46.50 3.53
83 84 1.365699 GATACACAACCGCGTTGGAT 58.634 50.000 20.19 8.54 46.50 3.41
84 85 1.062002 GATACACAACCGCGTTGGATG 59.938 52.381 20.19 14.38 46.50 3.51
85 86 0.033642 TACACAACCGCGTTGGATGA 59.966 50.000 20.19 5.45 46.50 2.92
86 87 1.206578 CACAACCGCGTTGGATGAC 59.793 57.895 20.19 0.00 46.50 3.06
87 88 1.070786 ACAACCGCGTTGGATGACT 59.929 52.632 20.19 1.83 46.50 3.41
88 89 0.534203 ACAACCGCGTTGGATGACTT 60.534 50.000 20.19 1.27 46.50 3.01
89 90 0.165944 CAACCGCGTTGGATGACTTC 59.834 55.000 4.92 0.00 42.97 3.01
90 91 0.953960 AACCGCGTTGGATGACTTCC 60.954 55.000 4.92 0.30 45.69 3.46
97 98 2.908796 GGATGACTTCCGGGGTCC 59.091 66.667 20.16 8.40 33.93 4.46
110 111 4.054825 GGTCCGGACGGTTGCGTA 62.055 66.667 27.68 0.00 34.11 4.42
111 112 2.049248 GTCCGGACGGTTGCGTAA 60.049 61.111 20.85 0.00 34.11 3.18
112 113 2.090524 GTCCGGACGGTTGCGTAAG 61.091 63.158 20.85 0.00 34.11 2.34
113 114 2.812178 CCGGACGGTTGCGTAAGG 60.812 66.667 0.00 0.00 34.11 2.69
114 115 2.048877 CGGACGGTTGCGTAAGGT 60.049 61.111 0.00 0.00 38.28 3.50
115 116 1.665599 CGGACGGTTGCGTAAGGTT 60.666 57.895 0.00 0.00 38.28 3.50
116 117 1.223417 CGGACGGTTGCGTAAGGTTT 61.223 55.000 0.00 0.00 38.28 3.27
117 118 1.794512 GGACGGTTGCGTAAGGTTTA 58.205 50.000 0.00 0.00 38.28 2.01
118 119 2.142319 GGACGGTTGCGTAAGGTTTAA 58.858 47.619 0.00 0.00 38.28 1.52
119 120 2.158254 GGACGGTTGCGTAAGGTTTAAG 59.842 50.000 0.00 0.00 38.28 1.85
120 121 2.145536 ACGGTTGCGTAAGGTTTAAGG 58.854 47.619 0.00 0.00 38.28 2.69
121 122 1.465777 CGGTTGCGTAAGGTTTAAGGG 59.534 52.381 0.00 0.00 38.28 3.95
122 123 2.507484 GGTTGCGTAAGGTTTAAGGGT 58.493 47.619 0.00 0.00 38.28 4.34
123 124 2.227149 GGTTGCGTAAGGTTTAAGGGTG 59.773 50.000 0.00 0.00 38.28 4.61
124 125 2.188062 TGCGTAAGGTTTAAGGGTGG 57.812 50.000 0.00 0.00 38.28 4.61
125 126 1.271488 TGCGTAAGGTTTAAGGGTGGG 60.271 52.381 0.00 0.00 38.28 4.61
126 127 1.456296 CGTAAGGTTTAAGGGTGGGC 58.544 55.000 0.00 0.00 0.00 5.36
127 128 1.456296 GTAAGGTTTAAGGGTGGGCG 58.544 55.000 0.00 0.00 0.00 6.13
128 129 1.066471 TAAGGTTTAAGGGTGGGCGT 58.934 50.000 0.00 0.00 0.00 5.68
129 130 0.186630 AAGGTTTAAGGGTGGGCGTT 59.813 50.000 0.00 0.00 0.00 4.84
130 131 0.538746 AGGTTTAAGGGTGGGCGTTG 60.539 55.000 0.00 0.00 0.00 4.10
131 132 1.529152 GGTTTAAGGGTGGGCGTTGG 61.529 60.000 0.00 0.00 0.00 3.77
132 133 1.904378 TTTAAGGGTGGGCGTTGGC 60.904 57.895 0.00 0.00 38.90 4.52
133 134 2.642183 TTTAAGGGTGGGCGTTGGCA 62.642 55.000 0.00 0.00 42.47 4.92
134 135 3.561120 TAAGGGTGGGCGTTGGCAG 62.561 63.158 0.00 0.00 42.47 4.85
143 144 1.376609 GGCGTTGGCAGTAAGGATGG 61.377 60.000 0.00 0.00 42.47 3.51
146 147 1.463674 GTTGGCAGTAAGGATGGGTG 58.536 55.000 0.00 0.00 0.00 4.61
162 163 5.529060 GGATGGGTGCACTAGATTTTCTAAG 59.471 44.000 17.98 0.00 0.00 2.18
192 194 4.644103 ATACTAGAAGAAAACGCCGCTA 57.356 40.909 0.00 0.00 0.00 4.26
194 196 2.991866 ACTAGAAGAAAACGCCGCTAAC 59.008 45.455 0.00 0.00 0.00 2.34
197 199 2.159627 AGAAGAAAACGCCGCTAACATG 59.840 45.455 0.00 0.00 0.00 3.21
203 205 0.458543 ACGCCGCTAACATGAGACAG 60.459 55.000 0.00 0.00 0.00 3.51
209 211 2.862536 CGCTAACATGAGACAGTGGATG 59.137 50.000 0.00 0.00 0.00 3.51
295 297 3.994204 TTGCATGCATACAGCTAATGG 57.006 42.857 23.37 0.00 45.94 3.16
318 320 4.766404 AAGTTAATGCCGAGGAAAACAG 57.234 40.909 0.00 0.00 0.00 3.16
330 332 4.217983 CGAGGAAAACAGTGGAGTAGTAGT 59.782 45.833 0.00 0.00 0.00 2.73
331 333 5.413833 CGAGGAAAACAGTGGAGTAGTAGTA 59.586 44.000 0.00 0.00 0.00 1.82
332 334 6.403418 CGAGGAAAACAGTGGAGTAGTAGTAG 60.403 46.154 0.00 0.00 0.00 2.57
333 335 6.550163 AGGAAAACAGTGGAGTAGTAGTAGA 58.450 40.000 0.00 0.00 0.00 2.59
334 336 7.183460 AGGAAAACAGTGGAGTAGTAGTAGAT 58.817 38.462 0.00 0.00 0.00 1.98
335 337 8.334734 AGGAAAACAGTGGAGTAGTAGTAGATA 58.665 37.037 0.00 0.00 0.00 1.98
370 372 5.248640 CAGAACCTTCCAGTACATTCACAT 58.751 41.667 0.00 0.00 0.00 3.21
380 382 3.684788 AGTACATTCACATCAAACGGCTC 59.315 43.478 0.00 0.00 0.00 4.70
384 401 3.394674 TTCACATCAAACGGCTCTGTA 57.605 42.857 0.00 0.00 0.00 2.74
435 452 4.907809 TCTGACACTAGTAGTACTGCTGT 58.092 43.478 22.20 13.08 0.00 4.40
540 573 6.382570 AGAAGACACTGCTAGGATTAGACAAT 59.617 38.462 0.00 0.00 0.00 2.71
547 580 4.042062 TGCTAGGATTAGACAATGGATGGG 59.958 45.833 0.00 0.00 0.00 4.00
571 604 9.389755 GGGGTGCAAAATACAAAATACATTAAT 57.610 29.630 0.00 0.00 0.00 1.40
589 627 8.506168 ACATTAATTGTACTCCACCAATACAG 57.494 34.615 0.00 0.00 36.57 2.74
599 637 9.284968 GTACTCCACCAATACAGCAATTTATAT 57.715 33.333 0.00 0.00 0.00 0.86
678 716 0.179076 GCAAAACTTTGGCACTGGCT 60.179 50.000 3.97 0.00 40.87 4.75
713 755 2.421424 GCTGTCAATCGAGCCAAAATCT 59.579 45.455 0.00 0.00 0.00 2.40
805 857 4.672024 CGAGCGAGCGTATCCTGTAATTAT 60.672 45.833 0.00 0.00 0.00 1.28
882 939 4.961511 GCGCGTGAGTGGTGGTGA 62.962 66.667 8.43 0.00 43.14 4.02
883 940 3.036084 CGCGTGAGTGGTGGTGAC 61.036 66.667 0.00 0.00 38.12 3.67
884 941 2.421739 GCGTGAGTGGTGGTGACT 59.578 61.111 0.00 0.00 0.00 3.41
885 942 1.956170 GCGTGAGTGGTGGTGACTG 60.956 63.158 0.00 0.00 0.00 3.51
886 943 1.739667 CGTGAGTGGTGGTGACTGA 59.260 57.895 0.00 0.00 0.00 3.41
912 971 1.621992 CTCTGCTCCCCGCTCTATAA 58.378 55.000 0.00 0.00 40.11 0.98
947 1006 1.001517 AGCGCTCTCTCCTCACTCA 60.002 57.895 2.64 0.00 0.00 3.41
957 1016 0.469892 TCCTCACTCACACAGCTCCA 60.470 55.000 0.00 0.00 0.00 3.86
961 1020 0.179048 CACTCACACAGCTCCAACCA 60.179 55.000 0.00 0.00 0.00 3.67
967 1026 1.701847 ACACAGCTCCAACCATTCTCT 59.298 47.619 0.00 0.00 0.00 3.10
1292 1357 0.115745 TCCCACCCCGTAAGTCTTCT 59.884 55.000 0.00 0.00 0.00 2.85
1302 1372 2.351447 CGTAAGTCTTCTGTTCGCTCCA 60.351 50.000 0.00 0.00 0.00 3.86
1325 1398 3.444034 TCAGAATCAGATCGTCCGTCTTT 59.556 43.478 0.00 0.00 0.00 2.52
1327 1400 4.032217 CAGAATCAGATCGTCCGTCTTTTG 59.968 45.833 0.00 0.00 0.00 2.44
1333 1406 0.031043 TCGTCCGTCTTTTGCTTCGA 59.969 50.000 0.00 0.00 0.00 3.71
1360 1433 6.312180 TCGATTGATCTTGAGTTCTTGACATG 59.688 38.462 0.00 0.00 0.00 3.21
1362 1435 3.681417 TGATCTTGAGTTCTTGACATGCG 59.319 43.478 0.00 0.00 0.00 4.73
1366 1439 0.179240 GAGTTCTTGACATGCGCGTG 60.179 55.000 27.53 27.53 0.00 5.34
1367 1440 1.154413 GTTCTTGACATGCGCGTGG 60.154 57.895 31.55 15.11 0.00 4.94
1368 1441 1.596752 TTCTTGACATGCGCGTGGT 60.597 52.632 31.55 17.99 0.00 4.16
1369 1442 1.840630 TTCTTGACATGCGCGTGGTG 61.841 55.000 31.55 18.09 0.00 4.17
1371 1444 3.816367 TTGACATGCGCGTGGTGGA 62.816 57.895 31.55 13.01 0.00 4.02
1372 1445 2.819595 GACATGCGCGTGGTGGAT 60.820 61.111 31.55 11.98 0.00 3.41
1373 1446 2.359850 ACATGCGCGTGGTGGATT 60.360 55.556 31.55 8.46 0.00 3.01
1374 1447 2.100797 CATGCGCGTGGTGGATTG 59.899 61.111 22.09 0.00 0.00 2.67
1375 1448 3.133464 ATGCGCGTGGTGGATTGG 61.133 61.111 8.43 0.00 0.00 3.16
1378 1451 4.402528 CGCGTGGTGGATTGGGGA 62.403 66.667 0.00 0.00 0.00 4.81
1379 1452 2.275418 GCGTGGTGGATTGGGGAT 59.725 61.111 0.00 0.00 0.00 3.85
1381 1454 1.453745 CGTGGTGGATTGGGGATGG 60.454 63.158 0.00 0.00 0.00 3.51
1382 1455 1.697297 GTGGTGGATTGGGGATGGT 59.303 57.895 0.00 0.00 0.00 3.55
1467 1546 3.175710 AAGGACGTGGGCAAGGGT 61.176 61.111 0.00 0.00 0.00 4.34
1811 2025 4.327680 GACTACCAGGTCAATTCTGCTTT 58.672 43.478 0.00 0.00 36.35 3.51
1823 2039 5.702670 TCAATTCTGCTTTCTACTTGACCAG 59.297 40.000 0.00 0.00 0.00 4.00
1853 2073 4.573607 GTCCTTTCTTTTTACCTGTCGTGT 59.426 41.667 0.00 0.00 0.00 4.49
1964 2318 2.349755 GGTACCCTGCCTTCGCAA 59.650 61.111 0.00 0.00 46.66 4.85
1966 2320 0.179468 GGTACCCTGCCTTCGCAATA 59.821 55.000 0.00 0.00 46.66 1.90
