Multiple sequence alignment - TraesCS2B01G108700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G108700 chr2B 100.000 3409 0 0 1 3409 69351311 69354719 0.000000e+00 6296.0
1 TraesCS2B01G108700 chr2B 96.015 2735 66 11 679 3409 750454421 750451726 0.000000e+00 4407.0
2 TraesCS2B01G108700 chr2B 97.578 2436 57 2 679 3112 23131089 23133524 0.000000e+00 4170.0
3 TraesCS2B01G108700 chr2B 81.940 1495 165 66 1687 3112 748925827 748924369 0.000000e+00 1168.0
4 TraesCS2B01G108700 chr2B 100.000 47 0 0 3127 3173 23133598 23133644 1.690000e-13 87.9
5 TraesCS2B01G108700 chr2B 84.286 70 7 4 3142 3210 23133572 23133638 7.900000e-07 65.8
6 TraesCS2B01G108700 chr1B 97.997 2746 40 3 677 3409 460164089 460161346 0.000000e+00 4752.0
7 TraesCS2B01G108700 chr1B 97.460 2756 44 3 679 3409 544798310 544795556 0.000000e+00 4678.0
8 TraesCS2B01G108700 chr1B 97.195 2745 59 5 679 3409 94936277 94933537 0.000000e+00 4626.0
9 TraesCS2B01G108700 chr1B 96.045 2756 80 15 679 3405 569427324 569430079 0.000000e+00 4458.0
10 TraesCS2B01G108700 chr1B 96.062 2565 51 10 679 3199 668657476 668660034 0.000000e+00 4132.0
11 TraesCS2B01G108700 chr1B 88.022 359 41 2 267 625 614586285 614585929 1.130000e-114 424.0
12 TraesCS2B01G108700 chr1B 96.059 203 6 2 451 653 589507950 589508150 2.540000e-86 329.0
13 TraesCS2B01G108700 chr1B 100.000 43 0 0 636 678 589510650 589510692 2.820000e-11 80.5
14 TraesCS2B01G108700 chr6B 96.316 2769 64 20 679 3409 661538893 661541661 0.000000e+00 4514.0
15 TraesCS2B01G108700 chr7B 97.399 2537 46 8 679 3199 41046987 41049519 0.000000e+00 4301.0
16 TraesCS2B01G108700 chr7A 91.982 661 42 6 21 678 316027807 316028459 0.000000e+00 917.0
17 TraesCS2B01G108700 chr7A 93.145 248 14 2 3162 3409 147917739 147917495 8.990000e-96 361.0
18 TraesCS2B01G108700 chr7A 90.909 220 13 3 21 239 130082344 130082131 4.300000e-74 289.0
19 TraesCS2B01G108700 chr7A 90.206 194 13 3 47 239 211219168 211218980 7.310000e-62 248.0
20 TraesCS2B01G108700 chr7A 88.660 194 12 4 47 239 261401527 261401711 9.520000e-56 228.0
21 TraesCS2B01G108700 chr7D 89.985 669 37 8 19 683 279734938 279734296 0.000000e+00 837.0
22 TraesCS2B01G108700 chr3D 91.530 366 27 4 260 625 112726816 112726455 5.080000e-138 501.0
23 TraesCS2B01G108700 chr3D 96.053 152 5 1 528 678 495792507 495792658 2.630000e-61 246.0
24 TraesCS2B01G108700 chr3B 90.314 382 31 4 244 625 163706193 163705818 2.360000e-136 496.0
25 TraesCS2B01G108700 chr4A 93.952 248 12 2 3162 3409 604386694 604386450 4.150000e-99 372.0
26 TraesCS2B01G108700 chr3A 85.286 367 36 5 274 625 108472565 108472202 2.500000e-96 363.0
27 TraesCS2B01G108700 chr3A 91.237 194 11 3 47 239 57475878 57476066 3.370000e-65 259.0
28 TraesCS2B01G108700 chr6A 93.145 248 14 2 3162 3409 162657088 162657332 8.990000e-96 361.0
29 TraesCS2B01G108700 chr6A 94.079 152 8 1 528 678 15885720 15885871 2.650000e-56 230.0
30 TraesCS2B01G108700 chr6A 96.203 79 2 1 38 116 15885646 15885723 9.930000e-26 128.0
31 TraesCS2B01G108700 chr5A 97.129 209 6 0 3201 3409 650153252 650153460 1.500000e-93 353.0
32 TraesCS2B01G108700 chr5A 92.273 220 11 3 21 239 353160000 353159786 1.190000e-79 307.0
33 TraesCS2B01G108700 chr6D 94.079 152 8 1 528 678 436665191 436665342 2.650000e-56 230.0
34 TraesCS2B01G108700 chr6D 94.792 96 5 0 21 116 436665099 436665194 2.120000e-32 150.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G108700 chr2B 69351311 69354719 3408 False 6296.000000 6296 100.000000 1 3409 1 chr2B.!!$F1 3408
1 TraesCS2B01G108700 chr2B 750451726 750454421 2695 True 4407.000000 4407 96.015000 679 3409 1 chr2B.!!$R2 2730
2 TraesCS2B01G108700 chr2B 23131089 23133644 2555 False 1441.233333 4170 93.954667 679 3210 3 chr2B.!!$F2 2531
3 TraesCS2B01G108700 chr2B 748924369 748925827 1458 True 1168.000000 1168 81.940000 1687 3112 1 chr2B.!!$R1 1425
4 TraesCS2B01G108700 chr1B 460161346 460164089 2743 True 4752.000000 4752 97.997000 677 3409 1 chr1B.!!$R2 2732
5 TraesCS2B01G108700 chr1B 544795556 544798310 2754 True 4678.000000 4678 97.460000 679 3409 1 chr1B.!!$R3 2730
6 TraesCS2B01G108700 chr1B 94933537 94936277 2740 True 4626.000000 4626 97.195000 679 3409 1 chr1B.!!$R1 2730
7 TraesCS2B01G108700 chr1B 569427324 569430079 2755 False 4458.000000 4458 96.045000 679 3405 1 chr1B.!!$F1 2726
8 TraesCS2B01G108700 chr1B 668657476 668660034 2558 False 4132.000000 4132 96.062000 679 3199 1 chr1B.!!$F2 2520
9 TraesCS2B01G108700 chr1B 589507950 589510692 2742 False 204.750000 329 98.029500 451 678 2 chr1B.!!$F3 227
10 TraesCS2B01G108700 chr6B 661538893 661541661 2768 False 4514.000000 4514 96.316000 679 3409 1 chr6B.!!$F1 2730
11 TraesCS2B01G108700 chr7B 41046987 41049519 2532 False 4301.000000 4301 97.399000 679 3199 1 chr7B.!!$F1 2520
12 TraesCS2B01G108700 chr7A 316027807 316028459 652 False 917.000000 917 91.982000 21 678 1 chr7A.!!$F2 657
13 TraesCS2B01G108700 chr7D 279734296 279734938 642 True 837.000000 837 89.985000 19 683 1 chr7D.!!$R1 664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
567 568 0.034574 TAGTTTCCCGCATGGCATGT 60.035 50.0 26.94 8.6 0.0 3.21 F
569 570 0.037419 GTTTCCCGCATGGCATGTTT 60.037 50.0 26.94 0.0 0.0 2.83 F
974 978 0.242286 GCTCACTCTCTCGTTGCTCA 59.758 55.0 0.00 0.0 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1973 3093 1.202855 CCATCCTACCATCCTGCCAAG 60.203 57.143 0.00 0.0 0.0 3.61 R
2311 3572 6.382919 AAAGGCCTTTGGATGTACTTACTA 57.617 37.500 29.91 0.0 0.0 1.82 R
2817 4220 2.042435 CGCCTCCTCCTCCTCCTT 60.042 66.667 0.00 0.0 0.0 3.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 2.495669 CGGTGAAACTGGGGCAATATTT 59.504 45.455 0.00 0.00 40.35 1.40
45 46 3.056179 CGGTGAAACTGGGGCAATATTTT 60.056 43.478 0.00 0.00 40.35 1.82
46 47 4.503910 GGTGAAACTGGGGCAATATTTTC 58.496 43.478 0.00 0.00 36.74 2.29
47 48 4.020662 GGTGAAACTGGGGCAATATTTTCA 60.021 41.667 0.00 0.00 36.74 2.69
48 49 5.338300 GGTGAAACTGGGGCAATATTTTCAT 60.338 40.000 5.62 0.00 35.89 2.57
49 50 6.172630 GTGAAACTGGGGCAATATTTTCATT 58.827 36.000 5.62 0.00 35.89 2.57
50 51 6.092533 GTGAAACTGGGGCAATATTTTCATTG 59.907 38.462 5.62 0.00 35.89 2.82
51 52 5.760484 AACTGGGGCAATATTTTCATTGT 57.240 34.783 0.00 0.00 38.04 2.71
52 53 5.760484 ACTGGGGCAATATTTTCATTGTT 57.240 34.783 0.00 0.00 38.04 2.83
53 54 5.490159 ACTGGGGCAATATTTTCATTGTTG 58.510 37.500 0.00 0.00 38.04 3.33
54 55 5.012975 ACTGGGGCAATATTTTCATTGTTGT 59.987 36.000 0.00 0.00 38.04 3.32
55 56 6.212388 ACTGGGGCAATATTTTCATTGTTGTA 59.788 34.615 0.00 0.00 38.04 2.41
56 57 7.092935 ACTGGGGCAATATTTTCATTGTTGTAT 60.093 33.333 0.00 0.00 38.04 2.29
57 58 8.311395 TGGGGCAATATTTTCATTGTTGTATA 57.689 30.769 0.00 0.00 38.04 1.47
58 59 8.200792 TGGGGCAATATTTTCATTGTTGTATAC 58.799 33.333 0.00 0.00 38.04 1.47
59 60 8.421002 GGGGCAATATTTTCATTGTTGTATACT 58.579 33.333 4.17 0.00 38.04 2.12
89 90 9.450807 GTTACACATATGATTTCATAGTTTGGC 57.549 33.333 10.38 0.00 41.58 4.52
90 91 7.643569 ACACATATGATTTCATAGTTTGGCA 57.356 32.000 10.38 0.00 41.58 4.92
91 92 8.065473 ACACATATGATTTCATAGTTTGGCAA 57.935 30.769 10.38 0.00 41.58 4.52
92 93 8.192774 ACACATATGATTTCATAGTTTGGCAAG 58.807 33.333 10.38 0.00 41.58 4.01
93 94 8.192774 CACATATGATTTCATAGTTTGGCAAGT 58.807 33.333 10.38 0.00 41.58 3.16
94 95 9.407380 ACATATGATTTCATAGTTTGGCAAGTA 57.593 29.630 10.38 0.00 41.58 2.24
97 98 7.936496 TGATTTCATAGTTTGGCAAGTATCA 57.064 32.000 0.00 1.00 0.00 2.15
98 99 7.761409 TGATTTCATAGTTTGGCAAGTATCAC 58.239 34.615 0.00 0.00 0.00 3.06
99 100 7.392953 TGATTTCATAGTTTGGCAAGTATCACA 59.607 33.333 0.00 0.00 0.00 3.58
