Multiple sequence alignment - TraesCS2B01G104200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G104200 chr2B 100.000 4498 0 0 1 4498 64991271 64986774 0.000000e+00 8307.0
1 TraesCS2B01G104200 chr2B 91.620 537 31 2 3202 3737 64949609 64949086 0.000000e+00 730.0
2 TraesCS2B01G104200 chr2B 93.950 281 13 4 3935 4213 171011004 171011282 5.380000e-114 422.0
3 TraesCS2B01G104200 chr2B 93.640 283 14 4 3934 4213 91604742 91605023 1.930000e-113 420.0
4 TraesCS2B01G104200 chr2B 93.640 283 14 4 3934 4213 170784723 170784442 1.930000e-113 420.0
5 TraesCS2B01G104200 chr2B 92.226 283 18 4 3934 4213 621316280 621316561 9.070000e-107 398.0
6 TraesCS2B01G104200 chr2B 95.968 124 4 1 4219 4341 171011894 171012017 2.740000e-47 200.0
7 TraesCS2B01G104200 chr2B 93.269 104 7 0 3109 3212 64950497 64950394 2.170000e-33 154.0
8 TraesCS2B01G104200 chr2B 83.486 109 18 0 926 1034 263847344 263847452 7.960000e-18 102.0
9 TraesCS2B01G104200 chr2D 90.054 3348 200 60 462 3737 37254377 37251091 0.000000e+00 4215.0
10 TraesCS2B01G104200 chr2D 85.034 147 21 1 2670 2815 285064581 285064435 1.010000e-31 148.0
11 TraesCS2B01G104200 chr2D 75.862 232 37 10 2907 3138 285064281 285064069 2.860000e-17 100.0
12 TraesCS2B01G104200 chr2D 94.231 52 3 0 102 153 37254892 37254841 3.730000e-11 80.5
13 TraesCS2B01G104200 chr2D 95.238 42 2 0 926 967 398308042 398308001 2.900000e-07 67.6
14 TraesCS2B01G104200 chr2D 93.333 45 3 0 226 270 444393918 444393874 2.900000e-07 67.6
15 TraesCS2B01G104200 chr2D 97.368 38 1 0 1771 1808 234256881 234256918 1.040000e-06 65.8
16 TraesCS2B01G104200 chr2A 85.752 3432 280 113 404 3728 42155549 42152220 0.000000e+00 3435.0
17 TraesCS2B01G104200 chr2A 85.310 742 65 26 1041 1770 597070029 597070738 0.000000e+00 726.0
18 TraesCS2B01G104200 chr2A 91.089 101 5 1 99 195 42156007 42155907 2.820000e-27 134.0
19 TraesCS2B01G104200 chr2A 81.203 133 23 2 926 1056 193696321 193696189 6.150000e-19 106.0
20 TraesCS2B01G104200 chr2A 93.333 45 3 0 226 270 587162869 587162825 2.900000e-07 67.6
21 TraesCS2B01G104200 chr5B 95.951 568 20 3 3933 4498 586324132 586323566 0.000000e+00 918.0
22 TraesCS2B01G104200 chr5B 96.386 83 2 1 1 83 626196918 626196837 7.850000e-28 135.0
23 TraesCS2B01G104200 chr5B 93.333 45 3 0 226 270 293535482 293535438 2.900000e-07 67.6
24 TraesCS2B01G104200 chr5B 91.304 46 4 0 222 267 461614453 461614408 3.760000e-06 63.9
25 TraesCS2B01G104200 chr5B 100.000 34 0 0 3736 3769 517217502 517217469 3.760000e-06 63.9
26 TraesCS2B01G104200 chr6B 95.591 567 22 3 3934 4498 28057823 28058388 0.000000e+00 905.0
27 TraesCS2B01G104200 chr6B 86.077 826 60 28 967 1773 267740685 267741474 0.000000e+00 837.0
28 TraesCS2B01G104200 chr6B 88.427 553 44 13 1227 1770 91949275 91949816 0.000000e+00 649.0
29 TraesCS2B01G104200 chr6B 87.478 567 54 9 1211 1770 76737172 76736616 4.910000e-179 638.0
30 TraesCS2B01G104200 chr6B 87.075 147 18 1 2670 2815 199961595 199961741 1.000000e-36 165.0
31 TraesCS2B01G104200 chr6B 94.253 87 2 1 812 898 267740184 267740267 3.650000e-26 130.0
32 TraesCS2B01G104200 chr6B 80.864 162 22 4 3067 3226 30286380 30286534 7.900000e-23 119.0
33 TraesCS2B01G104200 chr6B 75.745 235 32 15 2904 3135 199961892 199962104 1.330000e-15 95.3
34 TraesCS2B01G104200 chr6B 90.000 50 5 0 229 278 269946933 269946884 1.040000e-06 65.8
35 TraesCS2B01G104200 chr1B 92.782 568 24 4 3933 4498 640869545 640870097 0.000000e+00 806.0
36 TraesCS2B01G104200 chr1B 91.349 289 21 4 3928 4213 630536142 630536429 4.220000e-105 392.0
37 TraesCS2B01G104200 chr7A 85.580 742 64 27 1041 1770 633536896 633536186 0.000000e+00 737.0
38 TraesCS2B01G104200 chr7A 85.040 742 68 28 1041 1770 633542279 633541569 0.000000e+00 715.0
39 TraesCS2B01G104200 chr7A 94.565 92 4 1 1 92 442265801 442265891 1.690000e-29 141.0
40 TraesCS2B01G104200 chr7A 97.222 36 1 0 3734 3769 686240295 686240260 1.350000e-05 62.1
41 TraesCS2B01G104200 chr3B 88.536 567 48 9 1211 1770 164322353 164321797 0.000000e+00 671.0
42 TraesCS2B01G104200 chr3B 88.183 567 50 9 1211 1770 693619953 693619397 0.000000e+00 660.0
43 TraesCS2B01G104200 chr3B 88.406 552 46 11 1227 1770 690614029 690614570 0.000000e+00 649.0
44 TraesCS2B01G104200 chr3B 89.744 117 9 2 4222 4336 29328123 29328008 3.630000e-31 147.0
45 TraesCS2B01G104200 chr3B 94.253 87 4 1 1 87 695505213 695505128 1.020000e-26 132.0
46 TraesCS2B01G104200 chr3B 83.051 118 18 2 931 1046 215620827 215620944 6.150000e-19 106.0
47 TraesCS2B01G104200 chr3B 75.536 233 36 12 2907 3138 691503305 691503093 1.330000e-15 95.3
48 TraesCS2B01G104200 chr4B 95.070 284 10 4 3933 4213 81014510 81014228 1.150000e-120 444.0
49 TraesCS2B01G104200 chr7B 93.103 145 7 2 4356 4498 105006124 105005981 4.560000e-50 209.0
50 TraesCS2B01G104200 chr7B 92.414 145 8 2 4356 4498 671061337 671061480 2.120000e-48 204.0
51 TraesCS2B01G104200 chr7B 92.414 145 8 2 4356 4498 671179163 671179306 2.120000e-48 204.0
52 TraesCS2B01G104200 chr7B 92.414 145 8 2 4356 4498 671251924 671252067 2.120000e-48 204.0
53 TraesCS2B01G104200 chr3D 92.414 145 10 1 4220 4364 598857185 598857042 5.900000e-49 206.0
54 TraesCS2B01G104200 chr3D 88.889 117 10 2 4222 4336 18555006 18554891 1.690000e-29 141.0
55 TraesCS2B01G104200 chr3D 92.308 91 6 1 1 91 429788533 429788622 1.310000e-25 128.0
56 TraesCS2B01G104200 chr3D 81.818 143 24 2 926 1066 497764181 497764039 7.900000e-23 119.0
57 TraesCS2B01G104200 chrUn 92.414 145 8 2 4356 4498 147150055 147150198 2.120000e-48 204.0
58 TraesCS2B01G104200 chrUn 92.414 145 8 2 4356 4498 147231849 147231992 2.120000e-48 204.0
59 TraesCS2B01G104200 chrUn 92.045 88 4 1 811 898 261369693 261369777 2.200000e-23 121.0
60 TraesCS2B01G104200 chr7D 90.345 145 13 1 4219 4363 30758244 30758387 5.940000e-44 189.0
61 TraesCS2B01G104200 chr6A 94.444 90 3 2 1 89 32749142 32749054 2.180000e-28 137.0
62 TraesCS2B01G104200 chr6A 96.341 82 2 1 1 82 65544186 65544106 2.820000e-27 134.0
63 TraesCS2B01G104200 chr5D 96.341 82 2 1 1 82 420186300 420186220 2.820000e-27 134.0
64 TraesCS2B01G104200 chr5D 97.368 38 1 0 1771 1808 157852692 157852655 1.040000e-06 65.8
65 TraesCS2B01G104200 chr5D 95.122 41 2 0 230 270 215257029 215256989 1.040000e-06 65.8
66 TraesCS2B01G104200 chr5D 90.476 42 2 2 3736 3775 319182811 319182770 2.000000e-03 54.7
67 TraesCS2B01G104200 chr4D 96.341 82 2 1 1 82 299857642 299857562 2.820000e-27 134.0
68 TraesCS2B01G104200 chr4D 90.566 53 5 0 226 278 450152430 450152482 2.240000e-08 71.3
69 TraesCS2B01G104200 chr4D 100.000 28 0 0 363 390 450152439 450152466 8.000000e-03 52.8
70 TraesCS2B01G104200 chr1A 93.258 89 4 2 1 89 475456923 475457009 3.650000e-26 130.0
71 TraesCS2B01G104200 chr1A 86.239 109 15 0 926 1034 435406457 435406565 7.900000e-23 119.0
72 TraesCS2B01G104200 chr1A 100.000 38 0 0 1771 1808 296330166 296330129 2.240000e-08 71.3