2097 2639 2.740981 GCAGTTCTCACCAAGATCTGTG 59.259 50.000 6.82 6.82 46.75 3.66
2351 2907 0.253160 TCCTCCCCTGGTGTAAGCAT 60.253 55.000 0.00 0.00 46.93 3.79
2353 2912 1.141053 CCTCCCCTGGTGTAAGCATAC 59.859 57.143 0.00 0.00 46.93 2.39
2361 2920 4.363999 CTGGTGTAAGCATACTAGCACTC 58.636 47.826 0.25 0.00 46.93 3.51
2363 2922 4.142160 TGGTGTAAGCATACTAGCACTCTG 60.142 45.833 0.25 0.00 40.88 3.35
2376 2935 2.713011 GCACTCTGCTAATTTCGCATG 58.287 47.619 3.04 0.00 40.96 4.06
2377 2936 2.352651 GCACTCTGCTAATTTCGCATGA 59.647 45.455 0.00 3.31 40.96 3.07
2378 2937 3.003068 GCACTCTGCTAATTTCGCATGAT 59.997 43.478 0.00 0.00 40.96 2.45
2379 2938 4.770287 CACTCTGCTAATTTCGCATGATC 58.230 43.478 0.00 0.00 36.70 2.92
2434 3006 2.675519 GCTTCGTGCAGAGATGAGG 58.324 57.895 8.58 0.00 42.31 3.86
2561 3137 2.351244 TAGTCCTCTGCCGCTGGTG 61.351 63.158 0.00 0.00 0.00 4.17
2628 3211 1.785041 AATGGTGTCTGTGTGCGTGC 61.785 55.000 0.00 0.00 0.00 5.34
2633 3216 4.562485 TCTGTGTGCGTGCGTCGT 62.562 61.111 0.00 0.00 42.13 4.34
2634 3217 4.339809 CTGTGTGCGTGCGTCGTG 62.340 66.667 0.00 0.00 42.13 4.35
2636 3219 4.627114 GTGTGCGTGCGTCGTGTG 62.627 66.667 0.00 0.00 42.13 3.82
2638 3221 4.335525 GTGCGTGCGTCGTGTGTC 62.336 66.667 0.00 0.00 42.13 3.67
2644 3227 2.128128 GCGTCGTGTGTCGCTTTG 60.128 61.111 2.35 0.00 46.69 2.77
2648 3231 0.859232 GTCGTGTGTCGCTTTGTGAT 59.141 50.000 0.00 0.00 39.67 3.06
2703 3286 1.548269 GTGTTGGAGAGAGTGAGGAGG 59.452 57.143 0.00 0.00 0.00 4.30
2809 3397 6.265196 TGTGACCTGCATTGTCTATTTTTCTT 59.735 34.615 15.18 0.00 33.83 2.52
2810 3398 7.147976 GTGACCTGCATTGTCTATTTTTCTTT 58.852 34.615 15.18 0.00 33.83 2.52
2843 3431 1.501582 GGCTCACCTATCTTCCACCT 58.498 55.000 0.00 0.00 0.00 4.00
2845 3433 2.239907 GGCTCACCTATCTTCCACCTTT 59.760 50.000 0.00 0.00 0.00 3.11
2861 3449 3.671928 CACCTTTCTCGTACTACGTTTGG 59.328 47.826 8.42 7.59 43.14 3.28
2913 3501 0.250081 TTTTGCCACGCCCAATTTCC 60.250 50.000 0.00 0.00 0.00 3.13
2930 3518 4.380843 TTTCCCAGATCAAACAGGCTTA 57.619 40.909 0.00 0.00 0.00 3.09
2934 3522 4.706476 TCCCAGATCAAACAGGCTTAATTG 59.294 41.667 0.00 0.00 0.00 2.32
2935 3523 4.142093 CCCAGATCAAACAGGCTTAATTGG 60.142 45.833 0.00 0.00 0.00 3.16
2936 3524 4.427312 CAGATCAAACAGGCTTAATTGGC 58.573 43.478 0.00 0.00 0.00 4.52
2955 3543 4.218686 ACCGGGGCCTTGCTTGTT 62.219 61.111 6.32 0.00 0.00 2.83
2956 3544 3.373565 CCGGGGCCTTGCTTGTTC 61.374 66.667 0.84 0.00 0.00 3.18
2957 3545 2.597217 CGGGGCCTTGCTTGTTCA 60.597 61.111 0.84 0.00 0.00 3.18
2958 3546 1.978617 CGGGGCCTTGCTTGTTCAT 60.979 57.895 0.84 0.00 0.00 2.57
2959 3547 1.893062 GGGGCCTTGCTTGTTCATC 59.107 57.895 0.84 0.00 0.00 2.92
2963 3551 2.165998 GGCCTTGCTTGTTCATCTCTT 58.834 47.619 0.00 0.00 0.00 2.85
2967 3555 5.238214 GGCCTTGCTTGTTCATCTCTTATAG 59.762 44.000 0.00 0.00 0.00 1.31
2968 3556 5.819901 GCCTTGCTTGTTCATCTCTTATAGT 59.180 40.000 0.00 0.00 0.00 2.12
2975 3563 7.525688 TTGTTCATCTCTTATAGTTTCTGCG 57.474 36.000 0.00 0.00 0.00 5.18
2976 3564 6.631016 TGTTCATCTCTTATAGTTTCTGCGT 58.369 36.000 0.00 0.00 0.00 5.24
2990 3578 1.393539 TCTGCGTTGCTATTTCTTCGC 59.606 47.619 0.00 0.00 43.14 4.70
2995 3583 3.758300 CGTTGCTATTTCTTCGCCAATT 58.242 40.909 0.00 0.00 0.00 2.32
2999 3618 6.494842 GTTGCTATTTCTTCGCCAATTATCA 58.505 36.000 0.00 0.00 0.00 2.15
3014 3633 5.394443 CCAATTATCATTGTTGTGAGGGTGG 60.394 44.000 0.00 0.00 38.58 4.61
3019 3640 0.472471 TTGTTGTGAGGGTGGGACTC 59.528 55.000 0.00 0.00 35.55 3.36
3023 3644 1.003233 GTGAGGGTGGGACTCAAGC 60.003 63.158 0.00 0.00 45.66 4.01
3026 3647 0.322008 GAGGGTGGGACTCAAGCAAG 60.322 60.000 0.00 0.00 35.09 4.01
3039 3660 0.882042 AAGCAAGAGTCCACTGTGCG 60.882 55.000 1.29 0.00 0.00 5.34
3044 3665 2.325583 AGAGTCCACTGTGCGAAAAA 57.674 45.000 1.29 0.00 0.00 1.94
3063 3688 2.827642 GCCACCTGATGCTCCTGC 60.828 66.667 0.00 0.00 40.20 4.85
3080 3705 1.717728 GCGCAAACTTGTCGTCGTG 60.718 57.895 0.30 0.00 32.85 4.35
3085 3710 0.179129 AAACTTGTCGTCGTGGTCGT 60.179 50.000 0.00 0.00 38.33 4.34
3100 3725 3.690139 GTGGTCGTCAACTCTCTCAGATA 59.310 47.826 0.00 0.00 0.00 1.98
3104 3729 4.393680 GTCGTCAACTCTCTCAGATACTGT 59.606 45.833 0.00 0.00 32.61 3.55
3127 5360 2.992847 AGGTTTTCTTCGGGGGAAAT 57.007 45.000 0.00 0.00 33.51 2.17
3128 5361 2.525368 AGGTTTTCTTCGGGGGAAATG 58.475 47.619 0.00 0.00 33.51 2.32
3131 5364 2.888414 GTTTTCTTCGGGGGAAATGTCA 59.112 45.455 0.00 0.00 33.51 3.58
3132 5365 2.961531 TTCTTCGGGGGAAATGTCAA 57.038 45.000 0.00 0.00 0.00 3.18
3134 5367 0.802494 CTTCGGGGGAAATGTCAACG 59.198 55.000 0.00 0.00 0.00 4.10
3137 5370 1.883021 GGGGGAAATGTCAACGCTG 59.117 57.895 0.00 0.00 0.00 5.18
3138 5371 1.595093 GGGGGAAATGTCAACGCTGG 61.595 60.000 0.00 0.00 0.00 4.85
3139 5372 0.608035 GGGGAAATGTCAACGCTGGA 60.608 55.000 0.00 0.00 0.00 3.86
3140 5373 1.243902 GGGAAATGTCAACGCTGGAA 58.756 50.000 0.00 0.00 0.00 3.53
3142 5375 2.231235 GGGAAATGTCAACGCTGGAAAT 59.769 45.455 0.00 0.00 0.00 2.17
3143 5376 3.306019 GGGAAATGTCAACGCTGGAAATT 60.306 43.478 0.00 0.00 0.00 1.82
3144 5377 4.306600 GGAAATGTCAACGCTGGAAATTT 58.693 39.130 0.00 0.00 0.00 1.82
3145 5378 4.385748 GGAAATGTCAACGCTGGAAATTTC 59.614 41.667 9.83 9.83 0.00 2.17
3147 5380 3.347958 TGTCAACGCTGGAAATTTCAC 57.652 42.857 19.49 9.62 0.00 3.18
3148 5381 2.948979 TGTCAACGCTGGAAATTTCACT 59.051 40.909 19.49 0.00 0.00 3.41
3151 5384 3.500680 TCAACGCTGGAAATTTCACTACC 59.499 43.478 19.49 3.32 0.00 3.18
3152 5385 3.134574 ACGCTGGAAATTTCACTACCA 57.865 42.857 19.49 7.83 0.00 3.25
3153 5386 3.482436 ACGCTGGAAATTTCACTACCAA 58.518 40.909 19.49 0.00 0.00 3.67
3154 5387 4.079253 ACGCTGGAAATTTCACTACCAAT 58.921 39.130 19.49 0.00 0.00 3.16
3155 5388 5.250200 ACGCTGGAAATTTCACTACCAATA 58.750 37.500 19.49 0.00 0.00 1.90
3156 5389 5.885912 ACGCTGGAAATTTCACTACCAATAT 59.114 36.000 19.49 0.00 0.00 1.28
3157 5390 6.038271 ACGCTGGAAATTTCACTACCAATATC 59.962 38.462 19.49 0.00 0.00 1.63
3158 5391 6.260936 CGCTGGAAATTTCACTACCAATATCT 59.739 38.462 19.49 0.00 0.00 1.98
3159 5392 7.201732 CGCTGGAAATTTCACTACCAATATCTT 60.202 37.037 19.49 0.00 0.00 2.40
3160 5393 8.470002 GCTGGAAATTTCACTACCAATATCTTT 58.530 33.333 19.49 0.00 0.00 2.52
3193 5426 4.717233 ACTGAAAATCAAGTGTGTGCAA 57.283 36.364 0.00 0.00 0.00 4.08
3194 5427 5.266733 ACTGAAAATCAAGTGTGTGCAAT 57.733 34.783 0.00 0.00 0.00 3.56
3195 5428 5.284079 ACTGAAAATCAAGTGTGTGCAATC 58.716 37.500 0.00 0.00 0.00 2.67
3196 5429 5.163530 ACTGAAAATCAAGTGTGTGCAATCA 60.164 36.000 0.00 0.00 0.00 2.57
3197 5430 5.845103 TGAAAATCAAGTGTGTGCAATCAT 58.155 33.333 0.00 0.00 0.00 2.45
3198 5431 6.979465 TGAAAATCAAGTGTGTGCAATCATA 58.021 32.000 0.00 0.00 0.00 2.15
3199 5432 6.862608 TGAAAATCAAGTGTGTGCAATCATAC 59.137 34.615 0.00 0.00 35.23 2.39
3201 5434 5.808042 ATCAAGTGTGTGCAATCATACTC 57.192 39.130 7.09 0.00 38.47 2.59
3202 5435 4.640364 TCAAGTGTGTGCAATCATACTCA 58.360 39.130 7.09 0.00 38.47 3.41
3203 5436 5.062528 TCAAGTGTGTGCAATCATACTCAA 58.937 37.500 7.09 0.00 38.47 3.02
3204 5437 5.706833 TCAAGTGTGTGCAATCATACTCAAT 59.293 36.000 7.09 0.00 38.47 2.57
3205 5438 6.207221 TCAAGTGTGTGCAATCATACTCAATT 59.793 34.615 7.09 0.00 38.47 2.32
3207 5440 7.076842 AGTGTGTGCAATCATACTCAATTAC 57.923 36.000 1.49 0.00 35.46 1.89
3208 5441 6.654582 AGTGTGTGCAATCATACTCAATTACA 59.345 34.615 1.49 0.00 35.46 2.41
3210 5443 7.430211 GTGTGTGCAATCATACTCAATTACATG 59.570 37.037 0.00 0.00 35.63 3.21
3211 5444 7.336427 TGTGTGCAATCATACTCAATTACATGA 59.664 33.333 0.00 0.00 35.63 3.07
