Multiple sequence alignment - TraesCS2B01G116900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G116900 chr2B 100.000 4059 0 0 1 4059 80123681 80119623 0.000000e+00 7496.0
1 TraesCS2B01G116900 chr2B 80.571 175 33 1 1 175 749225800 749225627 2.550000e-27 134.0
2 TraesCS2B01G116900 chr2A 88.958 3876 226 87 300 4039 52666888 52663079 0.000000e+00 4601.0
3 TraesCS2B01G116900 chr2A 82.143 112 15 2 3169 3279 52590930 52590823 1.550000e-14 91.6
4 TraesCS2B01G116900 chr2D 91.165 3305 153 57 310 3523 51193933 51190677 0.000000e+00 4357.0
5 TraesCS2B01G116900 chr2D 82.697 393 29 21 3640 4019 51190551 51190185 3.050000e-81 313.0
6 TraesCS2B01G116900 chr2D 76.322 435 69 24 3646 4054 51173961 51173535 6.880000e-48 202.0
7 TraesCS2B01G116900 chr2D 78.531 177 33 5 1 175 47428930 47428757 1.190000e-20 111.0
8 TraesCS2B01G116900 chr4A 83.152 825 116 21 1247 2064 168792300 168793108 0.000000e+00 732.0
9 TraesCS2B01G116900 chr4A 81.673 251 28 12 754 997 413310716 413310955 4.140000e-45 193.0
10 TraesCS2B01G116900 chr4B 82.483 862 120 27 1247 2097 384292787 384291946 0.000000e+00 726.0
11 TraesCS2B01G116900 chr4B 80.690 290 31 15 723 997 285906288 285906567 6.880000e-48 202.0
12 TraesCS2B01G116900 chr4D 81.882 861 127 25 1247 2097 308371490 308370649 0.000000e+00 699.0
13 TraesCS2B01G116900 chr1D 80.093 216 34 9 1 211 393399015 393399226 7.030000e-33 152.0
14 TraesCS2B01G116900 chr5D 76.753 271 56 5 1 266 373778397 373778665 1.180000e-30 145.0
15 TraesCS2B01G116900 chr5D 79.389 131 27 0 48 178 397657609 397657479 4.320000e-15 93.5
16 TraesCS2B01G116900 chr3A 78.099 242 41 9 1 236 8657590 8657825 4.230000e-30 143.0
17 TraesCS2B01G116900 chr1A 79.904 209 27 7 1 198 393509795 393509999 5.470000e-29 139.0
18 TraesCS2B01G116900 chr3D 86.869 99 13 0 6 104 188414879 188414977 1.190000e-20 111.0
19 TraesCS2B01G116900 chr7A 89.552 67 5 2 877 942 9253136 9253071 2.600000e-12 84.2
20 TraesCS2B01G116900 chr5B 81.905 105 13 5 1 103 658539304 658539404 2.600000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G116900 chr2B 80119623 80123681 4058 True 7496 7496 100.000 1 4059 1 chr2B.!!$R1 4058
1 TraesCS2B01G116900 chr2A 52663079 52666888 3809 True 4601 4601 88.958 300 4039 1 chr2A.!!$R2 3739
2 TraesCS2B01G116900 chr2D 51190185 51193933 3748 True 2335 4357 86.931 310 4019 2 chr2D.!!$R3 3709
3 TraesCS2B01G116900 chr4A 168792300 168793108 808 False 732 732 83.152 1247 2064 1 chr4A.!!$F1 817
4 TraesCS2B01G116900 chr4B 384291946 384292787 841 True 726 726 82.483 1247 2097 1 chr4B.!!$R1 850
5 TraesCS2B01G116900 chr4D 308370649 308371490 841 True 699 699 81.882 1247 2097 1 chr4D.!!$R1 850

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
96 97 0.034896 GGAGAAGTGGCGGAGTGAAA 59.965 55.000 0.00 0.00 0.00 2.69 F
799 887 0.037512 TTTTCGGCCGGTCGATTGTA 60.038 50.000 34.25 15.28 39.03 2.41 F
919 1031 1.077169 TCTTGCCACTCTAGAGTCCCA 59.923 52.381 22.76 18.14 40.20 4.37 F
2539 2679 0.246910 GTCGTCCTTCTTCCCTGGTC 59.753 60.000 0.00 0.00 0.00 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1143 1262 2.694760 GCAGCCGGCTCCAAAGAAG 61.695 63.158 30.29 14.45 40.25 2.85 R
2470 2610 0.109723 GGGTTGTTGTACCTGCAGGA 59.890 55.000 39.19 19.62 38.30 3.86 R
2737 2883 1.806542 CTGCTGCATAAGGTTGTTCGT 59.193 47.619 1.31 0.00 0.00 3.85 R
4021 4242 0.531200 GACCGATTGAAGAGGACCGT 59.469 55.000 0.00 0.00 0.00 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.353600 TCCGGCAATGCTTGTGTG 58.646 55.556 4.82 0.00 0.00 3.82
18 19 2.259204 CCGGCAATGCTTGTGTGG 59.741 61.111 4.82 0.00 0.00 4.17
19 20 2.431260 CGGCAATGCTTGTGTGGC 60.431 61.111 4.82 0.00 34.67 5.01
20 21 2.431260 GGCAATGCTTGTGTGGCG 60.431 61.111 4.82 0.00 0.00 5.69
21 22 2.431260 GCAATGCTTGTGTGGCGG 60.431 61.111 0.00 0.00 0.00 6.13
22 23 2.431260 CAATGCTTGTGTGGCGGC 60.431 61.111 0.00 0.00 0.00 6.53
23 24 3.683937 AATGCTTGTGTGGCGGCC 61.684 61.111 13.32 13.32 0.00 6.13
35 36 3.766691 GCGGCCGGAGAGGTACAA 61.767 66.667 29.38 0.00 43.70 2.41
36 37 2.183555 CGGCCGGAGAGGTACAAC 59.816 66.667 20.10 0.00 43.70 3.32
37 38 2.642254 CGGCCGGAGAGGTACAACA 61.642 63.158 20.10 0.00 43.70 3.33
38 39 1.218316 GGCCGGAGAGGTACAACAG 59.782 63.158 5.05 0.00 43.70 3.16
39 40 1.448013 GCCGGAGAGGTACAACAGC 60.448 63.158 5.05 0.00 43.70 4.40
40 41 1.153823 CCGGAGAGGTACAACAGCG 60.154 63.158 0.00 0.00 34.51 5.18
41 42 1.592400 CCGGAGAGGTACAACAGCGA 61.592 60.000 0.00 0.00 34.51 4.93
42 43 0.456312 CGGAGAGGTACAACAGCGAC 60.456 60.000 0.00 0.00 0.00 5.19
43 44 0.456312 GGAGAGGTACAACAGCGACG 60.456 60.000 0.00 0.00 0.00 5.12
44 45 0.520404 GAGAGGTACAACAGCGACGA 59.480 55.000 0.00 0.00 0.00 4.20
45 46 0.240411 AGAGGTACAACAGCGACGAC 59.760 55.000 0.00 0.00 0.00 4.34
46 47 0.039798 GAGGTACAACAGCGACGACA 60.040 55.000 0.00 0.00 0.00 4.35
47 48 0.039437 AGGTACAACAGCGACGACAG 60.039 55.000 0.00 0.00 0.00 3.51
48 49 0.039798 GGTACAACAGCGACGACAGA 60.040 55.000 0.00 0.00 0.00 3.41
49 50 1.328439 GTACAACAGCGACGACAGAG 58.672 55.000 0.00 0.00 0.00 3.35
50 51 0.949397 TACAACAGCGACGACAGAGT 59.051 50.000 0.00 0.00 0.00 3.24
51 52 0.102481 ACAACAGCGACGACAGAGTT 59.898 50.000 0.00 0.00 0.00 3.01
52 53 0.504384 CAACAGCGACGACAGAGTTG 59.496 55.000 0.00 1.67 0.00 3.16
53 54 0.597637 AACAGCGACGACAGAGTTGG 60.598 55.000 0.00 0.00 0.00 3.77
54 55 1.285950 CAGCGACGACAGAGTTGGA 59.714 57.895 0.00 0.00 0.00 3.53
55 56 0.730834 CAGCGACGACAGAGTTGGAG 60.731 60.000 0.00 0.00 0.00 3.86
56 57 1.444553 GCGACGACAGAGTTGGAGG 60.445 63.158 0.00 0.00 0.00 4.30
57 58 1.213013 CGACGACAGAGTTGGAGGG 59.787 63.158 0.00 0.00 0.00 4.30
58 59 1.524863 CGACGACAGAGTTGGAGGGT 61.525 60.000 0.00 0.00 0.00 4.34
59 60 0.038159 GACGACAGAGTTGGAGGGTG 60.038 60.000 0.00 0.00 0.00 4.61
60 61 1.374758 CGACAGAGTTGGAGGGTGC 60.375 63.158 0.00 0.00 0.00 5.01
61 62 1.374758 GACAGAGTTGGAGGGTGCG 60.375 63.158 0.00 0.00 0.00 5.34
62 63 2.046892 CAGAGTTGGAGGGTGCGG 60.047 66.667 0.00 0.00 0.00 5.69
63 64 2.203788 AGAGTTGGAGGGTGCGGA 60.204 61.111 0.00 0.00 0.00 5.54
64 65 1.613630 AGAGTTGGAGGGTGCGGAT 60.614 57.895 0.00 0.00 0.00 4.18
65 66 1.450312 GAGTTGGAGGGTGCGGATG 60.450 63.158 0.00 0.00 0.00 3.51
66 67 3.134127 GTTGGAGGGTGCGGATGC 61.134 66.667 0.00 0.00 43.20 3.91
78 79 1.017387 GCGGATGCAAAGTAAGAGGG 58.983 55.000 0.00 0.00 42.15 4.30
79 80 1.406887 GCGGATGCAAAGTAAGAGGGA 60.407 52.381 0.00 0.00 42.15 4.20
80 81 2.555199 CGGATGCAAAGTAAGAGGGAG 58.445 52.381 0.00 0.00 0.00 4.30
81 82 2.168521 CGGATGCAAAGTAAGAGGGAGA 59.831 50.000 0.00 0.00 0.00 3.71
82 83 3.369471 CGGATGCAAAGTAAGAGGGAGAA 60.369 47.826 0.00 0.00 0.00 2.87
83 84 4.195416 GGATGCAAAGTAAGAGGGAGAAG 58.805 47.826 0.00 0.00 0.00 2.85
84 85 4.323868 GGATGCAAAGTAAGAGGGAGAAGT 60.324 45.833 0.00 0.00 0.00 3.01
85 86 4.008074 TGCAAAGTAAGAGGGAGAAGTG 57.992 45.455 0.00 0.00 0.00 3.16
86 87 3.244561 TGCAAAGTAAGAGGGAGAAGTGG 60.245 47.826 0.00 0.00 0.00 4.00
87 88 3.339141 CAAAGTAAGAGGGAGAAGTGGC 58.661 50.000 0.00 0.00 0.00 5.01
88 89 1.187087 AGTAAGAGGGAGAAGTGGCG 58.813 55.000 0.00 0.00 0.00 5.69
89 90 0.175989 GTAAGAGGGAGAAGTGGCGG 59.824 60.000 0.00 0.00 0.00 6.13
90 91 0.040646 TAAGAGGGAGAAGTGGCGGA 59.959 55.000 0.00 0.00 0.00 5.54
91 92 1.261238 AAGAGGGAGAAGTGGCGGAG 61.261 60.000 0.00 0.00 0.00 4.63
92 93 1.985116 GAGGGAGAAGTGGCGGAGT 60.985 63.158 0.00 0.00 0.00 3.85
93 94 2.232298 GAGGGAGAAGTGGCGGAGTG 62.232 65.000 0.00 0.00 0.00 3.51
94 95 2.283529 GGGAGAAGTGGCGGAGTGA 61.284 63.158 0.00 0.00 0.00 3.41