73 TraesCS2B01G104200 chr1A 91.489 47 2 2 3736 3780 49300479 49300433 3.760000e-06 63.9
74 TraesCS2B01G104200 chr1A 91.111 45 4 0 226 270 459273285 459273329 1.350000e-05 62.1
75 TraesCS2B01G104200 chr3A 84.127 126 19 1 926 1051 708354937 708354813 2.200000e-23 121.0
76 TraesCS2B01G104200 chr3A 97.368 38 1 0 1771 1808 12990144 12990107 1.040000e-06 65.8
77 TraesCS2B01G104200 chr3A 97.368 38 1 0 1771 1808 596870973 596871010 1.040000e-06 65.8
78 TraesCS2B01G104200 chr3A 97.368 38 1 0 1771 1808 596921956 596921993 1.040000e-06 65.8
79 TraesCS2B01G104200 chr3A 97.368 38 1 0 1771 1808 649831865 649831902 1.040000e-06 65.8
80 TraesCS2B01G104200 chr3A 100.000 31 0 0 3737 3767 529150455 529150425 1.750000e-04 58.4
81 TraesCS2B01G104200 chr5A 97.368 38 1 0 1771 1808 490843069 490843106 1.040000e-06 65.8
82 TraesCS2B01G104200 chr5A 85.075 67 6 3 204 270 680072619 680072681 1.040000e-06 65.8
83 TraesCS2B01G104200 chr5A 97.143 35 1 0 3735 3769 632838509 632838543 4.860000e-05 60.2
84 TraesCS2B01G104200 chr5A 96.970 33 1 0 3737 3769 523157795 523157763 6.290000e-04 56.5
85 TraesCS2B01G104200 chr4A 93.182 44 3 0 3736 3779 102766854 102766811 1.040000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G104200 chr2B 64986774 64991271 4497 True 8307.00 8307 100.0000 1 4498 1 chr2B.!!$R1 4497
1 TraesCS2B01G104200 chr2B 64949086 64950497 1411 True 442.00 730 92.4445 3109 3737 2 chr2B.!!$R3 628
2 TraesCS2B01G104200 chr2B 171011004 171012017 1013 False 311.00 422 94.9590 3935 4341 2 chr2B.!!$F4 406
3 TraesCS2B01G104200 chr2D 37251091 37254892 3801 True 2147.75 4215 92.1425 102 3737 2 chr2D.!!$R3 3635
4 TraesCS2B01G104200 chr2A 42152220 42156007 3787 True 1784.50 3435 88.4205 99 3728 2 chr2A.!!$R3 3629
5 TraesCS2B01G104200 chr2A 597070029 597070738 709 False 726.00 726 85.3100 1041 1770 1 chr2A.!!$F1 729
6 TraesCS2B01G104200 chr5B 586323566 586324132 566 True 918.00 918 95.9510 3933 4498 1 chr5B.!!$R4 565
7 TraesCS2B01G104200 chr6B 28057823 28058388 565 False 905.00 905 95.5910 3934 4498 1 chr6B.!!$F1 564
8 TraesCS2B01G104200 chr6B 91949275 91949816 541 False 649.00 649 88.4270 1227 1770 1 chr6B.!!$F3 543
9 TraesCS2B01G104200 chr6B 76736616 76737172 556 True 638.00 638 87.4780 1211 1770 1 chr6B.!!$R1 559
10 TraesCS2B01G104200 chr6B 267740184 267741474 1290 False 483.50 837 90.1650 812 1773 2 chr6B.!!$F5 961
11 TraesCS2B01G104200 chr1B 640869545 640870097 552 False 806.00 806 92.7820 3933 4498 1 chr1B.!!$F2 565
12 TraesCS2B01G104200 chr7A 633536186 633536896 710 True 737.00 737 85.5800 1041 1770 1 chr7A.!!$R1 729
13 TraesCS2B01G104200 chr7A 633541569 633542279 710 True 715.00 715 85.0400 1041 1770 1 chr7A.!!$R2 729
14 TraesCS2B01G104200 chr3B 164321797 164322353 556 True 671.00 671 88.5360 1211 1770 1 chr3B.!!$R2 559
15 TraesCS2B01G104200 chr3B 693619397 693619953 556 True 660.00 660 88.1830 1211 1770 1 chr3B.!!$R4 559
16 TraesCS2B01G104200 chr3B 690614029 690614570 541 False 649.00 649 88.4060 1227 1770 1 chr3B.!!$F2 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
336 583 0.320374 CCACCGCCACTACTTCAGAA 59.680 55.0 0.00 0.00 0.00 3.02 F
1962 2674 0.179020 TTCCACCACAGTTCCTGCAG 60.179 55.0 6.78 6.78 34.37 4.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2190 2911 0.169672 CCATGACAAGGAAAGCAGCG 59.830 55.0 0.0 0.0 0.0 5.18 R
3895 5435 0.035458 ACTCGGTGCTTCTCCCTTTG 59.965 55.0 0.0 0.0 0.0 2.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 9.546428 AGACAAATTTAAGACAAGAATTTTGGG 57.454 29.630 0.00 0.00 33.39 4.12
70 71 9.541143 GACAAATTTAAGACAAGAATTTTGGGA 57.459 29.630 0.00 0.00 33.39 4.37
71 72 9.898152 ACAAATTTAAGACAAGAATTTTGGGAA 57.102 25.926 0.00 0.00 33.39 3.97
73 74 9.559732 AAATTTAAGACAAGAATTTTGGGAAGG 57.440 29.630 0.00 0.00 31.00 3.46
74 75 7.906199 TTTAAGACAAGAATTTTGGGAAGGA 57.094 32.000 5.68 0.00 0.00 3.36
75 76 7.524717 TTAAGACAAGAATTTTGGGAAGGAG 57.475 36.000 5.68 0.00 0.00 3.69
76 77 4.411013 AGACAAGAATTTTGGGAAGGAGG 58.589 43.478 5.68 0.00 0.00 4.30
77 78 3.510459 ACAAGAATTTTGGGAAGGAGGG 58.490 45.455 5.68 0.00 0.00 4.30
78 79 3.142028 ACAAGAATTTTGGGAAGGAGGGA 59.858 43.478 5.68 0.00 0.00 4.20
79 80 3.746792 AGAATTTTGGGAAGGAGGGAG 57.253 47.619 0.00 0.00 0.00 4.30
80 81 2.996742 AGAATTTTGGGAAGGAGGGAGT 59.003 45.455 0.00 0.00 0.00 3.85
81 82 4.183916 AGAATTTTGGGAAGGAGGGAGTA 58.816 43.478 0.00 0.00 0.00 2.59
82 83 4.018324 AGAATTTTGGGAAGGAGGGAGTAC 60.018 45.833 0.00 0.00 0.00 2.73
83 84 2.735259 TTTGGGAAGGAGGGAGTACT 57.265 50.000 0.00 0.00 0.00 2.73
84 85 3.858696 TTTGGGAAGGAGGGAGTACTA 57.141 47.619 0.00 0.00 0.00 1.82
85 86 3.399952 TTGGGAAGGAGGGAGTACTAG 57.600 52.381 0.00 0.00 0.00 2.57
86 87 1.063114 TGGGAAGGAGGGAGTACTAGC 60.063 57.143 0.00 0.00 0.00 3.42
87 88 1.063114 GGGAAGGAGGGAGTACTAGCA 60.063 57.143 0.00 0.00 0.00 3.49
88 89 2.426561 GGGAAGGAGGGAGTACTAGCAT 60.427 54.545 0.00 0.00 0.00 3.79
89 90 3.181420 GGGAAGGAGGGAGTACTAGCATA 60.181 52.174 0.00 0.00 0.00 3.14
90 91 4.083565 GGAAGGAGGGAGTACTAGCATAG 58.916 52.174 0.00 0.00 46.50 2.23
91 92 3.818295 AGGAGGGAGTACTAGCATAGG 57.182 52.381 0.00 0.00 44.97 2.57
92 93 3.065175 AGGAGGGAGTACTAGCATAGGT 58.935 50.000 0.00 0.00 44.97 3.08
93 94 3.467863 AGGAGGGAGTACTAGCATAGGTT 59.532 47.826 0.00 0.00 44.97 3.50
94 95 3.574826 GGAGGGAGTACTAGCATAGGTTG 59.425 52.174 0.00 0.00 44.97 3.77
178 198 8.934507 AGTTGAATTTCCACGTTATTTTCAAA 57.065 26.923 10.30 0.00 34.51 2.69
180 200 7.938563 TGAATTTCCACGTTATTTTCAAAGG 57.061 32.000 0.00 0.00 0.00 3.11
188 208 3.759618 CGTTATTTTCAAAGGGGTGGCTA 59.240 43.478 0.00 0.00 0.00 3.93
195 215 1.275421 AAAGGGGTGGCTAGCTCTCC 61.275 60.000 15.72 16.77 32.95 3.71
196 216 2.365635 GGGGTGGCTAGCTCTCCA 60.366 66.667 15.72 0.31 0.00 3.86
199 219 3.289525 GTGGCTAGCTCTCCACGT 58.710 61.111 15.72 0.00 42.67 4.49
201 221 0.815734 GTGGCTAGCTCTCCACGTTA 59.184 55.000 15.72 0.00 42.67 3.18
202 222 1.409427 GTGGCTAGCTCTCCACGTTAT 59.591 52.381 15.72 0.00 42.67 1.89
215 268 7.798982 GCTCTCCACGTTATTTTCAATATAAGC 59.201 37.037 0.00 0.00 0.00 3.09
219 272 9.096160 TCCACGTTATTTTCAATATAAGCGTTA 57.904 29.630 0.00 0.00 30.44 3.18
220 273 9.365311 CCACGTTATTTTCAATATAAGCGTTAG 57.635 33.333 0.00 0.83 30.44 2.34
221 274 9.910511 CACGTTATTTTCAATATAAGCGTTAGT 57.089 29.630 0.00 0.00 30.44 2.24
234 287 2.357009 AGCGTTAGTATGTACGGACTGG 59.643 50.000 0.00 1.63 38.17 4.00
271 324 9.515020 CAAACACACTAAAACATGTCTACATTT 57.485 29.630 0.00 0.00 33.61 2.32
282 529 9.793252 AAACATGTCTACATTTATCTGAATTGC 57.207 29.630 0.00 0.00 33.61 3.56
293 540 2.302260 TCTGAATTGCCAAACGTCCAA 58.698 42.857 0.00 0.00 0.00 3.53
322 569 7.455641 ACTCTAGATAATTCATAGTCCACCG 57.544 40.000 0.00 0.00 0.00 4.94
324 571 4.273148 AGATAATTCATAGTCCACCGCC 57.727 45.455 0.00 0.00 0.00 6.13
325 572 3.646162 AGATAATTCATAGTCCACCGCCA 59.354 43.478 0.00 0.00 0.00 5.69