100 101 6.741992 TTCATAGTTTGGCAAGTATCACAG 57.258 37.500 0.00 0.00 0.00 3.66
101 102 6.048732 TCATAGTTTGGCAAGTATCACAGA 57.951 37.500 0.00 0.00 0.00 3.41
102 103 6.472016 TCATAGTTTGGCAAGTATCACAGAA 58.528 36.000 0.00 0.00 0.00 3.02
103 104 7.112122 TCATAGTTTGGCAAGTATCACAGAAT 58.888 34.615 0.00 0.00 0.00 2.40
104 105 7.611467 TCATAGTTTGGCAAGTATCACAGAATT 59.389 33.333 0.00 0.00 0.00 2.17
105 106 6.655078 AGTTTGGCAAGTATCACAGAATTT 57.345 33.333 0.00 0.00 0.00 1.82
106 107 6.449698 AGTTTGGCAAGTATCACAGAATTTG 58.550 36.000 0.00 0.00 0.00 2.32
107 108 6.040842 AGTTTGGCAAGTATCACAGAATTTGT 59.959 34.615 0.00 0.00 41.94 2.83
123 124 9.959721 ACAGAATTTGTGGTTGAGTACTTATAT 57.040 29.630 0.00 0.00 38.99 0.86
125 126 9.614792 AGAATTTGTGGTTGAGTACTTATATCC 57.385 33.333 0.00 0.00 0.00 2.59
126 127 9.391006 GAATTTGTGGTTGAGTACTTATATCCA 57.609 33.333 0.00 0.00 0.00 3.41
127 128 9.747898 AATTTGTGGTTGAGTACTTATATCCAA 57.252 29.630 0.00 0.00 0.00 3.53
128 129 9.747898 ATTTGTGGTTGAGTACTTATATCCAAA 57.252 29.630 0.00 4.23 0.00 3.28
129 130 9.575868 TTTGTGGTTGAGTACTTATATCCAAAA 57.424 29.630 0.00 1.72 0.00 2.44
130 131 9.747898 TTGTGGTTGAGTACTTATATCCAAAAT 57.252 29.630 0.00 0.00 0.00 1.82
131 132 9.391006 TGTGGTTGAGTACTTATATCCAAAATC 57.609 33.333 0.00 0.00 0.00 2.17
132 133 9.391006 GTGGTTGAGTACTTATATCCAAAATCA 57.609 33.333 0.00 0.00 0.00 2.57
137 138 9.476202 TGAGTACTTATATCCAAAATCATCGTG 57.524 33.333 0.00 0.00 0.00 4.35
138 139 9.477484 GAGTACTTATATCCAAAATCATCGTGT 57.523 33.333 0.00 0.00 0.00 4.49
139 140 9.832445 AGTACTTATATCCAAAATCATCGTGTT 57.168 29.630 0.00 0.00 0.00 3.32
142 143 8.774586 ACTTATATCCAAAATCATCGTGTTAGC 58.225 33.333 0.00 0.00 0.00 3.09
143 144 8.669946 TTATATCCAAAATCATCGTGTTAGCA 57.330 30.769 0.00 0.00 0.00 3.49
144 145 4.678509 TCCAAAATCATCGTGTTAGCAC 57.321 40.909 0.00 0.00 41.97 4.40
145 146 4.323417 TCCAAAATCATCGTGTTAGCACT 58.677 39.130 8.15 0.00 43.16 4.40
146 147 4.154015 TCCAAAATCATCGTGTTAGCACTG 59.846 41.667 8.15 0.61 43.16 3.66
147 148 4.154015 CCAAAATCATCGTGTTAGCACTGA 59.846 41.667 8.15 6.17 43.16 3.41
148 149 5.334802 CCAAAATCATCGTGTTAGCACTGAA 60.335 40.000 8.15 0.00 43.16 3.02
149 150 5.536554 AAATCATCGTGTTAGCACTGAAG 57.463 39.130 8.15 4.70 43.16 3.02
150 151 3.660501 TCATCGTGTTAGCACTGAAGT 57.339 42.857 8.15 0.00 43.16 3.01
151 152 3.990092 TCATCGTGTTAGCACTGAAGTT 58.010 40.909 8.15 0.00 43.16 2.66
152 153 5.128992 TCATCGTGTTAGCACTGAAGTTA 57.871 39.130 8.15 0.00 43.16 2.24
153 154 4.921515 TCATCGTGTTAGCACTGAAGTTAC 59.078 41.667 8.15 0.00 43.16 2.50
154 155 4.579454 TCGTGTTAGCACTGAAGTTACT 57.421 40.909 8.15 0.00 43.16 2.24
155 156 4.940463 TCGTGTTAGCACTGAAGTTACTT 58.060 39.130 8.15 0.00 43.16 2.24
156 157 5.353938 TCGTGTTAGCACTGAAGTTACTTT 58.646 37.500 8.15 0.00 43.16 2.66
157 158 6.506147 TCGTGTTAGCACTGAAGTTACTTTA 58.494 36.000 8.15 0.00 43.16 1.85
158 159 7.149973 TCGTGTTAGCACTGAAGTTACTTTAT 58.850 34.615 8.15 0.00 43.16 1.40
159 160 7.115805 TCGTGTTAGCACTGAAGTTACTTTATG 59.884 37.037 8.15 0.00 43.16 1.90
160 161 7.095774 CGTGTTAGCACTGAAGTTACTTTATGT 60.096 37.037 8.15 0.00 43.16 2.29
161 162 9.199982 GTGTTAGCACTGAAGTTACTTTATGTA 57.800 33.333 1.96 0.00 42.13 2.29
162 163 9.938280 TGTTAGCACTGAAGTTACTTTATGTAT 57.062 29.630 0.00 0.00 0.00 2.29
165 166 8.848474 AGCACTGAAGTTACTTTATGTATTGT 57.152 30.769 0.00 0.00 0.00 2.71
166 167 9.284968 AGCACTGAAGTTACTTTATGTATTGTT 57.715 29.630 0.00 0.00 0.00 2.83
178 179 9.243105 ACTTTATGTATTGTTATTGAGTTGCCT 57.757 29.630 0.00 0.00 0.00 4.75
184 185 9.019656 TGTATTGTTATTGAGTTGCCTTAATGT 57.980 29.630 0.00 0.00 30.33 2.71
185 186 9.855021 GTATTGTTATTGAGTTGCCTTAATGTT 57.145 29.630 0.00 0.00 30.33 2.71
187 188 8.810652 TTGTTATTGAGTTGCCTTAATGTTTC 57.189 30.769 0.00 0.00 30.33 2.78
188 189 7.375053 TGTTATTGAGTTGCCTTAATGTTTCC 58.625 34.615 0.00 0.00 30.33 3.13
189 190 4.864704 TTGAGTTGCCTTAATGTTTCCC 57.135 40.909 0.00 0.00 0.00 3.97
190 191 2.817258 TGAGTTGCCTTAATGTTTCCCG 59.183 45.455 0.00 0.00 0.00 5.14
191 192 2.817844 GAGTTGCCTTAATGTTTCCCGT 59.182 45.455 0.00 0.00 0.00 5.28
192 193 2.556622 AGTTGCCTTAATGTTTCCCGTG 59.443 45.455 0.00 0.00 0.00 4.94
193 194 0.885196 TGCCTTAATGTTTCCCGTGC 59.115 50.000 0.00 0.00 0.00 5.34
194 195 1.173913 GCCTTAATGTTTCCCGTGCT 58.826 50.000 0.00 0.00 0.00 4.40
195 196 2.290387 TGCCTTAATGTTTCCCGTGCTA 60.290 45.455 0.00 0.00 0.00 3.49
196 197 2.949644 GCCTTAATGTTTCCCGTGCTAT 59.050 45.455 0.00 0.00 0.00 2.97
197 198 3.003378 GCCTTAATGTTTCCCGTGCTATC 59.997 47.826 0.00 0.00 0.00 2.08
198 199 4.196193 CCTTAATGTTTCCCGTGCTATCA 58.804 43.478 0.00 0.00 0.00 2.15
199 200 4.638421 CCTTAATGTTTCCCGTGCTATCAA 59.362 41.667 0.00 0.00 0.00 2.57
200 201 5.220854 CCTTAATGTTTCCCGTGCTATCAAG 60.221 44.000 0.00 0.00 0.00 3.02
201 202 3.627395 ATGTTTCCCGTGCTATCAAGA 57.373 42.857 0.00 0.00 0.00 3.02
202 203 3.627395 TGTTTCCCGTGCTATCAAGAT 57.373 42.857 0.00 0.00 0.00 2.40
203 204 3.531538 TGTTTCCCGTGCTATCAAGATC 58.468 45.455 0.00 0.00 0.00 2.75
204 205 2.872858 GTTTCCCGTGCTATCAAGATCC 59.127 50.000 0.00 0.00 0.00 3.36
205 206 1.788229 TCCCGTGCTATCAAGATCCA 58.212 50.000 0.00 0.00 0.00 3.41
206 207 2.329267 TCCCGTGCTATCAAGATCCAT 58.671 47.619 0.00 0.00 0.00 3.41
207 208 2.300152 TCCCGTGCTATCAAGATCCATC 59.700 50.000 0.00 0.00 0.00 3.51
208 209 2.301296 CCCGTGCTATCAAGATCCATCT 59.699 50.000 0.00 0.00 39.22 2.90
209 210 3.511540 CCCGTGCTATCAAGATCCATCTA 59.488 47.826 0.00 0.00 35.76 1.98
210 211 4.161189 CCCGTGCTATCAAGATCCATCTAT 59.839 45.833 0.00 0.00 35.76 1.98
211 212 5.107824 CCGTGCTATCAAGATCCATCTATG 58.892 45.833 0.00 0.00 35.76 2.23
212 213 5.337089 CCGTGCTATCAAGATCCATCTATGT 60.337 44.000 0.00 0.00 35.76 2.29
213 214 6.162079 CGTGCTATCAAGATCCATCTATGTT 58.838 40.000 0.00 0.00 35.76 2.71
214 215 6.309980 CGTGCTATCAAGATCCATCTATGTTC 59.690 42.308 0.00 0.00 35.76 3.18
215 216 7.385267 GTGCTATCAAGATCCATCTATGTTCT 58.615 38.462 0.00 0.00 35.76 3.01
216 217 8.526978 GTGCTATCAAGATCCATCTATGTTCTA 58.473 37.037 0.00 0.00 35.76 2.10
217 218 9.264653 TGCTATCAAGATCCATCTATGTTCTAT 57.735 33.333 0.00 0.00 35.76 1.98
245 246 9.796120 TTTTATAACCATCCAAAATCGCTAAAG 57.204 29.630 0.00 0.00 0.00 1.85
246 247 3.782889 ACCATCCAAAATCGCTAAAGC 57.217 42.857 0.00 0.00 37.78 3.51
247 248 3.356290 ACCATCCAAAATCGCTAAAGCT 58.644 40.909 0.00 0.00 39.32 3.74
248 249 3.129287 ACCATCCAAAATCGCTAAAGCTG 59.871 43.478 0.00 0.00 39.32 4.24
249 250 3.489738 CCATCCAAAATCGCTAAAGCTGG 60.490 47.826 0.00 0.88 39.32 4.85
250 251 1.472480 TCCAAAATCGCTAAAGCTGGC 59.528 47.619 0.00 0.00 39.32 4.85
251 252 1.202114 CCAAAATCGCTAAAGCTGGCA 59.798 47.619 0.00 0.00 39.32 4.92
252 253 2.523015 CAAAATCGCTAAAGCTGGCAG 58.477 47.619 10.94 10.94 39.32 4.85
253 254 1.826385 AAATCGCTAAAGCTGGCAGT 58.174 45.000 17.16 0.00 39.32 4.40
254 255 1.373570 AATCGCTAAAGCTGGCAGTC 58.626 50.000 17.16 8.57 39.32 3.51
255 256 0.462759 ATCGCTAAAGCTGGCAGTCC 60.463 55.000 17.16 0.00 39.32 3.85
256 257 1.375908 CGCTAAAGCTGGCAGTCCA 60.376 57.895 17.16 0.00 41.10 4.02
257 258 0.955428 CGCTAAAGCTGGCAGTCCAA 60.955 55.000 17.16 0.00 42.91 3.53
258 259 1.247567 GCTAAAGCTGGCAGTCCAAA 58.752 50.000 17.16 0.00 42.91 3.28
259 260 1.068264 GCTAAAGCTGGCAGTCCAAAC 60.068 52.381 17.16 0.00 42.91 2.93
260 261 2.229792 CTAAAGCTGGCAGTCCAAACA 58.770 47.619 17.16 0.00 42.91 2.83
261 262 1.484038 AAAGCTGGCAGTCCAAACAA 58.516 45.000 17.16 0.00 42.91 2.83
262 263 1.484038 AAGCTGGCAGTCCAAACAAA 58.516 45.000 17.16 0.00 42.91 2.83