95 96 1.671742 GGAGAAGTGGCGGAGTGAA 59.328 57.895 0.00 0.00 0.00 3.18
96 97 0.034896 GGAGAAGTGGCGGAGTGAAA 59.965 55.000 0.00 0.00 0.00 2.69
97 98 1.433534 GAGAAGTGGCGGAGTGAAAG 58.566 55.000 0.00 0.00 0.00 2.62
98 99 1.000955 GAGAAGTGGCGGAGTGAAAGA 59.999 52.381 0.00 0.00 0.00 2.52
99 100 1.416401 AGAAGTGGCGGAGTGAAAGAA 59.584 47.619 0.00 0.00 0.00 2.52
100 101 2.158813 AGAAGTGGCGGAGTGAAAGAAA 60.159 45.455 0.00 0.00 0.00 2.52
101 102 2.341846 AGTGGCGGAGTGAAAGAAAA 57.658 45.000 0.00 0.00 0.00 2.29
102 103 2.863809 AGTGGCGGAGTGAAAGAAAAT 58.136 42.857 0.00 0.00 0.00 1.82
103 104 2.554032 AGTGGCGGAGTGAAAGAAAATG 59.446 45.455 0.00 0.00 0.00 2.32
104 105 2.552315 GTGGCGGAGTGAAAGAAAATGA 59.448 45.455 0.00 0.00 0.00 2.57
105 106 2.813754 TGGCGGAGTGAAAGAAAATGAG 59.186 45.455 0.00 0.00 0.00 2.90
106 107 2.162408 GGCGGAGTGAAAGAAAATGAGG 59.838 50.000 0.00 0.00 0.00 3.86
107 108 2.414691 GCGGAGTGAAAGAAAATGAGGC 60.415 50.000 0.00 0.00 0.00 4.70
108 109 2.162408 CGGAGTGAAAGAAAATGAGGCC 59.838 50.000 0.00 0.00 0.00 5.19
109 110 2.162408 GGAGTGAAAGAAAATGAGGCCG 59.838 50.000 0.00 0.00 0.00 6.13
110 111 3.074412 GAGTGAAAGAAAATGAGGCCGA 58.926 45.455 0.00 0.00 0.00 5.54
111 112 3.486383 AGTGAAAGAAAATGAGGCCGAA 58.514 40.909 0.00 0.00 0.00 4.30
112 113 3.888930 AGTGAAAGAAAATGAGGCCGAAA 59.111 39.130 0.00 0.00 0.00 3.46
113 114 4.022849 AGTGAAAGAAAATGAGGCCGAAAG 60.023 41.667 0.00 0.00 0.00 2.62
128 129 2.365582 CGAAAGGGTGGATTTAGTGGG 58.634 52.381 0.00 0.00 0.00 4.61
129 130 2.100197 GAAAGGGTGGATTTAGTGGGC 58.900 52.381 0.00 0.00 0.00 5.36
130 131 0.335019 AAGGGTGGATTTAGTGGGCC 59.665 55.000 0.00 0.00 0.00 5.80
131 132 0.552615 AGGGTGGATTTAGTGGGCCT 60.553 55.000 4.53 0.00 0.00 5.19
132 133 0.395724 GGGTGGATTTAGTGGGCCTG 60.396 60.000 4.53 0.00 0.00 4.85
133 134 0.395724 GGTGGATTTAGTGGGCCTGG 60.396 60.000 4.53 0.00 0.00 4.45
134 135 0.395724 GTGGATTTAGTGGGCCTGGG 60.396 60.000 4.53 0.00 0.00 4.45
135 136 1.230212 GGATTTAGTGGGCCTGGGG 59.770 63.158 4.53 0.00 0.00 4.96
136 137 1.580994 GGATTTAGTGGGCCTGGGGT 61.581 60.000 4.53 0.00 0.00 4.95
137 138 0.395724 GATTTAGTGGGCCTGGGGTG 60.396 60.000 4.53 0.00 0.00 4.61
138 139 1.146544 ATTTAGTGGGCCTGGGGTGT 61.147 55.000 4.53 0.00 0.00 4.16
139 140 1.365105 TTTAGTGGGCCTGGGGTGTT 61.365 55.000 4.53 0.00 0.00 3.32
140 141 2.075355 TTAGTGGGCCTGGGGTGTTG 62.075 60.000 4.53 0.00 0.00 3.33
141 142 4.994756 GTGGGCCTGGGGTGTTGG 62.995 72.222 4.53 0.00 0.00 3.77
143 144 3.909651 GGGCCTGGGGTGTTGGAA 61.910 66.667 0.84 0.00 0.00 3.53
144 145 2.445155 GGCCTGGGGTGTTGGAAT 59.555 61.111 0.00 0.00 0.00 3.01
145 146 1.682344 GGCCTGGGGTGTTGGAATC 60.682 63.158 0.00 0.00 0.00 2.52
146 147 1.682344 GCCTGGGGTGTTGGAATCC 60.682 63.158 0.00 0.00 0.00 3.01
147 148 1.773635 CCTGGGGTGTTGGAATCCA 59.226 57.895 0.00 0.00 0.00 3.41
148 149 0.114168 CCTGGGGTGTTGGAATCCAA 59.886 55.000 11.23 11.23 41.69 3.53
157 158 1.816074 TTGGAATCCAACGTGGCTAC 58.184 50.000 11.23 0.00 38.75 3.58
158 159 0.981183 TGGAATCCAACGTGGCTACT 59.019 50.000 0.00 0.00 37.47 2.57
159 160 1.338674 TGGAATCCAACGTGGCTACTG 60.339 52.381 0.00 0.00 37.47 2.74
160 161 1.338769 GGAATCCAACGTGGCTACTGT 60.339 52.381 0.00 0.00 37.47 3.55
161 162 2.000447 GAATCCAACGTGGCTACTGTC 59.000 52.381 0.00 0.00 37.47 3.51
162 163 1.267121 ATCCAACGTGGCTACTGTCT 58.733 50.000 0.00 0.00 37.47 3.41
163 164 1.913778 TCCAACGTGGCTACTGTCTA 58.086 50.000 0.00 0.00 37.47 2.59
164 165 1.816835 TCCAACGTGGCTACTGTCTAG 59.183 52.381 0.00 0.00 37.47 2.43
165 166 1.816835 CCAACGTGGCTACTGTCTAGA 59.183 52.381 0.00 0.00 0.00 2.43
166 167 2.415625 CCAACGTGGCTACTGTCTAGAC 60.416 54.545 16.32 16.32 0.00 2.59
167 168 2.488545 CAACGTGGCTACTGTCTAGACT 59.511 50.000 23.01 7.13 0.00 3.24
168 169 2.358015 ACGTGGCTACTGTCTAGACTC 58.642 52.381 23.01 7.56 0.00 3.36
169 170 1.671845 CGTGGCTACTGTCTAGACTCC 59.328 57.143 23.01 15.32 0.00 3.85
170 171 2.025898 GTGGCTACTGTCTAGACTCCC 58.974 57.143 23.01 15.08 0.00 4.30
171 172 1.310904 GGCTACTGTCTAGACTCCCG 58.689 60.000 23.01 11.40 0.00 5.14
172 173 0.664224 GCTACTGTCTAGACTCCCGC 59.336 60.000 23.01 15.87 0.00 6.13
173 174 2.017623 GCTACTGTCTAGACTCCCGCA 61.018 57.143 23.01 1.44 0.00 5.69
174 175 2.366533 CTACTGTCTAGACTCCCGCAA 58.633 52.381 23.01 0.63 0.00 4.85
175 176 0.889306 ACTGTCTAGACTCCCGCAAC 59.111 55.000 23.01 0.00 0.00 4.17
176 177 0.173708 CTGTCTAGACTCCCGCAACC 59.826 60.000 23.01 0.00 0.00 3.77
177 178 1.255667 TGTCTAGACTCCCGCAACCC 61.256 60.000 23.01 0.00 0.00 4.11
178 179 1.684734 TCTAGACTCCCGCAACCCC 60.685 63.158 0.00 0.00 0.00 4.95
179 180 2.686106 TAGACTCCCGCAACCCCC 60.686 66.667 0.00 0.00 0.00 5.40
200 201 3.721087 CCCCCTATCTTCACTTTGTGT 57.279 47.619 0.00 0.00 34.79 3.72
213 214 4.989279 ACTTTGTGTGAGAAAGTGCATT 57.011 36.364 0.00 0.00 41.16 3.56
214 215 4.925068 ACTTTGTGTGAGAAAGTGCATTC 58.075 39.130 0.00 0.00 41.16 2.67
215 216 3.607422 TTGTGTGAGAAAGTGCATTCG 57.393 42.857 0.00 0.00 34.46 3.34
216 217 2.832563 TGTGTGAGAAAGTGCATTCGA 58.167 42.857 0.00 0.00 34.46 3.71
217 218 3.202097 TGTGTGAGAAAGTGCATTCGAA 58.798 40.909 0.00 0.00 34.46 3.71
218 219 3.002246 TGTGTGAGAAAGTGCATTCGAAC 59.998 43.478 0.00 0.00 34.46 3.95
219 220 3.002246 GTGTGAGAAAGTGCATTCGAACA 59.998 43.478 0.00 0.00 34.46 3.18
220 221 3.248363 TGTGAGAAAGTGCATTCGAACAG 59.752 43.478 0.00 0.00 34.46 3.16
221 222 2.224079 TGAGAAAGTGCATTCGAACAGC 59.776 45.455 15.40 15.40 34.46 4.40
222 223 1.537202 AGAAAGTGCATTCGAACAGCC 59.463 47.619 18.43 11.47 34.46 4.85
223 224 0.238289 AAAGTGCATTCGAACAGCCG 59.762 50.000 18.43 0.09 0.00 5.52
224 225 0.602638 AAGTGCATTCGAACAGCCGA 60.603 50.000 18.43 2.04 36.70 5.54
225 226 1.016130 AGTGCATTCGAACAGCCGAG 61.016 55.000 18.43 0.00 39.90 4.63
226 227 2.390599 TGCATTCGAACAGCCGAGC 61.391 57.895 18.43 7.57 39.90 5.03
227 228 2.103042 GCATTCGAACAGCCGAGCT 61.103 57.895 12.15 0.00 40.77 4.09
236 237 3.121019 AGCCGAGCTGACCGATAC 58.879 61.111 0.00 0.00 37.57 2.24
237 238 1.753078 AGCCGAGCTGACCGATACA 60.753 57.895 0.00 0.00 37.57 2.29
238 239 1.141019 GCCGAGCTGACCGATACAA 59.859 57.895 0.00 0.00 0.00 2.41
239 240 0.872021 GCCGAGCTGACCGATACAAG 60.872 60.000 0.00 0.00 0.00 3.16
240 241 0.872021 CCGAGCTGACCGATACAAGC 60.872 60.000 0.00 0.00 0.00 4.01
241 242 0.872021 CGAGCTGACCGATACAAGCC 60.872 60.000 0.00 0.00 0.00 4.35
242 243 0.872021 GAGCTGACCGATACAAGCCG 60.872 60.000 0.00 0.00 0.00 5.52
247 248 4.609995 CCGATACAAGCCGGTGTT 57.390 55.556 1.90 0.00 40.78 3.32
248 249 2.086510 CCGATACAAGCCGGTGTTG 58.913 57.895 14.96 14.96 40.78 3.33
249 250 1.366111 CCGATACAAGCCGGTGTTGG 61.366 60.000 19.16 9.15 40.78 3.77
250 251 0.390603 CGATACAAGCCGGTGTTGGA 60.391 55.000 19.16 13.33 32.75 3.53
251 252 1.742411 CGATACAAGCCGGTGTTGGAT 60.742 52.381 14.38 14.38 30.63 3.41
252 253 1.670811 GATACAAGCCGGTGTTGGATG 59.329 52.381 18.19 3.99 27.91 3.51
253 254 0.687920 TACAAGCCGGTGTTGGATGA 59.312 50.000 19.16 3.33 32.75 2.92
254 255 0.889186 ACAAGCCGGTGTTGGATGAC 60.889 55.000 19.16 0.00 0.00 3.06
255 256 0.606401 CAAGCCGGTGTTGGATGACT 60.606 55.000 1.90 0.00 0.00 3.41
256 257 0.110486 AAGCCGGTGTTGGATGACTT 59.890 50.000 1.90 0.00 0.00 3.01
257 258 0.110486 AGCCGGTGTTGGATGACTTT 59.890 50.000 1.90 0.00 0.00 2.66
258 259 0.958822 GCCGGTGTTGGATGACTTTT 59.041 50.000 1.90 0.00 0.00 2.27
259 260 1.335872 GCCGGTGTTGGATGACTTTTG 60.336 52.381 1.90 0.00 0.00 2.44
260 261 1.953686 CCGGTGTTGGATGACTTTTGT 59.046 47.619 0.00 0.00 0.00 2.83
