Multiple sequence alignment - TraesCS2B01G108200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G108200 chr2B 100.000 5092 0 0 1 5092 69045118 69040027 0.000000e+00 9404.0
1 TraesCS2B01G108200 chr2B 86.145 166 20 2 3583 3746 453265448 453265612 5.240000e-40 176.0
2 TraesCS2B01G108200 chr2B 78.596 285 23 21 1855 2137 69055598 69055350 2.460000e-33 154.0
3 TraesCS2B01G108200 chr2B 91.765 85 7 0 4615 4699 69131778 69131694 8.960000e-23 119.0
4 TraesCS2B01G108200 chr2A 93.392 3420 172 30 166 3551 47834444 47831045 0.000000e+00 5014.0
5 TraesCS2B01G108200 chr2A 88.426 864 64 24 3767 4618 47830865 47830026 0.000000e+00 1009.0
6 TraesCS2B01G108200 chr2A 93.491 169 4 2 1 165 47835506 47835341 1.420000e-60 244.0
7 TraesCS2B01G108200 chr2A 91.736 121 9 1 4707 4827 47830023 47829904 3.150000e-37 167.0
8 TraesCS2B01G108200 chr2D 88.748 3466 225 92 177 3547 43995924 43992529 0.000000e+00 4087.0
9 TraesCS2B01G108200 chr2D 92.893 788 38 11 3767 4541 43992346 43991564 0.000000e+00 1129.0
10 TraesCS2B01G108200 chr2D 95.152 165 4 1 1 165 43996444 43996284 1.820000e-64 257.0
11 TraesCS2B01G108200 chr2D 92.308 91 7 0 4932 5022 43991244 43991154 4.140000e-26 130.0
12 TraesCS2B01G108200 chr2D 91.765 85 7 0 4615 4699 485880080 485880164 8.960000e-23 119.0
13 TraesCS2B01G108200 chr2D 94.340 53 3 0 4546 4598 43991537 43991485 1.180000e-11 82.4
14 TraesCS2B01G108200 chr5B 82.960 446 56 12 2638 3075 154053276 154053709 8.000000e-103 385.0
15 TraesCS2B01G108200 chr5B 81.579 342 44 9 2742 3075 154016414 154016084 1.090000e-66 265.0
16 TraesCS2B01G108200 chr5B 93.103 87 6 0 4615 4701 51840688 51840602 1.490000e-25 128.0
17 TraesCS2B01G108200 chr7B 82.511 446 56 12 2638 3075 715317650 715318081 6.230000e-99 372.0
18 TraesCS2B01G108200 chr7B 87.647 170 15 5 3583 3748 431659097 431659264 5.200000e-45 193.0
19 TraesCS2B01G108200 chr7B 87.805 164 17 2 3583 3744 245077364 245077526 6.730000e-44 189.0
20 TraesCS2B01G108200 chr7B 85.380 171 20 3 3583 3749 460995767 460995598 6.780000e-39 172.0
21 TraesCS2B01G108200 chr7B 90.110 91 9 0 4611 4701 476201214 476201124 8.960000e-23 119.0
22 TraesCS2B01G108200 chr4A 81.053 475 68 16 1033 1496 143446373 143445910 4.850000e-95 359.0
23 TraesCS2B01G108200 chr4B 79.579 475 75 15 1033 1496 406803703 406804166 2.290000e-83 320.0
24 TraesCS2B01G108200 chr4B 88.024 167 15 4 3583 3746 639453638 639453802 5.200000e-45 193.0
25 TraesCS2B01G108200 chr4B 90.698 86 8 0 4615 4700 183728201 183728116 1.160000e-21 115.0
26 TraesCS2B01G108200 chr4B 90.698 86 8 0 4615 4700 588428235 588428320 1.160000e-21 115.0
27 TraesCS2B01G108200 chr5A 88.095 168 13 6 3584 3746 706677036 706676871 5.200000e-45 193.0
28 TraesCS2B01G108200 chr5A 87.135 171 19 2 3582 3750 653299602 653299433 1.870000e-44 191.0
29 TraesCS2B01G108200 chr7A 86.061 165 20 2 3581 3743 524701419 524701256 1.880000e-39 174.0
30 TraesCS2B01G108200 chr3D 85.227 176 18 7 3581 3751 100389539 100389367 1.880000e-39 174.0
31 TraesCS2B01G108200 chr3D 83.516 91 11 3 166 254 96414134 96414222 1.180000e-11 82.4
32 TraesCS2B01G108200 chr3D 86.667 75 9 1 185 259 471260483 471260556 1.180000e-11 82.4
33 TraesCS2B01G108200 chr3D 91.667 48 4 0 210 257 481118580 481118533 3.290000e-07 67.6
34 TraesCS2B01G108200 chr1A 92.222 90 6 1 4611 4699 307866667 307866756 5.350000e-25 126.0
35 TraesCS2B01G108200 chr1B 91.765 85 7 0 4615 4699 657276926 657277010 8.960000e-23 119.0
36 TraesCS2B01G108200 chr4D 89.130 92 10 0 4608 4699 465045606 465045697 1.160000e-21 115.0
37 TraesCS2B01G108200 chr7D 83.908 87 11 2 174 257 136292123 136292037 4.230000e-11 80.5
38 TraesCS2B01G108200 chr5D 90.909 55 5 0 180 234 267212284 267212230 1.970000e-09 75.0
39 TraesCS2B01G108200 chr6D 92.000 50 4 0 208 257 455630440 455630391 2.540000e-08 71.3
40 TraesCS2B01G108200 chr3A 93.617 47 3 0 191 237 114449590 114449636 2.540000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G108200 chr2B 69040027 69045118 5091 True 9404.00 9404 100.00000 1 5092 1 chr2B.!!$R1 5091
1 TraesCS2B01G108200 chr2A 47829904 47835506 5602 True 1608.50 5014 91.76125 1 4827 4 chr2A.!!$R1 4826
2 TraesCS2B01G108200 chr2D 43991154 43996444 5290 True 1137.08 4087 92.68820 1 5022 5 chr2D.!!$R1 5021

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
478 1386 0.108520 TTACGAATCACCGGCAGACC 60.109 55.000 0.00 0.00 0.00 3.85 F
692 1605 1.476085 TGGCTGGCCATTGTTTTATCG 59.524 47.619 5.51 0.00 41.89 2.92 F
1787 2716 0.528684 GTCTGAATCTCTTCGGCGGG 60.529 60.000 7.21 0.01 37.62 6.13 F
2002 2931 0.039035 TTGGGGAGTACATTGTGCCC 59.961 55.000 13.03 13.03 44.57 5.36 F
3461 4474 1.561542 CCCTTACTCTGGGCACTGATT 59.438 52.381 0.00 0.00 37.99 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1304 2233 1.289109 CGTCGAACACCTGGCGAAAT 61.289 55.000 0.00 0.0 35.66 2.17 R
2002 2931 1.603802 ACTTGCTTGACATGTGGAACG 59.396 47.619 1.15 0.0 42.39 3.95 R
2919 3903 0.321996 AGCGGTTCAGAGGGTTCTTC 59.678 55.000 0.00 0.0 0.00 2.87 R
3620 4724 0.380733 CGCATGTAGTCCGCACTAGA 59.619 55.000 0.00 0.0 35.67 2.43 R
4945 6158 0.030908 CGCCCTCGATCACCTTAGAC 59.969 60.000 0.00 0.0 38.10 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
150 155 5.750524 TGCCAGTATATGCTCACCTTTTTA 58.249 37.500 0.00 0.00 0.00 1.52
197 1105 5.926894 AAAAGAAAGAAAAACGAAGCGAC 57.073 34.783 0.00 0.00 0.00 5.19
204 1112 2.699251 AAAACGAAGCGACCAAATCC 57.301 45.000 0.00 0.00 0.00 3.01
242 1150 1.272490 ACTATGACCATATCCGCACCG 59.728 52.381 0.00 0.00 0.00 4.94
302 1210 1.187087 AAAGGAGTGACTAGCCCTCG 58.813 55.000 0.00 0.00 0.00 4.63
346 1254 9.314321 AGTCGGTTTTATTCATACACATCTAAG 57.686 33.333 0.00 0.00 0.00 2.18
443 1351 8.623903 TCAAACAAATATCTTGCACATATCTCC 58.376 33.333 0.00 0.00 0.00 3.71
446 1354 8.107399 ACAAATATCTTGCACATATCTCCATG 57.893 34.615 0.00 0.00 0.00 3.66
452 1360 2.224042 TGCACATATCTCCATGTCGACC 60.224 50.000 14.12 0.00 37.02 4.79
454 1362 1.613925 ACATATCTCCATGTCGACCGG 59.386 52.381 14.12 13.81 33.89 5.28
473 1381 1.332686 GGGATTTTACGAATCACCGGC 59.667 52.381 0.00 0.00 0.00 6.13
478 1386 0.108520 TTACGAATCACCGGCAGACC 60.109 55.000 0.00 0.00 0.00 3.85
546 1457 8.778141 ACACATAGTACAATCGTAAATACTCG 57.222 34.615 0.00 0.00 0.00 4.18
554 1465 6.037726 ACAATCGTAAATACTCGCATACACA 58.962 36.000 0.00 0.00 0.00 3.72
561 1472 6.583912 AAATACTCGCATACACACACATAC 57.416 37.500 0.00 0.00 0.00 2.39
692 1605 1.476085 TGGCTGGCCATTGTTTTATCG 59.524 47.619 5.51 0.00 41.89 2.92
726 1639 2.159382 GCTTTCCGAAAATCCCACTCA 58.841 47.619 0.00 0.00 0.00 3.41
877 1790 3.866582 CCCCAGTCCCAGATCCGC 61.867 72.222 0.00 0.00 0.00 5.54
878 1791 3.866582 CCCAGTCCCAGATCCGCC 61.867 72.222 0.00 0.00 0.00 6.13
970 1884 2.989881 TAGGCAGACACGAGCACGG 61.990 63.158 8.74 0.00 44.46 4.94
987 1901 4.722700 GCTGCGGGGGCAAGAAGA 62.723 66.667 0.00 0.00 0.00 2.87
1033 1947 3.373658 GGAGAGGGAGAGGAGAAAGATGA 60.374 52.174 0.00 0.00 0.00 2.92
1228 2142 1.516603 GTCTTCGCCGTACTGCTCC 60.517 63.158 7.70 0.00 0.00 4.70
1229 2143 2.579787 CTTCGCCGTACTGCTCCG 60.580 66.667 7.70 0.00 0.00 4.63
1261 2190 2.018324 GTCCGGTTCGTCGTTGGTC 61.018 63.158 0.00 0.00 0.00 4.02
1304 2233 2.592032 TTCGCTGGATCTGTGGCCA 61.592 57.895 0.00 0.00 0.00 5.36
1616 2545 1.989966 CTACGCTGGTGGTCGTCGAT 61.990 60.000 0.00 0.00 39.79 3.59
1787 2716 0.528684 GTCTGAATCTCTTCGGCGGG 60.529 60.000 7.21 0.01 37.62 6.13
1802 2731 1.227674 CGGGCAGGAGGTAGCAATC 60.228 63.158 0.00 0.00 0.00 2.67
1824 2753 4.510340 TCTTCTTTAGACCGAACAAACTGC 59.490 41.667 0.00 0.00 0.00 4.40
1835 2764 3.181485 CGAACAAACTGCCCCTTACAAAA 60.181 43.478 0.00 0.00 0.00 2.44