326 573 2.038387 AATTCATAGTCCACCGCCAC 57.962 50.000 0.00 0.00 0.00 5.01
327 574 1.204146 ATTCATAGTCCACCGCCACT 58.796 50.000 0.00 0.00 0.00 4.00
329 576 1.108776 TCATAGTCCACCGCCACTAC 58.891 55.000 0.00 0.00 0.00 2.73
331 578 1.480954 CATAGTCCACCGCCACTACTT 59.519 52.381 0.00 0.00 0.00 2.24
332 579 1.180029 TAGTCCACCGCCACTACTTC 58.820 55.000 0.00 0.00 0.00 3.01
333 580 0.830444 AGTCCACCGCCACTACTTCA 60.830 55.000 0.00 0.00 0.00 3.02
334 581 0.389948 GTCCACCGCCACTACTTCAG 60.390 60.000 0.00 0.00 0.00 3.02
335 582 0.541063 TCCACCGCCACTACTTCAGA 60.541 55.000 0.00 0.00 0.00 3.27
336 583 0.320374 CCACCGCCACTACTTCAGAA 59.680 55.000 0.00 0.00 0.00 3.02
337 584 1.066143 CCACCGCCACTACTTCAGAAT 60.066 52.381 0.00 0.00 0.00 2.40
338 585 2.615493 CCACCGCCACTACTTCAGAATT 60.615 50.000 0.00 0.00 0.00 2.17
339 586 3.074412 CACCGCCACTACTTCAGAATTT 58.926 45.455 0.00 0.00 0.00 1.82
340 587 4.250464 CACCGCCACTACTTCAGAATTTA 58.750 43.478 0.00 0.00 0.00 1.40
341 588 4.876107 CACCGCCACTACTTCAGAATTTAT 59.124 41.667 0.00 0.00 0.00 1.40
342 589 5.006746 CACCGCCACTACTTCAGAATTTATC 59.993 44.000 0.00 0.00 0.00 1.75
343 590 5.104900 ACCGCCACTACTTCAGAATTTATCT 60.105 40.000 0.00 0.00 39.68 1.98
373 620 9.554724 TTTGTTCATTTATCTGAATTAGCGAAC 57.445 29.630 0.00 0.00 37.47 3.95
374 621 8.262715 TGTTCATTTATCTGAATTAGCGAACA 57.737 30.769 0.00 0.00 37.47 3.18
375 622 8.726068 TGTTCATTTATCTGAATTAGCGAACAA 58.274 29.630 0.00 0.00 36.88 2.83
376 623 9.554724 GTTCATTTATCTGAATTAGCGAACAAA 57.445 29.630 0.00 0.00 37.47 2.83
377 624 9.554724 TTCATTTATCTGAATTAGCGAACAAAC 57.445 29.630 0.00 0.00 30.34 2.93
378 625 8.726068 TCATTTATCTGAATTAGCGAACAAACA 58.274 29.630 0.00 0.00 0.00 2.83
379 626 8.788813 CATTTATCTGAATTAGCGAACAAACAC 58.211 33.333 0.00 0.00 0.00 3.32
380 627 5.940192 ATCTGAATTAGCGAACAAACACA 57.060 34.783 0.00 0.00 0.00 3.72
381 628 5.090652 TCTGAATTAGCGAACAAACACAC 57.909 39.130 0.00 0.00 0.00 3.82
382 629 4.814234 TCTGAATTAGCGAACAAACACACT 59.186 37.500 0.00 0.00 0.00 3.55
383 630 5.986741 TCTGAATTAGCGAACAAACACACTA 59.013 36.000 0.00 0.00 0.00 2.74
384 631 6.480651 TCTGAATTAGCGAACAAACACACTAA 59.519 34.615 0.00 0.00 0.00 2.24
385 632 7.011576 TCTGAATTAGCGAACAAACACACTAAA 59.988 33.333 0.00 0.00 0.00 1.85
386 633 7.473366 TGAATTAGCGAACAAACACACTAAAA 58.527 30.769 0.00 0.00 0.00 1.52
387 634 7.429920 TGAATTAGCGAACAAACACACTAAAAC 59.570 33.333 0.00 0.00 0.00 2.43
388 635 4.688511 AGCGAACAAACACACTAAAACA 57.311 36.364 0.00 0.00 0.00 2.83
389 636 4.408694 AGCGAACAAACACACTAAAACAC 58.591 39.130 0.00 0.00 0.00 3.32
390 637 4.083217 AGCGAACAAACACACTAAAACACA 60.083 37.500 0.00 0.00 0.00 3.72
391 638 4.029750 GCGAACAAACACACTAAAACACAC 59.970 41.667 0.00 0.00 0.00 3.82
392 639 5.387279 CGAACAAACACACTAAAACACACT 58.613 37.500 0.00 0.00 0.00 3.55
393 640 6.535811 CGAACAAACACACTAAAACACACTA 58.464 36.000 0.00 0.00 0.00 2.74
394 641 7.016466 CGAACAAACACACTAAAACACACTAA 58.984 34.615 0.00 0.00 0.00 2.24
395 642 7.534578 CGAACAAACACACTAAAACACACTAAA 59.465 33.333 0.00 0.00 0.00 1.85
396 643 9.182933 GAACAAACACACTAAAACACACTAAAA 57.817 29.630 0.00 0.00 0.00 1.52
397 644 8.510132 ACAAACACACTAAAACACACTAAAAC 57.490 30.769 0.00 0.00 0.00 2.43
398 645 8.136165 ACAAACACACTAAAACACACTAAAACA 58.864 29.630 0.00 0.00 0.00 2.83
399 646 9.134734 CAAACACACTAAAACACACTAAAACAT 57.865 29.630 0.00 0.00 0.00 2.71
425 672 3.660111 GGCGTCGGCACAAGCTTT 61.660 61.111 14.73 0.00 42.47 3.51
444 691 4.441087 GCTTTGGCTCAAGACTTTTAAACG 59.559 41.667 1.67 0.00 35.22 3.60
448 695 4.219802 GGCTCAAGACTTTTAAACGCTTC 58.780 43.478 0.00 0.00 0.00 3.86
461 708 2.785258 GCTTCGCGAACCATGACC 59.215 61.111 19.38 0.00 0.00 4.02
462 709 2.750888 GCTTCGCGAACCATGACCC 61.751 63.158 19.38 0.00 0.00 4.46
484 735 2.848302 CGCGATTTGCAAATCTTCTTCC 59.152 45.455 36.55 21.51 46.97 3.46
489 740 6.400409 GCGATTTGCAAATCTTCTTCCTTTTC 60.400 38.462 36.55 17.16 45.45 2.29
495 746 5.563671 GCAAATCTTCTTCCTTTTCGCTCTT 60.564 40.000 0.00 0.00 0.00 2.85
525 777 5.127031 GCCTGCTTTACATGATTCCCTTTTA 59.873 40.000 0.00 0.00 0.00 1.52
558 810 1.276421 TCAGCCGGAAGAGAAAAGGAG 59.724 52.381 5.05 0.00 0.00 3.69
559 811 1.276421 CAGCCGGAAGAGAAAAGGAGA 59.724 52.381 5.05 0.00 0.00 3.71
567 819 6.981559 CCGGAAGAGAAAAGGAGACTATAAAG 59.018 42.308 0.00 0.00 42.68 1.85
602 854 6.287525 TGAAAGGAAAGCATTTAAAACAGGG 58.712 36.000 0.00 0.00 39.27 4.45
631 883 3.016736 ACACAGGAGGAACAACAACAAG 58.983 45.455 0.00 0.00 0.00 3.16
640 892 6.072673 GGAGGAACAACAACAAGATACGAAAT 60.073 38.462 0.00 0.00 0.00 2.17
641 893 6.668323 AGGAACAACAACAAGATACGAAATG 58.332 36.000 0.00 0.00 0.00 2.32
644 896 7.112984 GGAACAACAACAAGATACGAAATGAAC 59.887 37.037 0.00 0.00 0.00 3.18
647 899 5.689819 ACAACAAGATACGAAATGAACAGC 58.310 37.500 0.00 0.00 0.00 4.40
648 900 4.946784 ACAAGATACGAAATGAACAGCC 57.053 40.909 0.00 0.00 0.00 4.85
649 901 4.579869 ACAAGATACGAAATGAACAGCCT 58.420 39.130 0.00 0.00 0.00 4.58
676 944 7.896383 TTTGCCAAGCTTTAATGATATACCT 57.104 32.000 0.00 0.00 0.00 3.08
706 974 8.607441 AAAATAAACAGGAAAGGAAAGCATTC 57.393 30.769 0.00 0.00 34.66 2.67
713 981 8.593945 ACAGGAAAGGAAAGCATTCATTTATA 57.406 30.769 13.53 0.00 46.28 0.98
767 1035 4.388499 GCCGGTCTCTTTCGCCCA 62.388 66.667 1.90 0.00 0.00 5.36
778 1046 2.420466 TTTCGCCCACCTTTCTCCCC 62.420 60.000 0.00 0.00 0.00 4.81
780 1048 3.264845 GCCCACCTTTCTCCCCCA 61.265 66.667 0.00 0.00 0.00 4.96
782 1050 2.096168 CCCACCTTTCTCCCCCATT 58.904 57.895 0.00 0.00 0.00 3.16
783 1051 0.324645 CCCACCTTTCTCCCCCATTG 60.325 60.000 0.00 0.00 0.00 2.82
784 1052 0.324645 CCACCTTTCTCCCCCATTGG 60.325 60.000 0.00 0.00 0.00 3.16
835 1108 1.448540 CTCACGCGCTTCCCAGATT 60.449 57.895 5.73 0.00 0.00 2.40
903 1182 5.126061 AGCTTCACATTCTTCTCTCTCTCTC 59.874 44.000 0.00 0.00 0.00 3.20
907 1186 4.339247 CACATTCTTCTCTCTCTCTCCTCC 59.661 50.000 0.00 0.00 0.00 4.30
908 1187 3.662759 TTCTTCTCTCTCTCTCCTCCC 57.337 52.381 0.00 0.00 0.00 4.30
909 1188 2.567862 TCTTCTCTCTCTCTCCTCCCA 58.432 52.381 0.00 0.00 0.00 4.37
911 1190 3.531397 TCTTCTCTCTCTCTCCTCCCATT 59.469 47.826 0.00 0.00 0.00 3.16
912 1191 3.593442 TCTCTCTCTCTCCTCCCATTC 57.407 52.381 0.00 0.00 0.00 2.67
913 1192 2.158682 TCTCTCTCTCTCCTCCCATTCG 60.159 54.545 0.00 0.00 0.00 3.34
914 1193 1.133637 TCTCTCTCTCCTCCCATTCGG 60.134 57.143 0.00 0.00 0.00 4.30
915 1194 0.631753 TCTCTCTCCTCCCATTCGGT 59.368 55.000 0.00 0.00 0.00 4.69
916 1195 1.036707 CTCTCTCCTCCCATTCGGTC 58.963 60.000 0.00 0.00 0.00 4.79
917 1196 0.397254 TCTCTCCTCCCATTCGGTCC 60.397 60.000 0.00 0.00 0.00 4.46
1037 1668 3.764466 CTCGCTCCACCGGCTTCT 61.764 66.667 0.00 0.00 0.00 2.85
1039 1670 4.821589 CGCTCCACCGGCTTCTCC 62.822 72.222 0.00 0.00 0.00 3.71
1056 1702 4.819761 CTGCCGCCGCTGCTTCTA 62.820 66.667 8.32 0.00 35.36 2.10
1066 1721 1.367599 GCTGCTTCTAGTGCTGCTGG 61.368 60.000 23.34 9.62 46.79 4.85