261 262 2.287547 CCGGTGTTGGATGACTTTTGTG 60.288 50.000 0.00 0.00 0.00 3.33
262 263 2.287547 CGGTGTTGGATGACTTTTGTGG 60.288 50.000 0.00 0.00 0.00 4.17
263 264 2.693074 GGTGTTGGATGACTTTTGTGGT 59.307 45.455 0.00 0.00 0.00 4.16
264 265 3.243401 GGTGTTGGATGACTTTTGTGGTC 60.243 47.826 0.00 0.00 0.00 4.02
265 266 2.955660 TGTTGGATGACTTTTGTGGTCC 59.044 45.455 0.00 0.00 34.77 4.46
266 267 1.890876 TGGATGACTTTTGTGGTCCG 58.109 50.000 0.00 0.00 36.12 4.79
267 268 1.165270 GGATGACTTTTGTGGTCCGG 58.835 55.000 0.00 0.00 33.22 5.14
268 269 1.271163 GGATGACTTTTGTGGTCCGGA 60.271 52.381 0.00 0.00 33.22 5.14
269 270 2.618045 GGATGACTTTTGTGGTCCGGAT 60.618 50.000 7.81 0.00 33.22 4.18
270 271 1.890876 TGACTTTTGTGGTCCGGATG 58.109 50.000 7.81 0.00 33.22 3.51
271 272 1.142060 TGACTTTTGTGGTCCGGATGT 59.858 47.619 7.81 0.00 33.22 3.06
272 273 2.227194 GACTTTTGTGGTCCGGATGTT 58.773 47.619 7.81 0.00 0.00 2.71
273 274 2.621526 GACTTTTGTGGTCCGGATGTTT 59.378 45.455 7.81 0.00 0.00 2.83
274 275 2.360801 ACTTTTGTGGTCCGGATGTTTG 59.639 45.455 7.81 0.00 0.00 2.93
275 276 0.671251 TTTGTGGTCCGGATGTTTGC 59.329 50.000 7.81 0.00 0.00 3.68
276 277 0.466372 TTGTGGTCCGGATGTTTGCA 60.466 50.000 7.81 0.00 0.00 4.08
277 278 0.888736 TGTGGTCCGGATGTTTGCAG 60.889 55.000 7.81 0.00 0.00 4.41
278 279 1.303236 TGGTCCGGATGTTTGCAGG 60.303 57.895 7.81 0.00 0.00 4.85
279 280 1.002624 GGTCCGGATGTTTGCAGGA 60.003 57.895 7.81 0.00 0.00 3.86
280 281 0.394352 GGTCCGGATGTTTGCAGGAT 60.394 55.000 7.81 0.00 33.15 3.24
281 282 1.134220 GGTCCGGATGTTTGCAGGATA 60.134 52.381 7.81 0.00 33.15 2.59
282 283 2.487265 GGTCCGGATGTTTGCAGGATAT 60.487 50.000 7.81 0.00 33.15 1.63
283 284 3.214328 GTCCGGATGTTTGCAGGATATT 58.786 45.455 7.81 0.00 33.15 1.28
284 285 3.632145 GTCCGGATGTTTGCAGGATATTT 59.368 43.478 7.81 0.00 33.15 1.40
285 286 3.631686 TCCGGATGTTTGCAGGATATTTG 59.368 43.478 0.00 0.00 0.00 2.32
286 287 3.631686 CCGGATGTTTGCAGGATATTTGA 59.368 43.478 0.00 0.00 0.00 2.69
287 288 4.279169 CCGGATGTTTGCAGGATATTTGAT 59.721 41.667 0.00 0.00 0.00 2.57
288 289 5.221303 CCGGATGTTTGCAGGATATTTGATT 60.221 40.000 0.00 0.00 0.00 2.57
289 290 6.016360 CCGGATGTTTGCAGGATATTTGATTA 60.016 38.462 0.00 0.00 0.00 1.75
290 291 7.424803 CGGATGTTTGCAGGATATTTGATTAA 58.575 34.615 0.00 0.00 0.00 1.40
291 292 7.592533 CGGATGTTTGCAGGATATTTGATTAAG 59.407 37.037 0.00 0.00 0.00 1.85
292 293 8.632679 GGATGTTTGCAGGATATTTGATTAAGA 58.367 33.333 0.00 0.00 0.00 2.10
294 295 9.807649 ATGTTTGCAGGATATTTGATTAAGAAC 57.192 29.630 0.00 0.00 0.00 3.01
295 296 9.023962 TGTTTGCAGGATATTTGATTAAGAACT 57.976 29.630 0.00 0.00 0.00 3.01
296 297 9.860898 GTTTGCAGGATATTTGATTAAGAACTT 57.139 29.630 0.00 0.00 0.00 2.66
299 300 9.466497 TGCAGGATATTTGATTAAGAACTTTCT 57.534 29.630 0.00 0.00 39.74 2.52
336 337 3.568007 TCTTGGTGTTATGGTTGCACTTC 59.432 43.478 0.00 0.00 33.96 3.01
340 341 3.305335 GGTGTTATGGTTGCACTTCAAGG 60.305 47.826 0.00 0.00 34.91 3.61
384 385 4.873827 TGAAACGCTGTAAACTTTCAGTCT 59.126 37.500 0.00 0.00 34.57 3.24
389 390 4.034048 CGCTGTAAACTTTCAGTCTGTTGT 59.966 41.667 0.00 0.00 34.57 3.32
421 422 4.943142 TGAGCAAAAGCAAAACCAAAAG 57.057 36.364 0.00 0.00 0.00 2.27
663 718 0.758685 CTCCTCGCCTCCTCCTCATT 60.759 60.000 0.00 0.00 0.00 2.57
750 825 4.184629 CGATCGATTTCACTTTTCCCTCT 58.815 43.478 10.26 0.00 0.00 3.69
752 827 4.891992 TCGATTTCACTTTTCCCTCTCT 57.108 40.909 0.00 0.00 0.00 3.10
770 858 2.700897 CTCTATCCAACCAAGATCCCGT 59.299 50.000 0.00 0.00 0.00 5.28
788 876 1.487482 GTTTGCTTCACTTTTCGGCC 58.513 50.000 0.00 0.00 0.00 6.13
798 886 1.296056 CTTTTCGGCCGGTCGATTGT 61.296 55.000 34.25 0.00 39.03 2.71
799 887 0.037512 TTTTCGGCCGGTCGATTGTA 60.038 50.000 34.25 15.28 39.03 2.41
863 958 1.608025 GCAAACTCTGATCCGTGTCCA 60.608 52.381 0.00 0.00 0.00 4.02
872 979 1.401905 GATCCGTGTCCATTTCTTGGC 59.598 52.381 0.00 0.00 46.01 4.52
903 1015 1.517694 GCATGGGCGCATGTTCTTG 60.518 57.895 35.36 18.16 35.16 3.02
918 1030 1.853963 TCTTGCCACTCTAGAGTCCC 58.146 55.000 22.76 15.87 40.20 4.46
919 1031 1.077169 TCTTGCCACTCTAGAGTCCCA 59.923 52.381 22.76 18.14 40.20 4.37
920 1032 2.114616 CTTGCCACTCTAGAGTCCCAT 58.885 52.381 22.76 0.00 40.20 4.00
921 1033 3.052869 TCTTGCCACTCTAGAGTCCCATA 60.053 47.826 22.76 10.51 40.20 2.74
934 1046 4.706842 AGTCCCATACTCACTGTTGTTT 57.293 40.909 0.00 0.00 30.33 2.83
991 1103 1.241990 TAGACTTCGGTGCTGCGAGT 61.242 55.000 0.00 0.00 0.00 4.18
997 1109 3.426568 GGTGCTGCGAGTCTTGCC 61.427 66.667 9.69 0.00 0.00 4.52
1143 1262 2.509561 GTCGAGAAGGGCTTCGGC 60.510 66.667 0.00 0.00 43.97 5.54
1194 1313 4.065281 GACCTCGTGGACCCCGTG 62.065 72.222 11.17 0.00 37.04 4.94
1195 1314 4.608774 ACCTCGTGGACCCCGTGA 62.609 66.667 11.17 0.00 37.04 4.35
1196 1315 4.065281 CCTCGTGGACCCCGTGAC 62.065 72.222 0.00 0.00 34.57 3.67
1197 1316 4.415332 CTCGTGGACCCCGTGACG 62.415 72.222 0.00 0.00 0.00 4.35
1228 1353 1.300233 GAGCAGCGGGATAGGTTCG 60.300 63.158 0.00 0.00 0.00 3.95
1518 1655 2.494918 CAGGGCTTCGTCTACGGG 59.505 66.667 2.24 0.00 40.29 5.28
2050 2187 4.742201 GGCTCGCCGTGCTCAAGA 62.742 66.667 11.18 0.00 0.00 3.02
2065 2202 1.751162 AAGACGGAGGAGGAGCTCG 60.751 63.158 7.83 0.00 0.00 5.03
2101 2238 4.838152 GCGCATGCCTTCCTCCGA 62.838 66.667 13.15 0.00 33.98 4.55
2199 2336 2.202851 CAGATGAAGGCGCGCTCT 60.203 61.111 32.29 22.20 0.00 4.09
2292 2432 2.160417 GCTGATGAAGGAAGAAACCACG 59.840 50.000 0.00 0.00 0.00 4.94
2373 2513 1.450312 GGACCTGATGCTGAACGGG 60.450 63.158 0.00 0.00 38.40 5.28
2470 2610 4.394712 GCAGCGCCCACCAGTACT 62.395 66.667 2.29 0.00 0.00 2.73
2539 2679 0.246910 GTCGTCCTTCTTCCCTGGTC 59.753 60.000 0.00 0.00 0.00 4.02
2695 2841 4.100084 CCACTCCCGGCATGCAGA 62.100 66.667 21.36 11.86 0.00 4.26
2737 2883 3.043713 CACGCTCGCTTTCTGGCA 61.044 61.111 0.00 0.00 0.00 4.92
2746 2892 0.317854 GCTTTCTGGCACGAACAACC 60.318 55.000 0.00 0.00 0.00 3.77
2748 2894 1.676006 CTTTCTGGCACGAACAACCTT 59.324 47.619 0.00 0.00 0.00 3.50
2781 2942 3.144120 GAGCGCGGCGTTCTTCATC 62.144 63.158 28.08 8.02 34.45 2.92
3088 3252 3.804518 TCACAAATCACACCGAAATCG 57.195 42.857 0.00 0.00 39.44 3.34
3091 3255 4.084066 TCACAAATCACACCGAAATCGAAG 60.084 41.667 4.04 0.00 43.02 3.79
3093 3257 4.274950 ACAAATCACACCGAAATCGAAGTT 59.725 37.500 4.04 0.00 43.02 2.66
3094 3258 4.663636 AATCACACCGAAATCGAAGTTC 57.336 40.909 4.04 0.00 43.02 3.01
3096 3260 3.724374 TCACACCGAAATCGAAGTTCTT 58.276 40.909 4.04 0.00 43.02 2.52
3097 3261 3.739300 TCACACCGAAATCGAAGTTCTTC 59.261 43.478 4.04 2.80 43.02 2.87
3106 3270 7.224024 CGAAATCGAAGTTCTTCTTTCTCTTC 58.776 38.462 17.13 0.00 43.02 2.87
3107 3271 7.428282 AAATCGAAGTTCTTCTTTCTCTTCC 57.572 36.000 10.24 0.00 36.40 3.46
3110 3274 5.302059 TCGAAGTTCTTCTTTCTCTTCCTCA 59.698 40.000 10.24 0.00 36.40 3.86
3117 3281 7.426929 TCTTCTTTCTCTTCCTCAAAATTCG 57.573 36.000 0.00 0.00 0.00 3.34
3119 3283 7.499232 TCTTCTTTCTCTTCCTCAAAATTCGTT 59.501 33.333 0.00 0.00 0.00 3.85
3141 3305 1.760613 GATCCCTACGTTCATCCACCA 59.239 52.381 0.00 0.00 0.00 4.17
3142 3306 1.191535 TCCCTACGTTCATCCACCAG 58.808 55.000 0.00 0.00 0.00 4.00
3143 3307 0.902531 CCCTACGTTCATCCACCAGT 59.097 55.000 0.00 0.00 0.00 4.00
3144 3308 1.278127 CCCTACGTTCATCCACCAGTT 59.722 52.381 0.00 0.00 0.00 3.16
3145 3309 2.618053 CCTACGTTCATCCACCAGTTC 58.382 52.381 0.00 0.00 0.00 3.01
3148 3312 3.140325 ACGTTCATCCACCAGTTCATT 57.860 42.857 0.00 0.00 0.00 2.57
3149 3313 4.280436 ACGTTCATCCACCAGTTCATTA 57.720 40.909 0.00 0.00 0.00 1.90