1843 2772 3.309296 TGCCCCTTACAAAACATGGAAA 58.691 40.909 0.00 0.00 29.22 3.13
1856 2785 8.149647 ACAAAACATGGAAATTTAGATTGAGCA 58.850 29.630 0.00 0.00 0.00 4.26
1912 2841 6.706716 TGATGCATTGTTGTGTGAATGATTTT 59.293 30.769 0.00 0.00 32.24 1.82
2002 2931 0.039035 TTGGGGAGTACATTGTGCCC 59.961 55.000 13.03 13.03 44.57 5.36
2049 2978 4.097892 GGTGGGTAGGCATTACAAAATGAG 59.902 45.833 2.38 0.00 44.50 2.90
2078 3024 5.499139 TTGTAGCTTCTTTTGTGGAGTTG 57.501 39.130 0.00 0.00 0.00 3.16
2080 3026 4.947388 TGTAGCTTCTTTTGTGGAGTTGTT 59.053 37.500 0.00 0.00 0.00 2.83
2324 3273 6.485648 TCACTCAATTGCCATTCTGATATCTG 59.514 38.462 3.98 3.61 0.00 2.90
2696 3648 8.746922 TTTACATCTGTGAATTTTCATTGAGC 57.253 30.769 0.00 0.00 39.73 4.26
2708 3660 5.700722 TTTCATTGAGCATCTATCATGCC 57.299 39.130 2.93 0.00 45.59 4.40
2740 3692 5.375417 TTTGATCACATACCTTTGCTGTG 57.625 39.130 0.00 0.00 41.24 3.66
2784 3736 9.567776 TTAGGATGTGTTCTTGTCAATTTCTTA 57.432 29.630 0.00 0.00 0.00 2.10
2785 3737 7.875971 AGGATGTGTTCTTGTCAATTTCTTAC 58.124 34.615 0.00 0.00 0.00 2.34
2867 3820 2.419851 CCACTTTGGTGCCAACATGTTT 60.420 45.455 8.77 0.00 41.75 2.83
2901 3854 4.030913 TCAAGTACCTACTCCCATTCCTG 58.969 47.826 0.00 0.00 34.99 3.86
3035 4019 5.184096 TGCTGGCACCGAAGAATTTTATTTA 59.816 36.000 0.00 0.00 0.00 1.40
3061 4050 8.762645 AGTTCAGAATGTTATACTCTGGAATCA 58.237 33.333 0.00 0.00 37.71 2.57
3062 4051 8.821894 GTTCAGAATGTTATACTCTGGAATCAC 58.178 37.037 0.00 0.00 37.71 3.06
3079 4068 9.823647 CTGGAATCACAATAGAGTAATAAGTGT 57.176 33.333 0.00 0.00 0.00 3.55
3128 4118 6.566079 TCCTCAGTCATCCATCTGTAATTT 57.434 37.500 0.00 0.00 33.89 1.82
3131 4121 6.600822 CCTCAGTCATCCATCTGTAATTTGTT 59.399 38.462 0.00 0.00 33.89 2.83
3132 4122 7.381766 TCAGTCATCCATCTGTAATTTGTTG 57.618 36.000 0.00 0.00 33.89 3.33
3169 4161 2.233676 TGCTTATTGCGACTCCTCTTCA 59.766 45.455 0.00 0.00 46.63 3.02
3259 4266 6.532365 TTTGTTGAAACCTTTTGTTGACAC 57.468 33.333 0.00 0.00 37.23 3.67
3277 4284 4.218200 TGACACCTTGCATCACCTTTATTG 59.782 41.667 0.00 0.00 0.00 1.90
3328 4335 9.717942 AGATTGAATTTAGAGGTATATGACTGC 57.282 33.333 0.00 0.00 0.00 4.40
3367 4378 5.391312 AACCATTTAATCAAGTGTGGCTC 57.609 39.130 0.00 0.00 0.00 4.70
3411 4424 6.310711 GTGCCACTCTATTTATAGCCGATAAC 59.689 42.308 0.00 0.00 29.33 1.89
3433 4446 5.969423 ACAATGTTTAGCTGAATTCCCATG 58.031 37.500 2.27 0.00 0.00 3.66
3440 4453 3.220110 AGCTGAATTCCCATGCTGTATG 58.780 45.455 2.27 0.00 36.50 2.39
3461 4474 1.561542 CCCTTACTCTGGGCACTGATT 59.438 52.381 0.00 0.00 37.99 2.57
3470 4483 3.152341 CTGGGCACTGATTTGTCTTCTT 58.848 45.455 0.00 0.00 0.00 2.52
3498 4511 8.514594 CATGGTATGCTTTTGAGAAGAAAAGTA 58.485 33.333 0.00 0.00 42.55 2.24
3511 4533 7.063426 TGAGAAGAAAAGTACACGATATGCTTG 59.937 37.037 0.00 0.00 0.00 4.01
3514 4536 7.849804 AGAAAAGTACACGATATGCTTGATT 57.150 32.000 0.00 0.00 0.00 2.57
3518 4540 5.428253 AGTACACGATATGCTTGATTGGTT 58.572 37.500 0.00 0.00 0.00 3.67
3566 4670 5.701290 AGAGTAGGTAAACAAACTGCATGAC 59.299 40.000 0.00 0.00 0.00 3.06
3569 4673 3.498397 AGGTAAACAAACTGCATGACGAG 59.502 43.478 0.00 0.00 0.00 4.18
3570 4674 3.250040 GGTAAACAAACTGCATGACGAGT 59.750 43.478 0.00 0.00 0.00 4.18
3571 4675 3.338818 AAACAAACTGCATGACGAGTG 57.661 42.857 0.00 0.00 0.00 3.51
3572 4676 2.238942 ACAAACTGCATGACGAGTGA 57.761 45.000 0.00 0.00 0.00 3.41
3573 4677 2.771089 ACAAACTGCATGACGAGTGAT 58.229 42.857 0.00 0.00 0.00 3.06
3574 4678 3.141398 ACAAACTGCATGACGAGTGATT 58.859 40.909 0.00 0.00 0.00 2.57
3575 4679 4.314961 ACAAACTGCATGACGAGTGATTA 58.685 39.130 0.00 0.00 0.00 1.75
3576 4680 4.389992 ACAAACTGCATGACGAGTGATTAG 59.610 41.667 0.00 0.00 0.00 1.73
3577 4681 4.456280 AACTGCATGACGAGTGATTAGA 57.544 40.909 0.00 0.00 0.00 2.10
3578 4682 4.456280 ACTGCATGACGAGTGATTAGAA 57.544 40.909 0.00 0.00 0.00 2.10
3579 4683 4.428209 ACTGCATGACGAGTGATTAGAAG 58.572 43.478 0.00 0.00 0.00 2.85
3580 4684 4.081972 ACTGCATGACGAGTGATTAGAAGT 60.082 41.667 0.00 0.00 0.00 3.01
3581 4685 4.176271 TGCATGACGAGTGATTAGAAGTG 58.824 43.478 0.00 0.00 0.00 3.16
3582 4686 4.177026 GCATGACGAGTGATTAGAAGTGT 58.823 43.478 0.00 0.00 0.00 3.55
3583 4687 5.105917 TGCATGACGAGTGATTAGAAGTGTA 60.106 40.000 0.00 0.00 0.00 2.90
3584 4688 5.230306 GCATGACGAGTGATTAGAAGTGTAC 59.770 44.000 0.00 0.00 0.00 2.90
3585 4689 6.556212 CATGACGAGTGATTAGAAGTGTACT 58.444 40.000 0.00 0.00 0.00 2.73
3586 4690 6.179504 TGACGAGTGATTAGAAGTGTACTC 57.820 41.667 0.00 0.00 33.15 2.59
3587 4691 5.123502 TGACGAGTGATTAGAAGTGTACTCC 59.876 44.000 0.00 0.00 32.94 3.85
3588 4692 4.398673 ACGAGTGATTAGAAGTGTACTCCC 59.601 45.833 0.00 0.00 32.94 4.30
3589 4693 4.641094 CGAGTGATTAGAAGTGTACTCCCT 59.359 45.833 0.00 0.00 32.94 4.20
3590 4694 5.220892 CGAGTGATTAGAAGTGTACTCCCTC 60.221 48.000 0.00 0.00 32.94 4.30
3591 4695 4.957327 AGTGATTAGAAGTGTACTCCCTCC 59.043 45.833 0.00 0.00 0.00 4.30
3592 4696 3.952323 TGATTAGAAGTGTACTCCCTCCG 59.048 47.826 0.00 0.00 0.00 4.63
3593 4697 3.446442 TTAGAAGTGTACTCCCTCCGT 57.554 47.619 0.00 0.00 0.00 4.69
3594 4698 2.305858 AGAAGTGTACTCCCTCCGTT 57.694 50.000 0.00 0.00 0.00 4.44
3595 4699 2.606378 AGAAGTGTACTCCCTCCGTTT 58.394 47.619 0.00 0.00 0.00 3.60
3596 4700 2.561858 AGAAGTGTACTCCCTCCGTTTC 59.438 50.000 0.00 0.00 0.00 2.78
3597 4701 2.305858 AGTGTACTCCCTCCGTTTCT 57.694 50.000 0.00 0.00 0.00 2.52
3598 4702 3.446442 AGTGTACTCCCTCCGTTTCTA 57.554 47.619 0.00 0.00 0.00 2.10
3599 4703 3.771216 AGTGTACTCCCTCCGTTTCTAA 58.229 45.455 0.00 0.00 0.00 2.10
3600 4704 4.154942 AGTGTACTCCCTCCGTTTCTAAA 58.845 43.478 0.00 0.00 0.00 1.85
3601 4705 4.776308 AGTGTACTCCCTCCGTTTCTAAAT 59.224 41.667 0.00 0.00 0.00 1.40
3602 4706 5.954150 AGTGTACTCCCTCCGTTTCTAAATA 59.046 40.000 0.00 0.00 0.00 1.40
3603 4707 6.610425 AGTGTACTCCCTCCGTTTCTAAATAT 59.390 38.462 0.00 0.00 0.00 1.28
3604 4708 7.781693 AGTGTACTCCCTCCGTTTCTAAATATA 59.218 37.037 0.00 0.00 0.00 0.86
3605 4709 8.416329 GTGTACTCCCTCCGTTTCTAAATATAA 58.584 37.037 0.00 0.00 0.00 0.98
3606 4710 8.636213 TGTACTCCCTCCGTTTCTAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
3607 4711 6.522946 ACTCCCTCCGTTTCTAAATATAAGC 58.477 40.000 0.00 0.00 0.00 3.09
3608 4712 5.861727 TCCCTCCGTTTCTAAATATAAGCC 58.138 41.667 0.00 0.00 0.00 4.35
3609 4713 5.605488 TCCCTCCGTTTCTAAATATAAGCCT 59.395 40.000 0.00 0.00 0.00 4.58
3610 4714 6.100714 TCCCTCCGTTTCTAAATATAAGCCTT 59.899 38.462 0.00 0.00 0.00 4.35
3611 4715 6.771267 CCCTCCGTTTCTAAATATAAGCCTTT 59.229 38.462 0.00 0.00 0.00 3.11
3612 4716 7.284716 CCCTCCGTTTCTAAATATAAGCCTTTT 59.715 37.037 0.00 0.00 0.00 2.27
3613 4717 8.683615 CCTCCGTTTCTAAATATAAGCCTTTTT 58.316 33.333 0.00 0.00 0.00 1.94
3628 4732 6.183309 AGCCTTTTTAAAGATTCTAGTGCG 57.817 37.500 3.84 0.00 38.28 5.34
3629 4733 5.123979 AGCCTTTTTAAAGATTCTAGTGCGG 59.876 40.000 3.84 0.00 38.28 5.69
3630 4734 5.123344 GCCTTTTTAAAGATTCTAGTGCGGA 59.877 40.000 3.84 0.00 38.28 5.54
3631 4735 6.543736 CCTTTTTAAAGATTCTAGTGCGGAC 58.456 40.000 0.00 0.00 38.28 4.79
3632 4736 6.371825 CCTTTTTAAAGATTCTAGTGCGGACT 59.628 38.462 15.78 15.78 38.28 3.85
3633 4737 7.548075 CCTTTTTAAAGATTCTAGTGCGGACTA 59.452 37.037 16.41 16.41 38.28 2.59
3634 4738 7.823149 TTTTAAAGATTCTAGTGCGGACTAC 57.177 36.000 13.29 3.51 33.21 2.73
3635 4739 6.519679 TTAAAGATTCTAGTGCGGACTACA 57.480 37.500 13.29 0.00 33.21 2.74
3636 4740 5.599999 AAAGATTCTAGTGCGGACTACAT 57.400 39.130 13.29 8.12 33.21 2.29
3637 4741 4.576216 AGATTCTAGTGCGGACTACATG 57.424 45.455 13.29 4.10 33.21 3.21
3638 4742 2.579207 TTCTAGTGCGGACTACATGC 57.421 50.000 13.29 0.00 33.21 4.06
3639 4743 0.380733 TCTAGTGCGGACTACATGCG 59.619 55.000 13.29 3.34 46.53 4.73
3640 4744 0.595053 CTAGTGCGGACTACATGCGG 60.595 60.000 13.29 0.00 43.46 5.69