3224 5457 6.615088 TCAATTACATGAGCTCTCTTTTTGC 58.385 36.000 16.19 0.00 0.00 3.68
3225 5458 5.573337 ATTACATGAGCTCTCTTTTTGCC 57.427 39.130 16.19 0.00 0.00 4.52
3226 5459 2.165998 ACATGAGCTCTCTTTTTGCCC 58.834 47.619 16.19 0.00 0.00 5.36
3227 5460 2.224967 ACATGAGCTCTCTTTTTGCCCT 60.225 45.455 16.19 0.00 0.00 5.19
3228 5461 2.191128 TGAGCTCTCTTTTTGCCCTC 57.809 50.000 16.19 0.00 0.00 4.30
3229 5462 1.421268 TGAGCTCTCTTTTTGCCCTCA 59.579 47.619 16.19 0.00 0.00 3.86
3230 5463 2.158623 TGAGCTCTCTTTTTGCCCTCAA 60.159 45.455 16.19 0.00 0.00 3.02
3231 5464 2.887152 GAGCTCTCTTTTTGCCCTCAAA 59.113 45.455 6.43 0.00 40.17 2.69
3232 5465 2.889678 AGCTCTCTTTTTGCCCTCAAAG 59.110 45.455 0.00 0.00 42.50 2.77
3234 5467 3.319122 GCTCTCTTTTTGCCCTCAAAGAA 59.681 43.478 0.00 0.00 42.50 2.52
3235 5468 4.202151 GCTCTCTTTTTGCCCTCAAAGAAA 60.202 41.667 0.00 0.00 42.50 2.52
3237 5470 6.484364 TCTCTTTTTGCCCTCAAAGAAAAT 57.516 33.333 0.00 0.00 42.50 1.82
3238 5471 6.515832 TCTCTTTTTGCCCTCAAAGAAAATC 58.484 36.000 0.00 0.00 42.50 2.17
3241 5474 6.762661 TCTTTTTGCCCTCAAAGAAAATCAAG 59.237 34.615 0.00 0.00 42.50 3.02
3242 5475 5.612725 TTTGCCCTCAAAGAAAATCAAGT 57.387 34.783 0.00 0.00 37.28 3.16
3244 5477 3.960102 TGCCCTCAAAGAAAATCAAGTGT 59.040 39.130 0.00 0.00 0.00 3.55
3246 5479 4.202151 GCCCTCAAAGAAAATCAAGTGTGT 60.202 41.667 0.00 0.00 0.00 3.72
3248 5481 6.294731 GCCCTCAAAGAAAATCAAGTGTGTAT 60.295 38.462 0.00 0.00 0.00 2.29
3249 5482 7.661040 CCCTCAAAGAAAATCAAGTGTGTATT 58.339 34.615 0.00 0.00 0.00 1.89
3251 5484 9.533253 CCTCAAAGAAAATCAAGTGTGTATTTT 57.467 29.630 0.00 0.00 35.95 1.82
3256 5489 8.647143 AGAAAATCAAGTGTGTATTTTTGTGG 57.353 30.769 0.00 0.00 33.99 4.17
3257 5490 8.474025 AGAAAATCAAGTGTGTATTTTTGTGGA 58.526 29.630 0.00 0.00 33.99 4.02
3258 5491 9.260002 GAAAATCAAGTGTGTATTTTTGTGGAT 57.740 29.630 0.00 0.00 33.99 3.41
3262 5495 8.628630 TCAAGTGTGTATTTTTGTGGATATGA 57.371 30.769 0.00 0.00 0.00 2.15
3263 5496 9.241919 TCAAGTGTGTATTTTTGTGGATATGAT 57.758 29.630 0.00 0.00 0.00 2.45
3264 5497 9.292846 CAAGTGTGTATTTTTGTGGATATGATG 57.707 33.333 0.00 0.00 0.00 3.07
3265 5498 8.806429 AGTGTGTATTTTTGTGGATATGATGA 57.194 30.769 0.00 0.00 0.00 2.92
3266 5499 9.241919 AGTGTGTATTTTTGTGGATATGATGAA 57.758 29.630 0.00 0.00 0.00 2.57
3267 5500 9.853555 GTGTGTATTTTTGTGGATATGATGAAA 57.146 29.630 0.00 0.00 0.00 2.69
3274 5507 9.993454 TTTTTGTGGATATGATGAAATTGTTGA 57.007 25.926 0.00 0.00 0.00 3.18
3276 5509 9.806203 TTTGTGGATATGATGAAATTGTTGATC 57.194 29.630 0.00 0.00 0.00 2.92
3278 5511 9.138596 TGTGGATATGATGAAATTGTTGATCAT 57.861 29.630 0.00 6.63 46.11 2.45
3279 5512 9.976511 GTGGATATGATGAAATTGTTGATCATT 57.023 29.630 6.69 0.00 43.13 2.57
3286 5519 9.984190 TGATGAAATTGTTGATCATTTCTTCAA 57.016 25.926 22.83 13.64 40.71 2.69
3288 5521 9.991906 ATGAAATTGTTGATCATTTCTTCAAGT 57.008 25.926 16.52 5.32 34.94 3.16
3289 5522 9.251792 TGAAATTGTTGATCATTTCTTCAAGTG 57.748 29.630 16.52 0.00 34.94 3.16
3290 5523 7.647907 AATTGTTGATCATTTCTTCAAGTGC 57.352 32.000 0.00 0.00 32.79 4.40
3291 5524 5.125100 TGTTGATCATTTCTTCAAGTGCC 57.875 39.130 0.00 0.00 32.79 5.01
3292 5525 4.161333 GTTGATCATTTCTTCAAGTGCCG 58.839 43.478 0.00 0.00 32.79 5.69
3293 5526 2.162208 TGATCATTTCTTCAAGTGCCGC 59.838 45.455 0.00 0.00 0.00 6.53
3295 5528 3.052455 TCATTTCTTCAAGTGCCGCTA 57.948 42.857 0.00 0.00 0.00 4.26
3296 5529 2.742053 TCATTTCTTCAAGTGCCGCTAC 59.258 45.455 0.00 0.00 0.00 3.58
3298 5531 1.508632 TTCTTCAAGTGCCGCTACAC 58.491 50.000 0.00 0.00 41.02 2.90
3305 5538 1.437986 GTGCCGCTACACTCTAGGG 59.562 63.158 0.00 0.00 37.58 3.53
3306 5539 2.417936 GCCGCTACACTCTAGGGC 59.582 66.667 0.00 0.00 0.00 5.19
3307 5540 2.128507 GCCGCTACACTCTAGGGCT 61.129 63.158 0.00 0.00 37.57 5.19
3308 5541 1.677637 GCCGCTACACTCTAGGGCTT 61.678 60.000 0.00 0.00 37.57 4.35
3309 5542 0.824759 CCGCTACACTCTAGGGCTTT 59.175 55.000 0.00 0.00 0.00 3.51
3310 5543 1.471676 CCGCTACACTCTAGGGCTTTG 60.472 57.143 0.00 0.00 0.00 2.77
3311 5544 1.471676 CGCTACACTCTAGGGCTTTGG 60.472 57.143 0.00 0.00 0.00 3.28
3322 5555 4.843624 GCTTTGGGCCTTGGTAGT 57.156 55.556 4.53 0.00 34.27 2.73
3323 5556 3.051617 GCTTTGGGCCTTGGTAGTT 57.948 52.632 4.53 0.00 34.27 2.24
3324 5557 0.603065 GCTTTGGGCCTTGGTAGTTG 59.397 55.000 4.53 0.00 34.27 3.16
3325 5558 1.821666 GCTTTGGGCCTTGGTAGTTGA 60.822 52.381 4.53 0.00 34.27 3.18
3326 5559 2.162681 CTTTGGGCCTTGGTAGTTGAG 58.837 52.381 4.53 0.00 0.00 3.02
3328 5561 1.440618 TGGGCCTTGGTAGTTGAGAA 58.559 50.000 4.53 0.00 0.00 2.87
3329 5562 1.777878 TGGGCCTTGGTAGTTGAGAAA 59.222 47.619 4.53 0.00 0.00 2.52
3332 5565 3.832490 GGGCCTTGGTAGTTGAGAAATTT 59.168 43.478 0.84 0.00 0.00 1.82
3333 5566 4.082190 GGGCCTTGGTAGTTGAGAAATTTC 60.082 45.833 10.33 10.33 0.00 2.17
3334 5567 4.522789 GGCCTTGGTAGTTGAGAAATTTCA 59.477 41.667 19.99 0.00 0.00 2.69
3336 5569 5.009610 GCCTTGGTAGTTGAGAAATTTCACA 59.990 40.000 19.99 16.66 0.00 3.58
3337 5570 6.294731 GCCTTGGTAGTTGAGAAATTTCACAT 60.295 38.462 19.99 8.63 0.00 3.21
3338 5571 7.308435 CCTTGGTAGTTGAGAAATTTCACATC 58.692 38.462 19.99 17.15 0.00 3.06
3340 5573 6.542821 TGGTAGTTGAGAAATTTCACATCCT 58.457 36.000 19.99 17.95 0.00 3.24
3341 5574 7.004086 TGGTAGTTGAGAAATTTCACATCCTT 58.996 34.615 19.99 7.16 0.00 3.36
3342 5575 7.040478 TGGTAGTTGAGAAATTTCACATCCTTG 60.040 37.037 19.99 0.00 0.00 3.61
3343 5576 6.336842 AGTTGAGAAATTTCACATCCTTGG 57.663 37.500 19.99 0.00 0.00 3.61
3344 5577 5.244626 AGTTGAGAAATTTCACATCCTTGGG 59.755 40.000 19.99 0.00 0.00 4.12
3345 5578 4.739793 TGAGAAATTTCACATCCTTGGGT 58.260 39.130 19.99 0.00 0.00 4.51
3346 5579 5.147032 TGAGAAATTTCACATCCTTGGGTT 58.853 37.500 19.99 0.00 0.00 4.11
3347 5580 5.010922 TGAGAAATTTCACATCCTTGGGTTG 59.989 40.000 19.99 0.00 0.00 3.77
3348 5581 4.284234 AGAAATTTCACATCCTTGGGTTGG 59.716 41.667 19.99 0.00 0.00 3.77
3349 5582 3.541242 ATTTCACATCCTTGGGTTGGA 57.459 42.857 0.00 0.00 38.06 3.53
3351 5584 1.144691 TCACATCCTTGGGTTGGACA 58.855 50.000 0.00 0.00 36.30 4.02
3353 5586 1.149101 ACATCCTTGGGTTGGACACT 58.851 50.000 0.00 0.00 36.30 3.55
3354 5587 1.499007 ACATCCTTGGGTTGGACACTT 59.501 47.619 0.00 0.00 36.30 3.16
3356 5589 1.518367 TCCTTGGGTTGGACACTTCT 58.482 50.000 0.00 0.00 0.00 2.85
3357 5590 1.850345 TCCTTGGGTTGGACACTTCTT 59.150 47.619 0.00 0.00 0.00 2.52
3359 5592 2.230660 CTTGGGTTGGACACTTCTTCC 58.769 52.381 0.00 0.00 0.00 3.46
3360 5593 1.518367 TGGGTTGGACACTTCTTCCT 58.482 50.000 0.00 0.00 33.84 3.36
3362 5595 1.545651 GGGTTGGACACTTCTTCCTGG 60.546 57.143 0.00 0.00 33.84 4.45
3363 5596 1.239347 GTTGGACACTTCTTCCTGGC 58.761 55.000 0.00 0.00 33.84 4.85
3365 5598 0.108585 TGGACACTTCTTCCTGGCAC 59.891 55.000 0.00 0.00 33.84 5.01
3366 5599 0.398318 GGACACTTCTTCCTGGCACT 59.602 55.000 0.00 0.00 0.00 4.40
3368 5601 1.876156 GACACTTCTTCCTGGCACTTG 59.124 52.381 0.00 0.00 0.00 3.16
3369 5602 1.490490 ACACTTCTTCCTGGCACTTGA 59.510 47.619 0.00 0.00 0.00 3.02
3372 5605 2.089980 CTTCTTCCTGGCACTTGATGG 58.910 52.381 0.00 0.00 0.00 3.51
3373 5606 1.361204 TCTTCCTGGCACTTGATGGA 58.639 50.000 0.00 0.00 0.00 3.41
3375 5608 1.004044 CTTCCTGGCACTTGATGGACT 59.996 52.381 0.00 0.00 0.00 3.85
3376 5609 0.615331 TCCTGGCACTTGATGGACTC 59.385 55.000 0.00 0.00 0.00 3.36
3377 5610 0.742281 CCTGGCACTTGATGGACTCG 60.742 60.000 0.00 0.00 0.00 4.18
3379 5612 2.109126 GGCACTTGATGGACTCGGC 61.109 63.158 0.00 0.00 0.00 5.54
3380 5613 1.375908 GCACTTGATGGACTCGGCA 60.376 57.895 0.00 0.00 0.00 5.69