1074 1729 1.191489 TAGTGCTGCTGGTGCTGGTA 61.191 55.000 0.00 0.00 40.48 3.25
1124 1779 2.035940 AGGTCCGCCGTCTTCTCT 59.964 61.111 0.00 0.00 40.50 3.10
1138 1793 4.806247 CGTCTTCTCTATGGATTTTCGCTT 59.194 41.667 0.00 0.00 0.00 4.68
1139 1794 5.292101 CGTCTTCTCTATGGATTTTCGCTTT 59.708 40.000 0.00 0.00 0.00 3.51
1140 1795 6.481984 GTCTTCTCTATGGATTTTCGCTTTG 58.518 40.000 0.00 0.00 0.00 2.77
1141 1796 4.882671 TCTCTATGGATTTTCGCTTTGC 57.117 40.909 0.00 0.00 0.00 3.68
1142 1797 4.517285 TCTCTATGGATTTTCGCTTTGCT 58.483 39.130 0.00 0.00 0.00 3.91
1201 1856 3.386078 GTGATCCAGGTGAGCTGATTCTA 59.614 47.826 14.03 0.00 0.00 2.10
1217 1876 0.673644 TCTAGGCGCTCTTGGTTTGC 60.674 55.000 7.64 0.00 0.00 3.68
1325 1990 1.079888 GGCGCCCTTGGTGATTTTG 60.080 57.895 18.11 0.00 34.74 2.44
1326 1991 1.665442 GCGCCCTTGGTGATTTTGT 59.335 52.632 0.00 0.00 34.74 2.83
1331 1996 3.005367 CGCCCTTGGTGATTTTGTTACTT 59.995 43.478 0.00 0.00 34.74 2.24
1335 2000 5.301805 CCCTTGGTGATTTTGTTACTTCTGT 59.698 40.000 0.00 0.00 0.00 3.41
1388 2075 7.441836 AGCTTGGGTTCGAATTTTATTTTCTT 58.558 30.769 0.00 0.00 0.00 2.52
1406 2099 5.890424 TTCTTGATTTTTATCGGGGTGTC 57.110 39.130 0.00 0.00 0.00 3.67
1560 2255 2.238521 GGAAAGGTGGCACAAATCTGA 58.761 47.619 20.82 0.00 44.16 3.27
1565 2260 0.251341 GTGGCACAAATCTGAGGGGT 60.251 55.000 13.86 0.00 44.16 4.95
1646 2343 2.614057 CCAGCATCTGAAACGGGATTAC 59.386 50.000 0.00 0.00 32.44 1.89
1809 2521 7.787725 AAGTGTTTCTTACTCAAGTGTAAGG 57.212 36.000 17.17 4.63 45.51 2.69
1848 2560 1.331756 GACGAGCCACCAAATATGCAG 59.668 52.381 0.00 0.00 0.00 4.41
1849 2561 0.664761 CGAGCCACCAAATATGCAGG 59.335 55.000 0.00 0.00 0.00 4.85
1962 2674 0.179020 TTCCACCACAGTTCCTGCAG 60.179 55.000 6.78 6.78 34.37 4.41
1987 2708 0.819259 GCACAGGCACCACAGAAGAA 60.819 55.000 0.00 0.00 40.72 2.52
1991 2712 0.546122 AGGCACCACAGAAGAACACA 59.454 50.000 0.00 0.00 0.00 3.72
2046 2767 0.745486 CATCACCATCGCCTTCAGCA 60.745 55.000 0.00 0.00 44.04 4.41
2073 2794 1.689233 ATCGCTAGCCCCTCCACAA 60.689 57.895 9.66 0.00 0.00 3.33
2078 2799 0.753111 CTAGCCCCTCCACAATTGGC 60.753 60.000 10.83 1.17 43.56 4.52
2080 2801 2.772924 CCCCTCCACAATTGGCCT 59.227 61.111 10.83 0.00 43.56 5.19
2109 2830 3.808218 TTCCACCCCACAGCCAAGC 62.808 63.158 0.00 0.00 0.00 4.01
2150 2871 2.524306 CCCAGTCAACCCTTTGCATAA 58.476 47.619 0.00 0.00 32.17 1.90
2179 2900 0.896226 GAGAGCCTACGGTTTGGTCT 59.104 55.000 9.98 9.98 0.00 3.85
2190 2911 3.842925 TTTGGTCTCGGCAGGTGGC 62.843 63.158 0.00 0.00 43.74 5.01
2216 2937 2.360350 CCTTGTCATGGCAGCGGT 60.360 61.111 0.00 0.00 0.00 5.68
2268 2989 0.321653 GTACTGTGAGGCCTTGGGTG 60.322 60.000 6.77 0.00 0.00 4.61
2314 3035 3.370061 GCGAGTATTTGTGACAGGTAACC 59.630 47.826 0.00 0.00 37.17 2.85
2315 3036 4.562082 CGAGTATTTGTGACAGGTAACCA 58.438 43.478 0.00 0.00 37.17 3.67
2316 3037 5.175859 CGAGTATTTGTGACAGGTAACCAT 58.824 41.667 0.00 0.00 37.17 3.55
2331 3055 6.375455 CAGGTAACCATCTTTCTATTTGTGCT 59.625 38.462 0.00 0.00 37.17 4.40
2486 3210 1.327764 GTTCTACGGCTAACTGCATGC 59.672 52.381 11.82 11.82 45.15 4.06
2515 3239 1.880027 GGAACATTGTCAAGCGGAGTT 59.120 47.619 0.00 0.00 0.00 3.01
2524 3248 2.742053 GTCAAGCGGAGTTGAAATAGCA 59.258 45.455 0.00 0.00 38.17 3.49
2548 3272 7.698130 GCAGTTGTGTCAAGTTTAATATCATCC 59.302 37.037 0.00 0.00 0.00 3.51
2550 3274 8.950210 AGTTGTGTCAAGTTTAATATCATCCAG 58.050 33.333 0.00 0.00 0.00 3.86
2598 3322 5.649970 TCCCAGTACAGGAAAAAGGTAAA 57.350 39.130 5.75 0.00 0.00 2.01
2623 3349 2.350522 CACTGACCTCCTTATGCACAC 58.649 52.381 0.00 0.00 0.00 3.82
2624 3350 1.977854 ACTGACCTCCTTATGCACACA 59.022 47.619 0.00 0.00 0.00 3.72
2626 3352 3.774766 ACTGACCTCCTTATGCACACATA 59.225 43.478 0.00 0.00 37.74 2.29
2627 3353 4.410228 ACTGACCTCCTTATGCACACATAT 59.590 41.667 0.00 0.00 38.55 1.78
2628 3354 5.602561 ACTGACCTCCTTATGCACACATATA 59.397 40.000 0.00 0.00 38.55 0.86
2631 3357 7.161404 TGACCTCCTTATGCACACATATATTC 58.839 38.462 0.00 0.00 38.55 1.75
2635 3361 5.939883 TCCTTATGCACACATATATTCTGCC 59.060 40.000 0.00 0.00 38.55 4.85
2665 3396 2.380084 TGACTGAAACGGCTATGGTC 57.620 50.000 0.00 0.00 0.00 4.02
2871 3616 5.698089 TGTCAACAGAATGATTCAGACACTC 59.302 40.000 8.03 0.00 39.69 3.51
2896 3641 9.585099 TCCAACAATTTCAGTATTTGATAATGC 57.415 29.630 0.00 0.00 35.27 3.56
2930 3675 3.919216 TGCAGTTAGAGAAGCTGAGAAC 58.081 45.455 0.00 0.00 32.39 3.01
2931 3676 3.576118 TGCAGTTAGAGAAGCTGAGAACT 59.424 43.478 0.00 0.00 32.39 3.01
2978 3723 1.550524 TCGATGGGGATAGCATACTGC 59.449 52.381 0.00 0.00 45.46 4.40
3017 3762 4.752879 AATCCACCCGTCGTGCCG 62.753 66.667 0.00 0.00 41.53 5.69
3038 3783 1.149148 GGAGCTTCGACTCAACAACC 58.851 55.000 5.51 0.00 38.50 3.77
3117 3862 1.539065 CCAAGGGATCTGATTCCGTCG 60.539 57.143 9.34 2.33 36.58 5.12
3137 3882 1.921243 CCGACGACTGCATCATGTTA 58.079 50.000 0.00 0.00 0.00 2.41
3200 3945 2.094649 GGAGATATTAACCGGGAGAGCG 60.095 54.545 6.32 0.00 0.00 5.03
3230 4770 1.078848 GCAAGACCTGCCACTCGAT 60.079 57.895 0.00 0.00 46.13 3.59
3253 4793 1.676006 GTGGGCGTCCATCTATTTTGG 59.324 52.381 14.23 0.00 46.09 3.28
3281 4821 2.692817 GCCTCTTGCAGAGCTGATC 58.307 57.895 0.85 0.00 40.98 2.92
3514 5054 2.291800 CCTGAATGGTGAATCCCTTGGT 60.292 50.000 0.00 0.00 34.77 3.67
3570 5110 4.260743 GGATTCTTTGGTTTGCTTTGTTGC 60.261 41.667 0.00 0.00 0.00 4.17
3602 5142 2.689553 AAAGTTGGTTGTGGCTTTGG 57.310 45.000 0.00 0.00 30.97 3.28
3666 5206 0.173255 CCTGCCGGCAAATTTAGTGG 59.827 55.000 32.09 21.28 0.00 4.00
3667 5207 1.173043 CTGCCGGCAAATTTAGTGGA 58.827 50.000 32.09 1.95 0.00 4.02
3688 5228 1.975680 AGTAAACGGGGAGATGTGTGT 59.024 47.619 0.00 0.00 0.00 3.72
3692 5232 1.604604 ACGGGGAGATGTGTGTTTTG 58.395 50.000 0.00 0.00 0.00 2.44
3737 5277 5.951148 TGATCAATTCTTGGGCAAACATCTA 59.049 36.000 0.00 0.00 0.00 1.98
3738 5278 5.643379 TCAATTCTTGGGCAAACATCTAC 57.357 39.130 0.00 0.00 0.00 2.59
3739 5279 5.324409 TCAATTCTTGGGCAAACATCTACT 58.676 37.500 0.00 0.00 0.00 2.57
3740 5280 5.415701 TCAATTCTTGGGCAAACATCTACTC 59.584 40.000 0.00 0.00 0.00 2.59
3741 5281 4.640771 TTCTTGGGCAAACATCTACTCT 57.359 40.909 0.00 0.00 0.00 3.24
3742 5282 4.207891 TCTTGGGCAAACATCTACTCTC 57.792 45.455 0.00 0.00 0.00 3.20
3743 5283 3.840666 TCTTGGGCAAACATCTACTCTCT 59.159 43.478 0.00 0.00 0.00 3.10
3744 5284 3.895232 TGGGCAAACATCTACTCTCTC 57.105 47.619 0.00 0.00 0.00 3.20
3745 5285 2.501723 TGGGCAAACATCTACTCTCTCC 59.498 50.000 0.00 0.00 0.00 3.71
3746 5286 2.482142 GGGCAAACATCTACTCTCTCCG 60.482 54.545 0.00 0.00 0.00 4.63
3747 5287 2.166664 GGCAAACATCTACTCTCTCCGT 59.833 50.000 0.00 0.00 0.00 4.69
3748 5288 3.368531 GGCAAACATCTACTCTCTCCGTT 60.369 47.826 0.00 0.00 0.00 4.44
3749 5289 4.246458 GCAAACATCTACTCTCTCCGTTT 58.754 43.478 0.00 0.00 0.00 3.60
3750 5290 4.691216 GCAAACATCTACTCTCTCCGTTTT 59.309 41.667 0.00 0.00 0.00 2.43
3751 5291 5.867716 GCAAACATCTACTCTCTCCGTTTTA 59.132 40.000 0.00 0.00 0.00 1.52
3752 5292 6.367969 GCAAACATCTACTCTCTCCGTTTTAA 59.632 38.462 0.00 0.00 0.00 1.52