3641 4745 1.033202 TAGTGCGGACTACATGCGGA 61.033 55.000 13.29 0.00 43.46 5.54
3642 4746 1.878522 GTGCGGACTACATGCGGAG 60.879 63.158 0.00 0.00 44.70 4.63
3660 4764 5.149054 CGGAGCAAAATGAGTGAATCTAC 57.851 43.478 0.00 0.00 0.00 2.59
3661 4765 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3662 4766 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3694 4798 7.249147 ACGTCTATATTACATCCGAATGTAGC 58.751 38.462 0.00 0.00 46.36 3.58
3695 4799 6.691818 CGTCTATATTACATCCGAATGTAGCC 59.308 42.308 0.00 0.00 46.36 3.93
3696 4800 6.979238 GTCTATATTACATCCGAATGTAGCCC 59.021 42.308 0.00 0.00 46.36 5.19
3697 4801 5.755409 ATATTACATCCGAATGTAGCCCA 57.245 39.130 0.00 0.00 46.36 5.36
3698 4802 4.640771 ATTACATCCGAATGTAGCCCAT 57.359 40.909 0.00 0.00 46.36 4.00
3699 4803 5.755409 ATTACATCCGAATGTAGCCCATA 57.245 39.130 0.00 0.00 46.36 2.74
3700 4804 5.755409 TTACATCCGAATGTAGCCCATAT 57.245 39.130 0.00 0.00 46.36 1.78
3701 4805 4.640771 ACATCCGAATGTAGCCCATATT 57.359 40.909 0.00 0.00 44.38 1.28
3702 4806 5.755409 ACATCCGAATGTAGCCCATATTA 57.245 39.130 0.00 0.00 44.38 0.98
3703 4807 6.121776 ACATCCGAATGTAGCCCATATTAA 57.878 37.500 0.00 0.00 44.38 1.40
3704 4808 6.539173 ACATCCGAATGTAGCCCATATTAAA 58.461 36.000 0.00 0.00 44.38 1.52
3705 4809 7.001674 ACATCCGAATGTAGCCCATATTAAAA 58.998 34.615 0.00 0.00 44.38 1.52
3706 4810 7.669722 ACATCCGAATGTAGCCCATATTAAAAT 59.330 33.333 0.00 0.00 44.38 1.82
3707 4811 7.681939 TCCGAATGTAGCCCATATTAAAATC 57.318 36.000 0.00 0.00 31.97 2.17
3708 4812 7.458397 TCCGAATGTAGCCCATATTAAAATCT 58.542 34.615 0.00 0.00 31.97 2.40
3709 4813 7.606456 TCCGAATGTAGCCCATATTAAAATCTC 59.394 37.037 0.00 0.00 31.97 2.75
3710 4814 7.390440 CCGAATGTAGCCCATATTAAAATCTCA 59.610 37.037 0.00 0.00 31.97 3.27
3711 4815 8.783093 CGAATGTAGCCCATATTAAAATCTCAA 58.217 33.333 0.00 0.00 31.97 3.02
3716 4820 9.750125 GTAGCCCATATTAAAATCTCAAAAAGG 57.250 33.333 0.00 0.00 0.00 3.11
3717 4821 8.379428 AGCCCATATTAAAATCTCAAAAAGGT 57.621 30.769 0.00 0.00 0.00 3.50
3718 4822 8.478066 AGCCCATATTAAAATCTCAAAAAGGTC 58.522 33.333 0.00 0.00 0.00 3.85
3719 4823 8.478066 GCCCATATTAAAATCTCAAAAAGGTCT 58.522 33.333 0.00 0.00 0.00 3.85
3740 4844 8.885346 AGGTCTTATATTTAGAAATGGAGGGAG 58.115 37.037 0.00 0.00 0.00 4.30
3750 4854 6.739331 AGAAATGGAGGGAGTAGAACATAG 57.261 41.667 0.00 0.00 0.00 2.23
3751 4855 6.444704 AGAAATGGAGGGAGTAGAACATAGA 58.555 40.000 0.00 0.00 0.00 1.98
3752 4856 6.903534 AGAAATGGAGGGAGTAGAACATAGAA 59.096 38.462 0.00 0.00 0.00 2.10
3753 4857 6.739331 AATGGAGGGAGTAGAACATAGAAG 57.261 41.667 0.00 0.00 0.00 2.85
3758 4862 4.404073 AGGGAGTAGAACATAGAAGTGCTG 59.596 45.833 0.00 0.00 0.00 4.41
3762 4866 6.406400 GGAGTAGAACATAGAAGTGCTGTGAT 60.406 42.308 1.11 0.00 37.90 3.06
3765 4869 3.623906 ACATAGAAGTGCTGTGATGCT 57.376 42.857 1.11 0.00 37.90 3.79
3773 4877 2.236644 AGTGCTGTGATGCTCTTCTGAT 59.763 45.455 0.00 0.00 33.68 2.90
3774 4878 3.008330 GTGCTGTGATGCTCTTCTGATT 58.992 45.455 0.00 0.00 0.00 2.57
3775 4879 4.081254 AGTGCTGTGATGCTCTTCTGATTA 60.081 41.667 0.00 0.00 33.68 1.75
3778 4882 5.296035 TGCTGTGATGCTCTTCTGATTAATG 59.704 40.000 0.00 0.00 0.00 1.90
3779 4883 5.296283 GCTGTGATGCTCTTCTGATTAATGT 59.704 40.000 0.00 0.00 0.00 2.71
3781 4885 7.627939 GCTGTGATGCTCTTCTGATTAATGTTT 60.628 37.037 0.00 0.00 0.00 2.83
3782 4886 7.532571 TGTGATGCTCTTCTGATTAATGTTTG 58.467 34.615 0.00 0.00 0.00 2.93
3784 4888 7.484007 GTGATGCTCTTCTGATTAATGTTTGTG 59.516 37.037 0.00 0.00 0.00 3.33
3785 4889 6.882610 TGCTCTTCTGATTAATGTTTGTGT 57.117 33.333 0.00 0.00 0.00 3.72
3787 4891 7.362662 TGCTCTTCTGATTAATGTTTGTGTTC 58.637 34.615 0.00 0.00 0.00 3.18
3788 4892 7.229306 TGCTCTTCTGATTAATGTTTGTGTTCT 59.771 33.333 0.00 0.00 0.00 3.01
3790 4894 9.956720 CTCTTCTGATTAATGTTTGTGTTCTTT 57.043 29.630 0.00 0.00 0.00 2.52
3791 4895 9.734620 TCTTCTGATTAATGTTTGTGTTCTTTG 57.265 29.630 0.00 0.00 0.00 2.77
3792 4896 9.520204 CTTCTGATTAATGTTTGTGTTCTTTGT 57.480 29.630 0.00 0.00 0.00 2.83
3793 4897 8.854979 TCTGATTAATGTTTGTGTTCTTTGTG 57.145 30.769 0.00 0.00 0.00 3.33
3795 4899 7.776107 TGATTAATGTTTGTGTTCTTTGTGGA 58.224 30.769 0.00 0.00 0.00 4.02
3819 4973 7.148340 GGAGAAATGACAGTCCAGAATTACTTG 60.148 40.741 0.00 0.00 0.00 3.16
3822 4976 5.808366 TGACAGTCCAGAATTACTTGTCT 57.192 39.130 0.00 0.00 31.16 3.41
3839 4993 2.371841 TGTCTATTTGCTCACACCCAGT 59.628 45.455 0.00 0.00 0.00 4.00
3852 5006 0.035439 ACCCAGTCCATTAAGCACCG 60.035 55.000 0.00 0.00 0.00 4.94
3853 5007 0.035439 CCCAGTCCATTAAGCACCGT 60.035 55.000 0.00 0.00 0.00 4.83
3902 5056 2.158769 TCTGTCCTTGAAAGCAGCTTCA 60.159 45.455 8.48 5.68 33.48 3.02
3905 5059 1.133823 TCCTTGAAAGCAGCTTCACCA 60.134 47.619 8.48 4.48 35.07 4.17
3953 5107 3.117322 TGGACCAAGAACCATTTGAAGGA 60.117 43.478 0.00 0.00 0.00 3.36
4169 5323 4.848357 AGATGGAGATAAGTTGTTGGTGG 58.152 43.478 0.00 0.00 0.00 4.61
4358 5513 5.880332 ACGATCTGCCTATTTATTGTGTGTT 59.120 36.000 0.00 0.00 0.00 3.32
4359 5514 6.374333 ACGATCTGCCTATTTATTGTGTGTTT 59.626 34.615 0.00 0.00 0.00 2.83
4373 5528 3.183754 GTGTGTTTTTGTGTGTTAGGGC 58.816 45.455 0.00 0.00 0.00 5.19
4375 5530 2.429250 GTGTTTTTGTGTGTTAGGGCCT 59.571 45.455 12.58 12.58 0.00 5.19
4442 5597 2.168106 AGTATGAGCTGAGCCAACTCTG 59.832 50.000 0.00 0.00 43.85 3.35
4483 5639 4.169508 TGTTTCACGTTTGTTTCCATGTG 58.830 39.130 0.00 0.00 0.00 3.21
4489 5645 2.286477 CGTTTGTTTCCATGTGTACGCA 60.286 45.455 12.26 12.26 0.00 5.24
4502 5658 3.501828 TGTGTACGCATTTTCTTCTGCAT 59.498 39.130 4.65 0.00 38.30 3.96
4504 5660 5.022021 GTGTACGCATTTTCTTCTGCATAC 58.978 41.667 0.39 0.00 37.51 2.39
4541 5704 9.706691 TTTTTCTATTAGTGTACTTCCTCTGTG 57.293 33.333 0.00 0.00 0.00 3.66
4542 5705 6.452494 TCTATTAGTGTACTTCCTCTGTGC 57.548 41.667 0.00 0.00 0.00 4.57
4543 5706 3.955650 TTAGTGTACTTCCTCTGTGCC 57.044 47.619 0.00 0.00 0.00 5.01
4544 5707 0.603569 AGTGTACTTCCTCTGTGCCG 59.396 55.000 0.00 0.00 0.00 5.69
4619 5825 5.643379 TGTGCAAGGAATGAATTTACTCC 57.357 39.130 0.00 0.00 0.00 3.85
4620 5826 4.462483 TGTGCAAGGAATGAATTTACTCCC 59.538 41.667 0.00 0.00 0.00 4.30
4621 5827 4.706962 GTGCAAGGAATGAATTTACTCCCT 59.293 41.667 0.00 0.00 0.00 4.20
4622 5828 4.949856 TGCAAGGAATGAATTTACTCCCTC 59.050 41.667 0.00 0.00 0.00 4.30
4623 5829 4.035675 GCAAGGAATGAATTTACTCCCTCG 59.964 45.833 0.00 0.00 0.00 4.63
4624 5830 4.423625 AGGAATGAATTTACTCCCTCGG 57.576 45.455 0.00 0.00 0.00 4.63
4625 5831 3.780850 AGGAATGAATTTACTCCCTCGGT 59.219 43.478 0.00 0.00 0.00 4.69
4626 5832 4.127907 GGAATGAATTTACTCCCTCGGTC 58.872 47.826 0.00 0.00 0.00 4.79
4627 5833 3.840124 ATGAATTTACTCCCTCGGTCC 57.160 47.619 0.00 0.00 0.00 4.46
4628 5834 1.835531 TGAATTTACTCCCTCGGTCCC 59.164 52.381 0.00 0.00 0.00 4.46
4629 5835 1.835531 GAATTTACTCCCTCGGTCCCA 59.164 52.381 0.00 0.00 0.00 4.37
4630 5836 1.961133 ATTTACTCCCTCGGTCCCAA 58.039 50.000 0.00 0.00 0.00 4.12
4631 5837 1.732117 TTTACTCCCTCGGTCCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
4632 5838 1.732117 TTACTCCCTCGGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
4633 5839 1.961133 TACTCCCTCGGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4634 5840 1.961133 ACTCCCTCGGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4635 5841 2.488836 ACTCCCTCGGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
4636 5842 3.660959 ACTCCCTCGGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
4637 5843 4.042174 ACTCCCTCGGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
4638 5844 4.102681 ACTCCCTCGGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
4639 5845 4.300345 TCCCTCGGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