3150 3314 4.253685 ACGTTCATCCACCAGTTCATTAG 58.746 43.478 0.00 0.00 0.00 1.73
3151 3315 3.063997 CGTTCATCCACCAGTTCATTAGC 59.936 47.826 0.00 0.00 0.00 3.09
3152 3316 4.265073 GTTCATCCACCAGTTCATTAGCT 58.735 43.478 0.00 0.00 0.00 3.32
3154 3318 2.113860 TCCACCAGTTCATTAGCTGC 57.886 50.000 0.00 0.00 0.00 5.25
3155 3319 1.630369 TCCACCAGTTCATTAGCTGCT 59.370 47.619 7.57 7.57 0.00 4.24
3156 3320 2.012673 CCACCAGTTCATTAGCTGCTC 58.987 52.381 4.91 0.00 0.00 4.26
3160 3324 3.054875 ACCAGTTCATTAGCTGCTCATCA 60.055 43.478 4.91 0.00 0.00 3.07
3163 3327 5.761726 CCAGTTCATTAGCTGCTCATCATTA 59.238 40.000 4.91 0.00 0.00 1.90
3164 3328 6.261603 CCAGTTCATTAGCTGCTCATCATTAA 59.738 38.462 4.91 0.00 0.00 1.40
3165 3329 7.353497 CAGTTCATTAGCTGCTCATCATTAAG 58.647 38.462 4.91 0.00 0.00 1.85
3166 3330 7.012138 CAGTTCATTAGCTGCTCATCATTAAGT 59.988 37.037 4.91 0.00 0.00 2.24
3253 3419 4.465660 TGATCTAGAAGACTCAGCAAAGCT 59.534 41.667 0.00 0.00 40.77 3.74
3314 3480 1.608717 GCTCTCCCTTTCTGCTCCGA 61.609 60.000 0.00 0.00 0.00 4.55
3334 3500 0.240678 TGTTCATTGATGGTGTGCGC 59.759 50.000 0.00 0.00 0.00 6.09
3335 3501 0.794229 GTTCATTGATGGTGTGCGCG 60.794 55.000 0.00 0.00 0.00 6.86
3336 3502 1.233950 TTCATTGATGGTGTGCGCGT 61.234 50.000 8.43 0.00 0.00 6.01
3337 3503 1.209898 CATTGATGGTGTGCGCGTT 59.790 52.632 8.43 0.00 0.00 4.84
3338 3504 1.066656 CATTGATGGTGTGCGCGTTG 61.067 55.000 8.43 0.00 0.00 4.10
3364 3530 1.734477 GGCGATCCATCATCCGTCG 60.734 63.158 0.00 0.00 35.56 5.12
3365 3531 1.007271 GCGATCCATCATCCGTCGT 60.007 57.895 0.00 0.00 34.97 4.34
3378 3544 2.325166 GTCGTCTCGCTCGGCTAG 59.675 66.667 0.00 0.00 0.00 3.42
3388 3554 3.075005 TCGGCTAGCCCCTCACAC 61.075 66.667 28.09 0.36 0.00 3.82
3422 3588 1.943968 GCCATGACAGCGACTGGTTAA 60.944 52.381 10.80 0.00 35.51 2.01
3432 3598 1.443802 GACTGGTTAACTGAGGCAGC 58.556 55.000 5.42 0.00 34.37 5.25
3493 3660 2.202046 CGACACGCACATTGACGC 60.202 61.111 0.00 0.00 0.00 5.19
3516 3687 2.383527 GCTGACTTTGACGGGCTCG 61.384 63.158 3.27 3.27 43.02 5.03
3519 3690 2.049433 ACTTTGACGGGCTCGACG 60.049 61.111 15.95 0.22 40.11 5.12
3527 3698 4.856607 GGGCTCGACGCGGAAGAG 62.857 72.222 12.47 16.59 40.44 2.85
3531 3702 1.433879 CTCGACGCGGAAGAGGAAT 59.566 57.895 12.47 0.00 34.13 3.01
3532 3703 0.592754 CTCGACGCGGAAGAGGAATC 60.593 60.000 12.47 0.00 34.13 2.52
3539 3710 2.010497 GCGGAAGAGGAATCAAAGGAC 58.990 52.381 0.00 0.00 0.00 3.85
3541 3712 2.094182 CGGAAGAGGAATCAAAGGACGA 60.094 50.000 0.00 0.00 0.00 4.20
3545 3716 5.416013 GGAAGAGGAATCAAAGGACGATTTT 59.584 40.000 0.00 0.00 33.26 1.82
3548 3719 6.003950 AGAGGAATCAAAGGACGATTTTTGA 58.996 36.000 12.61 12.61 44.60 2.69
3550 3721 5.183904 AGGAATCAAAGGACGATTTTTGAGG 59.816 40.000 14.52 0.00 43.97 3.86
3552 3723 6.127619 GGAATCAAAGGACGATTTTTGAGGAT 60.128 38.462 14.52 7.11 43.97 3.24
3554 3725 6.254281 TCAAAGGACGATTTTTGAGGATTC 57.746 37.500 0.00 0.00 38.12 2.52
3556 3727 4.301072 AGGACGATTTTTGAGGATTCCA 57.699 40.909 5.29 0.00 0.00 3.53
3557 3728 4.265073 AGGACGATTTTTGAGGATTCCAG 58.735 43.478 5.29 0.00 0.00 3.86
3558 3729 4.010349 GGACGATTTTTGAGGATTCCAGT 58.990 43.478 5.29 0.00 0.00 4.00
3560 3731 4.651778 ACGATTTTTGAGGATTCCAGTGA 58.348 39.130 5.29 0.00 0.00 3.41
3561 3732 5.070001 ACGATTTTTGAGGATTCCAGTGAA 58.930 37.500 5.29 0.00 34.33 3.18
3562 3733 5.182001 ACGATTTTTGAGGATTCCAGTGAAG 59.818 40.000 5.29 0.00 33.05 3.02
3563 3734 5.412594 CGATTTTTGAGGATTCCAGTGAAGA 59.587 40.000 5.29 0.00 33.05 2.87
3564 3735 6.581171 ATTTTTGAGGATTCCAGTGAAGAC 57.419 37.500 5.29 0.00 33.05 3.01
3565 3736 3.319137 TTGAGGATTCCAGTGAAGACG 57.681 47.619 5.29 0.00 33.05 4.18
3566 3737 1.550524 TGAGGATTCCAGTGAAGACGG 59.449 52.381 5.29 0.00 33.05 4.79
3567 3738 1.550976 GAGGATTCCAGTGAAGACGGT 59.449 52.381 5.29 0.00 33.05 4.83
3568 3739 1.978580 AGGATTCCAGTGAAGACGGTT 59.021 47.619 5.29 0.00 33.05 4.44
3569 3740 2.028020 AGGATTCCAGTGAAGACGGTTC 60.028 50.000 5.29 0.00 33.05 3.62
3570 3741 2.289444 GGATTCCAGTGAAGACGGTTCA 60.289 50.000 0.00 0.00 33.05 3.18
3577 3761 4.573201 CCAGTGAAGACGGTTCAGTTTTTA 59.427 41.667 7.24 0.00 30.22 1.52
3589 3773 7.066525 ACGGTTCAGTTTTTACAGAAATCTGAA 59.933 33.333 16.93 15.57 46.59 3.02
3602 3801 7.199766 ACAGAAATCTGAAAATTTTACGCACA 58.800 30.769 16.93 0.00 46.59 4.57
3603 3802 7.379529 ACAGAAATCTGAAAATTTTACGCACAG 59.620 33.333 16.93 6.80 46.59 3.66
3605 3804 4.560136 TCTGAAAATTTTACGCACAGCA 57.440 36.364 2.75 0.00 0.00 4.41
3608 3807 6.673106 TCTGAAAATTTTACGCACAGCATAA 58.327 32.000 2.75 0.00 0.00 1.90
3610 3809 7.099666 TGAAAATTTTACGCACAGCATAAAC 57.900 32.000 2.75 0.00 26.08 2.01
3612 3811 4.671880 ATTTTACGCACAGCATAAACGA 57.328 36.364 0.00 0.00 26.08 3.85
3614 3813 3.443054 TTACGCACAGCATAAACGAAC 57.557 42.857 0.00 0.00 0.00 3.95
3617 3816 1.724654 CGCACAGCATAAACGAACACC 60.725 52.381 0.00 0.00 0.00 4.16
3618 3817 1.265635 GCACAGCATAAACGAACACCA 59.734 47.619 0.00 0.00 0.00 4.17
3621 3820 4.545610 CACAGCATAAACGAACACCAAAT 58.454 39.130 0.00 0.00 0.00 2.32
3622 3821 4.616802 CACAGCATAAACGAACACCAAATC 59.383 41.667 0.00 0.00 0.00 2.17
3623 3822 4.518970 ACAGCATAAACGAACACCAAATCT 59.481 37.500 0.00 0.00 0.00 2.40
3624 3823 4.853196 CAGCATAAACGAACACCAAATCTG 59.147 41.667 0.00 0.00 0.00 2.90
3625 3824 4.518970 AGCATAAACGAACACCAAATCTGT 59.481 37.500 0.00 0.00 0.00 3.41
3626 3825 5.703592 AGCATAAACGAACACCAAATCTGTA 59.296 36.000 0.00 0.00 0.00 2.74
3627 3826 6.021596 GCATAAACGAACACCAAATCTGTAG 58.978 40.000 0.00 0.00 0.00 2.74
3628 3827 6.128391 GCATAAACGAACACCAAATCTGTAGA 60.128 38.462 0.00 0.00 0.00 2.59
3629 3828 5.668558 AAACGAACACCAAATCTGTAGAC 57.331 39.130 0.00 0.00 0.00 2.59
3630 3829 4.330944 ACGAACACCAAATCTGTAGACA 57.669 40.909 0.00 0.00 0.00 3.41
3631 3830 4.699637 ACGAACACCAAATCTGTAGACAA 58.300 39.130 0.00 0.00 0.00 3.18
3632 3831 5.305585 ACGAACACCAAATCTGTAGACAAT 58.694 37.500 0.00 0.00 0.00 2.71
3633 3832 5.763204 ACGAACACCAAATCTGTAGACAATT 59.237 36.000 0.00 0.00 0.00 2.32
3634 3833 6.262273 ACGAACACCAAATCTGTAGACAATTT 59.738 34.615 0.00 0.00 0.00 1.82
3635 3834 7.138736 CGAACACCAAATCTGTAGACAATTTT 58.861 34.615 0.00 0.00 0.00 1.82
3638 3837 8.458573 ACACCAAATCTGTAGACAATTTTACA 57.541 30.769 0.00 0.00 0.00 2.41
3652 3851 7.386299 AGACAATTTTACAGACACTGTCAGATC 59.614 37.037 11.80 3.87 41.21 2.75
3660 3859 1.269958 CACTGTCAGATCCAGGGACA 58.730 55.000 6.91 6.85 35.26 4.02
3664 3863 1.482182 TGTCAGATCCAGGGACAATCG 59.518 52.381 5.07 0.00 38.50 3.34
3669 3868 2.431057 AGATCCAGGGACAATCGTGTAC 59.569 50.000 0.00 0.00 38.41 2.90
3701 3900 4.808364 GCCTCTGTAGACATTTGATGAGTC 59.192 45.833 0.00 0.00 0.00 3.36
3704 3903 5.641709 TCTGTAGACATTTGATGAGTCGTC 58.358 41.667 5.33 5.33 37.36 4.20
3715 3914 6.701145 TTGATGAGTCGTCTCTAAGCTAAT 57.299 37.500 13.45 0.00 40.98 1.73
3716 3915 6.066054 TGATGAGTCGTCTCTAAGCTAATG 57.934 41.667 13.45 0.00 40.98 1.90
3765 3970 3.432186 CCTGTCGGCTCCAAATCATTCTA 60.432 47.826 0.00 0.00 0.00 2.10
3802 4012 4.628333 TCCGACTCTTAAAATAAAGCACCG 59.372 41.667 0.00 0.00 0.00 4.94
3815 4025 1.450312 GCACCGCCTGATTAGCACT 60.450 57.895 0.00 0.00 0.00 4.40
3816 4026 1.432270 GCACCGCCTGATTAGCACTC 61.432 60.000 0.00 0.00 0.00 3.51
3833 4047 3.357079 CCTGTGCGTCCAGTTGGC 61.357 66.667 0.00 0.00 34.44 4.52
3846 4060 2.095567 CCAGTTGGCTTCTGATGAAACG 60.096 50.000 10.15 0.00 35.20 3.60
3851 4065 1.202222 GGCTTCTGATGAAACGCATGG 60.202 52.381 0.00 0.00 37.34 3.66
3862 4076 0.961019 AACGCATGGCATCAGTTGTT 59.039 45.000 14.07 5.27 0.00 2.83