3753 5293 7.095355 GCAAACATCTACTCTCTCCGTTTTAAA 60.095 37.037 0.00 0.00 0.00 1.52
3754 5294 8.770828 CAAACATCTACTCTCTCCGTTTTAAAA 58.229 33.333 0.00 0.00 0.00 1.52
3755 5295 9.503399 AAACATCTACTCTCTCCGTTTTAAAAT 57.497 29.630 3.52 0.00 0.00 1.82
3757 5297 9.804758 ACATCTACTCTCTCCGTTTTAAAATAG 57.195 33.333 3.52 3.18 0.00 1.73
3762 5302 8.705048 ACTCTCTCCGTTTTAAAATAGATGAC 57.295 34.615 3.52 0.00 0.00 3.06
3763 5303 8.532819 ACTCTCTCCGTTTTAAAATAGATGACT 58.467 33.333 3.52 0.00 0.00 3.41
3764 5304 8.928270 TCTCTCCGTTTTAAAATAGATGACTC 57.072 34.615 3.52 0.00 0.00 3.36
3765 5305 8.528643 TCTCTCCGTTTTAAAATAGATGACTCA 58.471 33.333 3.52 0.00 0.00 3.41
3766 5306 9.151471 CTCTCCGTTTTAAAATAGATGACTCAA 57.849 33.333 3.52 0.00 0.00 3.02
3767 5307 8.932791 TCTCCGTTTTAAAATAGATGACTCAAC 58.067 33.333 3.52 0.00 0.00 3.18
3768 5308 8.842358 TCCGTTTTAAAATAGATGACTCAACT 57.158 30.769 3.52 0.00 0.00 3.16
3769 5309 8.932791 TCCGTTTTAAAATAGATGACTCAACTC 58.067 33.333 3.52 0.00 0.00 3.01
3770 5310 8.717821 CCGTTTTAAAATAGATGACTCAACTCA 58.282 33.333 3.52 0.00 0.00 3.41
3782 5322 8.412608 GATGACTCAACTCATCTATTTTTCGA 57.587 34.615 2.52 0.00 42.32 3.71
3783 5323 8.954950 ATGACTCAACTCATCTATTTTTCGAT 57.045 30.769 0.00 0.00 0.00 3.59
3785 5325 9.869757 TGACTCAACTCATCTATTTTTCGATAA 57.130 29.630 0.00 0.00 0.00 1.75
3787 5327 9.099454 ACTCAACTCATCTATTTTTCGATAACC 57.901 33.333 0.00 0.00 0.00 2.85
3788 5328 9.319143 CTCAACTCATCTATTTTTCGATAACCT 57.681 33.333 0.00 0.00 0.00 3.50
3789 5329 9.098355 TCAACTCATCTATTTTTCGATAACCTG 57.902 33.333 0.00 0.00 0.00 4.00
3790 5330 8.338259 CAACTCATCTATTTTTCGATAACCTGG 58.662 37.037 0.00 0.00 0.00 4.45
3791 5331 6.483640 ACTCATCTATTTTTCGATAACCTGGC 59.516 38.462 0.00 0.00 0.00 4.85
3792 5332 5.465390 TCATCTATTTTTCGATAACCTGGCG 59.535 40.000 0.00 0.00 0.00 5.69
3793 5333 5.013568 TCTATTTTTCGATAACCTGGCGA 57.986 39.130 0.00 0.00 0.00 5.54
3794 5334 5.607477 TCTATTTTTCGATAACCTGGCGAT 58.393 37.500 0.00 0.00 33.71 4.58
3795 5335 4.552166 ATTTTTCGATAACCTGGCGATG 57.448 40.909 0.00 0.00 33.71 3.84
3796 5336 2.684001 TTTCGATAACCTGGCGATGT 57.316 45.000 0.00 0.00 33.71 3.06
3797 5337 2.684001 TTCGATAACCTGGCGATGTT 57.316 45.000 0.00 0.00 33.71 2.71
3798 5338 2.218953 TCGATAACCTGGCGATGTTC 57.781 50.000 0.00 0.00 0.00 3.18
3799 5339 1.202486 TCGATAACCTGGCGATGTTCC 60.202 52.381 0.00 0.00 0.00 3.62
3800 5340 1.472552 CGATAACCTGGCGATGTTCCA 60.473 52.381 0.00 0.00 0.00 3.53
3804 5344 3.895025 CTGGCGATGTTCCAGTGG 58.105 61.111 1.40 1.40 44.62 4.00
3805 5345 1.296392 CTGGCGATGTTCCAGTGGA 59.704 57.895 8.12 8.12 44.62 4.02
3806 5346 1.003839 TGGCGATGTTCCAGTGGAC 60.004 57.895 12.69 8.06 0.00 4.02
3807 5347 1.003839 GGCGATGTTCCAGTGGACA 60.004 57.895 12.69 13.72 0.00 4.02
3808 5348 0.392998 GGCGATGTTCCAGTGGACAT 60.393 55.000 20.51 20.51 0.00 3.06
3809 5349 0.729116 GCGATGTTCCAGTGGACATG 59.271 55.000 23.59 17.86 0.00 3.21
3810 5350 0.729116 CGATGTTCCAGTGGACATGC 59.271 55.000 23.59 16.26 0.00 4.06
3811 5351 1.676916 CGATGTTCCAGTGGACATGCT 60.677 52.381 23.59 8.35 0.00 3.79
3812 5352 2.012673 GATGTTCCAGTGGACATGCTC 58.987 52.381 23.59 12.24 0.00 4.26
3813 5353 1.059098 TGTTCCAGTGGACATGCTCT 58.941 50.000 12.69 0.00 0.00 4.09
3814 5354 1.271001 TGTTCCAGTGGACATGCTCTG 60.271 52.381 12.69 0.00 0.00 3.35
3815 5355 0.325933 TTCCAGTGGACATGCTCTGG 59.674 55.000 12.69 13.56 46.00 3.86
3816 5356 1.748122 CCAGTGGACATGCTCTGGC 60.748 63.158 1.68 0.00 40.43 4.85
3817 5357 2.104859 CAGTGGACATGCTCTGGCG 61.105 63.158 0.00 0.00 42.25 5.69
3818 5358 2.821366 GTGGACATGCTCTGGCGG 60.821 66.667 0.00 0.00 42.25 6.13
3819 5359 3.321648 TGGACATGCTCTGGCGGT 61.322 61.111 0.00 0.00 42.25 5.68
3820 5360 2.512515 GGACATGCTCTGGCGGTC 60.513 66.667 0.00 0.00 41.48 4.79
3821 5361 2.581354 GACATGCTCTGGCGGTCT 59.419 61.111 0.00 0.00 40.12 3.85
3822 5362 1.520342 GACATGCTCTGGCGGTCTC 60.520 63.158 0.00 0.00 40.12 3.36
3823 5363 2.202987 CATGCTCTGGCGGTCTCC 60.203 66.667 0.00 0.00 42.25 3.71
3833 5373 2.261671 CGGTCTCCGTCCACCTTG 59.738 66.667 0.00 0.00 42.73 3.61
3834 5374 2.047179 GGTCTCCGTCCACCTTGC 60.047 66.667 0.00 0.00 0.00 4.01
3835 5375 2.584391 GGTCTCCGTCCACCTTGCT 61.584 63.158 0.00 0.00 0.00 3.91
3836 5376 1.079750 GTCTCCGTCCACCTTGCTC 60.080 63.158 0.00 0.00 0.00 4.26
3837 5377 1.533033 TCTCCGTCCACCTTGCTCA 60.533 57.895 0.00 0.00 0.00 4.26
3838 5378 1.374758 CTCCGTCCACCTTGCTCAC 60.375 63.158 0.00 0.00 0.00 3.51
3839 5379 2.358737 CCGTCCACCTTGCTCACC 60.359 66.667 0.00 0.00 0.00 4.02
3840 5380 2.743718 CGTCCACCTTGCTCACCT 59.256 61.111 0.00 0.00 0.00 4.00
3841 5381 1.541310 CCGTCCACCTTGCTCACCTA 61.541 60.000 0.00 0.00 0.00 3.08
3842 5382 0.320374 CGTCCACCTTGCTCACCTAA 59.680 55.000 0.00 0.00 0.00 2.69
3843 5383 1.809684 GTCCACCTTGCTCACCTAAC 58.190 55.000 0.00 0.00 0.00 2.34
3844 5384 0.690762 TCCACCTTGCTCACCTAACC 59.309 55.000 0.00 0.00 0.00 2.85
3845 5385 0.400213 CCACCTTGCTCACCTAACCA 59.600 55.000 0.00 0.00 0.00 3.67
3846 5386 1.611673 CCACCTTGCTCACCTAACCAG 60.612 57.143 0.00 0.00 0.00 4.00
3847 5387 0.036875 ACCTTGCTCACCTAACCAGC 59.963 55.000 0.00 0.00 0.00 4.85
3848 5388 1.021390 CCTTGCTCACCTAACCAGCG 61.021 60.000 0.00 0.00 35.81 5.18
3849 5389 0.320771 CTTGCTCACCTAACCAGCGT 60.321 55.000 0.00 0.00 35.81 5.07
3850 5390 0.320421 TTGCTCACCTAACCAGCGTC 60.320 55.000 0.00 0.00 35.81 5.19
3851 5391 1.448013 GCTCACCTAACCAGCGTCC 60.448 63.158 0.00 0.00 0.00 4.79
3852 5392 1.218316 CTCACCTAACCAGCGTCCC 59.782 63.158 0.00 0.00 0.00 4.46
3853 5393 1.229082 TCACCTAACCAGCGTCCCT 60.229 57.895 0.00 0.00 0.00 4.20
3854 5394 0.834687 TCACCTAACCAGCGTCCCTT 60.835 55.000 0.00 0.00 0.00 3.95
3855 5395 0.899720 CACCTAACCAGCGTCCCTTA 59.100 55.000 0.00 0.00 0.00 2.69
3856 5396 0.900421 ACCTAACCAGCGTCCCTTAC 59.100 55.000 0.00 0.00 0.00 2.34
3857 5397 0.899720 CCTAACCAGCGTCCCTTACA 59.100 55.000 0.00 0.00 0.00 2.41
3858 5398 1.276989 CCTAACCAGCGTCCCTTACAA 59.723 52.381 0.00 0.00 0.00 2.41
3859 5399 2.618053 CTAACCAGCGTCCCTTACAAG 58.382 52.381 0.00 0.00 0.00 3.16
3860 5400 1.053424 AACCAGCGTCCCTTACAAGA 58.947 50.000 0.00 0.00 0.00 3.02
3861 5401 0.320697 ACCAGCGTCCCTTACAAGAC 59.679 55.000 0.00 0.00 0.00 3.01
3867 5407 2.712057 GTCCCTTACAAGACGTCGAA 57.288 50.000 10.46 2.68 0.00 3.71
3868 5408 2.593257 GTCCCTTACAAGACGTCGAAG 58.407 52.381 10.46 11.86 0.00 3.79
3869 5409 2.030451 GTCCCTTACAAGACGTCGAAGT 60.030 50.000 10.46 2.87 0.00 3.01
3870 5410 2.030540 TCCCTTACAAGACGTCGAAGTG 60.031 50.000 9.23 9.68 0.00 3.16
3871 5411 2.325761 CCTTACAAGACGTCGAAGTGG 58.674 52.381 9.23 6.07 0.00 4.00
3872 5412 2.030540 CCTTACAAGACGTCGAAGTGGA 60.031 50.000 9.23 1.05 0.00 4.02
3873 5413 3.551454 CCTTACAAGACGTCGAAGTGGAA 60.551 47.826 9.23 9.15 0.00 3.53
3874 5414 2.135664 ACAAGACGTCGAAGTGGAAG 57.864 50.000 9.23 0.00 0.00 3.46
3875 5415 0.784778 CAAGACGTCGAAGTGGAAGC 59.215 55.000 9.23 0.00 0.00 3.86