4640 5846 4.722781 TCCCTCGGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
4641 5847 4.820173 CCCTCGGTCCCAAAATATAAGAAC 59.180 45.833 0.00 0.00 0.00 3.01
4642 5848 5.433526 CCTCGGTCCCAAAATATAAGAACA 58.566 41.667 0.00 0.00 0.00 3.18
4643 5849 6.062095 CCTCGGTCCCAAAATATAAGAACAT 58.938 40.000 0.00 0.00 0.00 2.71
4644 5850 6.546034 CCTCGGTCCCAAAATATAAGAACATT 59.454 38.462 0.00 0.00 0.00 2.71
4645 5851 7.255139 CCTCGGTCCCAAAATATAAGAACATTC 60.255 40.741 0.00 0.00 0.00 2.67
4646 5852 7.343357 TCGGTCCCAAAATATAAGAACATTCT 58.657 34.615 0.00 0.00 39.74 2.40
4660 5866 7.730364 AAGAACATTCTTAACACTACACTGG 57.270 36.000 5.05 0.00 45.17 4.00
4661 5867 6.827727 AGAACATTCTTAACACTACACTGGT 58.172 36.000 0.00 0.00 32.55 4.00
4662 5868 6.706270 AGAACATTCTTAACACTACACTGGTG 59.294 38.462 0.00 0.00 36.09 4.17
4663 5869 7.635089 AGAACATTCTTAACACTACACTGGTGT 60.635 37.037 11.20 11.20 40.93 4.16
4664 5870 5.989777 ACATTCTTAACACTACACTGGTGTC 59.010 40.000 9.77 0.00 45.64 3.67
4665 5871 5.601583 TTCTTAACACTACACTGGTGTCA 57.398 39.130 9.77 0.00 45.64 3.58
4666 5872 5.196341 TCTTAACACTACACTGGTGTCAG 57.804 43.478 9.77 8.65 45.64 3.51
4667 5873 4.891168 TCTTAACACTACACTGGTGTCAGA 59.109 41.667 9.77 0.00 45.64 3.27
4668 5874 5.361571 TCTTAACACTACACTGGTGTCAGAA 59.638 40.000 9.77 0.00 45.64 3.02
4669 5875 4.481368 AACACTACACTGGTGTCAGAAA 57.519 40.909 9.77 0.00 45.64 2.52
4670 5876 3.793559 ACACTACACTGGTGTCAGAAAC 58.206 45.455 9.77 0.00 43.35 2.78
4671 5877 2.794910 CACTACACTGGTGTCAGAAACG 59.205 50.000 9.77 0.00 43.74 3.60
4672 5878 2.429610 ACTACACTGGTGTCAGAAACGT 59.570 45.455 9.77 0.00 43.74 3.99
4673 5879 2.396590 ACACTGGTGTCAGAAACGTT 57.603 45.000 0.00 0.00 43.49 3.99
4674 5880 2.277084 ACACTGGTGTCAGAAACGTTC 58.723 47.619 0.00 0.00 43.49 3.95
4675 5881 2.093658 ACACTGGTGTCAGAAACGTTCT 60.094 45.455 0.00 0.00 43.49 3.01
4676 5882 2.936498 CACTGGTGTCAGAAACGTTCTT 59.064 45.455 0.00 0.00 43.49 2.52
4677 5883 4.116961 CACTGGTGTCAGAAACGTTCTTA 58.883 43.478 0.00 0.00 43.49 2.10
4678 5884 4.750098 CACTGGTGTCAGAAACGTTCTTAT 59.250 41.667 0.00 0.00 43.49 1.73
4679 5885 5.924254 CACTGGTGTCAGAAACGTTCTTATA 59.076 40.000 0.00 0.00 43.49 0.98
4680 5886 6.590292 CACTGGTGTCAGAAACGTTCTTATAT 59.410 38.462 0.00 0.00 43.49 0.86
4681 5887 7.117812 CACTGGTGTCAGAAACGTTCTTATATT 59.882 37.037 0.00 0.00 43.49 1.28
4682 5888 8.308931 ACTGGTGTCAGAAACGTTCTTATATTA 58.691 33.333 0.00 0.00 43.49 0.98
4683 5889 9.314321 CTGGTGTCAGAAACGTTCTTATATTAT 57.686 33.333 0.00 0.00 43.49 1.28
4684 5890 9.093970 TGGTGTCAGAAACGTTCTTATATTATG 57.906 33.333 0.00 0.00 38.11 1.90
4685 5891 8.548721 GGTGTCAGAAACGTTCTTATATTATGG 58.451 37.037 0.00 0.00 38.11 2.74
4686 5892 8.548721 GTGTCAGAAACGTTCTTATATTATGGG 58.451 37.037 0.00 0.00 38.11 4.00
4687 5893 8.479689 TGTCAGAAACGTTCTTATATTATGGGA 58.520 33.333 0.00 0.00 38.11 4.37
4688 5894 8.762426 GTCAGAAACGTTCTTATATTATGGGAC 58.238 37.037 0.00 0.00 38.11 4.46
4689 5895 7.650504 TCAGAAACGTTCTTATATTATGGGACG 59.349 37.037 0.00 9.33 38.11 4.79
4690 5896 7.650504 CAGAAACGTTCTTATATTATGGGACGA 59.349 37.037 0.00 0.00 38.11 4.20
4691 5897 8.199449 AGAAACGTTCTTATATTATGGGACGAA 58.801 33.333 0.00 0.00 36.36 3.85
4692 5898 7.941795 AACGTTCTTATATTATGGGACGAAG 57.058 36.000 14.76 0.00 0.00 3.79
4693 5899 6.453092 ACGTTCTTATATTATGGGACGAAGG 58.547 40.000 14.76 0.00 0.00 3.46
4694 5900 6.266103 ACGTTCTTATATTATGGGACGAAGGA 59.734 38.462 14.76 0.00 0.00 3.36
4695 5901 7.149973 CGTTCTTATATTATGGGACGAAGGAA 58.850 38.462 0.00 0.00 0.00 3.36
4696 5902 7.328737 CGTTCTTATATTATGGGACGAAGGAAG 59.671 40.741 0.00 0.00 0.00 3.46
4697 5903 7.850935 TCTTATATTATGGGACGAAGGAAGT 57.149 36.000 0.00 0.00 0.00 3.01
4698 5904 8.945195 TCTTATATTATGGGACGAAGGAAGTA 57.055 34.615 0.00 0.00 0.00 2.24
4699 5905 8.800332 TCTTATATTATGGGACGAAGGAAGTAC 58.200 37.037 0.00 0.00 0.00 2.73
4700 5906 8.716674 TTATATTATGGGACGAAGGAAGTACT 57.283 34.615 0.00 0.00 0.00 2.73
4759 5965 3.181449 TGGCTAATCGCAGGGCTAAATAA 60.181 43.478 0.00 0.00 41.67 1.40
4785 5991 1.450312 CACTCGGGCCTGTTGATCC 60.450 63.158 12.43 0.00 0.00 3.36
4786 5992 2.202932 CTCGGGCCTGTTGATCCG 60.203 66.667 12.43 0.00 43.42 4.18
4787 5993 3.740128 CTCGGGCCTGTTGATCCGG 62.740 68.421 12.43 0.00 42.44 5.14
4829 6035 9.932207 TTGATTAAAAATGTTGCATCAAGATCT 57.068 25.926 0.75 0.00 29.11 2.75
4857 6070 7.541122 AATTATTTACTTTCGACCTCTCTGC 57.459 36.000 0.00 0.00 0.00 4.26
4858 6071 4.537135 ATTTACTTTCGACCTCTCTGCA 57.463 40.909 0.00 0.00 0.00 4.41
4859 6072 4.537135 TTTACTTTCGACCTCTCTGCAT 57.463 40.909 0.00 0.00 0.00 3.96
4860 6073 5.654603 TTTACTTTCGACCTCTCTGCATA 57.345 39.130 0.00 0.00 0.00 3.14
4861 6074 5.654603 TTACTTTCGACCTCTCTGCATAA 57.345 39.130 0.00 0.00 0.00 1.90
4862 6075 4.744795 ACTTTCGACCTCTCTGCATAAT 57.255 40.909 0.00 0.00 0.00 1.28
4863 6076 5.091261 ACTTTCGACCTCTCTGCATAATT 57.909 39.130 0.00 0.00 0.00 1.40
4864 6077 6.222038 ACTTTCGACCTCTCTGCATAATTA 57.778 37.500 0.00 0.00 0.00 1.40
4865 6078 6.640518 ACTTTCGACCTCTCTGCATAATTAA 58.359 36.000 0.00 0.00 0.00 1.40
4866 6079 6.758886 ACTTTCGACCTCTCTGCATAATTAAG 59.241 38.462 0.00 0.00 0.00 1.85
4879 6092 9.341078 TCTGCATAATTAAGATTAAGATGCACA 57.659 29.630 21.83 15.08 43.50 4.57
4894 6107 3.415457 TGCACATATCACACACAAGGA 57.585 42.857 0.00 0.00 0.00 3.36
4895 6108 3.337358 TGCACATATCACACACAAGGAG 58.663 45.455 0.00 0.00 0.00 3.69
4896 6109 3.007831 TGCACATATCACACACAAGGAGA 59.992 43.478 0.00 0.00 0.00 3.71
4897 6110 4.002982 GCACATATCACACACAAGGAGAA 58.997 43.478 0.00 0.00 0.00 2.87
4898 6111 4.142816 GCACATATCACACACAAGGAGAAC 60.143 45.833 0.00 0.00 0.00 3.01
4900 6113 5.469760 CACATATCACACACAAGGAGAACAA 59.530 40.000 0.00 0.00 0.00 2.83
4901 6114 6.017192 CACATATCACACACAAGGAGAACAAA 60.017 38.462 0.00 0.00 0.00 2.83
4902 6115 6.545666 ACATATCACACACAAGGAGAACAAAA 59.454 34.615 0.00 0.00 0.00 2.44
4903 6116 5.913137 ATCACACACAAGGAGAACAAAAA 57.087 34.783 0.00 0.00 0.00 1.94
4904 6117 5.054390 TCACACACAAGGAGAACAAAAAC 57.946 39.130 0.00 0.00 0.00 2.43
4905 6118 4.520874 TCACACACAAGGAGAACAAAAACA 59.479 37.500 0.00 0.00 0.00 2.83
4906 6119 5.184864 TCACACACAAGGAGAACAAAAACAT 59.815 36.000 0.00 0.00 0.00 2.71
4907 6120 5.868801 CACACACAAGGAGAACAAAAACATT 59.131 36.000 0.00 0.00 0.00 2.71
4908 6121 7.032580 CACACACAAGGAGAACAAAAACATTA 58.967 34.615 0.00 0.00 0.00 1.90
4909 6122 7.009174 CACACACAAGGAGAACAAAAACATTAC 59.991 37.037 0.00 0.00 0.00 1.89
4910 6123 7.093945 ACACACAAGGAGAACAAAAACATTACT 60.094 33.333 0.00 0.00 0.00 2.24
4911 6124 8.402472 CACACAAGGAGAACAAAAACATTACTA 58.598 33.333 0.00 0.00 0.00 1.82
4912 6125 8.621286 ACACAAGGAGAACAAAAACATTACTAG 58.379 33.333 0.00 0.00 0.00 2.57
4913 6126 8.076178 CACAAGGAGAACAAAAACATTACTAGG 58.924 37.037 0.00 0.00 0.00 3.02
4914 6127 7.778382 ACAAGGAGAACAAAAACATTACTAGGT 59.222 33.333 0.00 0.00 0.00 3.08
4915 6128 9.280174 CAAGGAGAACAAAAACATTACTAGGTA 57.720 33.333 0.00 0.00 0.00 3.08
4916 6129 9.856162 AAGGAGAACAAAAACATTACTAGGTAA 57.144 29.630 0.00 0.00 32.36 2.85
4917 6130 9.281371 AGGAGAACAAAAACATTACTAGGTAAC 57.719 33.333 0.00 0.00 30.49 2.50
4918 6131 9.059260 GGAGAACAAAAACATTACTAGGTAACA 57.941 33.333 0.00 0.00 41.41 2.41
4923 6136 8.953313 ACAAAAACATTACTAGGTAACATAGGC 58.047 33.333 0.00 0.00 41.41 3.93
4924 6137 9.174166 CAAAAACATTACTAGGTAACATAGGCT 57.826 33.333 0.00 0.00 41.41 4.58
4925 6138 8.732746 AAAACATTACTAGGTAACATAGGCTG 57.267 34.615 0.00 0.00 41.41 4.85
4926 6139 5.855045 ACATTACTAGGTAACATAGGCTGC 58.145 41.667 0.00 0.00 41.41 5.25
4927 6140 4.579454 TTACTAGGTAACATAGGCTGCG 57.421 45.455 0.00 0.00 41.41 5.18
4928 6141 2.662866 ACTAGGTAACATAGGCTGCGA 58.337 47.619 0.00 0.00 41.41 5.10