3922 4139 1.879380 CACGCCTGTTTGAAGATTCCA 59.121 47.619 0.00 0.00 0.00 3.53
3929 4146 0.796312 TTTGAAGATTCCAGCGACGC 59.204 50.000 13.03 13.03 0.00 5.19
3945 4162 2.258013 CGCGCAAAAGGGAGGAACA 61.258 57.895 8.75 0.00 0.00 3.18
4012 4233 5.065731 CAGTTGGTCAAGATATTCTGCTTCC 59.934 44.000 0.00 0.00 0.00 3.46
4021 4242 1.888436 ATTCTGCTTCCGCTCGTCCA 61.888 55.000 0.00 0.00 36.97 4.02
4029 4250 4.477975 CGCTCGTCCACGGTCCTC 62.478 72.222 0.00 0.00 40.29 3.71
4030 4251 3.063084 GCTCGTCCACGGTCCTCT 61.063 66.667 0.00 0.00 40.29 3.69
4032 4253 1.507174 CTCGTCCACGGTCCTCTTC 59.493 63.158 0.00 0.00 40.29 2.87
4039 4260 0.246635 CACGGTCCTCTTCAATCGGT 59.753 55.000 0.00 0.00 0.00 4.69
4040 4261 0.531200 ACGGTCCTCTTCAATCGGTC 59.469 55.000 0.00 0.00 0.00 4.79
4041 4262 0.179108 CGGTCCTCTTCAATCGGTCC 60.179 60.000 0.00 0.00 0.00 4.46
4042 4263 1.196012 GGTCCTCTTCAATCGGTCCT 58.804 55.000 0.00 0.00 0.00 3.85
4043 4264 1.555533 GGTCCTCTTCAATCGGTCCTT 59.444 52.381 0.00 0.00 0.00 3.36
4044 4265 2.622436 GTCCTCTTCAATCGGTCCTTG 58.378 52.381 0.00 0.00 0.00 3.61
4045 4266 2.028020 GTCCTCTTCAATCGGTCCTTGT 60.028 50.000 0.00 0.00 0.00 3.16
4046 4267 2.637872 TCCTCTTCAATCGGTCCTTGTT 59.362 45.455 0.00 0.00 0.00 2.83
4047 4268 3.835978 TCCTCTTCAATCGGTCCTTGTTA 59.164 43.478 0.00 0.00 0.00 2.41
4048 4269 4.285003 TCCTCTTCAATCGGTCCTTGTTAA 59.715 41.667 0.00 0.00 0.00 2.01
4049 4270 5.045869 TCCTCTTCAATCGGTCCTTGTTAAT 60.046 40.000 0.00 0.00 0.00 1.40
4050 4271 5.294552 CCTCTTCAATCGGTCCTTGTTAATC 59.705 44.000 0.00 0.00 0.00 1.75
4051 4272 4.868171 TCTTCAATCGGTCCTTGTTAATCG 59.132 41.667 0.00 0.00 0.00 3.34
4052 4273 3.527533 TCAATCGGTCCTTGTTAATCGG 58.472 45.455 0.00 0.00 0.00 4.18
4053 4274 1.949465 ATCGGTCCTTGTTAATCGGC 58.051 50.000 0.00 0.00 0.00 5.54
4054 4275 0.899720 TCGGTCCTTGTTAATCGGCT 59.100 50.000 0.00 0.00 0.00 5.52
4055 4276 2.101783 TCGGTCCTTGTTAATCGGCTA 58.898 47.619 0.00 0.00 0.00 3.93
4056 4277 2.100252 TCGGTCCTTGTTAATCGGCTAG 59.900 50.000 0.00 0.00 0.00 3.42
4057 4278 2.210961 GGTCCTTGTTAATCGGCTAGC 58.789 52.381 6.04 6.04 0.00 3.42
4058 4279 1.859080 GTCCTTGTTAATCGGCTAGCG 59.141 52.381 9.00 4.38 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.766691 TTGTACCTCTCCGGCCGC 61.767 66.667 22.85 3.47 35.61 6.53
19 20 2.183555 GTTGTACCTCTCCGGCCG 59.816 66.667 21.04 21.04 35.61 6.13
20 21 1.218316 CTGTTGTACCTCTCCGGCC 59.782 63.158 0.00 0.00 35.61 6.13
21 22 1.448013 GCTGTTGTACCTCTCCGGC 60.448 63.158 0.00 0.00 35.61 6.13
22 23 1.153823 CGCTGTTGTACCTCTCCGG 60.154 63.158 0.00 0.00 39.35 5.14
23 24 0.456312 GTCGCTGTTGTACCTCTCCG 60.456 60.000 0.00 0.00 0.00 4.63
24 25 0.456312 CGTCGCTGTTGTACCTCTCC 60.456 60.000 0.00 0.00 0.00 3.71
25 26 0.520404 TCGTCGCTGTTGTACCTCTC 59.480 55.000 0.00 0.00 0.00 3.20
26 27 0.240411 GTCGTCGCTGTTGTACCTCT 59.760 55.000 0.00 0.00 0.00 3.69
27 28 0.039798 TGTCGTCGCTGTTGTACCTC 60.040 55.000 0.00 0.00 0.00 3.85
28 29 0.039437 CTGTCGTCGCTGTTGTACCT 60.039 55.000 0.00 0.00 0.00 3.08
29 30 0.039798 TCTGTCGTCGCTGTTGTACC 60.040 55.000 0.00 0.00 0.00 3.34
30 31 1.328439 CTCTGTCGTCGCTGTTGTAC 58.672 55.000 0.00 0.00 0.00 2.90
31 32 0.949397 ACTCTGTCGTCGCTGTTGTA 59.051 50.000 0.00 0.00 0.00 2.41
32 33 0.102481 AACTCTGTCGTCGCTGTTGT 59.898 50.000 0.00 0.00 0.00 3.32
33 34 0.504384 CAACTCTGTCGTCGCTGTTG 59.496 55.000 0.00 0.00 0.00 3.33
34 35 0.597637 CCAACTCTGTCGTCGCTGTT 60.598 55.000 0.00 0.00 0.00 3.16
35 36 1.007271 CCAACTCTGTCGTCGCTGT 60.007 57.895 0.00 0.00 0.00 4.40
36 37 0.730834 CTCCAACTCTGTCGTCGCTG 60.731 60.000 0.00 0.00 0.00 5.18
37 38 1.581954 CTCCAACTCTGTCGTCGCT 59.418 57.895 0.00 0.00 0.00 4.93
38 39 1.444553 CCTCCAACTCTGTCGTCGC 60.445 63.158 0.00 0.00 0.00 5.19
39 40 1.213013 CCCTCCAACTCTGTCGTCG 59.787 63.158 0.00 0.00 0.00 5.12
40 41 0.038159 CACCCTCCAACTCTGTCGTC 60.038 60.000 0.00 0.00 0.00 4.20
41 42 2.050269 CACCCTCCAACTCTGTCGT 58.950 57.895 0.00 0.00 0.00 4.34
42 43 1.374758 GCACCCTCCAACTCTGTCG 60.375 63.158 0.00 0.00 0.00 4.35
43 44 1.374758 CGCACCCTCCAACTCTGTC 60.375 63.158 0.00 0.00 0.00 3.51
44 45 2.743718 CGCACCCTCCAACTCTGT 59.256 61.111 0.00 0.00 0.00 3.41
45 46 1.903877 ATCCGCACCCTCCAACTCTG 61.904 60.000 0.00 0.00 0.00 3.35
46 47 1.613630 ATCCGCACCCTCCAACTCT 60.614 57.895 0.00 0.00 0.00 3.24
47 48 1.450312 CATCCGCACCCTCCAACTC 60.450 63.158 0.00 0.00 0.00 3.01
48 49 2.671070 CATCCGCACCCTCCAACT 59.329 61.111 0.00 0.00 0.00 3.16
49 50 3.134127 GCATCCGCACCCTCCAAC 61.134 66.667 0.00 0.00 38.36 3.77
50 51 3.645660 TGCATCCGCACCCTCCAA 61.646 61.111 0.00 0.00 45.36 3.53
59 60 1.017387 CCCTCTTACTTTGCATCCGC 58.983 55.000 0.00 0.00 39.24 5.54
60 61 2.168521 TCTCCCTCTTACTTTGCATCCG 59.831 50.000 0.00 0.00 0.00 4.18
61 62 3.914426 TCTCCCTCTTACTTTGCATCC 57.086 47.619 0.00 0.00 0.00 3.51
62 63 4.633565 CACTTCTCCCTCTTACTTTGCATC 59.366 45.833 0.00 0.00 0.00 3.91
63 64 4.566488 CCACTTCTCCCTCTTACTTTGCAT 60.566 45.833 0.00 0.00 0.00 3.96
64 65 3.244561 CCACTTCTCCCTCTTACTTTGCA 60.245 47.826 0.00 0.00 0.00 4.08
65 66 3.339141 CCACTTCTCCCTCTTACTTTGC 58.661 50.000 0.00 0.00 0.00 3.68
66 67 3.339141 GCCACTTCTCCCTCTTACTTTG 58.661 50.000 0.00 0.00 0.00 2.77
67 68 2.028020 CGCCACTTCTCCCTCTTACTTT 60.028 50.000 0.00 0.00 0.00 2.66
68 69 1.550976 CGCCACTTCTCCCTCTTACTT 59.449 52.381 0.00 0.00 0.00 2.24
69 70 1.187087 CGCCACTTCTCCCTCTTACT 58.813 55.000 0.00 0.00 0.00 2.24
70 71 0.175989 CCGCCACTTCTCCCTCTTAC 59.824 60.000 0.00 0.00 0.00 2.34
71 72 0.040646 TCCGCCACTTCTCCCTCTTA 59.959 55.000 0.00 0.00 0.00 2.10
72 73 1.229209 TCCGCCACTTCTCCCTCTT 60.229 57.895 0.00 0.00 0.00 2.85
73 74 1.684049 CTCCGCCACTTCTCCCTCT 60.684 63.158 0.00 0.00 0.00 3.69
74 75 1.985116 ACTCCGCCACTTCTCCCTC 60.985 63.158 0.00 0.00 0.00 4.30
75 76 2.120718 ACTCCGCCACTTCTCCCT 59.879 61.111 0.00 0.00 0.00 4.20
76 77 1.827399 TTCACTCCGCCACTTCTCCC 61.827 60.000 0.00 0.00 0.00 4.30
77 78 0.034896 TTTCACTCCGCCACTTCTCC 59.965 55.000 0.00 0.00 0.00 3.71
78 79 1.000955 TCTTTCACTCCGCCACTTCTC 59.999 52.381 0.00 0.00 0.00 2.87
79 80 1.048601 TCTTTCACTCCGCCACTTCT 58.951 50.000 0.00 0.00 0.00 2.85
80 81 1.878953 TTCTTTCACTCCGCCACTTC 58.121 50.000 0.00 0.00 0.00 3.01
81 82 2.341846 TTTCTTTCACTCCGCCACTT 57.658 45.000 0.00 0.00 0.00 3.16
82 83 2.341846 TTTTCTTTCACTCCGCCACT 57.658 45.000 0.00 0.00 0.00 4.00
83 84 2.552315 TCATTTTCTTTCACTCCGCCAC 59.448 45.455 0.00 0.00 0.00 5.01
84 85 2.813754 CTCATTTTCTTTCACTCCGCCA 59.186 45.455 0.00 0.00 0.00 5.69
85 86 2.162408 CCTCATTTTCTTTCACTCCGCC 59.838 50.000 0.00 0.00 0.00 6.13
86 87 2.414691 GCCTCATTTTCTTTCACTCCGC 60.415 50.000 0.00 0.00 0.00 5.54
87 88 2.162408 GGCCTCATTTTCTTTCACTCCG 59.838 50.000 0.00 0.00 0.00 4.63
88 89 2.162408 CGGCCTCATTTTCTTTCACTCC 59.838 50.000 0.00 0.00 0.00 3.85
89 90 3.074412 TCGGCCTCATTTTCTTTCACTC 58.926 45.455 0.00 0.00 0.00 3.51
90 91 3.140325 TCGGCCTCATTTTCTTTCACT 57.860 42.857 0.00 0.00 0.00 3.41
91 92 3.915437 TTCGGCCTCATTTTCTTTCAC 57.085 42.857 0.00 0.00 0.00 3.18
92 93 3.255642 CCTTTCGGCCTCATTTTCTTTCA 59.744 43.478 0.00 0.00 0.00 2.69
93 94 3.367395 CCCTTTCGGCCTCATTTTCTTTC 60.367 47.826 0.00 0.00 0.00 2.62
94 95 2.562738 CCCTTTCGGCCTCATTTTCTTT 59.437 45.455 0.00 0.00 0.00 2.52
95 96 2.171003 CCCTTTCGGCCTCATTTTCTT 58.829 47.619 0.00 0.00 0.00 2.52
96 97 1.075536 ACCCTTTCGGCCTCATTTTCT 59.924 47.619 0.00 0.00 33.26 2.52
97 98 1.202348 CACCCTTTCGGCCTCATTTTC 59.798 52.381 0.00 0.00 33.26 2.29
98 99 1.256812 CACCCTTTCGGCCTCATTTT 58.743 50.000 0.00 0.00 33.26 1.82