3876 5416 0.674534 AAGACGTCGAAGTGGAAGCT 59.325 50.000 9.23 0.00 0.00 3.74
3877 5417 0.039074 AGACGTCGAAGTGGAAGCTG 60.039 55.000 9.23 0.00 0.00 4.24
3878 5418 1.006102 ACGTCGAAGTGGAAGCTGG 60.006 57.895 2.31 0.00 0.00 4.85
3879 5419 1.738099 CGTCGAAGTGGAAGCTGGG 60.738 63.158 0.00 0.00 0.00 4.45
3880 5420 1.671742 GTCGAAGTGGAAGCTGGGA 59.328 57.895 0.00 0.00 0.00 4.37
3881 5421 0.670854 GTCGAAGTGGAAGCTGGGAC 60.671 60.000 0.00 0.00 0.00 4.46
3882 5422 0.832135 TCGAAGTGGAAGCTGGGACT 60.832 55.000 0.00 0.00 0.00 3.85
3883 5423 0.671781 CGAAGTGGAAGCTGGGACTG 60.672 60.000 0.00 0.00 0.00 3.51
3892 5432 2.124983 CTGGGACTGCATCACCCG 60.125 66.667 15.10 8.56 45.91 5.28
3893 5433 2.927856 TGGGACTGCATCACCCGT 60.928 61.111 15.10 0.00 45.91 5.28
3894 5434 2.436646 GGGACTGCATCACCCGTG 60.437 66.667 7.14 0.00 34.03 4.94
3895 5435 3.127533 GGACTGCATCACCCGTGC 61.128 66.667 0.00 0.00 42.81 5.34
3900 5440 2.568090 GCATCACCCGTGCAAAGG 59.432 61.111 1.69 1.69 42.08 3.11
3907 5447 3.267974 CCGTGCAAAGGGAGAAGC 58.732 61.111 1.68 0.00 0.00 3.86
3908 5448 1.600636 CCGTGCAAAGGGAGAAGCA 60.601 57.895 1.68 0.00 34.10 3.91
3910 5450 4.500265 TGCAAAGGGAGAAGCACC 57.500 55.556 0.00 0.00 31.05 5.01
3911 5451 1.600636 TGCAAAGGGAGAAGCACCG 60.601 57.895 0.00 0.00 31.05 4.94
3912 5452 1.302511 GCAAAGGGAGAAGCACCGA 60.303 57.895 0.00 0.00 0.00 4.69
3913 5453 1.301677 GCAAAGGGAGAAGCACCGAG 61.302 60.000 0.00 0.00 0.00 4.63
3914 5454 0.035458 CAAAGGGAGAAGCACCGAGT 59.965 55.000 0.00 0.00 0.00 4.18
3915 5455 0.765510 AAAGGGAGAAGCACCGAGTT 59.234 50.000 0.00 0.00 0.00 3.01
3916 5456 0.765510 AAGGGAGAAGCACCGAGTTT 59.234 50.000 0.00 0.00 0.00 2.66
3917 5457 1.640917 AGGGAGAAGCACCGAGTTTA 58.359 50.000 0.00 0.00 0.00 2.01
3918 5458 1.975680 AGGGAGAAGCACCGAGTTTAA 59.024 47.619 0.00 0.00 0.00 1.52
3919 5459 2.028020 AGGGAGAAGCACCGAGTTTAAG 60.028 50.000 0.00 0.00 0.00 1.85
3920 5460 2.289506 GGGAGAAGCACCGAGTTTAAGT 60.290 50.000 0.00 0.00 0.00 2.24
3921 5461 2.994578 GGAGAAGCACCGAGTTTAAGTC 59.005 50.000 0.00 0.00 0.00 3.01
3922 5462 2.994578 GAGAAGCACCGAGTTTAAGTCC 59.005 50.000 0.00 0.00 0.00 3.85
3923 5463 1.725164 GAAGCACCGAGTTTAAGTCCG 59.275 52.381 0.00 0.00 0.00 4.79
3924 5464 0.963962 AGCACCGAGTTTAAGTCCGA 59.036 50.000 0.00 0.00 0.00 4.55
3925 5465 1.342174 AGCACCGAGTTTAAGTCCGAA 59.658 47.619 0.00 0.00 0.00 4.30
3926 5466 1.458445 GCACCGAGTTTAAGTCCGAAC 59.542 52.381 0.00 0.00 0.00 3.95
3927 5467 2.746269 CACCGAGTTTAAGTCCGAACA 58.254 47.619 0.00 0.00 0.00 3.18
3928 5468 3.125316 CACCGAGTTTAAGTCCGAACAA 58.875 45.455 0.00 0.00 0.00 2.83
3929 5469 3.556775 CACCGAGTTTAAGTCCGAACAAA 59.443 43.478 0.00 0.00 0.00 2.83
3930 5470 4.034279 CACCGAGTTTAAGTCCGAACAAAA 59.966 41.667 0.00 0.00 0.00 2.44
3931 5471 4.635324 ACCGAGTTTAAGTCCGAACAAAAA 59.365 37.500 0.00 0.00 0.00 1.94
3948 5488 0.945813 AAACGGACGCGGATTTTTGA 59.054 45.000 12.47 0.00 0.00 2.69
3998 5538 1.807226 CAGTCCATGCATGCTGTGG 59.193 57.895 26.90 26.90 0.00 4.17
4044 5584 2.552599 TGAATACCTGAACGCCACAA 57.447 45.000 0.00 0.00 0.00 3.33
4232 6380 4.866921 GGTGGAGTTTAATTCACCAACAC 58.133 43.478 2.84 0.00 46.39 3.32
4355 6504 4.409718 TTAAGTGCAAGTGTGGTGTCTA 57.590 40.909 0.00 0.00 0.00 2.59
4456 6605 4.202151 GCAAAGTCCTGTCTTGGAAACATT 60.202 41.667 0.00 0.00 42.32 2.71
4472 6621 0.035056 CATTCCCTTGCGTCCCTCTT 60.035 55.000 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.546428 CCCAAAATTCTTGTCTTAAATTTGTCT 57.454 29.630 0.00 0.00 33.95 3.41
44 45 9.541143 TCCCAAAATTCTTGTCTTAAATTTGTC 57.459 29.630 0.00 0.00 33.95 3.18
45 46 9.898152 TTCCCAAAATTCTTGTCTTAAATTTGT 57.102 25.926 0.00 0.00 33.95 2.83
47 48 9.559732 CCTTCCCAAAATTCTTGTCTTAAATTT 57.440 29.630 0.00 0.00 34.86 1.82
48 49 8.933653 TCCTTCCCAAAATTCTTGTCTTAAATT 58.066 29.630 0.00 0.00 0.00 1.82
49 50 8.491045 TCCTTCCCAAAATTCTTGTCTTAAAT 57.509 30.769 0.00 0.00 0.00 1.40
50 51 7.015195 CCTCCTTCCCAAAATTCTTGTCTTAAA 59.985 37.037 0.00 0.00 0.00 1.52
51 52 6.493458 CCTCCTTCCCAAAATTCTTGTCTTAA 59.507 38.462 0.00 0.00 0.00 1.85
52 53 6.010219 CCTCCTTCCCAAAATTCTTGTCTTA 58.990 40.000 0.00 0.00 0.00 2.10
53 54 4.835056 CCTCCTTCCCAAAATTCTTGTCTT 59.165 41.667 0.00 0.00 0.00 3.01
54 55 4.411013 CCTCCTTCCCAAAATTCTTGTCT 58.589 43.478 0.00 0.00 0.00 3.41
55 56 3.511540 CCCTCCTTCCCAAAATTCTTGTC 59.488 47.826 0.00 0.00 0.00 3.18
56 57 3.142028 TCCCTCCTTCCCAAAATTCTTGT 59.858 43.478 0.00 0.00 0.00 3.16
57 58 3.766051 CTCCCTCCTTCCCAAAATTCTTG 59.234 47.826 0.00 0.00 0.00 3.02
58 59 3.402708 ACTCCCTCCTTCCCAAAATTCTT 59.597 43.478 0.00 0.00 0.00 2.52
59 60 2.996742 ACTCCCTCCTTCCCAAAATTCT 59.003 45.455 0.00 0.00 0.00 2.40
60 61 3.458044 ACTCCCTCCTTCCCAAAATTC 57.542 47.619 0.00 0.00 0.00 2.17
61 62 3.923425 AGTACTCCCTCCTTCCCAAAATT 59.077 43.478 0.00 0.00 0.00 1.82
62 63 3.542604 AGTACTCCCTCCTTCCCAAAAT 58.457 45.455 0.00 0.00 0.00 1.82
63 64 2.999928 AGTACTCCCTCCTTCCCAAAA 58.000 47.619 0.00 0.00 0.00 2.44
64 65 2.735259 AGTACTCCCTCCTTCCCAAA 57.265 50.000 0.00 0.00 0.00 3.28
65 66 2.626149 GCTAGTACTCCCTCCTTCCCAA 60.626 54.545 0.00 0.00 0.00 4.12
66 67 1.063114 GCTAGTACTCCCTCCTTCCCA 60.063 57.143 0.00 0.00 0.00 4.37
67 68 1.063114 TGCTAGTACTCCCTCCTTCCC 60.063 57.143 0.00 0.00 0.00 3.97
68 69 2.456073 TGCTAGTACTCCCTCCTTCC 57.544 55.000 0.00 0.00 0.00 3.46
69 70 4.083565 CCTATGCTAGTACTCCCTCCTTC 58.916 52.174 0.00 0.00 0.00 3.46
70 71 3.467863 ACCTATGCTAGTACTCCCTCCTT 59.532 47.826 0.00 0.00 0.00 3.36
71 72 3.065175 ACCTATGCTAGTACTCCCTCCT 58.935 50.000 0.00 0.00 0.00 3.69
72 73 3.529216 ACCTATGCTAGTACTCCCTCC 57.471 52.381 0.00 0.00 0.00 4.30
73 74 4.857509 CAACCTATGCTAGTACTCCCTC 57.142 50.000 0.00 0.00 0.00 4.30
86 87 2.486203 TGTTTACTTGGCGCAACCTATG 59.514 45.455 10.83 0.00 40.22 2.23
87 88 2.785562 TGTTTACTTGGCGCAACCTAT 58.214 42.857 10.83 0.00 40.22 2.57
88 89 2.257691 TGTTTACTTGGCGCAACCTA 57.742 45.000 10.83 0.00 40.22 3.08
89 90 1.394618 TTGTTTACTTGGCGCAACCT 58.605 45.000 10.83 0.00 40.22 3.50
90 91 1.855978 GTTTGTTTACTTGGCGCAACC 59.144 47.619 10.83 0.00 39.84 3.77
91 92 1.855978 GGTTTGTTTACTTGGCGCAAC 59.144 47.619 10.83 4.16 0.00 4.17
92 93 1.534175 CGGTTTGTTTACTTGGCGCAA 60.534 47.619 10.83 0.00 0.00 4.85
93 94 0.029567 CGGTTTGTTTACTTGGCGCA 59.970 50.000 10.83 0.00 0.00 6.09
94 95 0.029700 ACGGTTTGTTTACTTGGCGC 59.970 50.000 0.00 0.00 0.00 6.53
95 96 1.658094 CGACGGTTTGTTTACTTGGCG 60.658 52.381 0.00 0.00 0.00 5.69
96 97 1.331447 ACGACGGTTTGTTTACTTGGC 59.669 47.619 0.00 0.00 0.00 4.52
97 98 2.851764 GCACGACGGTTTGTTTACTTGG 60.852 50.000 0.00 0.00 0.00 3.61
178 198 2.041405 GGAGAGCTAGCCACCCCT 60.041 66.667 12.13 0.84 0.00 4.79
180 200 2.904131 GTGGAGAGCTAGCCACCC 59.096 66.667 21.28 10.39 46.91 4.61
188 208 8.958119 TTATATTGAAAATAACGTGGAGAGCT 57.042 30.769 0.00 0.00 0.00 4.09
195 215 9.910511 ACTAACGCTTATATTGAAAATAACGTG 57.089 29.630 0.00 0.00 32.35 4.49