3381 5614 1.639298 GCACTTGATGGACTCGGCAC 61.639 60.000 0.00 0.00 0.00 5.01
3383 5616 0.687354 ACTTGATGGACTCGGCACTT 59.313 50.000 0.00 0.00 0.00 3.16
3384 5617 1.081892 CTTGATGGACTCGGCACTTG 58.918 55.000 0.00 0.00 0.00 3.16
3385 5618 0.684535 TTGATGGACTCGGCACTTGA 59.315 50.000 0.00 0.00 0.00 3.02
3386 5619 0.904649 TGATGGACTCGGCACTTGAT 59.095 50.000 0.00 0.00 0.00 2.57
3387 5620 1.293924 GATGGACTCGGCACTTGATG 58.706 55.000 0.00 0.00 0.00 3.07
3389 5622 1.191489 TGGACTCGGCACTTGATGGA 61.191 55.000 0.00 0.00 0.00 3.41
3392 5625 0.247736 ACTCGGCACTTGATGGACTC 59.752 55.000 0.00 0.00 0.00 3.36
3393 5626 0.803768 CTCGGCACTTGATGGACTCG 60.804 60.000 0.00 0.00 0.00 4.18
3394 5627 1.811266 CGGCACTTGATGGACTCGG 60.811 63.158 0.00 0.00 0.00 4.63
3395 5628 1.296715 GGCACTTGATGGACTCGGT 59.703 57.895 0.00 0.00 0.00 4.69
3396 5629 0.321653 GGCACTTGATGGACTCGGTT 60.322 55.000 0.00 0.00 0.00 4.44
3397 5630 0.798776 GCACTTGATGGACTCGGTTG 59.201 55.000 0.00 0.00 0.00 3.77
3398 5631 1.608025 GCACTTGATGGACTCGGTTGA 60.608 52.381 0.00 0.00 0.00 3.18
3399 5632 2.766313 CACTTGATGGACTCGGTTGAA 58.234 47.619 0.00 0.00 0.00 2.69
3401 5634 1.734465 CTTGATGGACTCGGTTGAAGC 59.266 52.381 0.00 0.00 0.00 3.86
3402 5635 0.976641 TGATGGACTCGGTTGAAGCT 59.023 50.000 0.00 0.00 0.00 3.74
3404 5637 1.734465 GATGGACTCGGTTGAAGCTTG 59.266 52.381 2.10 0.00 0.00 4.01
3407 5640 0.884704 GACTCGGTTGAAGCTTGGCA 60.885 55.000 2.10 0.00 0.00 4.92
3408 5641 0.886490 ACTCGGTTGAAGCTTGGCAG 60.886 55.000 2.10 0.00 0.00 4.85
3409 5642 1.580845 CTCGGTTGAAGCTTGGCAGG 61.581 60.000 2.10 0.00 0.00 4.85
3410 5643 2.653115 GGTTGAAGCTTGGCAGGC 59.347 61.111 14.47 14.47 0.00 4.85
3411 5644 2.202395 GGTTGAAGCTTGGCAGGCA 61.202 57.895 24.11 0.00 0.00 4.75
3412 5645 1.741525 GTTGAAGCTTGGCAGGCAA 59.258 52.632 24.11 9.42 0.00 4.52
3418 5651 3.373226 CTTGGCAGGCAAGCACAT 58.627 55.556 22.73 0.00 35.83 3.21
3419 5652 1.080093 CTTGGCAGGCAAGCACATG 60.080 57.895 22.73 0.35 35.83 3.21
3420 5653 1.812686 CTTGGCAGGCAAGCACATGT 61.813 55.000 22.73 0.00 35.83 3.21
3421 5654 2.089887 TTGGCAGGCAAGCACATGTG 62.090 55.000 21.83 21.83 35.83 3.21
3436 5669 3.587933 GTGCCGCGGGACACAAAA 61.588 61.111 40.27 0.00 36.77 2.44
3437 5670 2.596046 TGCCGCGGGACACAAAAT 60.596 55.556 29.38 0.00 0.00 1.82
3438 5671 2.196925 TGCCGCGGGACACAAAATT 61.197 52.632 29.38 0.00 0.00 1.82
3439 5672 1.732683 GCCGCGGGACACAAAATTG 60.733 57.895 29.38 0.00 0.00 2.32
3440 5673 1.953017 CCGCGGGACACAAAATTGA 59.047 52.632 20.10 0.00 0.00 2.57
3441 5674 0.386731 CCGCGGGACACAAAATTGAC 60.387 55.000 20.10 0.00 0.00 3.18
3442 5675 0.309302 CGCGGGACACAAAATTGACA 59.691 50.000 0.00 0.00 0.00 3.58
3443 5676 1.268794 CGCGGGACACAAAATTGACAA 60.269 47.619 0.00 0.00 0.00 3.18
3446 5679 2.223688 CGGGACACAAAATTGACAAGCA 60.224 45.455 0.00 0.00 0.00 3.91
3447 5680 3.736433 CGGGACACAAAATTGACAAGCAA 60.736 43.478 0.00 0.00 41.53 3.91
3448 5681 3.803778 GGGACACAAAATTGACAAGCAAG 59.196 43.478 0.00 0.00 40.42 4.01
3449 5682 3.803778 GGACACAAAATTGACAAGCAAGG 59.196 43.478 0.00 0.00 40.42 3.61
3451 5684 2.545106 CACAAAATTGACAAGCAAGGCC 59.455 45.455 0.00 0.00 40.42 5.19
3452 5685 2.435437 ACAAAATTGACAAGCAAGGCCT 59.565 40.909 0.00 0.00 40.42 5.19
3454 5687 1.260544 AATTGACAAGCAAGGCCTCC 58.739 50.000 5.23 0.00 40.42 4.30
3455 5688 0.613012 ATTGACAAGCAAGGCCTCCC 60.613 55.000 5.23 0.00 40.42 4.30
3456 5689 2.005606 TTGACAAGCAAGGCCTCCCA 62.006 55.000 5.23 0.00 31.55 4.37
3457 5690 1.973812 GACAAGCAAGGCCTCCCAC 60.974 63.158 5.23 0.00 0.00 4.61
3458 5691 2.115910 CAAGCAAGGCCTCCCACA 59.884 61.111 5.23 0.00 0.00 4.17
3459 5692 2.116125 AAGCAAGGCCTCCCACAC 59.884 61.111 5.23 0.00 0.00 3.82
3460 5693 3.513750 AAGCAAGGCCTCCCACACC 62.514 63.158 5.23 0.00 0.00 4.16
3461 5694 4.284550 GCAAGGCCTCCCACACCA 62.285 66.667 5.23 0.00 0.00 4.17
3462 5695 2.765969 CAAGGCCTCCCACACCAT 59.234 61.111 5.23 0.00 0.00 3.55
3463 5696 1.679977 CAAGGCCTCCCACACCATG 60.680 63.158 5.23 0.00 0.00 3.66
3464 5697 3.590466 AAGGCCTCCCACACCATGC 62.590 63.158 5.23 0.00 0.00 4.06
3465 5698 4.052518 GGCCTCCCACACCATGCT 62.053 66.667 0.00 0.00 0.00 3.79
3466 5699 2.036256 GCCTCCCACACCATGCTT 59.964 61.111 0.00 0.00 0.00 3.91
3467 5700 2.345760 GCCTCCCACACCATGCTTG 61.346 63.158 0.00 0.00 0.00 4.01
3468 5701 1.075482 CCTCCCACACCATGCTTGT 59.925 57.895 0.00 0.00 0.00 3.16
3469 5702 1.246056 CCTCCCACACCATGCTTGTG 61.246 60.000 15.45 15.45 43.44 3.33
3471 5704 0.537143 TCCCACACCATGCTTGTGTC 60.537 55.000 19.00 0.00 44.77 3.67
3472 5705 1.575922 CCACACCATGCTTGTGTCG 59.424 57.895 19.00 4.91 44.77 4.35
3473 5706 1.165907 CCACACCATGCTTGTGTCGT 61.166 55.000 19.00 0.00 44.77 4.34
3474 5707 0.041047 CACACCATGCTTGTGTCGTG 60.041 55.000 14.56 5.49 44.77 4.35
3475 5708 1.165907 ACACCATGCTTGTGTCGTGG 61.166 55.000 10.12 0.00 43.15 4.94
3476 5709 0.884259 CACCATGCTTGTGTCGTGGA 60.884 55.000 8.10 0.00 41.91 4.02
3477 5710 0.036732 ACCATGCTTGTGTCGTGGAT 59.963 50.000 8.10 0.00 41.91 3.41
3478 5711 1.277842 ACCATGCTTGTGTCGTGGATA 59.722 47.619 8.10 0.00 41.91 2.59
3479 5712 2.290008 ACCATGCTTGTGTCGTGGATAA 60.290 45.455 8.10 0.00 41.91 1.75
3480 5713 2.945008 CCATGCTTGTGTCGTGGATAAT 59.055 45.455 0.00 0.00 41.91 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.418047 AGATAAACGTGGGGGAGTTTTG 58.582 45.455 0.00 0.00 40.54 2.44
2 3 2.910977 AGAGATAAACGTGGGGGAGTTT 59.089 45.455 0.00 0.00 42.43 2.66
5 6 1.139058 CCAGAGATAAACGTGGGGGAG 59.861 57.143 0.00 0.00 0.00 4.30
6 7 1.200519 CCAGAGATAAACGTGGGGGA 58.799 55.000 0.00 0.00 0.00 4.81
7 8 0.909623 ACCAGAGATAAACGTGGGGG 59.090 55.000 0.00 0.00 33.59 5.40
8 9 2.747446 CAAACCAGAGATAAACGTGGGG 59.253 50.000 0.00 0.00 33.59 4.96
9 10 2.161609 GCAAACCAGAGATAAACGTGGG 59.838 50.000 0.00 0.00 33.59 4.61
10 11 2.159707 CGCAAACCAGAGATAAACGTGG 60.160 50.000 0.00 0.00 34.86 4.94
11 12 2.724839 GCGCAAACCAGAGATAAACGTG 60.725 50.000 0.30 0.00 0.00 4.49
12 13 1.463444 GCGCAAACCAGAGATAAACGT 59.537 47.619 0.30 0.00 0.00 3.99
13 14 1.526986 CGCGCAAACCAGAGATAAACG 60.527 52.381 8.75 0.00 0.00 3.60
14 15 1.730064 TCGCGCAAACCAGAGATAAAC 59.270 47.619 8.75 0.00 0.00 2.01
15 16 1.999735 CTCGCGCAAACCAGAGATAAA 59.000 47.619 8.75 0.00 32.84 1.40
16 17 1.203758 TCTCGCGCAAACCAGAGATAA 59.796 47.619 8.75 0.00 35.13 1.75
17 18 0.815095 TCTCGCGCAAACCAGAGATA 59.185 50.000 8.75 0.00 35.13 1.98
18 19 0.037326 TTCTCGCGCAAACCAGAGAT 60.037 50.000 8.75 0.00 39.20 2.75
19 20 0.249699 TTTCTCGCGCAAACCAGAGA 60.250 50.000 8.75 7.32 37.90 3.10
20 21 0.586319 TTTTCTCGCGCAAACCAGAG 59.414 50.000 8.75 4.63 0.00 3.35
21 22 0.306533 GTTTTCTCGCGCAAACCAGA 59.693 50.000 8.75 0.00 0.00 3.86
22 23 0.028770 TGTTTTCTCGCGCAAACCAG 59.971 50.000 19.26 5.18 32.76 4.00
23 24 0.665835 ATGTTTTCTCGCGCAAACCA 59.334 45.000 19.26 12.33 32.76 3.67
24 25 1.052287 CATGTTTTCTCGCGCAAACC 58.948 50.000 19.26 7.98 32.76 3.27
25 26 1.708680 GACATGTTTTCTCGCGCAAAC 59.291 47.619 8.75 11.19 34.09 2.93
26 27 1.334599 GGACATGTTTTCTCGCGCAAA 60.335 47.619 8.75 0.00 0.00 3.68
27 28 0.237235 GGACATGTTTTCTCGCGCAA 59.763 50.000 8.75 0.00 0.00 4.85
28 29 1.866237 GGACATGTTTTCTCGCGCA 59.134 52.632 8.75 0.00 0.00 6.09
29 30 1.225745 CGGACATGTTTTCTCGCGC 60.226 57.895 0.00 0.00 0.00 6.86
30 31 0.787787 TTCGGACATGTTTTCTCGCG 59.212 50.000 0.00 0.00 0.00 5.87
31 32 2.571206 GTTTCGGACATGTTTTCTCGC 58.429 47.619 0.00 0.00 0.00 5.03
32 33 2.822827 CGTTTCGGACATGTTTTCTCG 58.177 47.619 0.00 0.14 0.00 4.04