263 264 1.708341 AGCTGGCAGTCCAAACAAAT 58.292 45.000 17.16 0.00 42.91 2.32
264 265 2.041701 AGCTGGCAGTCCAAACAAATT 58.958 42.857 17.16 0.00 42.91 1.82
265 266 2.137523 GCTGGCAGTCCAAACAAATTG 58.862 47.619 17.16 0.00 42.91 2.32
266 267 2.483538 GCTGGCAGTCCAAACAAATTGT 60.484 45.455 17.16 0.00 42.91 2.71
267 268 3.125316 CTGGCAGTCCAAACAAATTGTG 58.875 45.455 6.28 0.00 42.91 3.33
268 269 2.762887 TGGCAGTCCAAACAAATTGTGA 59.237 40.909 0.00 0.00 39.99 3.58
269 270 3.123050 GGCAGTCCAAACAAATTGTGAC 58.877 45.455 0.00 3.18 38.47 3.67
270 271 3.430098 GGCAGTCCAAACAAATTGTGACA 60.430 43.478 14.65 0.00 39.60 3.58
271 272 4.370917 GCAGTCCAAACAAATTGTGACAT 58.629 39.130 14.65 1.57 39.60 3.06
272 273 4.209703 GCAGTCCAAACAAATTGTGACATG 59.790 41.667 14.65 11.26 39.60 3.21
273 274 5.350633 CAGTCCAAACAAATTGTGACATGT 58.649 37.500 14.65 0.00 39.60 3.21
274 275 5.459762 CAGTCCAAACAAATTGTGACATGTC 59.540 40.000 19.27 19.27 39.60 3.06
275 276 5.126869 AGTCCAAACAAATTGTGACATGTCA 59.873 36.000 24.56 24.56 39.60 3.58
276 277 5.984926 GTCCAAACAAATTGTGACATGTCAT 59.015 36.000 30.10 13.09 42.18 3.06
277 278 5.984323 TCCAAACAAATTGTGACATGTCATG 59.016 36.000 30.10 24.37 42.18 3.07
278 279 5.754406 CCAAACAAATTGTGACATGTCATGT 59.246 36.000 30.10 24.98 42.18 3.21
279 280 6.258287 CCAAACAAATTGTGACATGTCATGTT 59.742 34.615 30.10 28.47 42.18 2.71
280 281 7.201626 CCAAACAAATTGTGACATGTCATGTTT 60.202 33.333 32.32 32.32 43.09 2.83
281 282 6.831727 ACAAATTGTGACATGTCATGTTTG 57.168 33.333 33.44 33.44 45.03 2.93
282 283 6.571605 ACAAATTGTGACATGTCATGTTTGA 58.428 32.000 37.09 22.54 45.03 2.69
283 284 7.211573 ACAAATTGTGACATGTCATGTTTGAT 58.788 30.769 37.09 27.76 45.03 2.57
284 285 7.383029 ACAAATTGTGACATGTCATGTTTGATC 59.617 33.333 37.09 24.44 45.03 2.92
285 286 6.578163 ATTGTGACATGTCATGTTTGATCA 57.422 33.333 30.10 17.83 45.03 2.92
286 287 6.388435 TTGTGACATGTCATGTTTGATCAA 57.612 33.333 30.10 22.04 45.03 2.57
287 288 6.388435 TGTGACATGTCATGTTTGATCAAA 57.612 33.333 30.10 16.91 45.03 2.69
288 289 6.983984 TGTGACATGTCATGTTTGATCAAAT 58.016 32.000 30.10 6.32 45.03 2.32
289 290 7.435305 TGTGACATGTCATGTTTGATCAAATT 58.565 30.769 30.10 11.72 45.03 1.82
290 291 7.927092 TGTGACATGTCATGTTTGATCAAATTT 59.073 29.630 30.10 11.38 45.03 1.82
291 292 9.409312 GTGACATGTCATGTTTGATCAAATTTA 57.591 29.630 30.10 13.32 45.03 1.40
332 333 6.662414 CACATTTGTGGTGATAATCGTAGT 57.338 37.500 2.69 0.00 42.10 2.73
333 334 6.477742 CACATTTGTGGTGATAATCGTAGTG 58.522 40.000 2.69 0.00 42.10 2.74
334 335 5.584649 ACATTTGTGGTGATAATCGTAGTGG 59.415 40.000 0.00 0.00 0.00 4.00
335 336 5.408880 TTTGTGGTGATAATCGTAGTGGA 57.591 39.130 0.00 0.00 0.00 4.02
336 337 4.649088 TGTGGTGATAATCGTAGTGGAG 57.351 45.455 0.00 0.00 0.00 3.86
337 338 4.021229 TGTGGTGATAATCGTAGTGGAGT 58.979 43.478 0.00 0.00 0.00 3.85
338 339 5.195185 TGTGGTGATAATCGTAGTGGAGTA 58.805 41.667 0.00 0.00 0.00 2.59
339 340 5.653330 TGTGGTGATAATCGTAGTGGAGTAA 59.347 40.000 0.00 0.00 0.00 2.24
340 341 6.153170 TGTGGTGATAATCGTAGTGGAGTAAA 59.847 38.462 0.00 0.00 0.00 2.01
341 342 7.037438 GTGGTGATAATCGTAGTGGAGTAAAA 58.963 38.462 0.00 0.00 0.00 1.52
342 343 7.546667 GTGGTGATAATCGTAGTGGAGTAAAAA 59.453 37.037 0.00 0.00 0.00 1.94
343 344 7.546667 TGGTGATAATCGTAGTGGAGTAAAAAC 59.453 37.037 0.00 0.00 0.00 2.43
344 345 7.546667 GGTGATAATCGTAGTGGAGTAAAAACA 59.453 37.037 0.00 0.00 0.00 2.83
345 346 8.378421 GTGATAATCGTAGTGGAGTAAAAACAC 58.622 37.037 0.00 0.00 35.43 3.32
346 347 8.089597 TGATAATCGTAGTGGAGTAAAAACACA 58.910 33.333 0.00 0.00 37.58 3.72
347 348 9.095065 GATAATCGTAGTGGAGTAAAAACACAT 57.905 33.333 0.00 0.00 37.58 3.21
348 349 7.739498 AATCGTAGTGGAGTAAAAACACATT 57.261 32.000 0.00 0.00 37.58 2.71
349 350 7.739498 ATCGTAGTGGAGTAAAAACACATTT 57.261 32.000 0.00 0.00 37.58 2.32
350 351 7.556733 TCGTAGTGGAGTAAAAACACATTTT 57.443 32.000 0.00 0.00 43.52 1.82
352 353 8.124199 TCGTAGTGGAGTAAAAACACATTTTTC 58.876 33.333 1.22 0.00 43.10 2.29
353 354 7.911205 CGTAGTGGAGTAAAAACACATTTTTCA 59.089 33.333 1.22 0.00 43.10 2.69
354 355 9.233232 GTAGTGGAGTAAAAACACATTTTTCAG 57.767 33.333 1.22 0.00 43.10 3.02
355 356 7.836842 AGTGGAGTAAAAACACATTTTTCAGT 58.163 30.769 1.22 0.00 43.10 3.41
356 357 8.311109 AGTGGAGTAAAAACACATTTTTCAGTT 58.689 29.630 1.22 0.00 43.10 3.16
357 358 8.379902 GTGGAGTAAAAACACATTTTTCAGTTG 58.620 33.333 1.22 0.00 43.10 3.16
358 359 7.547370 TGGAGTAAAAACACATTTTTCAGTTGG 59.453 33.333 1.22 0.00 43.10 3.77
359 360 7.762159 GGAGTAAAAACACATTTTTCAGTTGGA 59.238 33.333 1.22 0.00 43.10 3.53
360 361 9.313118 GAGTAAAAACACATTTTTCAGTTGGAT 57.687 29.630 1.22 0.00 43.10 3.41
361 362 9.097257 AGTAAAAACACATTTTTCAGTTGGATG 57.903 29.630 1.22 0.00 43.10 3.51
362 363 7.920160 AAAAACACATTTTTCAGTTGGATGT 57.080 28.000 0.00 0.00 43.10 3.06
363 364 7.920160 AAAACACATTTTTCAGTTGGATGTT 57.080 28.000 0.00 0.00 34.19 2.71
364 365 7.920160 AAACACATTTTTCAGTTGGATGTTT 57.080 28.000 0.00 0.00 33.98 2.83
365 366 7.538303 AACACATTTTTCAGTTGGATGTTTC 57.462 32.000 0.00 0.00 0.00 2.78
366 367 6.048509 ACACATTTTTCAGTTGGATGTTTCC 58.951 36.000 0.00 0.00 42.94 3.13
380 381 6.827586 GGATGTTTCCATACTGGTTTTACA 57.172 37.500 0.00 0.00 42.12 2.41
381 382 7.404671 GGATGTTTCCATACTGGTTTTACAT 57.595 36.000 0.00 0.00 42.12 2.29
382 383 7.836842 GGATGTTTCCATACTGGTTTTACATT 58.163 34.615 0.00 0.00 42.12 2.71
383 384 8.962679 GGATGTTTCCATACTGGTTTTACATTA 58.037 33.333 0.00 0.00 42.12 1.90
389 390 9.521841 TTCCATACTGGTTTTACATTATTCACA 57.478 29.630 0.00 0.00 39.03 3.58
390 391 9.693739 TCCATACTGGTTTTACATTATTCACAT 57.306 29.630 0.00 0.00 39.03 3.21
391 392 9.734620 CCATACTGGTTTTACATTATTCACATG 57.265 33.333 0.00 0.00 31.35 3.21
392 393 9.236691 CATACTGGTTTTACATTATTCACATGC 57.763 33.333 0.00 0.00 0.00 4.06
393 394 6.630071 ACTGGTTTTACATTATTCACATGCC 58.370 36.000 0.00 0.00 0.00 4.40
394 395 6.210385 ACTGGTTTTACATTATTCACATGCCA 59.790 34.615 0.00 0.00 0.00 4.92
395 396 6.997655 TGGTTTTACATTATTCACATGCCAA 58.002 32.000 0.00 0.00 0.00 4.52
396 397 7.619050 TGGTTTTACATTATTCACATGCCAAT 58.381 30.769 0.00 0.00 0.00 3.16
397 398 7.763528 TGGTTTTACATTATTCACATGCCAATC 59.236 33.333 0.00 0.00 0.00 2.67
398 399 7.224557 GGTTTTACATTATTCACATGCCAATCC 59.775 37.037 0.00 0.00 0.00 3.01
399 400 7.415592 TTTACATTATTCACATGCCAATCCA 57.584 32.000 0.00 0.00 0.00 3.41
400 401 7.600231 TTACATTATTCACATGCCAATCCAT 57.400 32.000 0.00 0.00 0.00 3.41
401 402 5.849510 ACATTATTCACATGCCAATCCATG 58.150 37.500 0.00 0.94 46.19 3.66
409 410 4.196626 CATGCCAATCCATGTGTTTTCT 57.803 40.909 0.00 0.00 38.19 2.52
410 411 3.663995 TGCCAATCCATGTGTTTTCTG 57.336 42.857 0.00 0.00 0.00 3.02
411 412 2.964464 TGCCAATCCATGTGTTTTCTGT 59.036 40.909 0.00 0.00 0.00 3.41
412 413 3.387374 TGCCAATCCATGTGTTTTCTGTT 59.613 39.130 0.00 0.00 0.00 3.16
413 414 4.141756 TGCCAATCCATGTGTTTTCTGTTT 60.142 37.500 0.00 0.00 0.00 2.83
414 415 4.815846 GCCAATCCATGTGTTTTCTGTTTT 59.184 37.500 0.00 0.00 0.00 2.43
415 416 5.988561 GCCAATCCATGTGTTTTCTGTTTTA 59.011 36.000 0.00 0.00 0.00 1.52
416 417 6.481644 GCCAATCCATGTGTTTTCTGTTTTAA 59.518 34.615 0.00 0.00 0.00 1.52
417 418 7.173047 GCCAATCCATGTGTTTTCTGTTTTAAT 59.827 33.333 0.00 0.00 0.00 1.40
418 419 9.703892 CCAATCCATGTGTTTTCTGTTTTAATA 57.296 29.630 0.00 0.00 0.00 0.98
421 422 9.912634 ATCCATGTGTTTTCTGTTTTAATAGTG 57.087 29.630 0.00 0.00 0.00 2.74
422 423 8.908903 TCCATGTGTTTTCTGTTTTAATAGTGT 58.091 29.630 0.00 0.00 0.00 3.55
423 424 9.180678 CCATGTGTTTTCTGTTTTAATAGTGTC 57.819 33.333 0.00 0.00 0.00 3.67
424 425 9.729023 CATGTGTTTTCTGTTTTAATAGTGTCA 57.271 29.630 0.00 0.00 0.00 3.58