99 100 0.611896 CCACCCTTTCGGCCTCATTT 60.612 55.000 0.00 0.00 33.26 2.32
100 101 1.000896 CCACCCTTTCGGCCTCATT 60.001 57.895 0.00 0.00 33.26 2.57
101 102 1.281925 ATCCACCCTTTCGGCCTCAT 61.282 55.000 0.00 0.00 33.26 2.90
102 103 1.497309 AATCCACCCTTTCGGCCTCA 61.497 55.000 0.00 0.00 33.26 3.86
103 104 0.323451 AAATCCACCCTTTCGGCCTC 60.323 55.000 0.00 0.00 33.26 4.70
104 105 0.996583 TAAATCCACCCTTTCGGCCT 59.003 50.000 0.00 0.00 33.26 5.19
105 106 1.340697 ACTAAATCCACCCTTTCGGCC 60.341 52.381 0.00 0.00 33.26 6.13
106 107 1.743394 CACTAAATCCACCCTTTCGGC 59.257 52.381 0.00 0.00 33.26 5.54
107 108 2.365582 CCACTAAATCCACCCTTTCGG 58.634 52.381 0.00 0.00 37.81 4.30
108 109 2.365582 CCCACTAAATCCACCCTTTCG 58.634 52.381 0.00 0.00 0.00 3.46
109 110 2.100197 GCCCACTAAATCCACCCTTTC 58.900 52.381 0.00 0.00 0.00 2.62
110 111 1.273041 GGCCCACTAAATCCACCCTTT 60.273 52.381 0.00 0.00 0.00 3.11
111 112 0.335019 GGCCCACTAAATCCACCCTT 59.665 55.000 0.00 0.00 0.00 3.95
112 113 0.552615 AGGCCCACTAAATCCACCCT 60.553 55.000 0.00 0.00 0.00 4.34
113 114 0.395724 CAGGCCCACTAAATCCACCC 60.396 60.000 0.00 0.00 0.00 4.61
114 115 0.395724 CCAGGCCCACTAAATCCACC 60.396 60.000 0.00 0.00 0.00 4.61
115 116 0.395724 CCCAGGCCCACTAAATCCAC 60.396 60.000 0.00 0.00 0.00 4.02
116 117 1.580066 CCCCAGGCCCACTAAATCCA 61.580 60.000 0.00 0.00 0.00 3.41
117 118 1.230212 CCCCAGGCCCACTAAATCC 59.770 63.158 0.00 0.00 0.00 3.01
118 119 0.395724 CACCCCAGGCCCACTAAATC 60.396 60.000 0.00 0.00 0.00 2.17
119 120 1.146544 ACACCCCAGGCCCACTAAAT 61.147 55.000 0.00 0.00 0.00 1.40
120 121 1.365105 AACACCCCAGGCCCACTAAA 61.365 55.000 0.00 0.00 0.00 1.85
121 122 1.776710 AACACCCCAGGCCCACTAA 60.777 57.895 0.00 0.00 0.00 2.24
122 123 2.121689 AACACCCCAGGCCCACTA 60.122 61.111 0.00 0.00 0.00 2.74
123 124 3.902112 CAACACCCCAGGCCCACT 61.902 66.667 0.00 0.00 0.00 4.00
124 125 4.994756 CCAACACCCCAGGCCCAC 62.995 72.222 0.00 0.00 0.00 4.61
126 127 3.238197 ATTCCAACACCCCAGGCCC 62.238 63.158 0.00 0.00 0.00 5.80
127 128 1.682344 GATTCCAACACCCCAGGCC 60.682 63.158 0.00 0.00 0.00 5.19
128 129 1.682344 GGATTCCAACACCCCAGGC 60.682 63.158 0.00 0.00 0.00 4.85
129 130 0.114168 TTGGATTCCAACACCCCAGG 59.886 55.000 14.24 0.00 38.75 4.45
130 131 3.763931 TTGGATTCCAACACCCCAG 57.236 52.632 14.24 0.00 38.75 4.45
138 139 1.349688 AGTAGCCACGTTGGATTCCAA 59.650 47.619 14.24 14.24 40.96 3.53
139 140 0.981183 AGTAGCCACGTTGGATTCCA 59.019 50.000 0.00 0.00 40.96 3.53
140 141 1.338769 ACAGTAGCCACGTTGGATTCC 60.339 52.381 8.04 0.00 40.96 3.01
141 142 2.000447 GACAGTAGCCACGTTGGATTC 59.000 52.381 8.04 0.45 40.96 2.52
142 143 1.623811 AGACAGTAGCCACGTTGGATT 59.376 47.619 8.04 0.00 40.96 3.01
143 144 1.267121 AGACAGTAGCCACGTTGGAT 58.733 50.000 8.04 4.39 40.96 3.41
144 145 1.816835 CTAGACAGTAGCCACGTTGGA 59.183 52.381 8.04 0.00 40.96 3.53
145 146 1.816835 TCTAGACAGTAGCCACGTTGG 59.183 52.381 0.00 0.00 41.55 3.77
146 147 2.488545 AGTCTAGACAGTAGCCACGTTG 59.511 50.000 24.44 0.00 0.00 4.10
147 148 2.748532 GAGTCTAGACAGTAGCCACGTT 59.251 50.000 24.44 0.00 0.00 3.99
148 149 2.358015 GAGTCTAGACAGTAGCCACGT 58.642 52.381 24.44 0.00 0.00 4.49
149 150 1.671845 GGAGTCTAGACAGTAGCCACG 59.328 57.143 24.44 0.00 0.00 4.94
150 151 2.025898 GGGAGTCTAGACAGTAGCCAC 58.974 57.143 24.44 4.13 0.00 5.01
151 152 1.408405 CGGGAGTCTAGACAGTAGCCA 60.408 57.143 24.44 0.00 0.00 4.75
152 153 1.310904 CGGGAGTCTAGACAGTAGCC 58.689 60.000 24.44 15.59 0.00 3.93
153 154 0.664224 GCGGGAGTCTAGACAGTAGC 59.336 60.000 24.44 18.74 0.00 3.58
154 155 2.039818 TGCGGGAGTCTAGACAGTAG 57.960 55.000 24.44 13.52 0.00 2.57
155 156 2.089980 GTTGCGGGAGTCTAGACAGTA 58.910 52.381 24.44 9.52 0.00 2.74
156 157 0.889306 GTTGCGGGAGTCTAGACAGT 59.111 55.000 24.44 4.90 0.00 3.55
157 158 0.173708 GGTTGCGGGAGTCTAGACAG 59.826 60.000 24.44 13.19 0.00 3.51
158 159 1.255667 GGGTTGCGGGAGTCTAGACA 61.256 60.000 24.44 0.00 0.00 3.41
159 160 1.516423 GGGTTGCGGGAGTCTAGAC 59.484 63.158 15.41 15.41 0.00 2.59
160 161 1.684734 GGGGTTGCGGGAGTCTAGA 60.685 63.158 0.00 0.00 0.00 2.43
161 162 2.732619 GGGGGTTGCGGGAGTCTAG 61.733 68.421 0.00 0.00 0.00 2.43
162 163 2.686106 GGGGGTTGCGGGAGTCTA 60.686 66.667 0.00 0.00 0.00 2.59
180 181 3.721087 ACACAAAGTGAAGATAGGGGG 57.279 47.619 3.88 0.00 36.96 5.40
192 193 4.496341 CGAATGCACTTTCTCACACAAAGT 60.496 41.667 0.00 0.00 43.46 2.66
193 194 3.970610 CGAATGCACTTTCTCACACAAAG 59.029 43.478 0.00 0.00 36.97 2.77
194 195 3.625313 TCGAATGCACTTTCTCACACAAA 59.375 39.130 0.00 0.00 0.00 2.83
195 196 3.202097 TCGAATGCACTTTCTCACACAA 58.798 40.909 0.00 0.00 0.00 3.33
196 197 2.832563 TCGAATGCACTTTCTCACACA 58.167 42.857 0.00 0.00 0.00 3.72
197 198 3.002246 TGTTCGAATGCACTTTCTCACAC 59.998 43.478 0.00 0.00 0.00 3.82
198 199 3.202097 TGTTCGAATGCACTTTCTCACA 58.798 40.909 0.00 0.00 0.00 3.58
199 200 3.803555 CTGTTCGAATGCACTTTCTCAC 58.196 45.455 0.00 0.00 0.00 3.51
200 201 2.224079 GCTGTTCGAATGCACTTTCTCA 59.776 45.455 17.37 0.50 0.00 3.27
201 202 2.413371 GGCTGTTCGAATGCACTTTCTC 60.413 50.000 21.65 5.07 0.00 2.87
202 203 1.537202 GGCTGTTCGAATGCACTTTCT 59.463 47.619 21.65 0.00 0.00 2.52
203 204 1.725931 CGGCTGTTCGAATGCACTTTC 60.726 52.381 21.65 8.16 0.00 2.62
204 205 0.238289 CGGCTGTTCGAATGCACTTT 59.762 50.000 21.65 0.00 0.00 2.66
205 206 0.602638 TCGGCTGTTCGAATGCACTT 60.603 50.000 21.65 0.00 36.12 3.16
206 207 1.005037 TCGGCTGTTCGAATGCACT 60.005 52.632 21.65 0.00 36.12 4.40
207 208 1.421485 CTCGGCTGTTCGAATGCAC 59.579 57.895 21.65 13.07 38.77 4.57
208 209 2.390599 GCTCGGCTGTTCGAATGCA 61.391 57.895 21.65 8.06 38.77 3.96
209 210 2.103042 AGCTCGGCTGTTCGAATGC 61.103 57.895 14.96 14.96 37.57 3.56
210 211 4.192000 AGCTCGGCTGTTCGAATG 57.808 55.556 0.00 0.00 37.57 2.67
219 220 1.320344 TTGTATCGGTCAGCTCGGCT 61.320 55.000 0.00 0.00 40.77 5.52
220 221 0.872021 CTTGTATCGGTCAGCTCGGC 60.872 60.000 0.00 0.00 0.00 5.54
221 222 0.872021 GCTTGTATCGGTCAGCTCGG 60.872 60.000 0.00 0.00 0.00 4.63
222 223 0.872021 GGCTTGTATCGGTCAGCTCG 60.872 60.000 0.00 0.00 0.00 5.03
223 224 0.872021 CGGCTTGTATCGGTCAGCTC 60.872 60.000 0.00 0.00 0.00 4.09
224 225 1.141881 CGGCTTGTATCGGTCAGCT 59.858 57.895 0.00 0.00 0.00 4.24
225 226 1.883084 CCGGCTTGTATCGGTCAGC 60.883 63.158 0.00 0.00 41.23 4.26
226 227 4.420143 CCGGCTTGTATCGGTCAG 57.580 61.111 0.00 0.00 41.23 3.51
231 232 0.390603 TCCAACACCGGCTTGTATCG 60.391 55.000 0.00 0.00 0.00 2.92
232 233 1.670811 CATCCAACACCGGCTTGTATC 59.329 52.381 0.00 0.00 0.00 2.24
233 234 1.280710 TCATCCAACACCGGCTTGTAT 59.719 47.619 0.00 0.00 0.00 2.29
234 235 0.687920 TCATCCAACACCGGCTTGTA 59.312 50.000 0.00 0.00 0.00 2.41
235 236 0.889186 GTCATCCAACACCGGCTTGT 60.889 55.000 0.00 0.00 0.00 3.16
236 237 0.606401 AGTCATCCAACACCGGCTTG 60.606 55.000 0.00 2.97 0.00 4.01
237 238 0.110486 AAGTCATCCAACACCGGCTT 59.890 50.000 0.00 0.00 0.00 4.35
238 239 0.110486 AAAGTCATCCAACACCGGCT 59.890 50.000 0.00 0.00 0.00 5.52
239 240 0.958822 AAAAGTCATCCAACACCGGC 59.041 50.000 0.00 0.00 0.00 6.13
240 241 1.953686 ACAAAAGTCATCCAACACCGG 59.046 47.619 0.00 0.00 0.00 5.28
241 242 2.287547 CCACAAAAGTCATCCAACACCG 60.288 50.000 0.00 0.00 0.00 4.94
242 243 2.693074 ACCACAAAAGTCATCCAACACC 59.307 45.455 0.00 0.00 0.00 4.16
243 244 3.243401 GGACCACAAAAGTCATCCAACAC 60.243 47.826 0.00 0.00 35.89 3.32
244 245 2.955660 GGACCACAAAAGTCATCCAACA 59.044 45.455 0.00 0.00 35.89 3.33
245 246 2.031157 CGGACCACAAAAGTCATCCAAC 60.031 50.000 0.00 0.00 35.89 3.77