33 34 2.571206 GCGTTTCGGACATGTTTTCTC 58.429 47.619 0.00 0.00 0.00 2.87
34 35 1.070175 CGCGTTTCGGACATGTTTTCT 60.070 47.619 0.00 0.00 33.78 2.52
35 36 1.314581 CGCGTTTCGGACATGTTTTC 58.685 50.000 0.00 0.00 33.78 2.29
36 37 0.658897 ACGCGTTTCGGACATGTTTT 59.341 45.000 5.58 0.00 43.86 2.43
37 38 0.233848 GACGCGTTTCGGACATGTTT 59.766 50.000 15.53 0.00 43.86 2.83
38 39 1.857364 GACGCGTTTCGGACATGTT 59.143 52.632 15.53 0.00 43.86 2.71
39 40 2.369629 CGACGCGTTTCGGACATGT 61.370 57.895 15.53 0.00 43.86 3.21
40 41 2.390288 CGACGCGTTTCGGACATG 59.610 61.111 15.53 0.00 43.86 3.21
41 42 3.475774 GCGACGCGTTTCGGACAT 61.476 61.111 15.53 0.00 43.86 3.06
52 53 4.541482 TGTATCGGTCCGCGACGC 62.541 66.667 8.23 10.49 32.65 5.19
53 54 2.649975 GTGTATCGGTCCGCGACG 60.650 66.667 8.23 9.84 32.65 5.12
54 55 1.153978 TTGTGTATCGGTCCGCGAC 60.154 57.895 8.23 7.41 0.00 5.19
55 56 1.153978 GTTGTGTATCGGTCCGCGA 60.154 57.895 8.23 0.00 0.00 5.87
56 57 2.162754 GGTTGTGTATCGGTCCGCG 61.163 63.158 6.34 0.00 0.00 6.46
57 58 2.162754 CGGTTGTGTATCGGTCCGC 61.163 63.158 6.34 0.00 0.00 5.54
58 59 2.162754 GCGGTTGTGTATCGGTCCG 61.163 63.158 4.39 4.39 40.72 4.79
59 60 2.162754 CGCGGTTGTGTATCGGTCC 61.163 63.158 0.00 0.00 0.00 4.46
60 61 1.010419 AACGCGGTTGTGTATCGGTC 61.010 55.000 12.47 0.00 38.01 4.79
61 62 1.005867 AACGCGGTTGTGTATCGGT 60.006 52.632 12.47 0.00 38.01 4.69
62 63 1.418367 CAACGCGGTTGTGTATCGG 59.582 57.895 12.47 0.00 38.56 4.18
63 64 1.009903 TCCAACGCGGTTGTGTATCG 61.010 55.000 12.47 0.00 41.41 2.92
64 65 1.062002 CATCCAACGCGGTTGTGTATC 59.938 52.381 12.47 0.00 41.41 2.24
65 66 1.083489 CATCCAACGCGGTTGTGTAT 58.917 50.000 12.47 3.69 41.41 2.29
66 67 0.033642 TCATCCAACGCGGTTGTGTA 59.966 50.000 12.47 1.51 41.41 2.90
67 68 1.227704 TCATCCAACGCGGTTGTGT 60.228 52.632 12.47 0.99 41.41 3.72
68 69 1.206578 GTCATCCAACGCGGTTGTG 59.793 57.895 12.47 1.94 41.41 3.33
69 70 0.534203 AAGTCATCCAACGCGGTTGT 60.534 50.000 12.47 0.00 41.41 3.32
70 71 0.165944 GAAGTCATCCAACGCGGTTG 59.834 55.000 12.47 12.51 42.49 3.77
71 72 2.540145 GAAGTCATCCAACGCGGTT 58.460 52.632 12.47 0.00 35.57 4.44
72 73 4.278956 GAAGTCATCCAACGCGGT 57.721 55.556 12.47 0.00 35.57 5.68
80 81 2.908796 GGACCCCGGAAGTCATCC 59.091 66.667 21.55 8.02 45.57 3.51
81 82 2.499685 CGGACCCCGGAAGTCATC 59.500 66.667 21.55 8.29 44.15 2.92
93 94 3.572196 TTACGCAACCGTCCGGACC 62.572 63.158 28.52 13.11 46.39 4.46
94 95 2.049248 TTACGCAACCGTCCGGAC 60.049 61.111 25.28 25.28 46.39 4.79
95 96 2.259204 CTTACGCAACCGTCCGGA 59.741 61.111 13.54 0.00 46.39 5.14
96 97 2.812178 CCTTACGCAACCGTCCGG 60.812 66.667 3.76 3.76 46.39 5.14
97 98 1.223417 AAACCTTACGCAACCGTCCG 61.223 55.000 0.00 0.00 46.39 4.79
98 99 1.794512 TAAACCTTACGCAACCGTCC 58.205 50.000 0.00 0.00 46.39 4.79
99 100 2.158254 CCTTAAACCTTACGCAACCGTC 59.842 50.000 0.00 0.00 46.39 4.79
101 102 1.465777 CCCTTAAACCTTACGCAACCG 59.534 52.381 0.00 0.00 41.14 4.44
102 103 2.227149 CACCCTTAAACCTTACGCAACC 59.773 50.000 0.00 0.00 0.00 3.77
103 104 2.227149 CCACCCTTAAACCTTACGCAAC 59.773 50.000 0.00 0.00 0.00 4.17
104 105 2.506444 CCACCCTTAAACCTTACGCAA 58.494 47.619 0.00 0.00 0.00 4.85
105 106 1.271488 CCCACCCTTAAACCTTACGCA 60.271 52.381 0.00 0.00 0.00 5.24
106 107 1.456296 CCCACCCTTAAACCTTACGC 58.544 55.000 0.00 0.00 0.00 4.42
107 108 1.456296 GCCCACCCTTAAACCTTACG 58.544 55.000 0.00 0.00 0.00 3.18
108 109 1.271543 ACGCCCACCCTTAAACCTTAC 60.272 52.381 0.00 0.00 0.00 2.34
109 110 1.066471 ACGCCCACCCTTAAACCTTA 58.934 50.000 0.00 0.00 0.00 2.69
110 111 0.186630 AACGCCCACCCTTAAACCTT 59.813 50.000 0.00 0.00 0.00 3.50
111 112 0.538746 CAACGCCCACCCTTAAACCT 60.539 55.000 0.00 0.00 0.00 3.50
112 113 1.529152 CCAACGCCCACCCTTAAACC 61.529 60.000 0.00 0.00 0.00 3.27
113 114 1.961378 CCAACGCCCACCCTTAAAC 59.039 57.895 0.00 0.00 0.00 2.01
114 115 1.904378 GCCAACGCCCACCCTTAAA 60.904 57.895 0.00 0.00 0.00 1.52
115 116 2.282603 GCCAACGCCCACCCTTAA 60.283 61.111 0.00 0.00 0.00 1.85
116 117 3.561120 CTGCCAACGCCCACCCTTA 62.561 63.158 0.00 0.00 0.00 2.69
117 118 4.974721 CTGCCAACGCCCACCCTT 62.975 66.667 0.00 0.00 0.00 3.95
119 120 3.853698 TTACTGCCAACGCCCACCC 62.854 63.158 0.00 0.00 0.00 4.61
120 121 2.281900 TTACTGCCAACGCCCACC 60.282 61.111 0.00 0.00 0.00 4.61
121 122 2.332654 CCTTACTGCCAACGCCCAC 61.333 63.158 0.00 0.00 0.00 4.61
122 123 1.847798 ATCCTTACTGCCAACGCCCA 61.848 55.000 0.00 0.00 0.00 5.36
123 124 1.077716 ATCCTTACTGCCAACGCCC 60.078 57.895 0.00 0.00 0.00 6.13
124 125 1.376609 CCATCCTTACTGCCAACGCC 61.377 60.000 0.00 0.00 0.00 5.68
125 126 1.376609 CCCATCCTTACTGCCAACGC 61.377 60.000 0.00 0.00 0.00 4.84
126 127 0.035439 ACCCATCCTTACTGCCAACG 60.035 55.000 0.00 0.00 0.00 4.10
127 128 1.463674 CACCCATCCTTACTGCCAAC 58.536 55.000 0.00 0.00 0.00 3.77
128 129 0.323360 GCACCCATCCTTACTGCCAA 60.323 55.000 0.00 0.00 0.00 4.52
129 130 1.302949 GCACCCATCCTTACTGCCA 59.697 57.895 0.00 0.00 0.00 4.92
130 131 1.032114 GTGCACCCATCCTTACTGCC 61.032 60.000 5.22 0.00 0.00 4.85
131 132 0.035056 AGTGCACCCATCCTTACTGC 60.035 55.000 14.63 0.00 0.00 4.40
132 133 2.766263 TCTAGTGCACCCATCCTTACTG 59.234 50.000 14.63 0.00 0.00 2.74
133 134 3.116096 TCTAGTGCACCCATCCTTACT 57.884 47.619 14.63 0.00 0.00 2.24
134 135 4.423625 AATCTAGTGCACCCATCCTTAC 57.576 45.455 14.63 0.00 0.00 2.34
188 190 2.654749 TCCACTGTCTCATGTTAGCG 57.345 50.000 0.00 0.00 0.00 4.26
192 194 2.909006 ACTCCATCCACTGTCTCATGTT 59.091 45.455 0.00 0.00 0.00 2.71
194 196 3.448660 TGTACTCCATCCACTGTCTCATG 59.551 47.826 0.00 0.00 0.00 3.07
197 199 4.537135 TTTGTACTCCATCCACTGTCTC 57.463 45.455 0.00 0.00 0.00 3.36
272 274 4.684242 CCATTAGCTGTATGCATGCAAATG 59.316 41.667 26.68 24.41 45.94 2.32
295 297 5.116069 TGTTTTCCTCGGCATTAACTTTC 57.884 39.130 0.00 0.00 0.00 2.62
318 320 9.703892 TCGATTTACTATCTACTACTACTCCAC 57.296 37.037 0.00 0.00 0.00 4.02
330 332 7.893124 AGGTTCTGGTTCGATTTACTATCTA 57.107 36.000 0.00 0.00 0.00 1.98
331 333 6.793505 AGGTTCTGGTTCGATTTACTATCT 57.206 37.500 0.00 0.00 0.00 1.98
332 334 6.479331 GGAAGGTTCTGGTTCGATTTACTATC 59.521 42.308 0.00 0.00 0.00 2.08
333 335 6.070424 TGGAAGGTTCTGGTTCGATTTACTAT 60.070 38.462 0.00 0.00 0.00 2.12
334 336 5.246656 TGGAAGGTTCTGGTTCGATTTACTA 59.753 40.000 0.00 0.00 0.00 1.82
335 337 4.041198 TGGAAGGTTCTGGTTCGATTTACT 59.959 41.667 0.00 0.00 0.00 2.24
393 410 1.985473 TTTCAGCTGACACTTGGCAT 58.015 45.000 18.03 0.00 29.25 4.40
422 439 3.733883 TGGTCCTACAGCAGTACTACT 57.266 47.619 0.00 0.00 0.00 2.57
423 440 4.796038 TTTGGTCCTACAGCAGTACTAC 57.204 45.455 0.00 0.00 32.85 2.73
424 441 7.484993 TTATTTTGGTCCTACAGCAGTACTA 57.515 36.000 0.00 0.00 32.85 1.82
435 452 6.069673 TCTGCTCTTGGATTATTTTGGTCCTA 60.070 38.462 0.00 0.00 33.15 2.94
484 502 7.151694 AGTACTTAGAGGCTAAGTATCCTGA 57.848 40.000 22.60 5.96 40.70 3.86
505 523 4.408276 AGCAGTGTCTTCTTCTGGTAGTA 58.592 43.478 0.00 0.00 37.99 1.82
540 573 2.612285 TGTATTTTGCACCCCATCCA 57.388 45.000 0.00 0.00 0.00 3.41
571 604 4.359434 TTGCTGTATTGGTGGAGTACAA 57.641 40.909 0.00 0.00 0.00 2.41
589 627 6.261118 GCCAGCAGCATACTATATAAATTGC 58.739 40.000 0.00 3.43 42.97 3.56
659 697 0.179076 AGCCAGTGCCAAAGTTTTGC 60.179 50.000 4.75 4.75 38.69 3.68
678 716 2.358615 CAGCAGTAGCCGGTTGCA 60.359 61.111 19.36 0.00 44.83 4.08
713 755 5.391523 CGGAAGATTTTGGTTCGATTAGCAA 60.392 40.000 0.00 0.00 34.02 3.91
877 934 1.131638 AGAGCAAACCTCAGTCACCA 58.868 50.000 0.00 0.00 43.31 4.17