4929 6142 2.361438 ACTAGGTAACATAGGCTGCGAC 59.639 50.000 0.00 0.00 41.41 5.19
4930 6143 1.191535 AGGTAACATAGGCTGCGACA 58.808 50.000 0.00 0.00 41.41 4.35
4941 6154 6.095440 ACATAGGCTGCGACAAAAAGAATAAT 59.905 34.615 0.00 0.00 0.00 1.28
4945 6158 3.497118 TGCGACAAAAAGAATAATGCCG 58.503 40.909 0.00 0.00 0.00 5.69
4957 6170 5.542779 AGAATAATGCCGTCTAAGGTGATC 58.457 41.667 0.00 0.00 0.00 2.92
5022 6235 7.939784 AAACTTTTCTTGACTACCTGTTTCT 57.060 32.000 0.00 0.00 0.00 2.52
5023 6236 7.555306 AACTTTTCTTGACTACCTGTTTCTC 57.445 36.000 0.00 0.00 0.00 2.87
5024 6237 6.650120 ACTTTTCTTGACTACCTGTTTCTCA 58.350 36.000 0.00 0.00 0.00 3.27
5025 6238 7.110155 ACTTTTCTTGACTACCTGTTTCTCAA 58.890 34.615 0.00 0.00 0.00 3.02
5026 6239 7.610305 ACTTTTCTTGACTACCTGTTTCTCAAA 59.390 33.333 0.00 0.00 0.00 2.69
5027 6240 8.519799 TTTTCTTGACTACCTGTTTCTCAAAT 57.480 30.769 0.00 0.00 0.00 2.32
5028 6241 7.730364 TTCTTGACTACCTGTTTCTCAAATC 57.270 36.000 0.00 0.00 0.00 2.17
5029 6242 6.231211 TCTTGACTACCTGTTTCTCAAATCC 58.769 40.000 0.00 0.00 0.00 3.01
5030 6243 5.560722 TGACTACCTGTTTCTCAAATCCA 57.439 39.130 0.00 0.00 0.00 3.41
5031 6244 5.305585 TGACTACCTGTTTCTCAAATCCAC 58.694 41.667 0.00 0.00 0.00 4.02
5032 6245 5.163248 TGACTACCTGTTTCTCAAATCCACA 60.163 40.000 0.00 0.00 0.00 4.17
5033 6246 5.880901 ACTACCTGTTTCTCAAATCCACAT 58.119 37.500 0.00 0.00 0.00 3.21
5034 6247 6.306987 ACTACCTGTTTCTCAAATCCACATT 58.693 36.000 0.00 0.00 0.00 2.71
5035 6248 7.458397 ACTACCTGTTTCTCAAATCCACATTA 58.542 34.615 0.00 0.00 0.00 1.90
5036 6249 8.109634 ACTACCTGTTTCTCAAATCCACATTAT 58.890 33.333 0.00 0.00 0.00 1.28
5037 6250 7.781324 ACCTGTTTCTCAAATCCACATTATT 57.219 32.000 0.00 0.00 0.00 1.40
5038 6251 8.877864 ACCTGTTTCTCAAATCCACATTATTA 57.122 30.769 0.00 0.00 0.00 0.98
5039 6252 9.479549 ACCTGTTTCTCAAATCCACATTATTAT 57.520 29.630 0.00 0.00 0.00 1.28
5078 6291 9.781834 TTTTATCATTTCTACATAGGCAAAACG 57.218 29.630 0.00 0.00 0.00 3.60
5079 6292 5.811399 TCATTTCTACATAGGCAAAACGG 57.189 39.130 0.00 0.00 0.00 4.44
5080 6293 4.095782 TCATTTCTACATAGGCAAAACGGC 59.904 41.667 0.00 0.00 41.61 5.68
5089 6302 3.058115 GCAAAACGGCCAACAAAGT 57.942 47.368 2.24 0.00 0.00 2.66
5090 6303 0.649993 GCAAAACGGCCAACAAAGTG 59.350 50.000 2.24 0.00 0.00 3.16
5091 6304 2.003196 CAAAACGGCCAACAAAGTGT 57.997 45.000 2.24 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
138 143 4.929819 TCCAAGGTTTAAAAAGGTGAGC 57.070 40.909 0.00 0.00 0.00 4.26
197 1105 0.724549 TTTGTCGATCGCGGATTTGG 59.275 50.000 11.09 0.00 38.28 3.28
204 1112 1.983605 AGTTGTAGTTTGTCGATCGCG 59.016 47.619 11.09 0.00 39.35 5.87
207 1115 6.097356 TGGTCATAGTTGTAGTTTGTCGATC 58.903 40.000 0.00 0.00 0.00 3.69
264 1172 5.528690 TCCTTTTTGAGATCTATTCATGCCG 59.471 40.000 0.00 0.00 0.00 5.69
316 1224 5.927689 TGTGTATGAATAAAACCGACTTCGT 59.072 36.000 0.00 0.00 37.74 3.85
317 1225 6.397831 TGTGTATGAATAAAACCGACTTCG 57.602 37.500 0.00 0.00 39.44 3.79
318 1226 8.197988 AGATGTGTATGAATAAAACCGACTTC 57.802 34.615 0.00 0.00 0.00 3.01
319 1227 9.661563 TTAGATGTGTATGAATAAAACCGACTT 57.338 29.630 0.00 0.00 0.00 3.01
443 1351 1.591158 CGTAAAATCCCGGTCGACATG 59.409 52.381 18.91 9.02 0.00 3.21
446 1354 1.994916 TTCGTAAAATCCCGGTCGAC 58.005 50.000 7.13 7.13 0.00 4.20
452 1360 1.595794 CCGGTGATTCGTAAAATCCCG 59.404 52.381 15.03 15.03 38.76 5.14
454 1362 2.011222 TGCCGGTGATTCGTAAAATCC 58.989 47.619 1.90 0.00 0.00 3.01
473 1381 2.678336 GGGTTTGCTAATTCTCGGTCTG 59.322 50.000 0.00 0.00 0.00 3.51
478 1386 3.246226 CAGATCGGGTTTGCTAATTCTCG 59.754 47.826 0.00 0.00 0.00 4.04
536 1447 6.583912 ATGTGTGTGTATGCGAGTATTTAC 57.416 37.500 0.00 0.00 0.00 2.01
546 1457 3.370978 GGTGAGTGTATGTGTGTGTATGC 59.629 47.826 0.00 0.00 0.00 3.14
554 1465 3.390135 CTGTTTCGGTGAGTGTATGTGT 58.610 45.455 0.00 0.00 0.00 3.72
561 1472 1.673033 CCTAGGCTGTTTCGGTGAGTG 60.673 57.143 0.00 0.00 0.00 3.51
616 1527 9.807649 CAAAAGTAAAGCCTTTATATTGCAGAT 57.192 29.630 0.00 0.00 33.62 2.90
617 1528 8.802267 ACAAAAGTAAAGCCTTTATATTGCAGA 58.198 29.630 14.33 0.00 33.62 4.26
618 1529 8.863049 CACAAAAGTAAAGCCTTTATATTGCAG 58.137 33.333 14.33 7.92 33.62 4.41
619 1530 8.580720 TCACAAAAGTAAAGCCTTTATATTGCA 58.419 29.630 14.33 0.00 33.62 4.08
620 1531 8.980143 TCACAAAAGTAAAGCCTTTATATTGC 57.020 30.769 14.33 0.00 33.62 3.56
706 1619 2.159382 TGAGTGGGATTTTCGGAAAGC 58.841 47.619 3.09 0.00 0.00 3.51
863 1776 3.866582 GGGGCGGATCTGGGACTG 61.867 72.222 3.14 0.00 0.00 3.51
972 1886 4.033776 CCTCTTCTTGCCCCCGCA 62.034 66.667 0.00 0.00 45.49 5.69
1228 2142 4.452733 GACACGAAGGAGGGGGCG 62.453 72.222 0.00 0.00 0.00 6.13
1229 2143 4.097361 GGACACGAAGGAGGGGGC 62.097 72.222 0.00 0.00 0.00 5.80
1234 2148 1.443872 CGAACCGGACACGAAGGAG 60.444 63.158 9.46 0.00 44.60 3.69
1261 2190 3.615937 CGTCAGATCACAGATTTCCACAG 59.384 47.826 0.00 0.00 0.00 3.66
1304 2233 1.289109 CGTCGAACACCTGGCGAAAT 61.289 55.000 0.00 0.00 35.66 2.17
1787 2716 2.998316 AGAAGATTGCTACCTCCTGC 57.002 50.000 0.00 0.00 0.00 4.85
1802 2731 4.319549 GGCAGTTTGTTCGGTCTAAAGAAG 60.320 45.833 0.00 0.00 0.00 2.85
1824 2753 7.902087 TCTAAATTTCCATGTTTTGTAAGGGG 58.098 34.615 0.00 0.00 0.00 4.79
1835 2764 7.177216 TCACTTGCTCAATCTAAATTTCCATGT 59.823 33.333 0.00 0.00 0.00 3.21
2002 2931 1.603802 ACTTGCTTGACATGTGGAACG 59.396 47.619 1.15 0.00 42.39 3.95
2049 2978 7.422399 TCCACAAAAGAAGCTACAAATTACAC 58.578 34.615 0.00 0.00 0.00 2.90
2078 3024 7.986562 ACCAAAGAGAAAGAGACAACTTTAAC 58.013 34.615 0.00 0.00 39.71 2.01
2080 3026 9.847224 ATTACCAAAGAGAAAGAGACAACTTTA 57.153 29.630 0.00 0.00 39.71 1.85
2324 3273 5.514204 CAGAGCTTGCTGCATACATAAAAAC 59.486 40.000 1.84 0.00 45.94 2.43
2629 3579 7.446625 AGAAAGCACACAGAACTATGAGAAAAT 59.553 33.333 0.00 0.00 0.00 1.82
2689 3641 4.072839 ACAGGCATGATAGATGCTCAATG 58.927 43.478 4.84 4.15 44.02 2.82
2695 3647 2.701073 GCAACAGGCATGATAGATGC 57.299 50.000 4.84 3.81 43.97 3.91
2708 3660 5.824624 AGGTATGTGATCAAATAGGCAACAG 59.175 40.000 5.79 0.00 41.41 3.16
2740 3692 4.022242 TCCTAATCTACGTCTTAGCATGCC 60.022 45.833 15.66 0.00 0.00 4.40
2784 3736 3.834231 ACAAAAGGCTATCCAAATGCTGT 59.166 39.130 0.00 0.00 33.74 4.40
2785 3737 4.460948 ACAAAAGGCTATCCAAATGCTG 57.539 40.909 0.00 0.00 33.74 4.41
2875 3828 6.555360 AGGAATGGGAGTAGGTACTTGATAAG 59.445 42.308 0.00 0.00 41.75 1.73
2901 3854 4.843728 TCTTCTCACCCATAACAATGGAC 58.156 43.478 5.97 0.00 44.39 4.02
2914 3898 2.289756 GGTTCAGAGGGTTCTTCTCACC 60.290 54.545 0.00 0.00 33.92 4.02
2919 3903 0.321996 AGCGGTTCAGAGGGTTCTTC 59.678 55.000 0.00 0.00 0.00 2.87
3001 3985 1.533625 GGTGCCAGCAAGTGTGATAA 58.466 50.000 0.00 0.00 0.00 1.75
3035 4019 8.762645 TGATTCCAGAGTATAACATTCTGAACT 58.237 33.333 2.49 0.00 42.19 3.01
3074 4063 8.509690 CAAACTGAGATCATCAACATAACACTT 58.490 33.333 0.00 0.00 37.52 3.16
3079 4068 8.797350 ATGTCAAACTGAGATCATCAACATAA 57.203 30.769 0.00 0.00 34.23 1.90
3080 4069 8.797350 AATGTCAAACTGAGATCATCAACATA 57.203 30.769 0.00 0.00 34.67 2.29
3081 4070 7.148120 GGAATGTCAAACTGAGATCATCAACAT 60.148 37.037 0.00 0.52 36.41 2.71
3082 4071 6.149973 GGAATGTCAAACTGAGATCATCAACA 59.850 38.462 0.00 0.00 37.52 3.33
3084 4073 6.479006 AGGAATGTCAAACTGAGATCATCAA 58.521 36.000 0.00 0.00 37.52 2.57
3085 4074 6.058553 AGGAATGTCAAACTGAGATCATCA 57.941 37.500 0.00 0.00 28.11 3.07
3086 4075 6.111382 TGAGGAATGTCAAACTGAGATCATC 58.889 40.000 0.00 0.00 28.11 2.92
3087 4076 6.058553 TGAGGAATGTCAAACTGAGATCAT 57.941 37.500 0.00 0.00 28.11 2.45
3088 4077 5.012458 ACTGAGGAATGTCAAACTGAGATCA 59.988 40.000 0.00 0.00 28.11 2.92
3089 4078 5.486526 ACTGAGGAATGTCAAACTGAGATC 58.513 41.667 0.00 0.00 28.11 2.75