246 247 2.226330 CGGACCACAAAAGTCATCCAA 58.774 47.619 0.00 0.00 35.89 3.53
247 248 1.544537 CCGGACCACAAAAGTCATCCA 60.545 52.381 0.00 0.00 35.89 3.41
248 249 1.165270 CCGGACCACAAAAGTCATCC 58.835 55.000 0.00 0.00 35.89 3.51
249 250 2.178912 TCCGGACCACAAAAGTCATC 57.821 50.000 0.00 0.00 35.89 2.92
250 251 2.224769 ACATCCGGACCACAAAAGTCAT 60.225 45.455 6.12 0.00 35.89 3.06
251 252 1.142060 ACATCCGGACCACAAAAGTCA 59.858 47.619 6.12 0.00 35.89 3.41
252 253 1.892209 ACATCCGGACCACAAAAGTC 58.108 50.000 6.12 0.00 0.00 3.01
253 254 2.358322 AACATCCGGACCACAAAAGT 57.642 45.000 6.12 0.00 0.00 2.66
254 255 2.862140 GCAAACATCCGGACCACAAAAG 60.862 50.000 6.12 0.00 0.00 2.27
255 256 1.067821 GCAAACATCCGGACCACAAAA 59.932 47.619 6.12 0.00 0.00 2.44
256 257 0.671251 GCAAACATCCGGACCACAAA 59.329 50.000 6.12 0.00 0.00 2.83
257 258 0.466372 TGCAAACATCCGGACCACAA 60.466 50.000 6.12 0.00 0.00 3.33
258 259 0.888736 CTGCAAACATCCGGACCACA 60.889 55.000 6.12 0.00 0.00 4.17
259 260 1.586154 CCTGCAAACATCCGGACCAC 61.586 60.000 6.12 0.00 0.00 4.16
260 261 1.303236 CCTGCAAACATCCGGACCA 60.303 57.895 6.12 0.00 0.00 4.02
261 262 0.394352 ATCCTGCAAACATCCGGACC 60.394 55.000 6.12 0.00 0.00 4.46
262 263 2.325583 TATCCTGCAAACATCCGGAC 57.674 50.000 6.12 0.00 0.00 4.79
263 264 3.576078 AATATCCTGCAAACATCCGGA 57.424 42.857 6.61 6.61 0.00 5.14
264 265 3.631686 TCAAATATCCTGCAAACATCCGG 59.368 43.478 0.00 0.00 0.00 5.14
265 266 4.898829 TCAAATATCCTGCAAACATCCG 57.101 40.909 0.00 0.00 0.00 4.18
266 267 8.632679 TCTTAATCAAATATCCTGCAAACATCC 58.367 33.333 0.00 0.00 0.00 3.51
268 269 9.807649 GTTCTTAATCAAATATCCTGCAAACAT 57.192 29.630 0.00 0.00 0.00 2.71
269 270 9.023962 AGTTCTTAATCAAATATCCTGCAAACA 57.976 29.630 0.00 0.00 0.00 2.83
270 271 9.860898 AAGTTCTTAATCAAATATCCTGCAAAC 57.139 29.630 0.00 0.00 0.00 2.93
273 274 9.466497 AGAAAGTTCTTAATCAAATATCCTGCA 57.534 29.630 0.00 0.00 32.55 4.41
290 291 9.628500 AGAAAGTTATAACACCAAGAAAGTTCT 57.372 29.630 17.65 7.14 39.74 3.01
293 294 8.630037 CCAAGAAAGTTATAACACCAAGAAAGT 58.370 33.333 17.65 0.00 0.00 2.66
294 295 8.630037 ACCAAGAAAGTTATAACACCAAGAAAG 58.370 33.333 17.65 1.82 0.00 2.62
295 296 8.410141 CACCAAGAAAGTTATAACACCAAGAAA 58.590 33.333 17.65 0.00 0.00 2.52
296 297 7.558444 ACACCAAGAAAGTTATAACACCAAGAA 59.442 33.333 17.65 0.00 0.00 2.52
297 298 7.057894 ACACCAAGAAAGTTATAACACCAAGA 58.942 34.615 17.65 0.00 0.00 3.02
298 299 7.272037 ACACCAAGAAAGTTATAACACCAAG 57.728 36.000 17.65 3.27 0.00 3.61
299 300 7.648039 AACACCAAGAAAGTTATAACACCAA 57.352 32.000 17.65 0.00 0.00 3.67
300 301 8.788806 CATAACACCAAGAAAGTTATAACACCA 58.211 33.333 17.65 0.00 36.58 4.17
301 302 8.241367 CCATAACACCAAGAAAGTTATAACACC 58.759 37.037 17.65 6.16 36.58 4.16
302 303 8.789762 ACCATAACACCAAGAAAGTTATAACAC 58.210 33.333 17.65 8.50 36.58 3.32
303 304 8.927675 ACCATAACACCAAGAAAGTTATAACA 57.072 30.769 17.65 0.00 36.58 2.41
304 305 9.620660 CAACCATAACACCAAGAAAGTTATAAC 57.379 33.333 7.57 7.57 36.58 1.89
305 306 8.301002 GCAACCATAACACCAAGAAAGTTATAA 58.699 33.333 0.00 0.00 36.58 0.98
306 307 7.448777 TGCAACCATAACACCAAGAAAGTTATA 59.551 33.333 0.00 0.00 36.58 0.98
307 308 6.266558 TGCAACCATAACACCAAGAAAGTTAT 59.733 34.615 0.00 0.00 38.57 1.89
308 309 5.594725 TGCAACCATAACACCAAGAAAGTTA 59.405 36.000 0.00 0.00 32.87 2.24
318 319 3.305335 CCTTGAAGTGCAACCATAACACC 60.305 47.826 0.00 0.00 37.80 4.16
336 337 3.124921 CGTTGCGGCCTACCCTTG 61.125 66.667 0.00 0.00 0.00 3.61
340 341 0.390209 TAAACTCGTTGCGGCCTACC 60.390 55.000 0.00 0.00 0.00 3.18
384 385 1.588674 CTCAAGGGCGTGTAACAACA 58.411 50.000 0.00 0.00 35.74 3.33
389 390 1.606668 CTTTTGCTCAAGGGCGTGTAA 59.393 47.619 0.00 0.00 34.52 2.41
421 422 3.612247 ATGGCGTGAGTGTGCTCCC 62.612 63.158 0.00 0.00 40.95 4.30
487 500 1.689233 CCGTCTCCCCCATCTCCAA 60.689 63.158 0.00 0.00 0.00 3.53
750 825 2.759355 ACGGGATCTTGGTTGGATAGA 58.241 47.619 0.00 0.00 0.00 1.98
752 827 3.616219 CAAACGGGATCTTGGTTGGATA 58.384 45.455 7.39 0.00 0.00 2.59
770 858 0.030101 CGGCCGAAAAGTGAAGCAAA 59.970 50.000 24.07 0.00 0.00 3.68
788 876 0.524816 CCCGTGACTACAATCGACCG 60.525 60.000 0.00 0.00 0.00 4.79
863 958 1.174783 CAGCAGAGCAGCCAAGAAAT 58.825 50.000 0.00 0.00 34.23 2.17
895 1007 3.196685 GGACTCTAGAGTGGCAAGAACAT 59.803 47.826 29.84 0.02 42.66 2.71
903 1015 2.952116 AGTATGGGACTCTAGAGTGGC 58.048 52.381 29.84 15.85 42.66 5.01
918 1030 7.065894 CGAAGAAAGAAACAACAGTGAGTATG 58.934 38.462 0.00 0.00 0.00 2.39
919 1031 6.761714 ACGAAGAAAGAAACAACAGTGAGTAT 59.238 34.615 0.00 0.00 0.00 2.12
920 1032 6.103997 ACGAAGAAAGAAACAACAGTGAGTA 58.896 36.000 0.00 0.00 0.00 2.59
921 1033 4.935808 ACGAAGAAAGAAACAACAGTGAGT 59.064 37.500 0.00 0.00 0.00 3.41
928 1040 4.254745 ACACGACGAAGAAAGAAACAAC 57.745 40.909 0.00 0.00 0.00 3.32
934 1046 2.218953 AGCAACACGACGAAGAAAGA 57.781 45.000 0.00 0.00 0.00 2.52
991 1103 1.984570 CCCTCACTCCTCGGCAAGA 60.985 63.158 0.00 0.00 0.00 3.02
997 1109 2.443016 CCCCTCCCTCACTCCTCG 60.443 72.222 0.00 0.00 0.00 4.63
1143 1262 2.694760 GCAGCCGGCTCCAAAGAAG 61.695 63.158 30.29 14.45 40.25 2.85
1228 1353 3.894947 GCTCTCCTCCTCGTCGGC 61.895 72.222 0.00 0.00 0.00 5.54
2065 2202 3.455469 GGGATGCAGCTTGTGGCC 61.455 66.667 0.22 0.00 43.05 5.36
2209 2346 0.457337 ATGGTAAGGTCGACGAACGC 60.457 55.000 9.92 2.01 42.26 4.84
2292 2432 3.998672 TGGGTGAAGTCGGCGTCC 61.999 66.667 6.85 0.00 0.00 4.79
2358 2498 1.361668 CGTTCCCGTTCAGCATCAGG 61.362 60.000 0.00 0.00 0.00 3.86
2470 2610 0.109723 GGGTTGTTGTACCTGCAGGA 59.890 55.000 39.19 19.62 38.30 3.86
2677 2823 4.415150 CTGCATGCCGGGAGTGGT 62.415 66.667 16.68 0.00 0.00 4.16
2680 2826 2.507944 GATCTGCATGCCGGGAGT 59.492 61.111 16.68 1.89 0.00 3.85
2737 2883 1.806542 CTGCTGCATAAGGTTGTTCGT 59.193 47.619 1.31 0.00 0.00 3.85
2838 2999 2.811317 GCCGCTGACAGGTCGAAG 60.811 66.667 4.26 0.00 0.00 3.79
2885 3046 4.724697 CAACGTGCTTCTGCGGCG 62.725 66.667 0.51 0.51 43.34 6.46
3088 3252 7.793927 TTTGAGGAAGAGAAAGAAGAACTTC 57.206 36.000 6.46 6.46 37.93 3.01
3091 3255 7.800847 CGAATTTTGAGGAAGAGAAAGAAGAAC 59.199 37.037 0.00 0.00 0.00 3.01
3093 3257 6.992715 ACGAATTTTGAGGAAGAGAAAGAAGA 59.007 34.615 0.00 0.00 0.00 2.87
3094 3258 7.195839 ACGAATTTTGAGGAAGAGAAAGAAG 57.804 36.000 0.00 0.00 0.00 2.85
3096 3260 6.017109 CCAACGAATTTTGAGGAAGAGAAAGA 60.017 38.462 0.00 0.00 0.00 2.52
3097 3261 6.017109 TCCAACGAATTTTGAGGAAGAGAAAG 60.017 38.462 0.00 0.00 0.00 2.62
3106 3270 3.356290 AGGGATCCAACGAATTTTGAGG 58.644 45.455 15.23 0.00 0.00 3.86
3107 3271 4.034048 CGTAGGGATCCAACGAATTTTGAG 59.966 45.833 26.40 1.70 38.89 3.02
3110 3274 3.946606 ACGTAGGGATCCAACGAATTTT 58.053 40.909 33.14 15.94 39.80 1.82
3117 3281 2.169769 TGGATGAACGTAGGGATCCAAC 59.830 50.000 15.23 10.18 41.13 3.77
3119 3283 1.760613 GTGGATGAACGTAGGGATCCA 59.239 52.381 15.23 11.66 41.69 3.41
3141 3305 7.052873 ACTTAATGATGAGCAGCTAATGAACT 58.947 34.615 0.00 0.00 0.00 3.01
3142 3306 7.256756 ACTTAATGATGAGCAGCTAATGAAC 57.743 36.000 0.00 0.00 0.00 3.18
3143 3307 7.012704 GGAACTTAATGATGAGCAGCTAATGAA 59.987 37.037 0.00 0.00 0.00 2.57
3144 3308 6.484643 GGAACTTAATGATGAGCAGCTAATGA 59.515 38.462 0.00 0.00 0.00 2.57
3145 3309 6.261603 TGGAACTTAATGATGAGCAGCTAATG 59.738 38.462 0.00 0.00 0.00 1.90
3148 3312 5.357742 TGGAACTTAATGATGAGCAGCTA 57.642 39.130 0.00 0.00 0.00 3.32
3149 3313 4.226427 TGGAACTTAATGATGAGCAGCT 57.774 40.909 0.00 0.00 0.00 4.24
3150 3314 4.970662 TTGGAACTTAATGATGAGCAGC 57.029 40.909 0.00 0.00 0.00 5.25