443 444 7.960262 AGTGTCATTATGATAGATGAAGCTCA 58.040 34.615 0.00 0.00 34.34 4.26
444 445 8.595421 AGTGTCATTATGATAGATGAAGCTCAT 58.405 33.333 0.00 0.00 40.34 2.90
445 446 8.657729 GTGTCATTATGATAGATGAAGCTCATG 58.342 37.037 0.00 0.00 37.20 3.07
446 447 8.591072 TGTCATTATGATAGATGAAGCTCATGA 58.409 33.333 0.00 0.00 37.20 3.07
447 448 9.433153 GTCATTATGATAGATGAAGCTCATGAA 57.567 33.333 0.00 0.00 37.20 2.57
472 473 2.487762 TCCATTTCAACCGACATCTTGC 59.512 45.455 0.00 0.00 0.00 4.01
523 524 4.574599 AAATGTGCAAGTCTGGTTTCTC 57.425 40.909 0.00 0.00 0.00 2.87
524 525 3.498774 ATGTGCAAGTCTGGTTTCTCT 57.501 42.857 0.00 0.00 0.00 3.10
525 526 3.281727 TGTGCAAGTCTGGTTTCTCTT 57.718 42.857 0.00 0.00 0.00 2.85
526 527 3.206150 TGTGCAAGTCTGGTTTCTCTTC 58.794 45.455 0.00 0.00 0.00 2.87
527 528 3.206150 GTGCAAGTCTGGTTTCTCTTCA 58.794 45.455 0.00 0.00 0.00 3.02
528 529 3.627577 GTGCAAGTCTGGTTTCTCTTCAA 59.372 43.478 0.00 0.00 0.00 2.69
529 530 3.879295 TGCAAGTCTGGTTTCTCTTCAAG 59.121 43.478 0.00 0.00 0.00 3.02
530 531 3.879892 GCAAGTCTGGTTTCTCTTCAAGT 59.120 43.478 0.00 0.00 0.00 3.16
531 532 4.024472 GCAAGTCTGGTTTCTCTTCAAGTC 60.024 45.833 0.00 0.00 0.00 3.01
532 533 5.118990 CAAGTCTGGTTTCTCTTCAAGTCA 58.881 41.667 0.00 0.00 0.00 3.41
533 534 5.559148 AGTCTGGTTTCTCTTCAAGTCAT 57.441 39.130 0.00 0.00 0.00 3.06
534 535 5.934781 AGTCTGGTTTCTCTTCAAGTCATT 58.065 37.500 0.00 0.00 0.00 2.57
535 536 6.360618 AGTCTGGTTTCTCTTCAAGTCATTT 58.639 36.000 0.00 0.00 0.00 2.32
536 537 6.261826 AGTCTGGTTTCTCTTCAAGTCATTTG 59.738 38.462 0.00 0.00 38.17 2.32
537 538 6.038714 GTCTGGTTTCTCTTCAAGTCATTTGT 59.961 38.462 0.00 0.00 38.01 2.83
538 539 6.038603 TCTGGTTTCTCTTCAAGTCATTTGTG 59.961 38.462 0.00 0.00 38.01 3.33
539 540 5.885352 TGGTTTCTCTTCAAGTCATTTGTGA 59.115 36.000 0.00 0.00 38.01 3.58
540 541 6.376864 TGGTTTCTCTTCAAGTCATTTGTGAA 59.623 34.615 0.00 0.00 38.01 3.18
541 542 7.068593 TGGTTTCTCTTCAAGTCATTTGTGAAT 59.931 33.333 0.00 0.00 38.01 2.57
542 543 8.567948 GGTTTCTCTTCAAGTCATTTGTGAATA 58.432 33.333 0.00 0.00 38.01 1.75
543 544 9.950680 GTTTCTCTTCAAGTCATTTGTGAATAA 57.049 29.630 0.00 0.00 38.01 1.40
546 547 9.288576 TCTCTTCAAGTCATTTGTGAATAATGT 57.711 29.630 0.00 0.00 38.01 2.71
547 548 9.903682 CTCTTCAAGTCATTTGTGAATAATGTT 57.096 29.630 0.00 0.00 38.01 2.71
556 557 9.921637 TCATTTGTGAATAATGTTTAGTTTCCC 57.078 29.630 0.00 0.00 35.13 3.97
557 558 8.859156 CATTTGTGAATAATGTTTAGTTTCCCG 58.141 33.333 0.00 0.00 0.00 5.14
558 559 5.945155 TGTGAATAATGTTTAGTTTCCCGC 58.055 37.500 0.00 0.00 0.00 6.13
559 560 5.473846 TGTGAATAATGTTTAGTTTCCCGCA 59.526 36.000 0.00 0.00 0.00 5.69
560 561 6.151985 TGTGAATAATGTTTAGTTTCCCGCAT 59.848 34.615 0.00 0.00 0.00 4.73
561 562 6.472163 GTGAATAATGTTTAGTTTCCCGCATG 59.528 38.462 0.00 0.00 0.00 4.06
562 563 3.866883 AATGTTTAGTTTCCCGCATGG 57.133 42.857 0.00 0.00 0.00 3.66
563 564 0.885196 TGTTTAGTTTCCCGCATGGC 59.115 50.000 0.00 0.00 0.00 4.40
564 565 0.885196 GTTTAGTTTCCCGCATGGCA 59.115 50.000 0.00 0.00 0.00 4.92
565 566 1.476488 GTTTAGTTTCCCGCATGGCAT 59.524 47.619 0.00 0.00 0.00 4.40
566 567 1.102154 TTAGTTTCCCGCATGGCATG 58.898 50.000 22.99 22.99 0.00 4.06
567 568 0.034574 TAGTTTCCCGCATGGCATGT 60.035 50.000 26.94 8.60 0.00 3.21
568 569 0.899717 AGTTTCCCGCATGGCATGTT 60.900 50.000 26.94 0.00 0.00 2.71
569 570 0.037419 GTTTCCCGCATGGCATGTTT 60.037 50.000 26.94 0.00 0.00 2.83
570 571 0.246086 TTTCCCGCATGGCATGTTTC 59.754 50.000 26.94 10.99 0.00 2.78
571 572 0.611618 TTCCCGCATGGCATGTTTCT 60.612 50.000 26.94 0.00 0.00 2.52
572 573 0.611618 TCCCGCATGGCATGTTTCTT 60.612 50.000 26.94 0.00 0.00 2.52
573 574 0.247185 CCCGCATGGCATGTTTCTTT 59.753 50.000 26.94 0.00 0.00 2.52
574 575 1.338011 CCCGCATGGCATGTTTCTTTT 60.338 47.619 26.94 0.00 0.00 2.27
575 576 1.994779 CCGCATGGCATGTTTCTTTTC 59.005 47.619 26.94 8.19 0.00 2.29
576 577 2.609984 CCGCATGGCATGTTTCTTTTCA 60.610 45.455 26.94 0.00 0.00 2.69
577 578 3.255725 CGCATGGCATGTTTCTTTTCAT 58.744 40.909 26.94 0.00 0.00 2.57
578 579 3.305094 CGCATGGCATGTTTCTTTTCATC 59.695 43.478 26.94 6.33 0.00 2.92
579 580 4.247258 GCATGGCATGTTTCTTTTCATCA 58.753 39.130 26.94 0.00 0.00 3.07
580 581 4.691685 GCATGGCATGTTTCTTTTCATCAA 59.308 37.500 26.94 0.00 0.00 2.57
581 582 5.353123 GCATGGCATGTTTCTTTTCATCAAT 59.647 36.000 26.94 0.00 0.00 2.57
582 583 6.456449 GCATGGCATGTTTCTTTTCATCAATC 60.456 38.462 26.94 2.02 0.00 2.67
583 584 5.162794 TGGCATGTTTCTTTTCATCAATCG 58.837 37.500 0.00 0.00 0.00 3.34
584 585 5.048154 TGGCATGTTTCTTTTCATCAATCGA 60.048 36.000 0.00 0.00 0.00 3.59
585 586 6.038356 GGCATGTTTCTTTTCATCAATCGAT 58.962 36.000 0.00 0.00 0.00 3.59
586 587 6.197842 GGCATGTTTCTTTTCATCAATCGATC 59.802 38.462 0.00 0.00 0.00 3.69
587 588 6.748658 GCATGTTTCTTTTCATCAATCGATCA 59.251 34.615 0.00 0.00 0.00 2.92
588 589 7.044249 GCATGTTTCTTTTCATCAATCGATCAG 60.044 37.037 0.00 0.00 0.00 2.90
589 590 7.671495 TGTTTCTTTTCATCAATCGATCAGA 57.329 32.000 0.00 0.00 0.00 3.27
590 591 8.272545 TGTTTCTTTTCATCAATCGATCAGAT 57.727 30.769 0.00 2.74 42.43 2.90
592 593 9.219497 GTTTCTTTTCATCAATCGATCAGATTC 57.781 33.333 0.00 0.00 45.95 2.52
593 594 8.496707 TTCTTTTCATCAATCGATCAGATTCA 57.503 30.769 0.00 0.00 45.95 2.57
594 595 8.496707 TCTTTTCATCAATCGATCAGATTCAA 57.503 30.769 0.00 0.00 45.95 2.69
595 596 8.393366 TCTTTTCATCAATCGATCAGATTCAAC 58.607 33.333 0.00 0.00 45.95 3.18
596 597 7.614124 TTTCATCAATCGATCAGATTCAACA 57.386 32.000 0.00 0.00 45.95 3.33
597 598 6.594284 TCATCAATCGATCAGATTCAACAC 57.406 37.500 0.00 0.00 45.95 3.32
598 599 6.343703 TCATCAATCGATCAGATTCAACACT 58.656 36.000 0.00 0.00 45.95 3.55
599 600 6.257193 TCATCAATCGATCAGATTCAACACTG 59.743 38.462 0.00 0.00 45.95 3.66
600 601 5.482006 TCAATCGATCAGATTCAACACTGT 58.518 37.500 0.00 0.00 45.95 3.55
601 602 5.934043 TCAATCGATCAGATTCAACACTGTT 59.066 36.000 0.00 0.00 45.95 3.16
602 603 5.791367 ATCGATCAGATTCAACACTGTTG 57.209 39.130 14.79 14.79 35.73 3.33
603 604 3.996363 TCGATCAGATTCAACACTGTTGG 59.004 43.478 19.60 5.61 35.84 3.77
604 605 3.425359 CGATCAGATTCAACACTGTTGGC 60.425 47.826 19.60 10.83 35.84 4.52
605 606 2.229792 TCAGATTCAACACTGTTGGCC 58.770 47.619 19.60 0.00 35.84 5.36
606 607 1.955778 CAGATTCAACACTGTTGGCCA 59.044 47.619 19.60 0.00 0.00 5.36
608 609 2.158623 AGATTCAACACTGTTGGCCAGA 60.159 45.455 19.60 0.00 44.49 3.86
609 610 1.679139 TTCAACACTGTTGGCCAGAG 58.321 50.000 19.60 9.05 44.49 3.35
610 611 0.546122 TCAACACTGTTGGCCAGAGT 59.454 50.000 19.60 9.79 45.45 3.24
611 612 3.903208 AACACTGTTGGCCAGAGTT 57.097 47.368 15.18 8.33 46.16 3.01
612 613 3.100545 ACACTGTTGGCCAGAGTTG 57.899 52.632 15.18 10.14 41.50 3.16
613 614 1.103398 ACACTGTTGGCCAGAGTTGC 61.103 55.000 15.18 0.67 41.50 4.17
614 615 1.893808 ACTGTTGGCCAGAGTTGCG 60.894 57.895 5.11 0.00 44.49 4.85
615 616 3.259425 CTGTTGGCCAGAGTTGCGC 62.259 63.158 5.11 0.00 44.49 6.09
616 617 4.043200 GTTGGCCAGAGTTGCGCC 62.043 66.667 5.11 0.00 39.61 6.53
617 618 4.269523 TTGGCCAGAGTTGCGCCT 62.270 61.111 5.11 0.00 39.77 5.52
618 619 2.889606 TTGGCCAGAGTTGCGCCTA 61.890 57.895 5.11 0.00 39.77 3.93
619 620 2.046314 GGCCAGAGTTGCGCCTAA 60.046 61.111 4.18 0.00 37.55 2.69
620 621 1.452108 GGCCAGAGTTGCGCCTAAT 60.452 57.895 4.18 0.00 37.55 1.73
621 622 1.032114 GGCCAGAGTTGCGCCTAATT 61.032 55.000 4.18 0.00 37.55 1.40
622 623 0.378610 GCCAGAGTTGCGCCTAATTC 59.621 55.000 4.18 0.00 0.00 2.17
623 624 1.737838 CCAGAGTTGCGCCTAATTCA 58.262 50.000 4.18 0.00 0.00 2.57
624 625 2.292267 CCAGAGTTGCGCCTAATTCAT 58.708 47.619 4.18 0.00 0.00 2.57
625 626 3.466836 CCAGAGTTGCGCCTAATTCATA 58.533 45.455 4.18 0.00 0.00 2.15