3090 4079 5.012458 TGACTGAGGAATGTCAAACTGAGAT 59.988 40.000 0.00 0.00 39.82 2.75
3091 4080 4.344968 TGACTGAGGAATGTCAAACTGAGA 59.655 41.667 0.00 0.00 39.82 3.27
3132 4122 9.074869 CGCAATAAGCATGATTCACAATCACAC 62.075 40.741 0.00 0.00 43.19 3.82
3259 4266 9.683069 GAAATATACAATAAAGGTGATGCAAGG 57.317 33.333 0.00 0.00 0.00 3.61
3277 4284 9.346725 CTTTGAACCAAAAGCTCTGAAATATAC 57.653 33.333 0.00 0.00 32.75 1.47
3317 4324 6.785488 TTTGATTGATCCGCAGTCATATAC 57.215 37.500 0.00 0.00 41.99 1.47
3328 4335 9.579768 TTAAATGGTTACAATTTGATTGATCCG 57.420 29.630 7.89 0.00 42.83 4.18
3360 4371 0.469705 ATGCCCAAGTTTGAGCCACA 60.470 50.000 0.00 0.00 30.03 4.17
3367 4378 3.612479 GCACAGAACTATGCCCAAGTTTG 60.612 47.826 0.00 0.00 37.31 2.93
3411 4424 4.807304 GCATGGGAATTCAGCTAAACATTG 59.193 41.667 7.93 0.00 0.00 2.82
3433 4446 1.202698 CCCAGAGTAAGGGCATACAGC 60.203 57.143 3.06 0.00 39.96 4.40
3458 4471 7.093322 AGCATACCATGAAAGAAGACAAATC 57.907 36.000 0.00 0.00 0.00 2.17
3461 4474 6.899393 AAAGCATACCATGAAAGAAGACAA 57.101 33.333 0.00 0.00 0.00 3.18
3470 4483 7.523293 TTTCTTCTCAAAAGCATACCATGAA 57.477 32.000 0.00 0.00 0.00 2.57
3498 4511 5.643379 AAAACCAATCAAGCATATCGTGT 57.357 34.783 0.00 0.00 0.00 4.49
3511 4533 6.402442 GCAGATGCCAAATGTAAAAACCAATC 60.402 38.462 0.00 0.00 34.31 2.67
3514 4536 4.202295 TGCAGATGCCAAATGTAAAAACCA 60.202 37.500 1.72 0.00 41.18 3.67
3518 4540 6.228995 TCAAATGCAGATGCCAAATGTAAAA 58.771 32.000 1.72 0.00 41.18 1.52
3566 4670 4.641094 AGGGAGTACACTTCTAATCACTCG 59.359 45.833 0.00 0.00 34.57 4.18
3569 4673 4.202030 CGGAGGGAGTACACTTCTAATCAC 60.202 50.000 0.00 0.00 0.00 3.06
3570 4674 3.952323 CGGAGGGAGTACACTTCTAATCA 59.048 47.826 0.00 0.00 0.00 2.57
3571 4675 3.952967 ACGGAGGGAGTACACTTCTAATC 59.047 47.826 0.00 0.00 0.00 1.75
3572 4676 3.978610 ACGGAGGGAGTACACTTCTAAT 58.021 45.455 0.00 0.00 0.00 1.73
3573 4677 3.446442 ACGGAGGGAGTACACTTCTAA 57.554 47.619 0.00 0.00 0.00 2.10
3574 4678 3.446442 AACGGAGGGAGTACACTTCTA 57.554 47.619 0.00 0.00 0.00 2.10
3575 4679 2.305858 AACGGAGGGAGTACACTTCT 57.694 50.000 0.00 0.00 0.00 2.85
3576 4680 2.561858 AGAAACGGAGGGAGTACACTTC 59.438 50.000 0.00 0.00 0.00 3.01
3577 4681 2.606378 AGAAACGGAGGGAGTACACTT 58.394 47.619 0.00 0.00 0.00 3.16
3578 4682 2.305858 AGAAACGGAGGGAGTACACT 57.694 50.000 0.00 0.00 0.00 3.55
3579 4683 4.525912 TTTAGAAACGGAGGGAGTACAC 57.474 45.455 0.00 0.00 0.00 2.90
3580 4684 8.537728 TTATATTTAGAAACGGAGGGAGTACA 57.462 34.615 0.00 0.00 0.00 2.90
3581 4685 7.598118 GCTTATATTTAGAAACGGAGGGAGTAC 59.402 40.741 0.00 0.00 0.00 2.73
3582 4686 7.256083 GGCTTATATTTAGAAACGGAGGGAGTA 60.256 40.741 0.00 0.00 0.00 2.59
3583 4687 6.464039 GGCTTATATTTAGAAACGGAGGGAGT 60.464 42.308 0.00 0.00 0.00 3.85
3584 4688 5.932883 GGCTTATATTTAGAAACGGAGGGAG 59.067 44.000 0.00 0.00 0.00 4.30
3585 4689 5.605488 AGGCTTATATTTAGAAACGGAGGGA 59.395 40.000 0.00 0.00 0.00 4.20
3586 4690 5.866207 AGGCTTATATTTAGAAACGGAGGG 58.134 41.667 0.00 0.00 0.00 4.30
3587 4691 7.803279 AAAGGCTTATATTTAGAAACGGAGG 57.197 36.000 0.00 0.00 0.00 4.30
3602 4706 8.398665 CGCACTAGAATCTTTAAAAAGGCTTAT 58.601 33.333 0.00 0.00 36.67 1.73
3603 4707 7.148306 CCGCACTAGAATCTTTAAAAAGGCTTA 60.148 37.037 0.00 0.00 36.67 3.09
3604 4708 6.349363 CCGCACTAGAATCTTTAAAAAGGCTT 60.349 38.462 0.00 0.00 36.67 4.35
3605 4709 5.123979 CCGCACTAGAATCTTTAAAAAGGCT 59.876 40.000 0.00 0.00 36.67 4.58
3606 4710 5.123344 TCCGCACTAGAATCTTTAAAAAGGC 59.877 40.000 0.00 0.00 36.67 4.35
3607 4711 6.371825 AGTCCGCACTAGAATCTTTAAAAAGG 59.628 38.462 0.00 0.00 36.67 3.11
3608 4712 7.365840 AGTCCGCACTAGAATCTTTAAAAAG 57.634 36.000 0.00 0.00 37.36 2.27
3609 4713 7.874016 TGTAGTCCGCACTAGAATCTTTAAAAA 59.126 33.333 0.00 0.00 35.67 1.94
3610 4714 7.380536 TGTAGTCCGCACTAGAATCTTTAAAA 58.619 34.615 0.00 0.00 35.67 1.52
3611 4715 6.927416 TGTAGTCCGCACTAGAATCTTTAAA 58.073 36.000 0.00 0.00 35.67 1.52
3612 4716 6.519679 TGTAGTCCGCACTAGAATCTTTAA 57.480 37.500 0.00 0.00 35.67 1.52
3613 4717 6.504398 CATGTAGTCCGCACTAGAATCTTTA 58.496 40.000 0.00 0.00 35.67 1.85
3614 4718 5.352284 CATGTAGTCCGCACTAGAATCTTT 58.648 41.667 0.00 0.00 35.67 2.52
3615 4719 4.737946 GCATGTAGTCCGCACTAGAATCTT 60.738 45.833 0.00 0.00 35.67 2.40
3616 4720 3.243569 GCATGTAGTCCGCACTAGAATCT 60.244 47.826 0.00 0.00 35.67 2.40
3617 4721 3.053455 GCATGTAGTCCGCACTAGAATC 58.947 50.000 0.00 0.00 35.67 2.52
3618 4722 2.543861 CGCATGTAGTCCGCACTAGAAT 60.544 50.000 0.00 0.00 35.67 2.40
3619 4723 1.202256 CGCATGTAGTCCGCACTAGAA 60.202 52.381 0.00 0.00 35.67 2.10
3620 4724 0.380733 CGCATGTAGTCCGCACTAGA 59.619 55.000 0.00 0.00 35.67 2.43
3621 4725 0.595053 CCGCATGTAGTCCGCACTAG 60.595 60.000 0.00 0.00 35.67 2.57
3622 4726 1.033202 TCCGCATGTAGTCCGCACTA 61.033 55.000 0.00 0.00 33.62 2.74
3623 4727 2.184322 CCGCATGTAGTCCGCACT 59.816 61.111 0.00 0.00 36.55 4.40
3624 4728 1.878522 CTCCGCATGTAGTCCGCAC 60.879 63.158 0.00 0.00 0.00 5.34
3625 4729 2.494445 CTCCGCATGTAGTCCGCA 59.506 61.111 0.00 0.00 0.00 5.69
3626 4730 2.962253 GCTCCGCATGTAGTCCGC 60.962 66.667 0.00 0.00 0.00 5.54
3627 4731 0.739462 TTTGCTCCGCATGTAGTCCG 60.739 55.000 0.00 0.00 38.76 4.79
3628 4732 1.448985 TTTTGCTCCGCATGTAGTCC 58.551 50.000 0.00 0.00 38.76 3.85
3629 4733 2.677836 TCATTTTGCTCCGCATGTAGTC 59.322 45.455 0.00 0.00 38.76 2.59
3630 4734 2.679837 CTCATTTTGCTCCGCATGTAGT 59.320 45.455 0.00 0.00 38.76 2.73
3631 4735 2.679837 ACTCATTTTGCTCCGCATGTAG 59.320 45.455 0.00 0.00 38.76 2.74
3632 4736 2.419673 CACTCATTTTGCTCCGCATGTA 59.580 45.455 0.00 0.00 38.76 2.29
3633 4737 1.200716 CACTCATTTTGCTCCGCATGT 59.799 47.619 0.00 0.00 38.76 3.21
3634 4738 1.469703 TCACTCATTTTGCTCCGCATG 59.530 47.619 0.00 0.00 38.76 4.06
3635 4739 1.825090 TCACTCATTTTGCTCCGCAT 58.175 45.000 0.00 0.00 38.76 4.73
3636 4740 1.603456 TTCACTCATTTTGCTCCGCA 58.397 45.000 0.00 0.00 36.47 5.69
3637 4741 2.421424 AGATTCACTCATTTTGCTCCGC 59.579 45.455 0.00 0.00 0.00 5.54
3638 4742 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3639 4743 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3640 4744 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3641 4745 9.890629 TTATAGTGTAGATTCACTCATTTTGCT 57.109 29.630 2.59 0.00 45.79 3.91
3648 4752 9.557061 AGACGTATTATAGTGTAGATTCACTCA 57.443 33.333 2.59 0.00 45.79 3.41
3668 4772 8.393366 GCTACATTCGGATGTAATATAGACGTA 58.607 37.037 17.19 0.00 45.50 3.57
3669 4773 7.249147 GCTACATTCGGATGTAATATAGACGT 58.751 38.462 17.19 0.00 45.50 4.34
3670 4774 6.691818 GGCTACATTCGGATGTAATATAGACG 59.308 42.308 17.19 4.79 45.50 4.18
3671 4775 6.979238 GGGCTACATTCGGATGTAATATAGAC 59.021 42.308 17.19 9.23 45.50 2.59
3672 4776 6.666113 TGGGCTACATTCGGATGTAATATAGA 59.334 38.462 17.19 0.00 45.50 1.98
3673 4777 6.873997 TGGGCTACATTCGGATGTAATATAG 58.126 40.000 17.19 8.43 45.50 1.31
3674 4778 6.860790 TGGGCTACATTCGGATGTAATATA 57.139 37.500 17.19 2.78 45.50 0.86
3675 4779 5.755409 TGGGCTACATTCGGATGTAATAT 57.245 39.130 17.19 0.00 45.50 1.28
3676 4780 5.755409 ATGGGCTACATTCGGATGTAATA 57.245 39.130 17.19 5.02 45.50 0.98
3677 4781 4.640771 ATGGGCTACATTCGGATGTAAT 57.359 40.909 17.19 5.57 45.50 1.89
3678 4782 5.755409 ATATGGGCTACATTCGGATGTAA 57.245 39.130 17.19 3.33 45.50 2.41
3679 4783 5.755409 AATATGGGCTACATTCGGATGTA 57.245 39.130 15.76 15.76 44.51 2.29
3681 4785 7.447374 TTTTAATATGGGCTACATTCGGATG 57.553 36.000 0.88 0.88 41.03 3.51
3682 4786 8.109634 AGATTTTAATATGGGCTACATTCGGAT 58.890 33.333 0.01 0.00 41.03 4.18
3683 4787 7.458397 AGATTTTAATATGGGCTACATTCGGA 58.542 34.615 0.01 0.00 41.03 4.55
3684 4788 7.390440 TGAGATTTTAATATGGGCTACATTCGG 59.610 37.037 0.01 0.00 41.03 4.30
3685 4789 8.322906 TGAGATTTTAATATGGGCTACATTCG 57.677 34.615 0.01 0.00 41.03 3.34