3151 3315 5.183713 TGGTTTGGAACTTAATGATGAGCAG 59.816 40.000 0.00 0.00 0.00 4.24
3152 3316 5.076182 TGGTTTGGAACTTAATGATGAGCA 58.924 37.500 0.00 0.00 0.00 4.26
3154 3318 7.925483 TGTTTTGGTTTGGAACTTAATGATGAG 59.075 33.333 0.00 0.00 0.00 2.90
3155 3319 7.708752 GTGTTTTGGTTTGGAACTTAATGATGA 59.291 33.333 0.00 0.00 0.00 2.92
3156 3320 7.042119 GGTGTTTTGGTTTGGAACTTAATGATG 60.042 37.037 0.00 0.00 0.00 3.07
3160 3324 5.127356 TCGGTGTTTTGGTTTGGAACTTAAT 59.873 36.000 0.00 0.00 0.00 1.40
3163 3327 2.826725 TCGGTGTTTTGGTTTGGAACTT 59.173 40.909 0.00 0.00 0.00 2.66
3164 3328 2.164827 GTCGGTGTTTTGGTTTGGAACT 59.835 45.455 0.00 0.00 0.00 3.01
3165 3329 2.532235 GTCGGTGTTTTGGTTTGGAAC 58.468 47.619 0.00 0.00 0.00 3.62
3166 3330 1.132643 CGTCGGTGTTTTGGTTTGGAA 59.867 47.619 0.00 0.00 0.00 3.53
3283 3449 1.597461 GGAGAGCGGGTGTAAAGCT 59.403 57.895 0.00 0.00 44.80 3.74
3284 3450 1.449778 GGGAGAGCGGGTGTAAAGC 60.450 63.158 0.00 0.00 0.00 3.51
3285 3451 0.613777 AAGGGAGAGCGGGTGTAAAG 59.386 55.000 0.00 0.00 0.00 1.85
3286 3452 1.002773 GAAAGGGAGAGCGGGTGTAAA 59.997 52.381 0.00 0.00 0.00 2.01
3314 3480 1.135315 GCGCACACCATCAATGAACAT 60.135 47.619 0.30 0.00 0.00 2.71
3334 3500 3.645157 GATCGCCACCAACGCAACG 62.645 63.158 0.00 0.00 0.00 4.10
3335 3501 2.175811 GATCGCCACCAACGCAAC 59.824 61.111 0.00 0.00 0.00 4.17
3336 3502 3.053291 GGATCGCCACCAACGCAA 61.053 61.111 0.00 0.00 0.00 4.85
3337 3503 4.321966 TGGATCGCCACCAACGCA 62.322 61.111 0.00 0.00 39.92 5.24
3376 3542 3.449227 CGAGCGTGTGAGGGGCTA 61.449 66.667 0.00 0.00 37.10 3.93
3493 3660 2.671177 CCGTCAAAGTCAGCAGCGG 61.671 63.158 0.00 0.00 0.00 5.52
3516 3687 1.661112 CTTTGATTCCTCTTCCGCGTC 59.339 52.381 4.92 0.00 0.00 5.19
3519 3690 2.010497 GTCCTTTGATTCCTCTTCCGC 58.990 52.381 0.00 0.00 0.00 5.54
3523 3694 6.490040 TCAAAAATCGTCCTTTGATTCCTCTT 59.510 34.615 5.02 0.00 36.79 2.85
3524 3695 6.003950 TCAAAAATCGTCCTTTGATTCCTCT 58.996 36.000 5.02 0.00 36.79 3.69
3525 3696 6.254281 TCAAAAATCGTCCTTTGATTCCTC 57.746 37.500 5.02 0.00 36.79 3.71
3526 3697 5.183904 CCTCAAAAATCGTCCTTTGATTCCT 59.816 40.000 8.32 0.00 39.97 3.36
3527 3698 5.183140 TCCTCAAAAATCGTCCTTTGATTCC 59.817 40.000 8.32 0.00 39.97 3.01
3531 3702 5.183140 GGAATCCTCAAAAATCGTCCTTTGA 59.817 40.000 0.00 7.82 38.81 2.69
3532 3703 5.048083 TGGAATCCTCAAAAATCGTCCTTTG 60.048 40.000 0.00 0.00 34.49 2.77
3539 3710 5.412594 TCTTCACTGGAATCCTCAAAAATCG 59.587 40.000 0.00 0.00 31.34 3.34
3541 3712 5.182001 CGTCTTCACTGGAATCCTCAAAAAT 59.818 40.000 0.00 0.00 31.34 1.82
3545 3716 2.028112 CCGTCTTCACTGGAATCCTCAA 60.028 50.000 0.00 0.00 31.34 3.02
3548 3719 1.645710 ACCGTCTTCACTGGAATCCT 58.354 50.000 0.00 0.00 31.34 3.24
3550 3721 2.996621 CTGAACCGTCTTCACTGGAATC 59.003 50.000 0.00 0.00 31.34 2.52
3552 3723 1.760613 ACTGAACCGTCTTCACTGGAA 59.239 47.619 0.00 0.00 0.00 3.53
3554 3725 2.240493 AACTGAACCGTCTTCACTGG 57.760 50.000 0.00 0.00 0.00 4.00
3556 3727 5.180271 TGTAAAAACTGAACCGTCTTCACT 58.820 37.500 0.00 0.00 0.00 3.41
3557 3728 5.292589 TCTGTAAAAACTGAACCGTCTTCAC 59.707 40.000 0.00 0.00 0.00 3.18
3558 3729 5.421277 TCTGTAAAAACTGAACCGTCTTCA 58.579 37.500 0.00 0.00 0.00 3.02
3560 3731 6.746745 TTTCTGTAAAAACTGAACCGTCTT 57.253 33.333 0.00 0.00 0.00 3.01
3561 3732 6.766467 AGATTTCTGTAAAAACTGAACCGTCT 59.234 34.615 0.00 1.32 0.00 4.18
3562 3733 6.851330 CAGATTTCTGTAAAAACTGAACCGTC 59.149 38.462 0.00 0.00 39.09 4.79
3563 3734 6.540914 TCAGATTTCTGTAAAAACTGAACCGT 59.459 34.615 7.42 0.00 44.12 4.83
3564 3735 6.954944 TCAGATTTCTGTAAAAACTGAACCG 58.045 36.000 7.42 0.00 44.12 4.44
3565 3736 9.581099 TTTTCAGATTTCTGTAAAAACTGAACC 57.419 29.630 17.40 2.79 43.41 3.62
3577 3761 7.199766 TGTGCGTAAAATTTTCAGATTTCTGT 58.800 30.769 6.72 0.00 44.12 3.41
3589 3773 5.453648 TCGTTTATGCTGTGCGTAAAATTT 58.546 33.333 15.62 0.00 46.80 1.82
3598 3797 1.265635 TGGTGTTCGTTTATGCTGTGC 59.734 47.619 0.00 0.00 0.00 4.57
3599 3798 3.617540 TTGGTGTTCGTTTATGCTGTG 57.382 42.857 0.00 0.00 0.00 3.66
3602 3801 4.518970 ACAGATTTGGTGTTCGTTTATGCT 59.481 37.500 0.00 0.00 0.00 3.79
3603 3802 4.794169 ACAGATTTGGTGTTCGTTTATGC 58.206 39.130 0.00 0.00 0.00 3.14
3605 3804 6.932400 TGTCTACAGATTTGGTGTTCGTTTAT 59.068 34.615 0.00 0.00 0.00 1.40
3608 3807 4.699637 TGTCTACAGATTTGGTGTTCGTT 58.300 39.130 0.00 0.00 0.00 3.85
3610 3809 5.862924 ATTGTCTACAGATTTGGTGTTCG 57.137 39.130 0.00 0.00 0.00 3.95
3612 3811 8.908903 TGTAAAATTGTCTACAGATTTGGTGTT 58.091 29.630 5.81 0.00 0.00 3.32
3614 3813 8.783093 TCTGTAAAATTGTCTACAGATTTGGTG 58.217 33.333 15.96 0.00 45.69 4.17
3622 3821 7.438160 TGACAGTGTCTGTAAAATTGTCTACAG 59.562 37.037 23.29 12.97 45.44 2.74
3623 3822 7.269316 TGACAGTGTCTGTAAAATTGTCTACA 58.731 34.615 23.29 0.00 45.44 2.74
3624 3823 7.652105 TCTGACAGTGTCTGTAAAATTGTCTAC 59.348 37.037 23.29 0.00 45.44 2.59
3625 3824 7.722363 TCTGACAGTGTCTGTAAAATTGTCTA 58.278 34.615 23.29 0.89 45.44 2.59
3626 3825 6.582636 TCTGACAGTGTCTGTAAAATTGTCT 58.417 36.000 23.29 0.00 45.44 3.41
3627 3826 6.844696 TCTGACAGTGTCTGTAAAATTGTC 57.155 37.500 23.29 0.00 45.44 3.18
3628 3827 6.428159 GGATCTGACAGTGTCTGTAAAATTGT 59.572 38.462 23.29 4.85 45.44 2.71
3629 3828 6.427853 TGGATCTGACAGTGTCTGTAAAATTG 59.572 38.462 23.29 3.87 45.44 2.32
3630 3829 6.533730 TGGATCTGACAGTGTCTGTAAAATT 58.466 36.000 23.29 6.53 45.44 1.82
3631 3830 6.114187 TGGATCTGACAGTGTCTGTAAAAT 57.886 37.500 23.29 12.23 45.44 1.82
3632 3831 5.511373 CCTGGATCTGACAGTGTCTGTAAAA 60.511 44.000 23.29 8.09 45.44 1.52
3633 3832 4.021104 CCTGGATCTGACAGTGTCTGTAAA 60.021 45.833 23.29 8.43 45.44 2.01
3634 3833 3.511540 CCTGGATCTGACAGTGTCTGTAA 59.488 47.826 23.29 9.11 45.44 2.41
3635 3834 3.092301 CCTGGATCTGACAGTGTCTGTA 58.908 50.000 23.29 13.10 45.44 2.74
3638 3837 1.077828 TCCCTGGATCTGACAGTGTCT 59.922 52.381 23.29 3.92 34.16 3.41
3652 3851 0.902531 AGGTACACGATTGTCCCTGG 59.097 55.000 0.00 0.00 40.50 4.45
3660 3859 1.139058 GGCATCTCCAGGTACACGATT 59.861 52.381 0.00 0.00 34.01 3.34
3664 3863 1.137872 CAGAGGCATCTCCAGGTACAC 59.862 57.143 0.00 0.00 40.83 2.90
3669 3868 1.686052 GTCTACAGAGGCATCTCCAGG 59.314 57.143 0.00 0.00 40.83 4.45
3701 3900 2.748605 CCTGCCATTAGCTTAGAGACG 58.251 52.381 0.00 0.00 44.23 4.18
3704 3903 2.926778 AGCCTGCCATTAGCTTAGAG 57.073 50.000 0.00 0.00 44.23 2.43
3747 3952 3.960755 TCTCTAGAATGATTTGGAGCCGA 59.039 43.478 0.00 0.00 0.00 5.54
3765 3970 3.139397 AGAGTCGGATTAGGTGGATCTCT 59.861 47.826 0.00 0.00 0.00 3.10
3802 4012 1.661341 CACAGGAGTGCTAATCAGGC 58.339 55.000 0.00 0.00 39.21 4.85
3815 4025 2.425592 CCAACTGGACGCACAGGA 59.574 61.111 11.10 0.00 42.75 3.86
3816 4026 3.357079 GCCAACTGGACGCACAGG 61.357 66.667 11.10 0.00 42.75 4.00
3833 4047 1.469703 TGCCATGCGTTTCATCAGAAG 59.530 47.619 0.00 0.00 34.71 2.85
3846 4060 6.254157 CAGTAATTAAACAACTGATGCCATGC 59.746 38.462 8.70 0.00 42.59 4.06
3929 4146 1.681264 AGTTTGTTCCTCCCTTTTGCG 59.319 47.619 0.00 0.00 0.00 4.85
3945 4162 3.121738 ACGCTGCCAGTTAGTTAGTTT 57.878 42.857 0.00 0.00 0.00 2.66
4012 4233 4.477975 GAGGACCGTGGACGAGCG 62.478 72.222 0.00 0.00 43.02 5.03
4021 4242 0.531200 GACCGATTGAAGAGGACCGT 59.469 55.000 0.00 0.00 0.00 4.83
4029 4250 4.034048 CCGATTAACAAGGACCGATTGAAG 59.966 45.833 0.67 0.00 0.00 3.02
4030 4251 3.936453 CCGATTAACAAGGACCGATTGAA 59.064 43.478 0.67 0.00 0.00 2.69
4032 4253 2.031683 GCCGATTAACAAGGACCGATTG 59.968 50.000 0.00 0.00 0.00 2.67
4039 4260 2.218953 CGCTAGCCGATTAACAAGGA 57.781 50.000 9.66 0.00 40.02 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.