626 627 3.248602 CCAGAGTTGCGCCTAATTCATAC 59.751 47.826 4.18 0.00 0.00 2.39
627 628 4.122776 CAGAGTTGCGCCTAATTCATACT 58.877 43.478 4.18 0.00 0.00 2.12
628 629 4.025396 CAGAGTTGCGCCTAATTCATACTG 60.025 45.833 4.18 0.00 0.00 2.74
629 630 4.119862 GAGTTGCGCCTAATTCATACTGA 58.880 43.478 4.18 0.00 0.00 3.41
630 631 4.708177 AGTTGCGCCTAATTCATACTGAT 58.292 39.130 4.18 0.00 0.00 2.90
631 632 4.512944 AGTTGCGCCTAATTCATACTGATG 59.487 41.667 4.18 0.00 0.00 3.07
632 633 4.071961 TGCGCCTAATTCATACTGATGT 57.928 40.909 4.18 0.00 34.41 3.06
633 634 4.450976 TGCGCCTAATTCATACTGATGTT 58.549 39.130 4.18 0.00 34.41 2.71
634 635 5.606505 TGCGCCTAATTCATACTGATGTTA 58.393 37.500 4.18 0.00 34.41 2.41
635 636 6.052360 TGCGCCTAATTCATACTGATGTTAA 58.948 36.000 4.18 0.00 34.41 2.01
636 637 6.202762 TGCGCCTAATTCATACTGATGTTAAG 59.797 38.462 4.18 0.00 34.41 1.85
637 638 6.347725 GCGCCTAATTCATACTGATGTTAAGG 60.348 42.308 0.00 0.00 34.41 2.69
638 639 6.929049 CGCCTAATTCATACTGATGTTAAGGA 59.071 38.462 0.00 0.00 34.41 3.36
639 640 7.604164 CGCCTAATTCATACTGATGTTAAGGAT 59.396 37.037 0.00 0.00 34.41 3.24
640 641 8.725148 GCCTAATTCATACTGATGTTAAGGATG 58.275 37.037 0.00 0.00 37.33 3.51
649 650 9.911788 ATACTGATGTTAAGGATGAATCTTTGT 57.088 29.630 0.00 0.00 0.00 2.83
650 651 8.641498 ACTGATGTTAAGGATGAATCTTTGTT 57.359 30.769 0.00 0.00 0.00 2.83
651 652 9.082313 ACTGATGTTAAGGATGAATCTTTGTTT 57.918 29.630 0.00 0.00 0.00 2.83
652 653 9.918630 CTGATGTTAAGGATGAATCTTTGTTTT 57.081 29.630 0.00 0.00 0.00 2.43
653 654 9.912634 TGATGTTAAGGATGAATCTTTGTTTTC 57.087 29.630 0.00 0.00 0.00 2.29
661 662 9.981460 AGGATGAATCTTTGTTTTCTAATAGGT 57.019 29.630 0.00 0.00 0.00 3.08
668 669 8.833231 TCTTTGTTTTCTAATAGGTCAGACTG 57.167 34.615 0.00 0.00 0.00 3.51
669 670 7.878127 TCTTTGTTTTCTAATAGGTCAGACTGG 59.122 37.037 1.81 0.00 0.00 4.00
670 671 6.928348 TGTTTTCTAATAGGTCAGACTGGA 57.072 37.500 1.81 0.00 0.00 3.86
671 672 7.496346 TGTTTTCTAATAGGTCAGACTGGAT 57.504 36.000 1.81 0.00 0.00 3.41
672 673 7.918076 TGTTTTCTAATAGGTCAGACTGGATT 58.082 34.615 1.81 1.08 0.00 3.01
673 674 8.041323 TGTTTTCTAATAGGTCAGACTGGATTC 58.959 37.037 1.81 0.00 0.00 2.52
674 675 7.979786 TTTCTAATAGGTCAGACTGGATTCT 57.020 36.000 1.81 0.00 0.00 2.40
675 676 9.488762 TTTTCTAATAGGTCAGACTGGATTCTA 57.511 33.333 1.81 0.80 0.00 2.10
823 825 6.867816 TGACTAGCGATTTAACCGTTTTTCTA 59.132 34.615 0.00 0.00 0.00 2.10
897 899 1.069378 GTTCACGACCGTTAGCCGAG 61.069 60.000 0.00 0.00 39.56 4.63
974 978 0.242286 GCTCACTCTCTCGTTGCTCA 59.758 55.000 0.00 0.00 0.00 4.26
1084 1088 0.400213 AATGCCTTCCTGGAACGACA 59.600 50.000 4.68 4.48 38.35 4.35
1115 1119 2.363147 GGAGGAGGAGTGCGAGGT 60.363 66.667 0.00 0.00 0.00 3.85
1587 1990 7.234577 TCCAGGTTAGATGCCAATTAAGTTTTT 59.765 33.333 0.00 0.00 0.00 1.94
1728 2202 9.139174 CATTTACAAATGTAGGAAAATGGTGTC 57.861 33.333 6.53 0.00 40.61 3.67
1973 3093 6.381481 TGATGATGTATCCAAGATGTTTGC 57.619 37.500 0.00 0.00 34.77 3.68
2311 3572 3.754965 ACTTGCTGTGATATGTTGGTGT 58.245 40.909 0.00 0.00 0.00 4.16
2354 3615 5.222130 CCTTTATATAAGGATGTGGCCTGGT 60.222 44.000 3.32 0.00 39.81 4.00
2419 3713 7.924412 TGTGAAGTTTAACCTAGTGTGTAAGAG 59.076 37.037 0.00 0.00 0.00 2.85
2608 3961 2.025699 GTGGGTAATTGGGCTTAGTGGA 60.026 50.000 0.00 0.00 0.00 4.02
2737 4104 1.112916 CCGCCACCCAAAAGAAACCT 61.113 55.000 0.00 0.00 0.00 3.50
2816 4213 4.086178 GACAGCAGCAGCAGCACG 62.086 66.667 12.92 5.15 45.49 5.34
2817 4220 4.614112 ACAGCAGCAGCAGCACGA 62.614 61.111 12.92 0.00 45.49 4.35
3332 4880 4.053295 CAAACCAAATCAAAGAGTGCAGG 58.947 43.478 0.00 0.00 0.00 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.484173 ACATATTGGTTGCACGTCATTAG 57.516 39.130 0.00 0.00 0.00 1.73
1 2 4.033472 CGACATATTGGTTGCACGTCATTA 59.967 41.667 0.00 0.00 0.00 1.90
2 3 3.181511 CGACATATTGGTTGCACGTCATT 60.182 43.478 0.00 0.00 0.00 2.57
3 4 2.351418 CGACATATTGGTTGCACGTCAT 59.649 45.455 0.00 0.00 0.00 3.06
4 5 1.729517 CGACATATTGGTTGCACGTCA 59.270 47.619 0.00 0.00 0.00 4.35
5 6 1.062002 CCGACATATTGGTTGCACGTC 59.938 52.381 0.00 0.00 0.00 4.34
6 7 1.083489 CCGACATATTGGTTGCACGT 58.917 50.000 0.00 0.00 0.00 4.49
7 8 1.083489 ACCGACATATTGGTTGCACG 58.917 50.000 0.00 0.00 40.00 5.34
8 9 2.080693 TCACCGACATATTGGTTGCAC 58.919 47.619 0.00 0.00 40.00 4.57
9 10 2.481289 TCACCGACATATTGGTTGCA 57.519 45.000 0.00 0.00 40.00 4.08
10 11 3.190535 AGTTTCACCGACATATTGGTTGC 59.809 43.478 0.00 0.00 40.00 4.17
11 12 4.379394 CCAGTTTCACCGACATATTGGTTG 60.379 45.833 0.00 0.00 40.00 3.77
12 13 3.756434 CCAGTTTCACCGACATATTGGTT 59.244 43.478 0.00 0.00 40.00 3.67
13 14 3.343617 CCAGTTTCACCGACATATTGGT 58.656 45.455 0.00 0.00 44.35 3.67
14 15 2.682856 CCCAGTTTCACCGACATATTGG 59.317 50.000 0.00 0.00 35.11 3.16
15 16 2.682856 CCCCAGTTTCACCGACATATTG 59.317 50.000 0.00 0.00 0.00 1.90
16 17 2.944094 GCCCCAGTTTCACCGACATATT 60.944 50.000 0.00 0.00 0.00 1.28
17 18 1.408266 GCCCCAGTTTCACCGACATAT 60.408 52.381 0.00 0.00 0.00 1.78
63 64 9.450807 GCCAAACTATGAAATCATATGTGTAAC 57.549 33.333 1.90 0.00 38.09 2.50
64 65 9.183368 TGCCAAACTATGAAATCATATGTGTAA 57.817 29.630 1.90 0.00 38.09 2.41
65 66 8.744568 TGCCAAACTATGAAATCATATGTGTA 57.255 30.769 1.90 0.00 38.09 2.90
66 67 7.643569 TGCCAAACTATGAAATCATATGTGT 57.356 32.000 1.90 0.00 38.09 3.72
67 68 8.192774 ACTTGCCAAACTATGAAATCATATGTG 58.807 33.333 1.90 3.37 38.09 3.21
68 69 8.297470 ACTTGCCAAACTATGAAATCATATGT 57.703 30.769 1.90 2.68 38.09 2.29
71 72 9.625747 TGATACTTGCCAAACTATGAAATCATA 57.374 29.630 3.29 3.29 37.76 2.15
72 73 8.408601 GTGATACTTGCCAAACTATGAAATCAT 58.591 33.333 1.01 1.01 40.22 2.45
73 74 7.392953 TGTGATACTTGCCAAACTATGAAATCA 59.607 33.333 0.00 0.00 0.00 2.57
74 75 7.761409 TGTGATACTTGCCAAACTATGAAATC 58.239 34.615 0.00 0.00 0.00 2.17
75 76 7.611467 TCTGTGATACTTGCCAAACTATGAAAT 59.389 33.333 0.00 0.00 0.00 2.17
76 77 6.939730 TCTGTGATACTTGCCAAACTATGAAA 59.060 34.615 0.00 0.00 0.00 2.69
77 78 6.472016 TCTGTGATACTTGCCAAACTATGAA 58.528 36.000 0.00 0.00 0.00 2.57
78 79 6.048732 TCTGTGATACTTGCCAAACTATGA 57.951 37.500 0.00 0.00 0.00 2.15
79 80 6.741992 TTCTGTGATACTTGCCAAACTATG 57.258 37.500 0.00 0.00 0.00 2.23
80 81 7.944729 AATTCTGTGATACTTGCCAAACTAT 57.055 32.000 0.00 0.00 0.00 2.12
81 82 7.230510 ACAAATTCTGTGATACTTGCCAAACTA 59.769 33.333 0.00 0.00 36.69 2.24
82 83 6.040842 ACAAATTCTGTGATACTTGCCAAACT 59.959 34.615 0.00 0.00 36.69 2.66
83 84 6.215845 ACAAATTCTGTGATACTTGCCAAAC 58.784 36.000 0.00 0.00 36.69 2.93
84 85 6.403866 ACAAATTCTGTGATACTTGCCAAA 57.596 33.333 0.00 0.00 36.69 3.28
97 98 9.959721 ATATAAGTACTCAACCACAAATTCTGT 57.040 29.630 0.00 0.00 39.56 3.41
99 100 9.614792 GGATATAAGTACTCAACCACAAATTCT 57.385 33.333 0.00 0.00 0.00 2.40
100 101 9.391006 TGGATATAAGTACTCAACCACAAATTC 57.609 33.333 0.00 0.00 0.00 2.17
101 102 9.747898 TTGGATATAAGTACTCAACCACAAATT 57.252 29.630 0.00 0.00 0.00 1.82
102 103 9.747898 TTTGGATATAAGTACTCAACCACAAAT 57.252 29.630 0.00 0.00 0.00 2.32
103 104 9.575868 TTTTGGATATAAGTACTCAACCACAAA 57.424 29.630 0.00 2.49 0.00 2.83
104 105 9.747898 ATTTTGGATATAAGTACTCAACCACAA 57.252 29.630 0.00 2.74 0.00 3.33
105 106 9.391006 GATTTTGGATATAAGTACTCAACCACA 57.609 33.333 0.00 0.00 0.00 4.17
106 107 9.391006 TGATTTTGGATATAAGTACTCAACCAC 57.609 33.333 0.00 0.00 0.00 4.16
111 112 9.476202 CACGATGATTTTGGATATAAGTACTCA 57.524 33.333 0.00 0.00 0.00 3.41
112 113 9.477484 ACACGATGATTTTGGATATAAGTACTC 57.523 33.333 0.00 0.00 0.00 2.59
113 114 9.832445 AACACGATGATTTTGGATATAAGTACT 57.168 29.630 0.00 0.00 0.00 2.73