3690 4794 9.750125 CCTTTTTGAGATTTTAATATGGGCTAC 57.250 33.333 0.00 0.00 0.00 3.58
3691 4795 9.487442 ACCTTTTTGAGATTTTAATATGGGCTA 57.513 29.630 0.00 0.00 0.00 3.93
3692 4796 8.379428 ACCTTTTTGAGATTTTAATATGGGCT 57.621 30.769 0.00 0.00 0.00 5.19
3693 4797 8.478066 AGACCTTTTTGAGATTTTAATATGGGC 58.522 33.333 0.00 0.00 0.00 5.36
3712 4816 9.868160 CCCTCCATTTCTAAATATAAGACCTTT 57.132 33.333 0.00 0.00 0.00 3.11
3713 4817 9.237706 TCCCTCCATTTCTAAATATAAGACCTT 57.762 33.333 0.00 0.00 0.00 3.50
3714 4818 8.814448 TCCCTCCATTTCTAAATATAAGACCT 57.186 34.615 0.00 0.00 0.00 3.85
3715 4819 8.661345 ACTCCCTCCATTTCTAAATATAAGACC 58.339 37.037 0.00 0.00 0.00 3.85
3721 4825 9.225682 TGTTCTACTCCCTCCATTTCTAAATAT 57.774 33.333 0.00 0.00 0.00 1.28
3722 4826 8.618240 TGTTCTACTCCCTCCATTTCTAAATA 57.382 34.615 0.00 0.00 0.00 1.40
3723 4827 7.510675 TGTTCTACTCCCTCCATTTCTAAAT 57.489 36.000 0.00 0.00 0.00 1.40
3724 4828 6.945636 TGTTCTACTCCCTCCATTTCTAAA 57.054 37.500 0.00 0.00 0.00 1.85
3725 4829 8.065627 TCTATGTTCTACTCCCTCCATTTCTAA 58.934 37.037 0.00 0.00 0.00 2.10
3726 4830 7.592736 TCTATGTTCTACTCCCTCCATTTCTA 58.407 38.462 0.00 0.00 0.00 2.10
3727 4831 6.444704 TCTATGTTCTACTCCCTCCATTTCT 58.555 40.000 0.00 0.00 0.00 2.52
3728 4832 6.732896 TCTATGTTCTACTCCCTCCATTTC 57.267 41.667 0.00 0.00 0.00 2.17
3729 4833 6.674419 ACTTCTATGTTCTACTCCCTCCATTT 59.326 38.462 0.00 0.00 0.00 2.32
3730 4834 6.098982 CACTTCTATGTTCTACTCCCTCCATT 59.901 42.308 0.00 0.00 0.00 3.16
3731 4835 5.600484 CACTTCTATGTTCTACTCCCTCCAT 59.400 44.000 0.00 0.00 0.00 3.41
3732 4836 4.956700 CACTTCTATGTTCTACTCCCTCCA 59.043 45.833 0.00 0.00 0.00 3.86
3733 4837 4.202172 GCACTTCTATGTTCTACTCCCTCC 60.202 50.000 0.00 0.00 0.00 4.30
3737 4841 5.105716 TCACAGCACTTCTATGTTCTACTCC 60.106 44.000 0.00 0.00 0.00 3.85
3740 4844 5.006165 GCATCACAGCACTTCTATGTTCTAC 59.994 44.000 0.00 0.00 0.00 2.59
3751 4855 2.038164 TCAGAAGAGCATCACAGCACTT 59.962 45.455 0.00 0.00 45.83 3.16
3752 4856 1.622312 TCAGAAGAGCATCACAGCACT 59.378 47.619 0.00 0.00 37.82 4.40
3753 4857 2.090400 TCAGAAGAGCATCACAGCAC 57.910 50.000 0.00 0.00 37.82 4.40
3758 4862 7.484007 CACAAACATTAATCAGAAGAGCATCAC 59.516 37.037 0.00 0.00 37.82 3.06
3762 4866 6.882610 ACACAAACATTAATCAGAAGAGCA 57.117 33.333 0.00 0.00 0.00 4.26
3765 4869 9.734620 CAAAGAACACAAACATTAATCAGAAGA 57.265 29.630 0.00 0.00 0.00 2.87
3769 4873 7.920151 TCCACAAAGAACACAAACATTAATCAG 59.080 33.333 0.00 0.00 0.00 2.90
3773 4877 7.397892 TCTCCACAAAGAACACAAACATTAA 57.602 32.000 0.00 0.00 0.00 1.40
3774 4878 7.397892 TTCTCCACAAAGAACACAAACATTA 57.602 32.000 0.00 0.00 30.38 1.90
3775 4879 5.913137 TCTCCACAAAGAACACAAACATT 57.087 34.783 0.00 0.00 0.00 2.71
3778 4882 6.253512 GTCATTTCTCCACAAAGAACACAAAC 59.746 38.462 0.00 0.00 35.06 2.93
3779 4883 6.071672 TGTCATTTCTCCACAAAGAACACAAA 60.072 34.615 0.00 0.00 35.06 2.83
3781 4885 4.946772 TGTCATTTCTCCACAAAGAACACA 59.053 37.500 0.00 0.00 35.06 3.72
3782 4886 5.066505 ACTGTCATTTCTCCACAAAGAACAC 59.933 40.000 0.00 0.00 35.06 3.32
3784 4888 5.278022 GGACTGTCATTTCTCCACAAAGAAC 60.278 44.000 10.38 0.00 35.06 3.01
3785 4889 4.821805 GGACTGTCATTTCTCCACAAAGAA 59.178 41.667 10.38 0.00 33.50 2.52
3787 4891 4.136796 TGGACTGTCATTTCTCCACAAAG 58.863 43.478 10.38 0.00 0.00 2.77
3788 4892 4.136796 CTGGACTGTCATTTCTCCACAAA 58.863 43.478 10.38 0.00 0.00 2.83
3790 4894 2.972021 TCTGGACTGTCATTTCTCCACA 59.028 45.455 10.38 0.00 0.00 4.17
3791 4895 3.685139 TCTGGACTGTCATTTCTCCAC 57.315 47.619 10.38 0.00 0.00 4.02
3792 4896 4.916041 ATTCTGGACTGTCATTTCTCCA 57.084 40.909 10.38 0.00 0.00 3.86
3793 4897 6.410540 AGTAATTCTGGACTGTCATTTCTCC 58.589 40.000 10.38 0.00 0.00 3.71
3795 4899 7.227156 ACAAGTAATTCTGGACTGTCATTTCT 58.773 34.615 10.38 1.66 0.00 2.52
3819 4973 3.003480 GACTGGGTGTGAGCAAATAGAC 58.997 50.000 0.00 0.00 0.00 2.59
3822 4976 1.702401 TGGACTGGGTGTGAGCAAATA 59.298 47.619 0.00 0.00 0.00 1.40
3852 5006 2.195922 CAACCTGCAAGAACAAAGCAC 58.804 47.619 0.00 0.00 34.07 4.40
3853 5007 1.136695 CCAACCTGCAAGAACAAAGCA 59.863 47.619 0.00 0.00 34.07 3.91
3953 5107 3.401385 ACCTCCATTCTCCTCCATCAAT 58.599 45.455 0.00 0.00 0.00 2.57
4169 5323 9.423061 AGGTTCAGCAAACAATAATAATTGAAC 57.577 29.630 5.18 5.27 44.50 3.18
4300 5455 1.552578 TGGTACAGTCTGCACCGTAT 58.447 50.000 16.07 0.00 36.57 3.06
4335 5490 5.991328 ACACACAATAAATAGGCAGATCG 57.009 39.130 0.00 0.00 0.00 3.69
4358 5513 4.374689 TGATAGGCCCTAACACACAAAA 57.625 40.909 0.00 0.00 0.00 2.44
4359 5514 4.584638 ATGATAGGCCCTAACACACAAA 57.415 40.909 2.44 0.00 0.00 2.83
4405 5560 3.818210 TCATACTTCGCTTCAGGCAAAAA 59.182 39.130 0.00 0.00 41.91 1.94
4412 5567 3.114809 CTCAGCTCATACTTCGCTTCAG 58.885 50.000 0.00 0.00 0.00 3.02
4413 5568 2.736719 GCTCAGCTCATACTTCGCTTCA 60.737 50.000 0.00 0.00 0.00 3.02
4419 5574 3.118811 AGAGTTGGCTCAGCTCATACTTC 60.119 47.826 16.96 0.00 42.71 3.01
4442 5597 4.310357 ACAACCAAAATCCGGTGTTTAC 57.690 40.909 0.00 0.00 36.67 2.01
4489 5645 7.876936 AGATCATGTGTATGCAGAAGAAAAT 57.123 32.000 0.00 0.00 34.21 1.82
4522 5678 3.119101 CGGCACAGAGGAAGTACACTAAT 60.119 47.826 0.00 0.00 0.00 1.73
4541 5704 2.770164 ACTCCCTCATATATTGCGGC 57.230 50.000 0.00 0.00 0.00 6.53
4542 5705 3.195610 TGCTACTCCCTCATATATTGCGG 59.804 47.826 0.00 0.00 0.00 5.69
4543 5706 4.456280 TGCTACTCCCTCATATATTGCG 57.544 45.455 0.00 0.00 0.00 4.85
4544 5707 7.011857 GCTAAATGCTACTCCCTCATATATTGC 59.988 40.741 0.00 0.00 38.95 3.56
4618 5824 4.699925 TCTTATATTTTGGGACCGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
4619 5825 5.433526 TGTTCTTATATTTTGGGACCGAGG 58.566 41.667 0.00 0.00 0.00 4.63
4620 5826 7.499232 AGAATGTTCTTATATTTTGGGACCGAG 59.501 37.037 0.00 0.00 32.55 4.63
4621 5827 7.343357 AGAATGTTCTTATATTTTGGGACCGA 58.657 34.615 0.00 0.00 32.55 4.69
4622 5828 7.568199 AGAATGTTCTTATATTTTGGGACCG 57.432 36.000 0.00 0.00 32.55 4.79
4634 5840 9.436957 CCAGTGTAGTGTTAAGAATGTTCTTAT 57.563 33.333 14.12 4.47 45.99 1.73
4635 5841 8.426489 ACCAGTGTAGTGTTAAGAATGTTCTTA 58.574 33.333 10.36 10.36 45.17 2.10
4637 5843 6.706270 CACCAGTGTAGTGTTAAGAATGTTCT 59.294 38.462 0.00 0.00 39.74 3.01
4638 5844 6.482308 ACACCAGTGTAGTGTTAAGAATGTTC 59.518 38.462 0.54 0.00 46.07 3.18
4639 5845 6.354130 ACACCAGTGTAGTGTTAAGAATGTT 58.646 36.000 0.54 0.00 46.07 2.71
4640 5846 5.925509 ACACCAGTGTAGTGTTAAGAATGT 58.074 37.500 0.54 0.00 46.07 2.71
4650 5856 2.794910 CGTTTCTGACACCAGTGTAGTG 59.205 50.000 2.85 0.00 45.05 2.74
4651 5857 2.429610 ACGTTTCTGACACCAGTGTAGT 59.570 45.455 2.85 0.00 45.05 2.73
4652 5858 3.093717 ACGTTTCTGACACCAGTGTAG 57.906 47.619 2.85 2.80 45.05 2.74
4653 5859 3.131577 AGAACGTTTCTGACACCAGTGTA 59.868 43.478 0.46 0.00 39.38 2.90
4654 5860 2.093658 AGAACGTTTCTGACACCAGTGT 60.094 45.455 0.46 2.40 41.16 3.55
4655 5861 2.550978 AGAACGTTTCTGACACCAGTG 58.449 47.619 0.46 0.00 41.16 3.66
4656 5862 2.981859 AGAACGTTTCTGACACCAGT 57.018 45.000 0.46 0.00 41.16 4.00
4657 5863 7.596749 AATATAAGAACGTTTCTGACACCAG 57.403 36.000 0.46 0.00 40.59 4.00
4658 5864 9.093970 CATAATATAAGAACGTTTCTGACACCA 57.906 33.333 0.46 0.00 40.59 4.17
4659 5865 8.548721 CCATAATATAAGAACGTTTCTGACACC 58.451 37.037 0.46 0.00 40.59 4.16
4660 5866 8.548721 CCCATAATATAAGAACGTTTCTGACAC 58.451 37.037 0.46 0.00 40.59 3.67
4661 5867 8.479689 TCCCATAATATAAGAACGTTTCTGACA 58.520 33.333 0.46 0.00 40.59 3.58
4662 5868 8.762426 GTCCCATAATATAAGAACGTTTCTGAC 58.238 37.037 0.46 0.00 40.59 3.51
4663 5869 7.650504 CGTCCCATAATATAAGAACGTTTCTGA 59.349 37.037 0.46 0.00 40.59 3.27
4664 5870 7.650504 TCGTCCCATAATATAAGAACGTTTCTG 59.349 37.037 0.46 0.00 40.59 3.02