879 936 0.871057 GCAGAGCAAACCTCAGTCAC 59.129 55.000 0.00 0.00 43.31 3.67
881 938 1.437625 GAGCAGAGCAAACCTCAGTC 58.562 55.000 0.00 0.00 43.31 3.51
882 939 0.036022 GGAGCAGAGCAAACCTCAGT 59.964 55.000 0.00 0.00 43.31 3.41
883 940 0.676151 GGGAGCAGAGCAAACCTCAG 60.676 60.000 0.00 0.00 43.31 3.35
884 941 1.376466 GGGAGCAGAGCAAACCTCA 59.624 57.895 0.00 0.00 43.31 3.86
885 942 1.377856 GGGGAGCAGAGCAAACCTC 60.378 63.158 0.00 0.00 41.07 3.85
886 943 2.759795 GGGGAGCAGAGCAAACCT 59.240 61.111 0.00 0.00 0.00 3.50
947 1006 1.701847 AGAGAATGGTTGGAGCTGTGT 59.298 47.619 0.00 0.00 0.00 3.72
957 1016 4.462834 TGTGTGATCGACTAGAGAATGGTT 59.537 41.667 0.00 0.00 0.00 3.67
961 1020 3.487711 GCGTGTGTGATCGACTAGAGAAT 60.488 47.826 0.00 0.00 0.00 2.40
967 1026 1.397343 GAGAGCGTGTGTGATCGACTA 59.603 52.381 0.00 0.00 0.00 2.59
1292 1357 2.497273 TCTGATTCTGATGGAGCGAACA 59.503 45.455 0.00 0.00 0.00 3.18
1302 1372 3.218453 AGACGGACGATCTGATTCTGAT 58.782 45.455 5.81 5.81 0.00 2.90
1325 1398 4.869861 TCAAGATCAATCGAATCGAAGCAA 59.130 37.500 10.12 0.00 39.99 3.91
1327 1400 4.505922 ACTCAAGATCAATCGAATCGAAGC 59.494 41.667 10.12 0.00 39.99 3.86
1333 1406 6.875726 TGTCAAGAACTCAAGATCAATCGAAT 59.124 34.615 0.00 0.00 0.00 3.34
1362 1435 2.120909 CATCCCCAATCCACCACGC 61.121 63.158 0.00 0.00 0.00 5.34
1366 1439 0.041090 AACACCATCCCCAATCCACC 59.959 55.000 0.00 0.00 0.00 4.61
1367 1440 1.185315 CAACACCATCCCCAATCCAC 58.815 55.000 0.00 0.00 0.00 4.02
1368 1441 0.614415 GCAACACCATCCCCAATCCA 60.614 55.000 0.00 0.00 0.00 3.41
1369 1442 0.614415 TGCAACACCATCCCCAATCC 60.614 55.000 0.00 0.00 0.00 3.01
1371 1444 0.615544 CCTGCAACACCATCCCCAAT 60.616 55.000 0.00 0.00 0.00 3.16
1372 1445 1.228831 CCTGCAACACCATCCCCAA 60.229 57.895 0.00 0.00 0.00 4.12
1373 1446 2.440147 CCTGCAACACCATCCCCA 59.560 61.111 0.00 0.00 0.00 4.96
1374 1447 1.978617 CACCTGCAACACCATCCCC 60.979 63.158 0.00 0.00 0.00 4.81
1375 1448 0.539438 TTCACCTGCAACACCATCCC 60.539 55.000 0.00 0.00 0.00 3.85
1378 1451 0.178981 AGCTTCACCTGCAACACCAT 60.179 50.000 0.00 0.00 0.00 3.55
1379 1452 1.102809 CAGCTTCACCTGCAACACCA 61.103 55.000 0.00 0.00 0.00 4.17
1381 1454 1.103398 ACCAGCTTCACCTGCAACAC 61.103 55.000 0.00 0.00 0.00 3.32
1382 1455 1.102809 CACCAGCTTCACCTGCAACA 61.103 55.000 0.00 0.00 0.00 3.33
1811 2025 3.827302 GGACTCTGTTCTGGTCAAGTAGA 59.173 47.826 0.00 0.00 0.00 2.59
1823 2039 6.542735 ACAGGTAAAAAGAAAGGACTCTGTTC 59.457 38.462 0.00 0.00 0.00 3.18
1867 2087 6.743575 AAGATCCGGTAATTTCAGTTTCAG 57.256 37.500 0.00 0.00 0.00 3.02
1964 2318 1.338769 GCCGGTGACCTTGTTCACTAT 60.339 52.381 1.90 0.00 44.63 2.12
1966 2320 1.227853 GCCGGTGACCTTGTTCACT 60.228 57.895 1.90 0.00 44.63 3.41
2363 2922 4.943508 GCAAAGATCATGCGAAATTAGC 57.056 40.909 7.62 0.00 33.57 3.09
2372 2931 3.116300 CAGATGCAAGCAAAGATCATGC 58.884 45.455 13.85 13.85 44.15 4.06
2373 2932 4.105486 CACAGATGCAAGCAAAGATCATG 58.895 43.478 0.00 0.00 0.00 3.07
2376 2935 3.844577 ACACAGATGCAAGCAAAGATC 57.155 42.857 0.00 0.00 0.00 2.75
2377 2936 3.825014 AGAACACAGATGCAAGCAAAGAT 59.175 39.130 0.00 0.00 0.00 2.40
2378 2937 3.004002 CAGAACACAGATGCAAGCAAAGA 59.996 43.478 0.00 0.00 0.00 2.52
2379 2938 3.004002 TCAGAACACAGATGCAAGCAAAG 59.996 43.478 0.00 0.00 0.00 2.77
2497 3069 2.021106 CGACTACGACGACTCGGC 59.979 66.667 0.00 0.00 44.80 5.54
2561 3137 2.477863 GGACACAGCAACATTATTCGCC 60.478 50.000 0.00 0.00 0.00 5.54
2628 3211 1.084290 CACAAAGCGACACACGACG 60.084 57.895 0.00 0.00 45.77 5.12
2633 3216 3.563390 TCAATCAATCACAAAGCGACACA 59.437 39.130 0.00 0.00 0.00 3.72
2634 3217 4.145876 TCAATCAATCACAAAGCGACAC 57.854 40.909 0.00 0.00 0.00 3.67
2636 3219 3.166657 GCTCAATCAATCACAAAGCGAC 58.833 45.455 0.00 0.00 0.00 5.19
2637 3220 2.162208 GGCTCAATCAATCACAAAGCGA 59.838 45.455 0.00 0.00 0.00 4.93
2638 3221 2.523015 GGCTCAATCAATCACAAAGCG 58.477 47.619 0.00 0.00 0.00 4.68
2640 3223 2.733227 GCCGGCTCAATCAATCACAAAG 60.733 50.000 22.15 0.00 0.00 2.77
2642 3225 0.810648 GCCGGCTCAATCAATCACAA 59.189 50.000 22.15 0.00 0.00 3.33
2643 3226 1.368345 CGCCGGCTCAATCAATCACA 61.368 55.000 26.68 0.00 0.00 3.58
2644 3227 1.353103 CGCCGGCTCAATCAATCAC 59.647 57.895 26.68 0.00 0.00 3.06
2648 3231 0.605319 AGAAACGCCGGCTCAATCAA 60.605 50.000 26.68 0.00 0.00 2.57
2703 3286 2.507471 AGACTTCAGAATCATGGTCCCC 59.493 50.000 0.00 0.00 0.00 4.81
2809 3397 4.166725 AGGTGAGCCCATTGATTAGATCAA 59.833 41.667 5.88 5.88 43.78 2.57
2810 3398 3.718434 AGGTGAGCCCATTGATTAGATCA 59.282 43.478 0.00 0.00 34.47 2.92
2843 3431 4.043750 CACACCAAACGTAGTACGAGAAA 58.956 43.478 28.47 0.00 45.00 2.52
2845 3433 2.605338 GCACACCAAACGTAGTACGAGA 60.605 50.000 28.47 0.00 45.00 4.04
2902 3490 1.473258 TTGATCTGGGAAATTGGGCG 58.527 50.000 0.00 0.00 0.00 6.13
2913 3501 4.678840 GCCAATTAAGCCTGTTTGATCTGG 60.679 45.833 0.00 0.00 0.00 3.86
2938 3526 4.218686 AACAAGCAAGGCCCCGGT 62.219 61.111 0.00 0.00 0.00 5.28
2939 3527 3.373565 GAACAAGCAAGGCCCCGG 61.374 66.667 0.00 0.00 0.00 5.73
2945 3533 7.856145 AACTATAAGAGATGAACAAGCAAGG 57.144 36.000 0.00 0.00 0.00 3.61
2946 3534 9.160496 AGAAACTATAAGAGATGAACAAGCAAG 57.840 33.333 0.00 0.00 0.00 4.01
2948 3536 7.065085 GCAGAAACTATAAGAGATGAACAAGCA 59.935 37.037 0.00 0.00 0.00 3.91
2949 3537 7.405769 GCAGAAACTATAAGAGATGAACAAGC 58.594 38.462 0.00 0.00 0.00 4.01
2950 3538 7.276658 ACGCAGAAACTATAAGAGATGAACAAG 59.723 37.037 0.00 0.00 0.00 3.16
2952 3540 6.631016 ACGCAGAAACTATAAGAGATGAACA 58.369 36.000 0.00 0.00 0.00 3.18
2953 3541 7.394872 CAACGCAGAAACTATAAGAGATGAAC 58.605 38.462 0.00 0.00 0.00 3.18
2955 3543 5.520288 GCAACGCAGAAACTATAAGAGATGA 59.480 40.000 0.00 0.00 0.00 2.92
2956 3544 5.521735 AGCAACGCAGAAACTATAAGAGATG 59.478 40.000 0.00 0.00 0.00 2.90
2957 3545 5.665459 AGCAACGCAGAAACTATAAGAGAT 58.335 37.500 0.00 0.00 0.00 2.75
2958 3546 5.073311 AGCAACGCAGAAACTATAAGAGA 57.927 39.130 0.00 0.00 0.00 3.10
2959 3547 7.470289 AATAGCAACGCAGAAACTATAAGAG 57.530 36.000 0.00 0.00 0.00 2.85
2963 3551 7.253983 CGAAGAAATAGCAACGCAGAAACTATA 60.254 37.037 0.00 0.00 0.00 1.31
2967 3555 3.840763 CGAAGAAATAGCAACGCAGAAAC 59.159 43.478 0.00 0.00 0.00 2.78
2968 3556 3.666902 GCGAAGAAATAGCAACGCAGAAA 60.667 43.478 0.00 0.00 44.29 2.52
2975 3563 6.494842 TGATAATTGGCGAAGAAATAGCAAC 58.505 36.000 0.00 0.00 0.00 4.17
2976 3564 6.691754 TGATAATTGGCGAAGAAATAGCAA 57.308 33.333 0.00 0.00 0.00 3.91
2990 3578 5.394443 CCACCCTCACAACAATGATAATTGG 60.394 44.000 7.72 0.00 35.93 3.16
2995 3583 2.916269 TCCCACCCTCACAACAATGATA 59.084 45.455 0.00 0.00 0.00 2.15
2999 3618 1.073923 GAGTCCCACCCTCACAACAAT 59.926 52.381 0.00 0.00 0.00 2.71
3019 3640 0.590195 GCACAGTGGACTCTTGCTTG 59.410 55.000 1.84 0.00 0.00 4.01
3023 3644 1.581934 TTTCGCACAGTGGACTCTTG 58.418 50.000 1.84 0.00 0.00 3.02
3044 3665 1.302285 CAGGAGCATCAGGTGGCTT 59.698 57.895 0.00 0.00 41.22 4.35
3047 3672 2.513204 CGCAGGAGCATCAGGTGG 60.513 66.667 0.00 0.00 42.27 4.61
3057 3682 1.205064 CGACAAGTTTGCGCAGGAG 59.795 57.895 11.31 2.90 0.00 3.69
3063 3688 1.083657 CCACGACGACAAGTTTGCG 60.084 57.895 0.00 6.99 35.13 4.85
3080 3705 3.942748 AGTATCTGAGAGAGTTGACGACC 59.057 47.826 0.00 0.00 0.00 4.79
3085 3710 7.451877 ACCTTTTACAGTATCTGAGAGAGTTGA 59.548 37.037 3.70 0.00 35.18 3.18
3100 3725 3.887110 CCCCGAAGAAAACCTTTTACAGT 59.113 43.478 0.00 0.00 34.68 3.55
3104 3729 3.880168 TCCCCCGAAGAAAACCTTTTA 57.120 42.857 0.00 0.00 34.68 1.52
3127 5360 2.948979 AGTGAAATTTCCAGCGTTGACA 59.051 40.909 15.48 0.00 0.00 3.58