215 268 4.621068 TTCCAGTCCGTACATACTAACG 57.379 45.455 0.00 0.00 38.80 3.18
219 272 4.261489 CGCTAATTCCAGTCCGTACATACT 60.261 45.833 0.00 0.00 0.00 2.12
220 273 3.979495 CGCTAATTCCAGTCCGTACATAC 59.021 47.826 0.00 0.00 0.00 2.39
221 274 3.884693 TCGCTAATTCCAGTCCGTACATA 59.115 43.478 0.00 0.00 0.00 2.29
222 275 2.691526 TCGCTAATTCCAGTCCGTACAT 59.308 45.455 0.00 0.00 0.00 2.29
223 276 2.093890 TCGCTAATTCCAGTCCGTACA 58.906 47.619 0.00 0.00 0.00 2.90
224 277 2.856557 GTTCGCTAATTCCAGTCCGTAC 59.143 50.000 0.00 0.00 0.00 3.67
234 287 7.429920 TGTTTTAGTGTGTTTGTTCGCTAATTC 59.570 33.333 0.00 0.00 36.81 2.17
271 324 3.680490 TGGACGTTTGGCAATTCAGATA 58.320 40.909 0.00 0.00 0.00 1.98
275 522 3.526931 TTTTGGACGTTTGGCAATTCA 57.473 38.095 0.00 0.00 0.00 2.57
303 550 3.646162 TGGCGGTGGACTATGAATTATCT 59.354 43.478 0.00 0.00 0.00 1.98
304 551 3.746492 GTGGCGGTGGACTATGAATTATC 59.254 47.826 0.00 0.00 0.00 1.75
309 556 1.479323 GTAGTGGCGGTGGACTATGAA 59.521 52.381 0.00 0.00 0.00 2.57
318 565 2.386661 ATTCTGAAGTAGTGGCGGTG 57.613 50.000 0.00 0.00 0.00 4.94
347 594 9.554724 GTTCGCTAATTCAGATAAATGAACAAA 57.445 29.630 0.00 0.00 41.76 2.83
348 595 8.726068 TGTTCGCTAATTCAGATAAATGAACAA 58.274 29.630 0.00 0.00 41.76 2.83
349 596 8.262715 TGTTCGCTAATTCAGATAAATGAACA 57.737 30.769 0.00 0.00 41.76 3.18
350 597 9.554724 TTTGTTCGCTAATTCAGATAAATGAAC 57.445 29.630 0.00 0.00 41.76 3.18
351 598 9.554724 GTTTGTTCGCTAATTCAGATAAATGAA 57.445 29.630 0.00 0.00 43.04 2.57
352 599 8.726068 TGTTTGTTCGCTAATTCAGATAAATGA 58.274 29.630 0.00 0.00 0.00 2.57
353 600 8.788813 GTGTTTGTTCGCTAATTCAGATAAATG 58.211 33.333 0.00 0.00 0.00 2.32
354 601 8.511321 TGTGTTTGTTCGCTAATTCAGATAAAT 58.489 29.630 0.00 0.00 0.00 1.40
355 602 7.801315 GTGTGTTTGTTCGCTAATTCAGATAAA 59.199 33.333 0.00 0.00 0.00 1.40
356 603 7.172532 AGTGTGTTTGTTCGCTAATTCAGATAA 59.827 33.333 0.00 0.00 0.00 1.75
357 604 6.649141 AGTGTGTTTGTTCGCTAATTCAGATA 59.351 34.615 0.00 0.00 0.00 1.98
358 605 5.470098 AGTGTGTTTGTTCGCTAATTCAGAT 59.530 36.000 0.00 0.00 0.00 2.90
359 606 4.814234 AGTGTGTTTGTTCGCTAATTCAGA 59.186 37.500 0.00 0.00 0.00 3.27
360 607 5.095691 AGTGTGTTTGTTCGCTAATTCAG 57.904 39.130 0.00 0.00 0.00 3.02
361 608 6.606234 TTAGTGTGTTTGTTCGCTAATTCA 57.394 33.333 0.00 0.00 33.58 2.57
362 609 7.429920 TGTTTTAGTGTGTTTGTTCGCTAATTC 59.570 33.333 0.00 0.00 36.81 2.17
363 610 7.219344 GTGTTTTAGTGTGTTTGTTCGCTAATT 59.781 33.333 0.00 0.00 36.81 1.40
364 611 6.689669 GTGTTTTAGTGTGTTTGTTCGCTAAT 59.310 34.615 0.00 0.00 36.81 1.73
365 612 6.022821 GTGTTTTAGTGTGTTTGTTCGCTAA 58.977 36.000 0.00 0.00 35.69 3.09
366 613 5.121925 TGTGTTTTAGTGTGTTTGTTCGCTA 59.878 36.000 0.00 0.00 0.00 4.26
367 614 4.083217 TGTGTTTTAGTGTGTTTGTTCGCT 60.083 37.500 0.00 0.00 0.00 4.93
368 615 4.029750 GTGTGTTTTAGTGTGTTTGTTCGC 59.970 41.667 0.00 0.00 0.00 4.70
369 616 5.387279 AGTGTGTTTTAGTGTGTTTGTTCG 58.613 37.500 0.00 0.00 0.00 3.95
370 617 8.730970 TTTAGTGTGTTTTAGTGTGTTTGTTC 57.269 30.769 0.00 0.00 0.00 3.18
371 618 8.970293 GTTTTAGTGTGTTTTAGTGTGTTTGTT 58.030 29.630 0.00 0.00 0.00 2.83
372 619 8.136165 TGTTTTAGTGTGTTTTAGTGTGTTTGT 58.864 29.630 0.00 0.00 0.00 2.83
373 620 8.508800 TGTTTTAGTGTGTTTTAGTGTGTTTG 57.491 30.769 0.00 0.00 0.00 2.93
374 621 9.134734 CATGTTTTAGTGTGTTTTAGTGTGTTT 57.865 29.630 0.00 0.00 0.00 2.83
375 622 7.274686 GCATGTTTTAGTGTGTTTTAGTGTGTT 59.725 33.333 0.00 0.00 0.00 3.32
376 623 6.750039 GCATGTTTTAGTGTGTTTTAGTGTGT 59.250 34.615 0.00 0.00 0.00 3.72
377 624 6.749578 TGCATGTTTTAGTGTGTTTTAGTGTG 59.250 34.615 0.00 0.00 0.00 3.82
378 625 6.857956 TGCATGTTTTAGTGTGTTTTAGTGT 58.142 32.000 0.00 0.00 0.00 3.55
379 626 6.074888 GCTGCATGTTTTAGTGTGTTTTAGTG 60.075 38.462 0.00 0.00 0.00 2.74
380 627 5.977129 GCTGCATGTTTTAGTGTGTTTTAGT 59.023 36.000 0.00 0.00 0.00 2.24
381 628 5.976534 TGCTGCATGTTTTAGTGTGTTTTAG 59.023 36.000 0.00 0.00 0.00 1.85
382 629 5.895928 TGCTGCATGTTTTAGTGTGTTTTA 58.104 33.333 0.00 0.00 0.00 1.52
383 630 4.753233 TGCTGCATGTTTTAGTGTGTTTT 58.247 34.783 0.00 0.00 0.00 2.43
384 631 4.362279 CTGCTGCATGTTTTAGTGTGTTT 58.638 39.130 1.31 0.00 0.00 2.83
385 632 3.243501 CCTGCTGCATGTTTTAGTGTGTT 60.244 43.478 1.31 0.00 0.00 3.32
386 633 2.294233 CCTGCTGCATGTTTTAGTGTGT 59.706 45.455 1.31 0.00 0.00 3.72
387 634 2.352030 CCCTGCTGCATGTTTTAGTGTG 60.352 50.000 1.31 0.00 0.00 3.82
388 635 1.888512 CCCTGCTGCATGTTTTAGTGT 59.111 47.619 1.31 0.00 0.00 3.55
389 636 1.203052 CCCCTGCTGCATGTTTTAGTG 59.797 52.381 1.31 0.00 0.00 2.74
390 637 1.549203 CCCCTGCTGCATGTTTTAGT 58.451 50.000 1.31 0.00 0.00 2.24
391 638 0.174162 GCCCCTGCTGCATGTTTTAG 59.826 55.000 1.31 0.00 33.53 1.85
392 639 1.594194 CGCCCCTGCTGCATGTTTTA 61.594 55.000 1.31 0.00 34.43 1.52
393 640 2.934570 CGCCCCTGCTGCATGTTTT 61.935 57.895 1.31 0.00 34.43 2.43
394 641 3.376078 CGCCCCTGCTGCATGTTT 61.376 61.111 1.31 0.00 34.43 2.83
395 642 4.666253 ACGCCCCTGCTGCATGTT 62.666 61.111 1.31 0.00 34.43 2.71
421 668 4.441087 CGTTTAAAAGTCTTGAGCCAAAGC 59.559 41.667 0.00 0.00 40.32 3.51
424 671 3.630312 AGCGTTTAAAAGTCTTGAGCCAA 59.370 39.130 3.09 0.00 0.00 4.52
425 672 3.211045 AGCGTTTAAAAGTCTTGAGCCA 58.789 40.909 3.09 0.00 0.00 4.75
456 703 1.247419 TTTGCAAATCGCGGGGTCAT 61.247 50.000 8.05 0.00 46.97 3.06
457 704 1.247419 ATTTGCAAATCGCGGGGTCA 61.247 50.000 18.99 0.00 46.97 4.02
458 705 0.525455 GATTTGCAAATCGCGGGGTC 60.525 55.000 30.62 12.09 46.97 4.46
459 706 1.510844 GATTTGCAAATCGCGGGGT 59.489 52.632 30.62 6.88 46.97 4.95
460 707 4.400410 GATTTGCAAATCGCGGGG 57.600 55.556 30.62 0.00 46.97 5.73
495 746 4.888326 ATCATGTAAAGCAGGCCAAAAA 57.112 36.364 5.01 0.00 0.00 1.94
511 762 7.825761 AGCAAAGGAAATTAAAAGGGAATCATG 59.174 33.333 0.00 0.00 0.00 3.07
525 777 1.273327 CCGGCTGAAGCAAAGGAAATT 59.727 47.619 4.43 0.00 44.36 1.82
578 830 6.287525 CCCTGTTTTAAATGCTTTCCTTTCA 58.712 36.000 0.00 0.00 0.00 2.69
579 831 5.179368 GCCCTGTTTTAAATGCTTTCCTTTC 59.821 40.000 0.00 0.00 0.00 2.62
613 865 4.152402 CGTATCTTGTTGTTGTTCCTCCTG 59.848 45.833 0.00 0.00 0.00 3.86
615 867 4.312443 TCGTATCTTGTTGTTGTTCCTCC 58.688 43.478 0.00 0.00 0.00 4.30
616 868 5.917541 TTCGTATCTTGTTGTTGTTCCTC 57.082 39.130 0.00 0.00 0.00 3.71
617 869 6.485313 TCATTTCGTATCTTGTTGTTGTTCCT 59.515 34.615 0.00 0.00 0.00 3.36
618 870 6.664515 TCATTTCGTATCTTGTTGTTGTTCC 58.335 36.000 0.00 0.00 0.00 3.62
619 871 7.642194 TGTTCATTTCGTATCTTGTTGTTGTTC 59.358 33.333 0.00 0.00 0.00 3.18
622 874 6.086765 GCTGTTCATTTCGTATCTTGTTGTTG 59.913 38.462 0.00 0.00 0.00 3.33
676 944 9.758651 GCTTTCCTTTCCTGTTTATTTTCTTAA 57.241 29.630 0.00 0.00 0.00 1.85
713 981 9.010029 ACAAACGTCACTCATTTTCCTATAAAT 57.990 29.630 0.00 0.00 0.00 1.40
718 986 4.446385 CGACAAACGTCACTCATTTTCCTA 59.554 41.667 0.00 0.00 37.22 2.94
767 1035 1.388133 GCCAATGGGGGAGAAAGGT 59.612 57.895 0.00 0.00 37.04 3.50