116 117 8.774586 GCTAACACGATGATTTTGGATATAAGT 58.225 33.333 0.00 0.00 0.00 2.24
117 118 8.773645 TGCTAACACGATGATTTTGGATATAAG 58.226 33.333 0.00 0.00 0.00 1.73
118 119 8.556194 GTGCTAACACGATGATTTTGGATATAA 58.444 33.333 0.00 0.00 36.98 0.98
119 120 8.083462 GTGCTAACACGATGATTTTGGATATA 57.917 34.615 0.00 0.00 36.98 0.86
120 121 6.959361 GTGCTAACACGATGATTTTGGATAT 58.041 36.000 0.00 0.00 36.98 1.63
121 122 6.358118 GTGCTAACACGATGATTTTGGATA 57.642 37.500 0.00 0.00 36.98 2.59
122 123 5.235305 GTGCTAACACGATGATTTTGGAT 57.765 39.130 0.00 0.00 36.98 3.41
123 124 4.678509 GTGCTAACACGATGATTTTGGA 57.321 40.909 0.00 0.00 36.98 3.53
136 137 9.938280 ATACATAAAGTAACTTCAGTGCTAACA 57.062 29.630 0.00 0.00 36.05 2.41
139 140 9.938280 ACAATACATAAAGTAACTTCAGTGCTA 57.062 29.630 0.00 0.00 36.05 3.49
140 141 8.848474 ACAATACATAAAGTAACTTCAGTGCT 57.152 30.769 0.00 0.00 36.05 4.40
172 173 2.924880 GCACGGGAAACATTAAGGCAAC 60.925 50.000 0.00 0.00 0.00 4.17
173 174 1.271102 GCACGGGAAACATTAAGGCAA 59.729 47.619 0.00 0.00 0.00 4.52
174 175 0.885196 GCACGGGAAACATTAAGGCA 59.115 50.000 0.00 0.00 0.00 4.75
175 176 1.173913 AGCACGGGAAACATTAAGGC 58.826 50.000 0.00 0.00 0.00 4.35
176 177 4.196193 TGATAGCACGGGAAACATTAAGG 58.804 43.478 0.00 0.00 0.00 2.69
177 178 5.584649 TCTTGATAGCACGGGAAACATTAAG 59.415 40.000 0.00 0.00 0.00 1.85
178 179 5.492895 TCTTGATAGCACGGGAAACATTAA 58.507 37.500 0.00 0.00 0.00 1.40
179 180 5.092554 TCTTGATAGCACGGGAAACATTA 57.907 39.130 0.00 0.00 0.00 1.90
180 181 3.950397 TCTTGATAGCACGGGAAACATT 58.050 40.909 0.00 0.00 0.00 2.71
181 182 3.627395 TCTTGATAGCACGGGAAACAT 57.373 42.857 0.00 0.00 0.00 2.71
182 183 3.531538 GATCTTGATAGCACGGGAAACA 58.468 45.455 0.00 0.00 0.00 2.83
183 184 2.872858 GGATCTTGATAGCACGGGAAAC 59.127 50.000 0.00 0.00 0.00 2.78
184 185 2.503765 TGGATCTTGATAGCACGGGAAA 59.496 45.455 0.00 0.00 0.00 3.13
185 186 2.115427 TGGATCTTGATAGCACGGGAA 58.885 47.619 0.00 0.00 0.00 3.97
186 187 1.788229 TGGATCTTGATAGCACGGGA 58.212 50.000 0.00 0.00 0.00 5.14
187 188 2.301296 AGATGGATCTTGATAGCACGGG 59.699 50.000 0.00 0.00 31.97 5.28
188 189 3.674528 AGATGGATCTTGATAGCACGG 57.325 47.619 0.00 0.00 31.97 4.94
189 190 5.718146 ACATAGATGGATCTTGATAGCACG 58.282 41.667 0.00 0.00 38.32 5.34
190 191 7.385267 AGAACATAGATGGATCTTGATAGCAC 58.615 38.462 0.00 0.00 38.32 4.40
191 192 7.550597 AGAACATAGATGGATCTTGATAGCA 57.449 36.000 0.00 0.00 38.32 3.49
219 220 9.796120 CTTTAGCGATTTTGGATGGTTATAAAA 57.204 29.630 0.00 0.00 0.00 1.52
220 221 7.918562 GCTTTAGCGATTTTGGATGGTTATAAA 59.081 33.333 0.00 0.00 0.00 1.40
221 222 7.422399 GCTTTAGCGATTTTGGATGGTTATAA 58.578 34.615 0.00 0.00 0.00 0.98
222 223 6.966021 GCTTTAGCGATTTTGGATGGTTATA 58.034 36.000 0.00 0.00 0.00 0.98
223 224 5.831997 GCTTTAGCGATTTTGGATGGTTAT 58.168 37.500 0.00 0.00 0.00 1.89
224 225 5.243426 GCTTTAGCGATTTTGGATGGTTA 57.757 39.130 0.00 0.00 0.00 2.85
225 226 4.110036 GCTTTAGCGATTTTGGATGGTT 57.890 40.909 0.00 0.00 0.00 3.67
226 227 3.782889 GCTTTAGCGATTTTGGATGGT 57.217 42.857 0.00 0.00 0.00 3.55
235 236 5.999941 TTGGACTGCCAGCTTTAGCGATT 63.000 47.826 0.00 0.00 46.91 3.34
236 237 4.580356 TTGGACTGCCAGCTTTAGCGAT 62.580 50.000 0.00 0.00 46.91 4.58
237 238 3.318987 TTGGACTGCCAGCTTTAGCGA 62.319 52.381 0.00 0.00 46.91 4.93
238 239 0.955428 TTGGACTGCCAGCTTTAGCG 60.955 55.000 0.00 0.00 46.91 4.26
239 240 1.068264 GTTTGGACTGCCAGCTTTAGC 60.068 52.381 0.00 0.00 46.91 3.09
240 241 2.229792 TGTTTGGACTGCCAGCTTTAG 58.770 47.619 0.00 0.00 46.91 1.85
241 242 2.356665 TGTTTGGACTGCCAGCTTTA 57.643 45.000 0.00 0.00 46.91 1.85
242 243 1.484038 TTGTTTGGACTGCCAGCTTT 58.516 45.000 0.00 0.00 46.91 3.51
243 244 1.484038 TTTGTTTGGACTGCCAGCTT 58.516 45.000 0.00 0.00 46.91 3.74
244 245 1.708341 ATTTGTTTGGACTGCCAGCT 58.292 45.000 0.00 0.00 46.91 4.24
245 246 2.137523 CAATTTGTTTGGACTGCCAGC 58.862 47.619 0.00 0.00 46.91 4.85
246 247 3.125316 CACAATTTGTTTGGACTGCCAG 58.875 45.455 0.00 0.00 46.91 4.85
247 248 2.762887 TCACAATTTGTTTGGACTGCCA 59.237 40.909 0.00 0.00 44.17 4.92
248 249 3.123050 GTCACAATTTGTTTGGACTGCC 58.877 45.455 0.00 0.00 39.80 4.85
249 250 3.779759 TGTCACAATTTGTTTGGACTGC 58.220 40.909 15.43 0.00 39.80 4.40
250 251 5.350633 ACATGTCACAATTTGTTTGGACTG 58.649 37.500 15.43 13.36 39.80 3.51
251 252 5.126869 TGACATGTCACAATTTGTTTGGACT 59.873 36.000 24.56 1.33 39.80 3.85
252 253 5.347342 TGACATGTCACAATTTGTTTGGAC 58.653 37.500 24.56 5.54 39.80 4.02
253 254 5.588958 TGACATGTCACAATTTGTTTGGA 57.411 34.783 24.56 0.00 39.80 3.53
254 255 5.754406 ACATGACATGTCACAATTTGTTTGG 59.246 36.000 30.09 10.25 43.11 3.28
255 256 6.831727 ACATGACATGTCACAATTTGTTTG 57.168 33.333 30.09 21.57 43.11 2.93
256 257 7.548427 TCAAACATGACATGTCACAATTTGTTT 59.452 29.630 32.32 32.32 43.09 2.83
257 258 7.040494 TCAAACATGACATGTCACAATTTGTT 58.960 30.769 33.52 30.84 44.07 2.83
258 259 6.571605 TCAAACATGACATGTCACAATTTGT 58.428 32.000 33.52 28.47 44.07 2.83
259 260 7.382759 TGATCAAACATGACATGTCACAATTTG 59.617 33.333 31.83 31.83 44.07 2.32
260 261 7.435305 TGATCAAACATGACATGTCACAATTT 58.565 30.769 30.09 24.13 44.07 1.82
261 262 6.983984 TGATCAAACATGACATGTCACAATT 58.016 32.000 30.09 20.24 44.07 2.32
262 263 6.578163 TGATCAAACATGACATGTCACAAT 57.422 33.333 30.09 15.66 44.07 2.71
263 264 6.388435 TTGATCAAACATGACATGTCACAA 57.612 33.333 30.09 21.88 44.07 3.33
264 265 6.388435 TTTGATCAAACATGACATGTCACA 57.612 33.333 30.09 17.57 44.07 3.58
265 266 7.878477 AATTTGATCAAACATGACATGTCAC 57.122 32.000 30.09 15.22 44.07 3.67
293 294 8.397906 CCACAAATGTGTAATCAGAATAACGAT 58.602 33.333 12.21 0.00 44.21 3.73
294 295 7.389330 ACCACAAATGTGTAATCAGAATAACGA 59.611 33.333 12.21 0.00 44.21 3.85
295 296 7.481483 CACCACAAATGTGTAATCAGAATAACG 59.519 37.037 12.21 0.00 44.21 3.18
296 297 8.511321 TCACCACAAATGTGTAATCAGAATAAC 58.489 33.333 12.21 0.00 44.21 1.89
297 298 8.628630 TCACCACAAATGTGTAATCAGAATAA 57.371 30.769 12.21 0.00 44.21 1.40
298 299 8.806429 ATCACCACAAATGTGTAATCAGAATA 57.194 30.769 12.21 0.00 44.21 1.75
299 300 7.707624 ATCACCACAAATGTGTAATCAGAAT 57.292 32.000 12.21 0.00 44.21 2.40
300 301 8.628630 TTATCACCACAAATGTGTAATCAGAA 57.371 30.769 12.21 0.00 44.21 3.02
301 302 8.806429 ATTATCACCACAAATGTGTAATCAGA 57.194 30.769 12.21 2.19 44.21 3.27
302 303 7.852454 CGATTATCACCACAAATGTGTAATCAG 59.148 37.037 21.67 15.33 44.21 2.90
303 304 7.335673 ACGATTATCACCACAAATGTGTAATCA 59.664 33.333 21.67 6.18 44.21 2.57
304 305 7.693952 ACGATTATCACCACAAATGTGTAATC 58.306 34.615 16.73 16.73 44.21 1.75
305 306 7.624360 ACGATTATCACCACAAATGTGTAAT 57.376 32.000 12.21 9.14 44.21 1.89
306 307 7.820386 ACTACGATTATCACCACAAATGTGTAA 59.180 33.333 12.21 5.11 44.21 2.41
307 308 7.276878 CACTACGATTATCACCACAAATGTGTA 59.723 37.037 12.21 0.00 44.21 2.90
308 309 6.092122 CACTACGATTATCACCACAAATGTGT 59.908 38.462 12.21 0.00 44.21 3.72
309 310 6.456853 CCACTACGATTATCACCACAAATGTG 60.457 42.308 6.57 6.57 45.23 3.21
310 311 5.584649 CCACTACGATTATCACCACAAATGT 59.415 40.000 0.00 0.00 0.00 2.71
311 312 5.815222 TCCACTACGATTATCACCACAAATG 59.185 40.000 0.00 0.00 0.00 2.32
312 313 5.984725 TCCACTACGATTATCACCACAAAT 58.015 37.500 0.00 0.00 0.00 2.32
313 314 5.046878 ACTCCACTACGATTATCACCACAAA 60.047 40.000 0.00 0.00 0.00 2.83
314 315 4.464951 ACTCCACTACGATTATCACCACAA 59.535 41.667 0.00 0.00 0.00 3.33
315 316 4.021229 ACTCCACTACGATTATCACCACA 58.979 43.478 0.00 0.00 0.00 4.17
316 317 4.650754 ACTCCACTACGATTATCACCAC 57.349 45.455 0.00 0.00 0.00 4.16
317 318 6.778834 TTTACTCCACTACGATTATCACCA 57.221 37.500 0.00 0.00 0.00 4.17