4665 5871 7.719483 TCGTCCCATAATATAAGAACGTTTCT 58.281 34.615 0.46 0.00 43.15 2.52
4666 5872 7.935338 TCGTCCCATAATATAAGAACGTTTC 57.065 36.000 0.46 0.00 0.00 2.78
4667 5873 7.440255 CCTTCGTCCCATAATATAAGAACGTTT 59.560 37.037 0.46 0.00 0.00 3.60
4668 5874 6.927381 CCTTCGTCCCATAATATAAGAACGTT 59.073 38.462 0.00 0.00 0.00 3.99
4669 5875 6.266103 TCCTTCGTCCCATAATATAAGAACGT 59.734 38.462 0.00 0.00 0.00 3.99
4670 5876 6.684686 TCCTTCGTCCCATAATATAAGAACG 58.315 40.000 0.00 0.00 0.00 3.95
4671 5877 8.148999 ACTTCCTTCGTCCCATAATATAAGAAC 58.851 37.037 0.00 0.00 0.00 3.01
4672 5878 8.258850 ACTTCCTTCGTCCCATAATATAAGAA 57.741 34.615 0.00 0.00 0.00 2.52
4673 5879 7.850935 ACTTCCTTCGTCCCATAATATAAGA 57.149 36.000 0.00 0.00 0.00 2.10
4674 5880 8.804204 AGTACTTCCTTCGTCCCATAATATAAG 58.196 37.037 0.00 0.00 0.00 1.73
4675 5881 8.716674 AGTACTTCCTTCGTCCCATAATATAA 57.283 34.615 0.00 0.00 0.00 0.98
4676 5882 8.716674 AAGTACTTCCTTCGTCCCATAATATA 57.283 34.615 1.12 0.00 0.00 0.86
4677 5883 7.613551 AAGTACTTCCTTCGTCCCATAATAT 57.386 36.000 1.12 0.00 0.00 1.28
4678 5884 7.427989 AAAGTACTTCCTTCGTCCCATAATA 57.572 36.000 8.95 0.00 0.00 0.98
4679 5885 5.952347 AAGTACTTCCTTCGTCCCATAAT 57.048 39.130 1.12 0.00 0.00 1.28
4680 5886 5.750352 AAAGTACTTCCTTCGTCCCATAA 57.250 39.130 8.95 0.00 0.00 1.90
4681 5887 6.189859 TCTAAAGTACTTCCTTCGTCCCATA 58.810 40.000 8.95 0.00 0.00 2.74
4682 5888 5.021458 TCTAAAGTACTTCCTTCGTCCCAT 58.979 41.667 8.95 0.00 0.00 4.00
4683 5889 4.410099 TCTAAAGTACTTCCTTCGTCCCA 58.590 43.478 8.95 0.00 0.00 4.37
4684 5890 5.184671 TCTTCTAAAGTACTTCCTTCGTCCC 59.815 44.000 8.95 0.00 0.00 4.46
4685 5891 6.264841 TCTTCTAAAGTACTTCCTTCGTCC 57.735 41.667 8.95 0.00 0.00 4.79
4686 5892 7.369607 ACTTCTTCTAAAGTACTTCCTTCGTC 58.630 38.462 8.95 0.00 37.71 4.20
4687 5893 7.287512 ACTTCTTCTAAAGTACTTCCTTCGT 57.712 36.000 8.95 0.00 37.71 3.85
4688 5894 7.116519 CCAACTTCTTCTAAAGTACTTCCTTCG 59.883 40.741 8.95 0.00 38.52 3.79
4689 5895 7.095144 GCCAACTTCTTCTAAAGTACTTCCTTC 60.095 40.741 8.95 0.00 38.52 3.46
4690 5896 6.711194 GCCAACTTCTTCTAAAGTACTTCCTT 59.289 38.462 8.95 0.00 38.52 3.36
4691 5897 6.043358 AGCCAACTTCTTCTAAAGTACTTCCT 59.957 38.462 8.95 0.00 38.52 3.36
4692 5898 6.231951 AGCCAACTTCTTCTAAAGTACTTCC 58.768 40.000 8.95 0.00 38.52 3.46
4697 5903 9.326413 GCAATATAGCCAACTTCTTCTAAAGTA 57.674 33.333 0.00 0.00 38.52 2.24
4698 5904 7.829211 TGCAATATAGCCAACTTCTTCTAAAGT 59.171 33.333 0.00 0.00 41.20 2.66
4699 5905 8.125448 GTGCAATATAGCCAACTTCTTCTAAAG 58.875 37.037 0.00 0.00 0.00 1.85
4700 5906 7.609918 TGTGCAATATAGCCAACTTCTTCTAAA 59.390 33.333 0.00 0.00 0.00 1.85
4759 5965 3.083997 GGCCCGAGTGGAGATGGT 61.084 66.667 0.00 0.00 37.49 3.55
4831 6037 9.095065 GCAGAGAGGTCGAAAGTAAATAATTTA 57.905 33.333 0.00 0.00 0.00 1.40
4834 6047 6.640518 TGCAGAGAGGTCGAAAGTAAATAAT 58.359 36.000 0.00 0.00 0.00 1.28
4845 6058 6.656632 ATCTTAATTATGCAGAGAGGTCGA 57.343 37.500 0.00 0.00 0.00 4.20
4847 6060 9.988815 TCTTAATCTTAATTATGCAGAGAGGTC 57.011 33.333 0.00 0.00 0.00 3.85
4862 6075 9.612066 TGTGTGATATGTGCATCTTAATCTTAA 57.388 29.630 0.00 0.00 0.00 1.85
4863 6076 9.045223 GTGTGTGATATGTGCATCTTAATCTTA 57.955 33.333 0.00 0.00 0.00 2.10
4864 6077 7.553760 TGTGTGTGATATGTGCATCTTAATCTT 59.446 33.333 0.00 0.00 0.00 2.40
4865 6078 7.049754 TGTGTGTGATATGTGCATCTTAATCT 58.950 34.615 0.00 0.00 0.00 2.40
4866 6079 7.250445 TGTGTGTGATATGTGCATCTTAATC 57.750 36.000 0.00 0.00 0.00 1.75
4879 6092 7.068103 TGTTTTTGTTCTCCTTGTGTGTGATAT 59.932 33.333 0.00 0.00 0.00 1.63
4887 6100 8.076178 CCTAGTAATGTTTTTGTTCTCCTTGTG 58.924 37.037 0.00 0.00 0.00 3.33
4897 6110 8.953313 GCCTATGTTACCTAGTAATGTTTTTGT 58.047 33.333 0.00 0.00 30.49 2.83
4898 6111 9.174166 AGCCTATGTTACCTAGTAATGTTTTTG 57.826 33.333 0.00 0.00 30.49 2.44
4900 6113 7.282450 GCAGCCTATGTTACCTAGTAATGTTTT 59.718 37.037 0.00 0.00 30.49 2.43
4901 6114 6.766467 GCAGCCTATGTTACCTAGTAATGTTT 59.234 38.462 0.00 0.00 30.49 2.83
4902 6115 6.289064 GCAGCCTATGTTACCTAGTAATGTT 58.711 40.000 0.00 0.00 30.49 2.71
4903 6116 5.509163 CGCAGCCTATGTTACCTAGTAATGT 60.509 44.000 0.00 0.00 30.49 2.71
4904 6117 4.923871 CGCAGCCTATGTTACCTAGTAATG 59.076 45.833 0.00 0.00 30.49 1.90
4905 6118 4.831155 TCGCAGCCTATGTTACCTAGTAAT 59.169 41.667 0.00 0.00 30.49 1.89
4906 6119 4.037208 GTCGCAGCCTATGTTACCTAGTAA 59.963 45.833 0.00 0.00 0.00 2.24
4907 6120 3.567164 GTCGCAGCCTATGTTACCTAGTA 59.433 47.826 0.00 0.00 0.00 1.82
4908 6121 2.361438 GTCGCAGCCTATGTTACCTAGT 59.639 50.000 0.00 0.00 0.00 2.57
4909 6122 2.361119 TGTCGCAGCCTATGTTACCTAG 59.639 50.000 0.00 0.00 0.00 3.02
4910 6123 2.380941 TGTCGCAGCCTATGTTACCTA 58.619 47.619 0.00 0.00 0.00 3.08
4911 6124 1.191535 TGTCGCAGCCTATGTTACCT 58.808 50.000 0.00 0.00 0.00 3.08
4912 6125 2.018542 TTGTCGCAGCCTATGTTACC 57.981 50.000 0.00 0.00 0.00 2.85
4913 6126 4.153475 TCTTTTTGTCGCAGCCTATGTTAC 59.847 41.667 0.00 0.00 0.00 2.50
4914 6127 4.320023 TCTTTTTGTCGCAGCCTATGTTA 58.680 39.130 0.00 0.00 0.00 2.41
4915 6128 3.146066 TCTTTTTGTCGCAGCCTATGTT 58.854 40.909 0.00 0.00 0.00 2.71
4916 6129 2.778299 TCTTTTTGTCGCAGCCTATGT 58.222 42.857 0.00 0.00 0.00 2.29
4917 6130 3.829886 TTCTTTTTGTCGCAGCCTATG 57.170 42.857 0.00 0.00 0.00 2.23
4918 6131 6.498304 CATTATTCTTTTTGTCGCAGCCTAT 58.502 36.000 0.00 0.00 0.00 2.57
4919 6132 5.676079 GCATTATTCTTTTTGTCGCAGCCTA 60.676 40.000 0.00 0.00 0.00 3.93
4920 6133 4.737054 CATTATTCTTTTTGTCGCAGCCT 58.263 39.130 0.00 0.00 0.00 4.58
4921 6134 3.304293 GCATTATTCTTTTTGTCGCAGCC 59.696 43.478 0.00 0.00 0.00 4.85
4922 6135 3.304293 GGCATTATTCTTTTTGTCGCAGC 59.696 43.478 0.00 0.00 0.00 5.25
4923 6136 3.543494 CGGCATTATTCTTTTTGTCGCAG 59.457 43.478 0.00 0.00 29.93 5.18
4924 6137 3.057876 ACGGCATTATTCTTTTTGTCGCA 60.058 39.130 0.00 0.00 40.62 5.10
4925 6138 3.498082 ACGGCATTATTCTTTTTGTCGC 58.502 40.909 0.00 0.00 40.62 5.19
4926 6139 4.969816 AGACGGCATTATTCTTTTTGTCG 58.030 39.130 0.00 0.00 42.49 4.35
4927 6140 6.967199 CCTTAGACGGCATTATTCTTTTTGTC 59.033 38.462 0.00 0.00 0.00 3.18
4928 6141 6.433093 ACCTTAGACGGCATTATTCTTTTTGT 59.567 34.615 0.00 0.00 0.00 2.83
4929 6142 6.747280 CACCTTAGACGGCATTATTCTTTTTG 59.253 38.462 0.00 0.00 0.00 2.44
4930 6143 6.657541 TCACCTTAGACGGCATTATTCTTTTT 59.342 34.615 0.00 0.00 0.00 1.94
4941 6154 0.738975 CTCGATCACCTTAGACGGCA 59.261 55.000 0.00 0.00 0.00 5.69
4945 6158 0.030908 CGCCCTCGATCACCTTAGAC 59.969 60.000 0.00 0.00 38.10 2.59
4957 6170 1.880271 TAGTCTCATACTCGCCCTCG 58.120 55.000 0.00 0.00 39.80 4.63
4968 6181 5.937492 AATGGATGGGGATTTAGTCTCAT 57.063 39.130 0.00 0.00 0.00 2.90
4969 6182 5.732331 AAATGGATGGGGATTTAGTCTCA 57.268 39.130 0.00 0.00 0.00 3.27
5001 6214 7.553881 TTGAGAAACAGGTAGTCAAGAAAAG 57.446 36.000 0.00 0.00 0.00 2.27
5002 6215 7.931578 TTTGAGAAACAGGTAGTCAAGAAAA 57.068 32.000 0.00 0.00 0.00 2.29
5052 6265 9.781834 CGTTTTGCCTATGTAGAAATGATAAAA 57.218 29.630 0.00 0.00 0.00 1.52
5053 6266 8.402472 CCGTTTTGCCTATGTAGAAATGATAAA 58.598 33.333 0.00 0.00 0.00 1.40
5054 6267 7.468084 GCCGTTTTGCCTATGTAGAAATGATAA 60.468 37.037 0.00 0.00 0.00 1.75
5055 6268 6.017440 GCCGTTTTGCCTATGTAGAAATGATA 60.017 38.462 0.00 0.00 0.00 2.15
5056 6269 5.221048 GCCGTTTTGCCTATGTAGAAATGAT 60.221 40.000 0.00 0.00 0.00 2.45
5057 6270 4.095782 GCCGTTTTGCCTATGTAGAAATGA 59.904 41.667 0.00 0.00 0.00 2.57
5058 6271 4.351192 GCCGTTTTGCCTATGTAGAAATG 58.649 43.478 0.00 0.00 0.00 2.32
5059 6272 4.632538 GCCGTTTTGCCTATGTAGAAAT 57.367 40.909 0.00 0.00 0.00 2.17
5071 6284 0.649993 CACTTTGTTGGCCGTTTTGC 59.350 50.000 0.00 0.00 0.00 3.68
5072 6285 2.003196 ACACTTTGTTGGCCGTTTTG 57.997 45.000 0.00 0.00 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.