3128 5361 3.626028 AGTGAAATTTCCAGCGTTGAC 57.374 42.857 15.48 4.54 0.00 3.18
3131 5364 3.482436 TGGTAGTGAAATTTCCAGCGTT 58.518 40.909 15.48 0.00 0.00 4.84
3132 5365 3.134574 TGGTAGTGAAATTTCCAGCGT 57.865 42.857 15.48 0.00 0.00 5.07
3134 5367 7.573968 AGATATTGGTAGTGAAATTTCCAGC 57.426 36.000 15.48 10.40 0.00 4.85
3165 5398 9.243637 GCACACACTTGATTTTCAGTTTAAATA 57.756 29.630 0.00 0.00 0.00 1.40
3166 5399 7.763528 TGCACACACTTGATTTTCAGTTTAAAT 59.236 29.630 0.00 0.00 0.00 1.40
3167 5400 7.093354 TGCACACACTTGATTTTCAGTTTAAA 58.907 30.769 0.00 0.00 0.00 1.52
3168 5401 6.625362 TGCACACACTTGATTTTCAGTTTAA 58.375 32.000 0.00 0.00 0.00 1.52
3169 5402 6.201226 TGCACACACTTGATTTTCAGTTTA 57.799 33.333 0.00 0.00 0.00 2.01
3170 5403 5.070770 TGCACACACTTGATTTTCAGTTT 57.929 34.783 0.00 0.00 0.00 2.66
3171 5404 4.717233 TGCACACACTTGATTTTCAGTT 57.283 36.364 0.00 0.00 0.00 3.16
3172 5405 4.717233 TTGCACACACTTGATTTTCAGT 57.283 36.364 0.00 0.00 0.00 3.41
3173 5406 5.283294 TGATTGCACACACTTGATTTTCAG 58.717 37.500 0.00 0.00 0.00 3.02
3175 5408 7.086376 AGTATGATTGCACACACTTGATTTTC 58.914 34.615 0.00 0.00 0.00 2.29
3176 5409 6.985117 AGTATGATTGCACACACTTGATTTT 58.015 32.000 0.00 0.00 0.00 1.82
3177 5410 6.207221 TGAGTATGATTGCACACACTTGATTT 59.793 34.615 0.00 0.00 0.00 2.17
3178 5411 5.706833 TGAGTATGATTGCACACACTTGATT 59.293 36.000 0.00 0.00 0.00 2.57
3179 5412 5.247862 TGAGTATGATTGCACACACTTGAT 58.752 37.500 0.00 0.00 0.00 2.57
3180 5413 4.640364 TGAGTATGATTGCACACACTTGA 58.360 39.130 0.00 0.00 0.00 3.02
3181 5414 5.361135 TTGAGTATGATTGCACACACTTG 57.639 39.130 0.00 0.00 0.00 3.16
3182 5415 6.579666 AATTGAGTATGATTGCACACACTT 57.420 33.333 0.00 0.00 0.00 3.16
3183 5416 6.654582 TGTAATTGAGTATGATTGCACACACT 59.345 34.615 0.00 0.00 0.00 3.55
3185 5418 7.336427 TCATGTAATTGAGTATGATTGCACACA 59.664 33.333 0.00 0.00 32.15 3.72
3186 5419 7.696755 TCATGTAATTGAGTATGATTGCACAC 58.303 34.615 0.00 0.00 32.15 3.82
3187 5420 7.467675 GCTCATGTAATTGAGTATGATTGCACA 60.468 37.037 3.65 0.00 44.10 4.57
3188 5421 6.854892 GCTCATGTAATTGAGTATGATTGCAC 59.145 38.462 3.65 0.00 44.10 4.57
3189 5422 6.769341 AGCTCATGTAATTGAGTATGATTGCA 59.231 34.615 3.65 0.00 44.10 4.08
3193 5426 8.192743 AGAGAGCTCATGTAATTGAGTATGAT 57.807 34.615 17.77 0.00 44.10 2.45
3194 5427 7.594351 AGAGAGCTCATGTAATTGAGTATGA 57.406 36.000 17.77 0.00 44.10 2.15
3195 5428 8.659925 AAAGAGAGCTCATGTAATTGAGTATG 57.340 34.615 17.77 0.00 44.10 2.39
3196 5429 9.678260 AAAAAGAGAGCTCATGTAATTGAGTAT 57.322 29.630 17.77 0.00 44.10 2.12
3197 5430 8.939929 CAAAAAGAGAGCTCATGTAATTGAGTA 58.060 33.333 17.77 0.00 44.10 2.59
3198 5431 7.574592 GCAAAAAGAGAGCTCATGTAATTGAGT 60.575 37.037 17.77 0.00 44.10 3.41
3199 5432 6.746364 GCAAAAAGAGAGCTCATGTAATTGAG 59.254 38.462 17.77 0.00 44.87 3.02
3201 5434 5.803967 GGCAAAAAGAGAGCTCATGTAATTG 59.196 40.000 17.77 13.83 0.00 2.32
3202 5435 5.105595 GGGCAAAAAGAGAGCTCATGTAATT 60.106 40.000 17.77 0.64 0.00 1.40
3203 5436 4.400567 GGGCAAAAAGAGAGCTCATGTAAT 59.599 41.667 17.77 0.00 0.00 1.89
3204 5437 3.758554 GGGCAAAAAGAGAGCTCATGTAA 59.241 43.478 17.77 0.00 0.00 2.41
3205 5438 3.009473 AGGGCAAAAAGAGAGCTCATGTA 59.991 43.478 17.77 0.00 0.00 2.29
3207 5440 2.422832 GAGGGCAAAAAGAGAGCTCATG 59.577 50.000 17.77 5.95 0.00 3.07
3208 5441 2.040813 TGAGGGCAAAAAGAGAGCTCAT 59.959 45.455 17.77 0.20 0.00 2.90
3210 5443 2.191128 TGAGGGCAAAAAGAGAGCTC 57.809 50.000 5.27 5.27 0.00 4.09
3211 5444 2.664402 TTGAGGGCAAAAAGAGAGCT 57.336 45.000 0.00 0.00 0.00 4.09
3215 5448 6.282930 TGATTTTCTTTGAGGGCAAAAAGAG 58.717 36.000 8.03 0.00 42.96 2.85
3216 5449 6.232581 TGATTTTCTTTGAGGGCAAAAAGA 57.767 33.333 4.87 4.87 42.96 2.52
3218 5451 6.315891 CACTTGATTTTCTTTGAGGGCAAAAA 59.684 34.615 0.00 0.00 42.96 1.94
3219 5452 5.816777 CACTTGATTTTCTTTGAGGGCAAAA 59.183 36.000 0.00 0.00 42.96 2.44
3221 5454 4.405358 ACACTTGATTTTCTTTGAGGGCAA 59.595 37.500 0.00 0.00 0.00 4.52
3222 5455 3.960102 ACACTTGATTTTCTTTGAGGGCA 59.040 39.130 0.00 0.00 0.00 5.36
3223 5456 4.202151 ACACACTTGATTTTCTTTGAGGGC 60.202 41.667 0.00 0.00 0.00 5.19
3224 5457 5.520376 ACACACTTGATTTTCTTTGAGGG 57.480 39.130 0.00 0.00 0.00 4.30
3225 5458 9.533253 AAAATACACACTTGATTTTCTTTGAGG 57.467 29.630 0.00 0.00 28.93 3.86
3230 5463 9.097257 CCACAAAAATACACACTTGATTTTCTT 57.903 29.630 0.00 0.00 32.88 2.52
3231 5464 8.474025 TCCACAAAAATACACACTTGATTTTCT 58.526 29.630 0.00 0.00 32.88 2.52
3232 5465 8.641499 TCCACAAAAATACACACTTGATTTTC 57.359 30.769 0.00 0.00 32.88 2.29
3235 5468 9.859427 CATATCCACAAAAATACACACTTGATT 57.141 29.630 0.00 0.00 0.00 2.57
3237 5470 8.628630 TCATATCCACAAAAATACACACTTGA 57.371 30.769 0.00 0.00 0.00 3.02
3238 5471 9.292846 CATCATATCCACAAAAATACACACTTG 57.707 33.333 0.00 0.00 0.00 3.16
3241 5474 9.853555 TTTCATCATATCCACAAAAATACACAC 57.146 29.630 0.00 0.00 0.00 3.82
3248 5481 9.993454 TCAACAATTTCATCATATCCACAAAAA 57.007 25.926 0.00 0.00 0.00 1.94
3251 5484 8.968969 TGATCAACAATTTCATCATATCCACAA 58.031 29.630 0.00 0.00 0.00 3.33
3252 5485 8.522542 TGATCAACAATTTCATCATATCCACA 57.477 30.769 0.00 0.00 0.00 4.17
3260 5493 9.984190 TTGAAGAAATGATCAACAATTTCATCA 57.016 25.926 17.23 17.23 38.28 3.07
3262 5495 9.991906 ACTTGAAGAAATGATCAACAATTTCAT 57.008 25.926 17.49 8.89 35.96 2.57
3263 5496 9.251792 CACTTGAAGAAATGATCAACAATTTCA 57.748 29.630 17.49 12.79 35.96 2.69
3264 5497 8.219105 GCACTTGAAGAAATGATCAACAATTTC 58.781 33.333 0.00 5.43 34.29 2.17
3265 5498 7.172019 GGCACTTGAAGAAATGATCAACAATTT 59.828 33.333 0.00 0.00 0.00 1.82
3266 5499 6.647895 GGCACTTGAAGAAATGATCAACAATT 59.352 34.615 0.00 0.00 0.00 2.32
3267 5500 6.161381 GGCACTTGAAGAAATGATCAACAAT 58.839 36.000 0.00 0.00 0.00 2.71
3270 5503 4.161333 CGGCACTTGAAGAAATGATCAAC 58.839 43.478 0.00 0.00 0.00 3.18
3273 5506 2.421424 AGCGGCACTTGAAGAAATGATC 59.579 45.455 1.45 0.00 0.00 2.92
3274 5507 2.440409 AGCGGCACTTGAAGAAATGAT 58.560 42.857 1.45 0.00 0.00 2.45
3275 5508 1.896220 AGCGGCACTTGAAGAAATGA 58.104 45.000 1.45 0.00 0.00 2.57
3276 5509 2.483877 TGTAGCGGCACTTGAAGAAATG 59.516 45.455 1.45 0.00 0.00 2.32
3278 5511 1.871039 GTGTAGCGGCACTTGAAGAAA 59.129 47.619 1.45 0.00 36.51 2.52
3279 5512 1.070134 AGTGTAGCGGCACTTGAAGAA 59.930 47.619 1.45 0.00 46.45 2.52
3280 5513 0.679505 AGTGTAGCGGCACTTGAAGA 59.320 50.000 1.45 0.00 46.45 2.87
3281 5514 3.217242 AGTGTAGCGGCACTTGAAG 57.783 52.632 1.45 0.00 46.45 3.02
3287 5520 1.437986 CCCTAGAGTGTAGCGGCAC 59.562 63.158 1.45 5.71 39.51 5.01
3288 5521 2.423898 GCCCTAGAGTGTAGCGGCA 61.424 63.158 16.86 0.00 36.38 5.69
3289 5522 1.677637 AAGCCCTAGAGTGTAGCGGC 61.678 60.000 15.00 15.00 36.62 6.53
3290 5523 0.824759 AAAGCCCTAGAGTGTAGCGG 59.175 55.000 0.00 0.00 0.00 5.52
3291 5524 1.471676 CCAAAGCCCTAGAGTGTAGCG 60.472 57.143 0.00 0.00 0.00 4.26
3292 5525 1.134371 CCCAAAGCCCTAGAGTGTAGC 60.134 57.143 0.00 0.00 0.00 3.58
3293 5526 1.134371 GCCCAAAGCCCTAGAGTGTAG 60.134 57.143 0.00 0.00 34.35 2.74
3295 5528 1.685820 GCCCAAAGCCCTAGAGTGT 59.314 57.895 0.00 0.00 34.35 3.55
3296 5529 4.645809 GCCCAAAGCCCTAGAGTG 57.354 61.111 0.00 0.00 34.35 3.51
3305 5538 0.603065 CAACTACCAAGGCCCAAAGC 59.397 55.000 0.00 0.00 42.60 3.51
3306 5539 2.162681 CTCAACTACCAAGGCCCAAAG 58.837 52.381 0.00 0.00 0.00 2.77
3307 5540 1.777878 TCTCAACTACCAAGGCCCAAA 59.222 47.619 0.00 0.00 0.00 3.28
3308 5541 1.440618 TCTCAACTACCAAGGCCCAA 58.559 50.000 0.00 0.00 0.00 4.12
3309 5542 1.440618 TTCTCAACTACCAAGGCCCA 58.559 50.000 0.00 0.00 0.00 5.36