318 319 7.546667 TGTTTTTACTCCACTACGATTATCACC 59.453 37.037 0.00 0.00 0.00 4.02
319 320 8.378421 GTGTTTTTACTCCACTACGATTATCAC 58.622 37.037 0.00 0.00 0.00 3.06
320 321 8.089597 TGTGTTTTTACTCCACTACGATTATCA 58.910 33.333 0.00 0.00 0.00 2.15
321 322 8.470040 TGTGTTTTTACTCCACTACGATTATC 57.530 34.615 0.00 0.00 0.00 1.75
322 323 9.444600 AATGTGTTTTTACTCCACTACGATTAT 57.555 29.630 0.00 0.00 0.00 1.28
323 324 8.836268 AATGTGTTTTTACTCCACTACGATTA 57.164 30.769 0.00 0.00 0.00 1.75
324 325 7.739498 AATGTGTTTTTACTCCACTACGATT 57.261 32.000 0.00 0.00 0.00 3.34
325 326 7.739498 AAATGTGTTTTTACTCCACTACGAT 57.261 32.000 0.00 0.00 0.00 3.73
326 327 7.556733 AAAATGTGTTTTTACTCCACTACGA 57.443 32.000 0.00 0.00 35.75 3.43
327 328 7.911205 TGAAAAATGTGTTTTTACTCCACTACG 59.089 33.333 0.00 0.00 45.08 3.51
328 329 9.233232 CTGAAAAATGTGTTTTTACTCCACTAC 57.767 33.333 0.00 0.00 45.08 2.73
329 330 8.962679 ACTGAAAAATGTGTTTTTACTCCACTA 58.037 29.630 0.00 0.00 45.08 2.74
330 331 7.836842 ACTGAAAAATGTGTTTTTACTCCACT 58.163 30.769 0.00 0.00 45.08 4.00
331 332 8.379902 CAACTGAAAAATGTGTTTTTACTCCAC 58.620 33.333 0.00 0.00 45.08 4.02
332 333 7.547370 CCAACTGAAAAATGTGTTTTTACTCCA 59.453 33.333 0.00 0.00 45.08 3.86
333 334 7.762159 TCCAACTGAAAAATGTGTTTTTACTCC 59.238 33.333 0.00 0.00 45.08 3.85
334 335 8.696410 TCCAACTGAAAAATGTGTTTTTACTC 57.304 30.769 0.00 0.00 45.08 2.59
335 336 9.097257 CATCCAACTGAAAAATGTGTTTTTACT 57.903 29.630 0.00 0.00 45.08 2.24
336 337 8.878769 ACATCCAACTGAAAAATGTGTTTTTAC 58.121 29.630 0.00 0.00 45.08 2.01
337 338 9.442047 AACATCCAACTGAAAAATGTGTTTTTA 57.558 25.926 0.00 0.00 45.08 1.52
339 340 7.920160 AACATCCAACTGAAAAATGTGTTTT 57.080 28.000 0.00 0.00 39.15 2.43
340 341 7.065683 GGAAACATCCAACTGAAAAATGTGTTT 59.934 33.333 0.00 0.00 39.22 2.83
341 342 6.538381 GGAAACATCCAACTGAAAAATGTGTT 59.462 34.615 0.00 0.00 31.29 3.32
342 343 6.048509 GGAAACATCCAACTGAAAAATGTGT 58.951 36.000 0.00 0.00 31.29 3.72
343 344 6.047870 TGGAAACATCCAACTGAAAAATGTG 58.952 36.000 0.00 0.00 36.74 3.21
344 345 6.232581 TGGAAACATCCAACTGAAAAATGT 57.767 33.333 0.00 0.00 36.74 2.71
366 367 9.236691 GCATGTGAATAATGTAAAACCAGTATG 57.763 33.333 0.00 0.00 0.00 2.39
367 368 8.413229 GGCATGTGAATAATGTAAAACCAGTAT 58.587 33.333 0.00 0.00 0.00 2.12
368 369 7.394641 TGGCATGTGAATAATGTAAAACCAGTA 59.605 33.333 0.00 0.00 0.00 2.74
369 370 6.210385 TGGCATGTGAATAATGTAAAACCAGT 59.790 34.615 0.00 0.00 0.00 4.00
370 371 6.629128 TGGCATGTGAATAATGTAAAACCAG 58.371 36.000 0.00 0.00 0.00 4.00
371 372 6.596309 TGGCATGTGAATAATGTAAAACCA 57.404 33.333 0.00 0.00 0.00 3.67
372 373 7.224557 GGATTGGCATGTGAATAATGTAAAACC 59.775 37.037 0.00 0.00 0.00 3.27
373 374 7.763528 TGGATTGGCATGTGAATAATGTAAAAC 59.236 33.333 0.00 0.00 0.00 2.43
374 375 7.845037 TGGATTGGCATGTGAATAATGTAAAA 58.155 30.769 0.00 0.00 0.00 1.52
375 376 7.415592 TGGATTGGCATGTGAATAATGTAAA 57.584 32.000 0.00 0.00 0.00 2.01
376 377 7.069702 ACATGGATTGGCATGTGAATAATGTAA 59.930 33.333 0.00 0.00 40.16 2.41
377 378 6.550481 ACATGGATTGGCATGTGAATAATGTA 59.450 34.615 0.00 0.00 40.16 2.29
378 379 5.364446 ACATGGATTGGCATGTGAATAATGT 59.636 36.000 0.00 4.67 40.16 2.71
379 380 5.849510 ACATGGATTGGCATGTGAATAATG 58.150 37.500 0.00 4.13 40.16 1.90
387 388 3.579586 AGAAAACACATGGATTGGCATGT 59.420 39.130 0.00 0.00 42.12 3.21
388 389 3.930229 CAGAAAACACATGGATTGGCATG 59.070 43.478 0.00 0.00 35.13 4.06
389 390 3.579586 ACAGAAAACACATGGATTGGCAT 59.420 39.130 0.00 0.00 0.00 4.40
390 391 2.964464 ACAGAAAACACATGGATTGGCA 59.036 40.909 0.00 0.00 0.00 4.92
391 392 3.665745 ACAGAAAACACATGGATTGGC 57.334 42.857 0.00 0.00 0.00 4.52
392 393 8.606040 ATTAAAACAGAAAACACATGGATTGG 57.394 30.769 0.00 0.00 0.00 3.16
395 396 9.912634 CACTATTAAAACAGAAAACACATGGAT 57.087 29.630 0.00 0.00 0.00 3.41
396 397 8.908903 ACACTATTAAAACAGAAAACACATGGA 58.091 29.630 0.00 0.00 0.00 3.41
397 398 9.180678 GACACTATTAAAACAGAAAACACATGG 57.819 33.333 0.00 0.00 0.00 3.66
398 399 9.729023 TGACACTATTAAAACAGAAAACACATG 57.271 29.630 0.00 0.00 0.00 3.21
417 418 9.082313 TGAGCTTCATCTATCATAATGACACTA 57.918 33.333 0.00 0.00 31.83 2.74
418 419 7.960262 TGAGCTTCATCTATCATAATGACACT 58.040 34.615 0.00 0.00 31.83 3.55
419 420 8.657729 CATGAGCTTCATCTATCATAATGACAC 58.342 37.037 0.00 0.00 34.28 3.67
420 421 8.591072 TCATGAGCTTCATCTATCATAATGACA 58.409 33.333 0.00 0.00 34.28 3.58
421 422 8.999220 TCATGAGCTTCATCTATCATAATGAC 57.001 34.615 0.00 0.00 34.28 3.06
426 427 9.872721 GATCTTTCATGAGCTTCATCTATCATA 57.127 33.333 0.00 0.00 34.28 2.15
427 428 7.825270 GGATCTTTCATGAGCTTCATCTATCAT 59.175 37.037 0.00 0.00 34.28 2.45
428 429 7.160049 GGATCTTTCATGAGCTTCATCTATCA 58.840 38.462 0.00 0.00 34.28 2.15
429 430 7.160049 TGGATCTTTCATGAGCTTCATCTATC 58.840 38.462 0.00 0.00 34.28 2.08
430 431 7.075851 TGGATCTTTCATGAGCTTCATCTAT 57.924 36.000 0.00 0.00 34.28 1.98
431 432 6.490241 TGGATCTTTCATGAGCTTCATCTA 57.510 37.500 0.00 0.00 34.28 1.98
432 433 5.369409 TGGATCTTTCATGAGCTTCATCT 57.631 39.130 0.00 0.00 34.28 2.90
433 434 6.636562 AATGGATCTTTCATGAGCTTCATC 57.363 37.500 0.00 0.00 34.28 2.92
434 435 6.605995 TGAAATGGATCTTTCATGAGCTTCAT 59.394 34.615 6.13 0.00 39.55 2.57
435 436 5.947566 TGAAATGGATCTTTCATGAGCTTCA 59.052 36.000 6.13 0.54 39.55 3.02
436 437 6.446781 TGAAATGGATCTTTCATGAGCTTC 57.553 37.500 6.13 0.00 39.55 3.86
437 438 6.350780 GGTTGAAATGGATCTTTCATGAGCTT 60.351 38.462 10.06 0.00 42.87 3.74
438 439 5.126707 GGTTGAAATGGATCTTTCATGAGCT 59.873 40.000 10.06 0.00 42.87 4.09
439 440 5.346522 GGTTGAAATGGATCTTTCATGAGC 58.653 41.667 10.06 4.15 42.87 4.26
440 441 5.355071 TCGGTTGAAATGGATCTTTCATGAG 59.645 40.000 10.06 5.91 42.87 2.90
441 442 5.123820 GTCGGTTGAAATGGATCTTTCATGA 59.876 40.000 10.06 0.00 42.87 3.07
442 443 5.106197 TGTCGGTTGAAATGGATCTTTCATG 60.106 40.000 10.06 5.30 42.87 3.07
443 444 5.009631 TGTCGGTTGAAATGGATCTTTCAT 58.990 37.500 10.06 0.00 42.87 2.57
444 445 4.393834 TGTCGGTTGAAATGGATCTTTCA 58.606 39.130 6.13 6.13 41.97 2.69
445 446 5.355350 AGATGTCGGTTGAAATGGATCTTTC 59.645 40.000 0.00 0.00 36.00 2.62
446 447 5.256474 AGATGTCGGTTGAAATGGATCTTT 58.744 37.500 0.00 0.00 0.00 2.52
447 448 4.848357 AGATGTCGGTTGAAATGGATCTT 58.152 39.130 0.00 0.00 0.00 2.40
448 449 4.494091 AGATGTCGGTTGAAATGGATCT 57.506 40.909 0.00 0.00 0.00 2.75
449 450 4.731773 GCAAGATGTCGGTTGAAATGGATC 60.732 45.833 0.00 0.00 0.00 3.36
530 531 9.921637 GGGAAACTAAACATTATTCACAAATGA 57.078 29.630 3.01 0.00 37.68 2.57
531 532 8.859156 CGGGAAACTAAACATTATTCACAAATG 58.141 33.333 0.00 0.00 39.68 2.32
532 533 7.544217 GCGGGAAACTAAACATTATTCACAAAT 59.456 33.333 0.00 0.00 0.00 2.32
533 534 6.864165 GCGGGAAACTAAACATTATTCACAAA 59.136 34.615 0.00 0.00 0.00 2.83
534 535 6.016192 TGCGGGAAACTAAACATTATTCACAA 60.016 34.615 0.00 0.00 0.00 3.33
535 536 5.473846 TGCGGGAAACTAAACATTATTCACA 59.526 36.000 0.00 0.00 0.00 3.58
536 537 5.945155 TGCGGGAAACTAAACATTATTCAC 58.055 37.500 0.00 0.00 0.00 3.18
537 538 6.405286 CCATGCGGGAAACTAAACATTATTCA 60.405 38.462 0.00 0.00 40.01 2.57
538 539 5.977129 CCATGCGGGAAACTAAACATTATTC 59.023 40.000 0.00 0.00 40.01 1.75
539 540 5.681179 GCCATGCGGGAAACTAAACATTATT 60.681 40.000 0.00 0.00 40.01 1.40
540 541 4.202111 GCCATGCGGGAAACTAAACATTAT 60.202 41.667 0.00 0.00 40.01 1.28
541 542 3.129638 GCCATGCGGGAAACTAAACATTA 59.870 43.478 0.00 0.00 40.01 1.90
542 543 2.094234 GCCATGCGGGAAACTAAACATT 60.094 45.455 0.00 0.00 40.01 2.71
543 544 1.476488 GCCATGCGGGAAACTAAACAT 59.524 47.619 0.00 0.00 40.01 2.71
544 545 0.885196 GCCATGCGGGAAACTAAACA 59.115 50.000 0.00 0.00 40.01 2.83