3310 5543 2.579410 TTTCTCAACTACCAAGGCCC 57.421 50.000 0.00 0.00 0.00 5.80
3311 5544 4.522789 TGAAATTTCTCAACTACCAAGGCC 59.477 41.667 18.64 0.00 0.00 5.19
3315 5548 7.004086 AGGATGTGAAATTTCTCAACTACCAA 58.996 34.615 22.67 1.97 34.77 3.67
3316 5549 6.542821 AGGATGTGAAATTTCTCAACTACCA 58.457 36.000 22.67 2.61 34.77 3.25
3317 5550 7.308435 CAAGGATGTGAAATTTCTCAACTACC 58.692 38.462 22.67 20.70 34.77 3.18
3318 5551 7.308435 CCAAGGATGTGAAATTTCTCAACTAC 58.692 38.462 22.67 11.22 34.77 2.73
3319 5552 6.434028 CCCAAGGATGTGAAATTTCTCAACTA 59.566 38.462 22.67 4.20 34.77 2.24
3322 5555 5.147032 ACCCAAGGATGTGAAATTTCTCAA 58.853 37.500 22.67 8.37 34.77 3.02
3323 5556 4.739793 ACCCAAGGATGTGAAATTTCTCA 58.260 39.130 21.50 21.50 35.47 3.27
3324 5557 5.473039 CAACCCAAGGATGTGAAATTTCTC 58.527 41.667 18.64 15.35 0.00 2.87
3325 5558 4.284234 CCAACCCAAGGATGTGAAATTTCT 59.716 41.667 18.64 0.00 0.00 2.52
3326 5559 4.283212 TCCAACCCAAGGATGTGAAATTTC 59.717 41.667 11.41 11.41 0.00 2.17
3328 5561 3.578282 GTCCAACCCAAGGATGTGAAATT 59.422 43.478 0.00 0.00 37.52 1.82
3329 5562 3.165071 GTCCAACCCAAGGATGTGAAAT 58.835 45.455 0.00 0.00 37.52 2.17
3332 5565 1.144691 TGTCCAACCCAAGGATGTGA 58.855 50.000 0.00 0.00 37.52 3.58
3333 5566 1.202927 AGTGTCCAACCCAAGGATGTG 60.203 52.381 0.00 0.00 37.52 3.21
3334 5567 1.149101 AGTGTCCAACCCAAGGATGT 58.851 50.000 0.00 0.00 37.52 3.06
3336 5569 2.065799 AGAAGTGTCCAACCCAAGGAT 58.934 47.619 0.00 0.00 37.52 3.24
3337 5570 1.518367 AGAAGTGTCCAACCCAAGGA 58.482 50.000 0.00 0.00 0.00 3.36
3338 5571 2.230660 GAAGAAGTGTCCAACCCAAGG 58.769 52.381 0.00 0.00 0.00 3.61
3340 5573 1.850345 AGGAAGAAGTGTCCAACCCAA 59.150 47.619 0.00 0.00 37.65 4.12
3341 5574 1.142870 CAGGAAGAAGTGTCCAACCCA 59.857 52.381 0.00 0.00 37.65 4.51
3342 5575 1.545651 CCAGGAAGAAGTGTCCAACCC 60.546 57.143 0.00 0.00 37.65 4.11
3343 5576 1.897560 CCAGGAAGAAGTGTCCAACC 58.102 55.000 0.00 0.00 37.65 3.77
3344 5577 1.239347 GCCAGGAAGAAGTGTCCAAC 58.761 55.000 0.00 0.00 37.65 3.77
3345 5578 0.843309 TGCCAGGAAGAAGTGTCCAA 59.157 50.000 0.00 0.00 37.65 3.53
3346 5579 0.108585 GTGCCAGGAAGAAGTGTCCA 59.891 55.000 0.00 0.00 37.65 4.02
3347 5580 0.398318 AGTGCCAGGAAGAAGTGTCC 59.602 55.000 0.00 0.00 35.17 4.02
3348 5581 1.876156 CAAGTGCCAGGAAGAAGTGTC 59.124 52.381 0.00 0.00 0.00 3.67
3349 5582 1.490490 TCAAGTGCCAGGAAGAAGTGT 59.510 47.619 0.00 0.00 0.00 3.55
3351 5584 2.553904 CCATCAAGTGCCAGGAAGAAGT 60.554 50.000 0.00 0.00 0.00 3.01
3353 5586 1.704628 TCCATCAAGTGCCAGGAAGAA 59.295 47.619 0.00 0.00 0.00 2.52
3354 5587 1.003580 GTCCATCAAGTGCCAGGAAGA 59.996 52.381 0.00 0.00 0.00 2.87
3356 5589 1.003580 GAGTCCATCAAGTGCCAGGAA 59.996 52.381 0.00 0.00 0.00 3.36
3357 5590 0.615331 GAGTCCATCAAGTGCCAGGA 59.385 55.000 0.00 0.00 0.00 3.86
3359 5592 0.742281 CCGAGTCCATCAAGTGCCAG 60.742 60.000 0.00 0.00 0.00 4.85
3360 5593 1.296392 CCGAGTCCATCAAGTGCCA 59.704 57.895 0.00 0.00 0.00 4.92
3362 5595 1.375908 TGCCGAGTCCATCAAGTGC 60.376 57.895 0.00 0.00 0.00 4.40
3363 5596 0.036952 AGTGCCGAGTCCATCAAGTG 60.037 55.000 0.00 0.00 0.00 3.16
3365 5598 1.081892 CAAGTGCCGAGTCCATCAAG 58.918 55.000 0.00 0.00 0.00 3.02
3366 5599 0.684535 TCAAGTGCCGAGTCCATCAA 59.315 50.000 0.00 0.00 0.00 2.57
3368 5601 1.293924 CATCAAGTGCCGAGTCCATC 58.706 55.000 0.00 0.00 0.00 3.51
3369 5602 0.107508 CCATCAAGTGCCGAGTCCAT 60.108 55.000 0.00 0.00 0.00 3.41
3372 5605 0.247736 AGTCCATCAAGTGCCGAGTC 59.752 55.000 0.00 0.00 0.00 3.36
3373 5606 0.247736 GAGTCCATCAAGTGCCGAGT 59.752 55.000 0.00 0.00 0.00 4.18
3375 5608 1.215382 CGAGTCCATCAAGTGCCGA 59.785 57.895 0.00 0.00 0.00 5.54
3376 5609 1.811266 CCGAGTCCATCAAGTGCCG 60.811 63.158 0.00 0.00 0.00 5.69
3377 5610 0.321653 AACCGAGTCCATCAAGTGCC 60.322 55.000 0.00 0.00 0.00 5.01
3379 5612 2.455674 TCAACCGAGTCCATCAAGTG 57.544 50.000 0.00 0.00 0.00 3.16
3380 5613 2.872038 GCTTCAACCGAGTCCATCAAGT 60.872 50.000 0.00 0.00 0.00 3.16
3381 5614 1.734465 GCTTCAACCGAGTCCATCAAG 59.266 52.381 0.00 0.00 0.00 3.02
3383 5616 0.976641 AGCTTCAACCGAGTCCATCA 59.023 50.000 0.00 0.00 0.00 3.07
3384 5617 1.734465 CAAGCTTCAACCGAGTCCATC 59.266 52.381 0.00 0.00 0.00 3.51
3385 5618 1.611673 CCAAGCTTCAACCGAGTCCAT 60.612 52.381 0.00 0.00 0.00 3.41
3386 5619 0.250295 CCAAGCTTCAACCGAGTCCA 60.250 55.000 0.00 0.00 0.00 4.02
3387 5620 1.578206 GCCAAGCTTCAACCGAGTCC 61.578 60.000 0.00 0.00 0.00 3.85
3389 5622 0.886490 CTGCCAAGCTTCAACCGAGT 60.886 55.000 0.00 0.00 0.00 4.18
3392 5625 2.956987 CCTGCCAAGCTTCAACCG 59.043 61.111 0.00 0.00 0.00 4.44
3393 5626 1.747325 TTGCCTGCCAAGCTTCAACC 61.747 55.000 0.00 0.00 0.00 3.77
3394 5627 0.319297 CTTGCCTGCCAAGCTTCAAC 60.319 55.000 0.00 0.00 43.98 3.18
3395 5628 2.043625 CTTGCCTGCCAAGCTTCAA 58.956 52.632 0.00 0.00 43.98 2.69
3396 5629 3.767816 CTTGCCTGCCAAGCTTCA 58.232 55.556 0.00 0.00 43.98 3.02
3402 5635 1.833492 ACATGTGCTTGCCTGCCAA 60.833 52.632 0.00 0.00 0.00 4.52
3404 5637 2.260434 CACATGTGCTTGCCTGCC 59.740 61.111 13.94 0.00 0.00 4.85
3417 5650 4.634703 TTGTGTCCCGCGGCACAT 62.635 61.111 30.62 0.00 43.89 3.21
3418 5651 4.858680 TTTGTGTCCCGCGGCACA 62.859 61.111 27.87 27.87 42.95 4.57
3419 5652 2.414840 AATTTTGTGTCCCGCGGCAC 62.415 55.000 22.85 23.52 36.26 5.01
3420 5653 2.196925 AATTTTGTGTCCCGCGGCA 61.197 52.632 22.85 11.13 0.00 5.69
3421 5654 1.732683 CAATTTTGTGTCCCGCGGC 60.733 57.895 22.85 7.92 0.00 6.53
3423 5656 0.309302 TGTCAATTTTGTGTCCCGCG 59.691 50.000 0.00 0.00 0.00 6.46
3424 5657 2.393764 CTTGTCAATTTTGTGTCCCGC 58.606 47.619 0.00 0.00 0.00 6.13
3426 5659 3.451141 TGCTTGTCAATTTTGTGTCCC 57.549 42.857 0.00 0.00 0.00 4.46
3427 5660 3.803778 CCTTGCTTGTCAATTTTGTGTCC 59.196 43.478 0.00 0.00 33.57 4.02
3428 5661 3.245990 GCCTTGCTTGTCAATTTTGTGTC 59.754 43.478 0.00 0.00 33.57 3.67
3429 5662 3.197265 GCCTTGCTTGTCAATTTTGTGT 58.803 40.909 0.00 0.00 33.57 3.72
3431 5664 2.435437 AGGCCTTGCTTGTCAATTTTGT 59.565 40.909 0.00 0.00 33.57 2.83
3434 5667 1.620323 GGAGGCCTTGCTTGTCAATTT 59.380 47.619 6.77 0.00 33.57 1.82
3436 5669 0.613012 GGGAGGCCTTGCTTGTCAAT 60.613 55.000 6.77 0.00 33.57 2.57
3437 5670 1.228552 GGGAGGCCTTGCTTGTCAA 60.229 57.895 6.77 0.00 0.00 3.18
3438 5671 2.436109 GGGAGGCCTTGCTTGTCA 59.564 61.111 6.77 0.00 0.00 3.58
3439 5672 1.973812 GTGGGAGGCCTTGCTTGTC 60.974 63.158 6.77 0.00 0.00 3.18
3440 5673 2.116125 GTGGGAGGCCTTGCTTGT 59.884 61.111 6.77 0.00 0.00 3.16
3441 5674 2.115910 TGTGGGAGGCCTTGCTTG 59.884 61.111 6.77 0.00 0.00 4.01
3442 5675 2.116125 GTGTGGGAGGCCTTGCTT 59.884 61.111 6.77 0.00 0.00 3.91
3443 5676 3.971702 GGTGTGGGAGGCCTTGCT 61.972 66.667 6.77 0.00 0.00 3.91
3446 5679 2.765969 CATGGTGTGGGAGGCCTT 59.234 61.111 6.77 0.00 0.00 4.35
3447 5680 4.052518 GCATGGTGTGGGAGGCCT 62.053 66.667 3.86 3.86 0.00 5.19
3448 5681 3.590466 AAGCATGGTGTGGGAGGCC 62.590 63.158 0.00 0.00 0.00 5.19
3449 5682 2.036256 AAGCATGGTGTGGGAGGC 59.964 61.111 0.00 0.00 0.00 4.70
3451 5684 2.260247 CACAAGCATGGTGTGGGAG 58.740 57.895 15.37 0.00 42.20 4.30
3452 5685 4.498346 CACAAGCATGGTGTGGGA 57.502 55.556 15.37 0.00 42.20 4.37
3456 5689 1.165907 CCACGACACAAGCATGGTGT 61.166 55.000 5.99 5.99 0.00 4.16
3457 5690 0.884259 TCCACGACACAAGCATGGTG 60.884 55.000 0.00 0.00 0.00 4.17
3458 5691 0.036732 ATCCACGACACAAGCATGGT 59.963 50.000 0.00 0.00 0.00 3.55
3459 5692 2.022764 TATCCACGACACAAGCATGG 57.977 50.000 0.00 0.00 0.00 3.66
3460 5693 4.621068 AATTATCCACGACACAAGCATG 57.379 40.909 0.00 0.00 0.00 4.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.