545 546 0.885196 TGCCATGCGGGAAACTAAAC 59.115 50.000 0.00 0.00 40.01 2.01
546 547 1.476085 CATGCCATGCGGGAAACTAAA 59.524 47.619 0.00 0.00 40.01 1.85
547 548 1.102154 CATGCCATGCGGGAAACTAA 58.898 50.000 0.00 0.00 40.01 2.24
548 549 0.034574 ACATGCCATGCGGGAAACTA 60.035 50.000 4.17 0.00 40.01 2.24
549 550 0.899717 AACATGCCATGCGGGAAACT 60.900 50.000 4.17 0.00 40.01 2.66
550 551 0.037419 AAACATGCCATGCGGGAAAC 60.037 50.000 4.17 0.00 40.01 2.78
551 552 0.246086 GAAACATGCCATGCGGGAAA 59.754 50.000 4.17 0.00 40.01 3.13
552 553 0.611618 AGAAACATGCCATGCGGGAA 60.612 50.000 4.17 0.00 40.01 3.97
553 554 0.611618 AAGAAACATGCCATGCGGGA 60.612 50.000 4.17 0.00 40.01 5.14
554 555 0.247185 AAAGAAACATGCCATGCGGG 59.753 50.000 4.17 0.00 40.85 6.13
555 556 1.994779 GAAAAGAAACATGCCATGCGG 59.005 47.619 4.17 0.00 0.00 5.69
556 557 2.674954 TGAAAAGAAACATGCCATGCG 58.325 42.857 4.17 0.00 0.00 4.73
557 558 4.247258 TGATGAAAAGAAACATGCCATGC 58.753 39.130 4.17 0.00 0.00 4.06
558 559 6.237728 CGATTGATGAAAAGAAACATGCCATG 60.238 38.462 2.40 2.40 0.00 3.66
559 560 5.808540 CGATTGATGAAAAGAAACATGCCAT 59.191 36.000 0.00 0.00 0.00 4.40
560 561 5.048154 TCGATTGATGAAAAGAAACATGCCA 60.048 36.000 0.00 0.00 0.00 4.92
561 562 5.401550 TCGATTGATGAAAAGAAACATGCC 58.598 37.500 0.00 0.00 0.00 4.40
562 563 6.748658 TGATCGATTGATGAAAAGAAACATGC 59.251 34.615 0.00 0.00 34.09 4.06
563 564 8.179615 TCTGATCGATTGATGAAAAGAAACATG 58.820 33.333 0.00 0.00 34.09 3.21
564 565 8.272545 TCTGATCGATTGATGAAAAGAAACAT 57.727 30.769 0.00 0.00 34.09 2.71
565 566 7.671495 TCTGATCGATTGATGAAAAGAAACA 57.329 32.000 0.00 0.00 34.09 2.83
566 567 9.219497 GAATCTGATCGATTGATGAAAAGAAAC 57.781 33.333 14.65 0.00 42.31 2.78
567 568 8.949177 TGAATCTGATCGATTGATGAAAAGAAA 58.051 29.630 14.65 0.00 42.31 2.52
568 569 8.496707 TGAATCTGATCGATTGATGAAAAGAA 57.503 30.769 14.65 0.00 42.31 2.52
569 570 8.393366 GTTGAATCTGATCGATTGATGAAAAGA 58.607 33.333 14.65 0.00 42.31 2.52
570 571 8.179615 TGTTGAATCTGATCGATTGATGAAAAG 58.820 33.333 14.65 0.00 42.31 2.27
571 572 7.964559 GTGTTGAATCTGATCGATTGATGAAAA 59.035 33.333 14.65 7.55 42.31 2.29
572 573 7.335171 AGTGTTGAATCTGATCGATTGATGAAA 59.665 33.333 14.65 9.31 42.31 2.69
573 574 6.820152 AGTGTTGAATCTGATCGATTGATGAA 59.180 34.615 14.65 8.38 42.31 2.57
574 575 6.257193 CAGTGTTGAATCTGATCGATTGATGA 59.743 38.462 14.65 0.00 42.31 2.92
575 576 6.036844 ACAGTGTTGAATCTGATCGATTGATG 59.963 38.462 14.65 6.88 42.31 3.07
576 577 6.111382 ACAGTGTTGAATCTGATCGATTGAT 58.889 36.000 14.65 4.20 42.31 2.57
577 578 5.482006 ACAGTGTTGAATCTGATCGATTGA 58.518 37.500 14.65 1.66 42.31 2.57
578 579 5.791367 ACAGTGTTGAATCTGATCGATTG 57.209 39.130 14.65 0.00 42.31 2.67
579 580 5.122869 CCAACAGTGTTGAATCTGATCGATT 59.877 40.000 32.72 11.05 44.87 3.34
580 581 4.633126 CCAACAGTGTTGAATCTGATCGAT 59.367 41.667 32.72 0.00 35.84 3.59
581 582 3.996363 CCAACAGTGTTGAATCTGATCGA 59.004 43.478 32.72 0.00 35.84 3.59
582 583 3.425359 GCCAACAGTGTTGAATCTGATCG 60.425 47.826 32.72 15.97 35.84 3.69
583 584 3.119708 GGCCAACAGTGTTGAATCTGATC 60.120 47.826 32.72 12.89 35.84 2.92
584 585 2.821969 GGCCAACAGTGTTGAATCTGAT 59.178 45.455 32.72 0.00 35.84 2.90
585 586 2.229792 GGCCAACAGTGTTGAATCTGA 58.770 47.619 32.72 0.00 35.84 3.27
586 587 1.955778 TGGCCAACAGTGTTGAATCTG 59.044 47.619 32.72 18.54 37.65 2.90
587 588 2.233271 CTGGCCAACAGTGTTGAATCT 58.767 47.619 32.72 0.00 42.42 2.40
588 589 2.712057 CTGGCCAACAGTGTTGAATC 57.288 50.000 32.72 21.52 42.42 2.52
598 599 3.286751 GCGCAACTCTGGCCAACA 61.287 61.111 7.01 0.00 0.00 3.33
599 600 4.043200 GGCGCAACTCTGGCCAAC 62.043 66.667 10.83 0.00 46.13 3.77
603 604 0.378610 GAATTAGGCGCAACTCTGGC 59.621 55.000 10.83 0.00 0.00 4.85
604 605 1.737838 TGAATTAGGCGCAACTCTGG 58.262 50.000 10.83 0.00 0.00 3.86
605 606 4.025396 CAGTATGAATTAGGCGCAACTCTG 60.025 45.833 10.83 0.00 39.69 3.35
606 607 4.122776 CAGTATGAATTAGGCGCAACTCT 58.877 43.478 10.83 0.00 39.69 3.24
607 608 4.119862 TCAGTATGAATTAGGCGCAACTC 58.880 43.478 10.83 0.00 45.97 3.01
608 609 4.137116 TCAGTATGAATTAGGCGCAACT 57.863 40.909 10.83 0.00 45.97 3.16
623 624 9.911788 ACAAAGATTCATCCTTAACATCAGTAT 57.088 29.630 0.00 0.00 0.00 2.12
624 625 9.739276 AACAAAGATTCATCCTTAACATCAGTA 57.261 29.630 0.00 0.00 0.00 2.74
625 626 8.641498 AACAAAGATTCATCCTTAACATCAGT 57.359 30.769 0.00 0.00 0.00 3.41
626 627 9.918630 AAAACAAAGATTCATCCTTAACATCAG 57.081 29.630 0.00 0.00 0.00 2.90
627 628 9.912634 GAAAACAAAGATTCATCCTTAACATCA 57.087 29.630 0.00 0.00 0.00 3.07
635 636 9.981460 ACCTATTAGAAAACAAAGATTCATCCT 57.019 29.630 0.00 0.00 0.00 3.24
642 643 9.442047 CAGTCTGACCTATTAGAAAACAAAGAT 57.558 33.333 3.76 0.00 0.00 2.40
643 644 7.878127 CCAGTCTGACCTATTAGAAAACAAAGA 59.122 37.037 3.76 0.00 0.00 2.52
644 645 7.878127 TCCAGTCTGACCTATTAGAAAACAAAG 59.122 37.037 3.76 0.00 0.00 2.77
645 646 7.741785 TCCAGTCTGACCTATTAGAAAACAAA 58.258 34.615 3.76 0.00 0.00 2.83
646 647 7.311092 TCCAGTCTGACCTATTAGAAAACAA 57.689 36.000 3.76 0.00 0.00 2.83
647 648 6.928348 TCCAGTCTGACCTATTAGAAAACA 57.072 37.500 3.76 0.00 0.00 2.83
648 649 8.261522 AGAATCCAGTCTGACCTATTAGAAAAC 58.738 37.037 3.76 0.00 0.00 2.43
649 650 8.380742 AGAATCCAGTCTGACCTATTAGAAAA 57.619 34.615 3.76 0.00 0.00 2.29
650 651 7.979786 AGAATCCAGTCTGACCTATTAGAAA 57.020 36.000 3.76 0.00 0.00 2.52
651 652 9.083422 CATAGAATCCAGTCTGACCTATTAGAA 57.917 37.037 3.76 0.00 0.00 2.10
652 653 7.671819 CCATAGAATCCAGTCTGACCTATTAGA 59.328 40.741 3.76 0.00 0.00 2.10
653 654 7.671819 TCCATAGAATCCAGTCTGACCTATTAG 59.328 40.741 3.76 0.00 0.00 1.73
654 655 7.535738 TCCATAGAATCCAGTCTGACCTATTA 58.464 38.462 3.76 0.00 0.00 0.98
655 656 6.385443 TCCATAGAATCCAGTCTGACCTATT 58.615 40.000 3.76 2.12 0.00 1.73
656 657 5.970289 TCCATAGAATCCAGTCTGACCTAT 58.030 41.667 3.76 0.62 0.00 2.57
657 658 5.103473 ACTCCATAGAATCCAGTCTGACCTA 60.103 44.000 3.76 0.00 0.00 3.08
658 659 4.222336 CTCCATAGAATCCAGTCTGACCT 58.778 47.826 3.76 0.00 0.00 3.85
659 660 3.964031 ACTCCATAGAATCCAGTCTGACC 59.036 47.826 3.76 0.00 0.00 4.02
660 661 6.716934 TTACTCCATAGAATCCAGTCTGAC 57.283 41.667 0.00 0.00 0.00 3.51
661 662 7.921041 ATTTACTCCATAGAATCCAGTCTGA 57.079 36.000 0.00 0.00 0.00 3.27
662 663 7.816995 GCTATTTACTCCATAGAATCCAGTCTG 59.183 40.741 0.00 0.00 0.00 3.51
663 664 7.510685 TGCTATTTACTCCATAGAATCCAGTCT 59.489 37.037 0.00 0.00 0.00 3.24
664 665 7.671302 TGCTATTTACTCCATAGAATCCAGTC 58.329 38.462 0.00 0.00 0.00 3.51
665 666 7.618019 TGCTATTTACTCCATAGAATCCAGT 57.382 36.000 0.00 0.00 0.00 4.00
974 978 0.902516 GTGAGAGCAGGGGAGTGAGT 60.903 60.000 0.00 0.00 0.00 3.41
1084 1088 0.836400 TCCTCCGAGCTGGTTTCCTT 60.836 55.000 0.00 0.00 39.52 3.36
1587 1990 4.847198 ACATCACTGAACATCCATAGCAA 58.153 39.130 0.00 0.00 0.00 3.91
1714 2117 5.010516 CACCACAATTGACACCATTTTCCTA 59.989 40.000 13.59 0.00 0.00 2.94
1728 2202 3.253188 CCCACTCTACAACACCACAATTG 59.747 47.826 3.24 3.24 0.00 2.32
1973 3093 1.202855 CCATCCTACCATCCTGCCAAG 60.203 57.143 0.00 0.00 0.00 3.61
2311 3572 6.382919 AAAGGCCTTTGGATGTACTTACTA 57.617 37.500 29.91 0.00 0.00 1.82
2419 3713 8.520351 ACAACTTAACAACATAGGAAATAAGGC 58.480 33.333 0.00 0.00 0.00 4.35
2608 3961 3.307059 GCATTTGGTCAGAGAGTAGTGGT 60.307 47.826 0.00 0.00 0.00 4.16
2737 4104 3.392285 CCCATGTCAGGATCCATCTGTAA 59.608 47.826 15.82 0.00 34.15 2.41
2816 4213 2.131067 CGCCTCCTCCTCCTCCTTC 61.131 68.421 0.00 0.00 0.00 3.46
2817 4220 2.042435 CGCCTCCTCCTCCTCCTT 60.042 66.667 0.00 0.00 0.00 3.36
3332 4880 5.645497 ACATTGCCTCACTAAGTTCTTGATC 59.355 40.000 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.