903 1182 2.444256 GGGAGGACCGAATGGGAGG 61.444 68.421 0.00 0.00 40.75 4.30
1049 1695 0.321034 CACCAGCAGCACTAGAAGCA 60.321 55.000 12.97 0.00 0.00 3.91
1056 1702 1.845627 ATACCAGCACCAGCAGCACT 61.846 55.000 0.00 0.00 45.49 4.40
1066 1721 0.103208 CAGGAGACGGATACCAGCAC 59.897 60.000 0.00 0.00 0.00 4.40
1116 1771 6.481984 CAAAGCGAAAATCCATAGAGAAGAC 58.518 40.000 0.00 0.00 0.00 3.01
1124 1779 3.193267 AGCAAGCAAAGCGAAAATCCATA 59.807 39.130 0.00 0.00 37.01 2.74
1138 1793 2.383368 ACAAACAAGCAAGCAAGCAA 57.617 40.000 3.19 0.00 36.85 3.91
1139 1794 2.383368 AACAAACAAGCAAGCAAGCA 57.617 40.000 3.19 0.00 36.85 3.91
1140 1795 2.931969 AGAAACAAACAAGCAAGCAAGC 59.068 40.909 0.00 0.00 0.00 4.01
1141 1796 5.349543 AGAAAGAAACAAACAAGCAAGCAAG 59.650 36.000 0.00 0.00 0.00 4.01
1142 1797 5.237048 AGAAAGAAACAAACAAGCAAGCAA 58.763 33.333 0.00 0.00 0.00 3.91
1201 1856 3.357079 CGCAAACCAAGAGCGCCT 61.357 61.111 2.29 0.00 45.14 5.52
1217 1876 4.504916 CCTCCTCCAGTCGCTGCG 62.505 72.222 17.25 17.25 0.00 5.18
1244 1906 2.278857 CTCGCGGTCCATTCCTCG 60.279 66.667 6.13 0.00 37.09 4.63
1281 1946 0.601046 TCGCAAGCTCACCTGAGTTG 60.601 55.000 4.26 8.19 43.85 3.16
1335 2000 9.350951 TCTCGAATTCCATGACTAATAGAGTAA 57.649 33.333 0.00 0.00 39.06 2.24
1388 2075 3.013921 GCAGACACCCCGATAAAAATCA 58.986 45.455 0.00 0.00 0.00 2.57
1406 2099 6.747280 GCCAATTTACAGTTATACAGTTGCAG 59.253 38.462 0.00 0.00 0.00 4.41
1560 2255 1.077265 CAGAAACATGGCCACCCCT 59.923 57.895 8.16 0.00 0.00 4.79
1616 2313 1.687563 TCAGATGCTGGCATGATTGG 58.312 50.000 13.04 0.00 36.70 3.16
1646 2343 3.947910 ACAGTGCCAATTCAGATTTGG 57.052 42.857 16.83 16.83 0.00 3.28
1779 2491 7.065894 CACTTGAGTAAGAAACACTTTGATCG 58.934 38.462 0.00 0.00 39.72 3.69
1809 2521 2.541762 GTCTCTTCAACTGTGAGCACAC 59.458 50.000 7.39 7.39 46.09 3.82
1848 2560 5.574443 GCAGAACAAAGAAAATATCAGTGCC 59.426 40.000 0.00 0.00 0.00 5.01
1849 2561 6.385033 AGCAGAACAAAGAAAATATCAGTGC 58.615 36.000 0.00 0.00 0.00 4.40
1854 2566 8.857216 CACATGAAGCAGAACAAAGAAAATATC 58.143 33.333 0.00 0.00 0.00 1.63
1857 2569 5.464389 GCACATGAAGCAGAACAAAGAAAAT 59.536 36.000 0.00 0.00 0.00 1.82
1977 2698 0.861837 GCGAGTGTGTTCTTCTGTGG 59.138 55.000 0.00 0.00 0.00 4.17
2150 2871 1.127343 GTAGGCTCTCCAGGAATGCT 58.873 55.000 11.77 3.23 33.74 3.79
2190 2911 0.169672 CCATGACAAGGAAAGCAGCG 59.830 55.000 0.00 0.00 0.00 5.18
2193 2914 1.250328 CTGCCATGACAAGGAAAGCA 58.750 50.000 0.00 0.00 0.00 3.91
2197 2918 1.675310 CCGCTGCCATGACAAGGAA 60.675 57.895 0.00 0.00 0.00 3.36
2216 2937 1.163420 CCGGCAGTACACAGCAAACA 61.163 55.000 0.00 0.00 0.00 2.83
2268 2989 1.302993 TTGCCCGCTTAACCCTGTC 60.303 57.895 0.00 0.00 0.00 3.51
2297 3018 7.458397 AGAAAGATGGTTACCTGTCACAAATA 58.542 34.615 2.07 0.00 0.00 1.40
2345 3069 9.578439 ACAACCGAAGTACTCTAAATATTGTAC 57.422 33.333 0.00 5.93 36.48 2.90
2486 3210 5.220662 CGCTTGACAATGTTCCCTTATACAG 60.221 44.000 0.00 0.00 0.00 2.74
2515 3239 6.449635 AAACTTGACACAACTGCTATTTCA 57.550 33.333 0.00 0.00 0.00 2.69
2524 3248 8.862325 TGGATGATATTAAACTTGACACAACT 57.138 30.769 0.00 0.00 0.00 3.16
2548 3272 6.588756 CACATTCTTTTGACCAATCATTCCTG 59.411 38.462 0.00 0.00 33.85 3.86
2550 3274 6.690530 TCACATTCTTTTGACCAATCATTCC 58.309 36.000 0.00 0.00 33.85 3.01
2598 3322 1.556911 CATAAGGAGGTCAGTGGCAGT 59.443 52.381 0.00 0.00 0.00 4.40
2626 3352 8.432013 TCAGTCAATGTGTATTAGGCAGAATAT 58.568 33.333 0.00 0.00 0.00 1.28
2627 3353 7.791029 TCAGTCAATGTGTATTAGGCAGAATA 58.209 34.615 0.00 0.00 0.00 1.75
2628 3354 6.653020 TCAGTCAATGTGTATTAGGCAGAAT 58.347 36.000 0.00 0.00 0.00 2.40
2631 3357 6.546395 GTTTCAGTCAATGTGTATTAGGCAG 58.454 40.000 0.00 0.00 0.00 4.85
2635 3361 5.351465 AGCCGTTTCAGTCAATGTGTATTAG 59.649 40.000 0.00 0.00 0.00 1.73
2665 3396 6.475076 CACTTTGGATAAACTCGAGATCTGAG 59.525 42.308 21.68 16.13 39.40 3.35
2827 3558 9.225436 GTTGACAGAGAGAAAAATTAGAAGGAT 57.775 33.333 0.00 0.00 0.00 3.24
2829 3560 8.383318 TGTTGACAGAGAGAAAAATTAGAAGG 57.617 34.615 0.00 0.00 0.00 3.46
2864 3596 7.502226 TCAAATACTGAAATTGTTGGAGTGTCT 59.498 33.333 0.00 0.00 0.00 3.41
2865 3597 7.648142 TCAAATACTGAAATTGTTGGAGTGTC 58.352 34.615 0.00 0.00 0.00 3.67
2871 3616 9.590451 AGCATTATCAAATACTGAAATTGTTGG 57.410 29.630 0.00 0.00 37.67 3.77
2896 3641 6.728200 TCTCTAACTGCAACACAATCAAAAG 58.272 36.000 0.00 0.00 0.00 2.27
2930 3675 2.124570 CGGGCCATCCAGTCCAAG 60.125 66.667 4.39 0.00 34.36 3.61
2931 3676 2.609299 TCGGGCCATCCAGTCCAA 60.609 61.111 4.39 0.00 34.36 3.53
2978 3723 0.455633 GCTTGTGCATTTGCTCGAGG 60.456 55.000 15.58 0.00 42.98 4.63
3017 3762 0.944311 TTGTTGAGTCGAAGCTCCGC 60.944 55.000 0.00 0.00 34.74 5.54
3018 3763 0.784778 GTTGTTGAGTCGAAGCTCCG 59.215 55.000 0.00 0.00 34.74 4.63
3028 3773 1.774254 TGAGGTGGATGGTTGTTGAGT 59.226 47.619 0.00 0.00 0.00 3.41
3038 3783 2.627515 AATCATCGGTGAGGTGGATG 57.372 50.000 3.97 0.00 37.87 3.51
3117 3862 1.361668 AACATGATGCAGTCGTCGGC 61.362 55.000 0.00 0.00 35.44 5.54
3130 3875 2.167662 TGCTCTCCGTGTCTAACATGA 58.832 47.619 0.00 0.00 37.29 3.07
3137 3882 4.004348 ACGATGCTCTCCGTGTCT 57.996 55.556 0.00 0.00 37.64 3.41
3200 3945 1.377856 GTCTTGCTCAGGGAAGGGC 60.378 63.158 0.00 0.00 40.57 5.19
3227 4767 1.592669 GATGGACGCCCACTGATCG 60.593 63.158 0.00 0.00 46.98 3.69
3230 4770 1.496060 AATAGATGGACGCCCACTGA 58.504 50.000 0.00 0.00 46.98 3.41
3514 5054 0.991920 GGGGAAATGGACTGGACTGA 59.008 55.000 0.00 0.00 0.00 3.41
3570 5110 5.357032 ACAACCAACTTTTCAGTACAAGGAG 59.643 40.000 0.00 0.00 30.68 3.69
3602 5142 2.334838 CCACTACTACACGTTCAAGCC 58.665 52.381 0.00 0.00 0.00 4.35
3666 5206 3.000727 CACACATCTCCCCGTTTACTTC 58.999 50.000 0.00 0.00 0.00 3.01
3667 5207 2.370849 ACACACATCTCCCCGTTTACTT 59.629 45.455 0.00 0.00 0.00 2.24
3688 5228 3.254411 TCATAGACAAACATGGCGCAAAA 59.746 39.130 10.83 0.00 0.00 2.44
3692 5232 3.698029 AATCATAGACAAACATGGCGC 57.302 42.857 0.00 0.00 0.00 6.53
3725 5265 2.482142 CGGAGAGAGTAGATGTTTGCCC 60.482 54.545 0.00 0.00 0.00 5.36
3737 5277 8.532819 AGTCATCTATTTTAAAACGGAGAGAGT 58.467 33.333 1.97 7.09 0.00 3.24
3738 5278 8.934507 AGTCATCTATTTTAAAACGGAGAGAG 57.065 34.615 1.97 4.59 0.00 3.20
3739 5279 8.528643 TGAGTCATCTATTTTAAAACGGAGAGA 58.471 33.333 1.97 2.40 0.00 3.10
3740 5280 8.703604 TGAGTCATCTATTTTAAAACGGAGAG 57.296 34.615 1.97 2.79 0.00 3.20
3741 5281 8.932791 GTTGAGTCATCTATTTTAAAACGGAGA 58.067 33.333 1.97 7.08 0.00 3.71
3742 5282 8.936864 AGTTGAGTCATCTATTTTAAAACGGAG 58.063 33.333 1.97 1.74 0.00 4.63
3743 5283 8.842358 AGTTGAGTCATCTATTTTAAAACGGA 57.158 30.769 1.97 5.09 0.00 4.69
3744 5284 8.717821 TGAGTTGAGTCATCTATTTTAAAACGG 58.282 33.333 1.97 0.00 0.00 4.44
3758 5298 8.954950 ATCGAAAAATAGATGAGTTGAGTCAT 57.045 30.769 1.05 1.05 40.00 3.06
3759 5299 9.869757 TTATCGAAAAATAGATGAGTTGAGTCA 57.130 29.630 0.00 0.00 0.00 3.41
3761 5301 9.099454 GGTTATCGAAAAATAGATGAGTTGAGT 57.901 33.333 0.00 0.00 0.00 3.41
3762 5302 9.319143 AGGTTATCGAAAAATAGATGAGTTGAG 57.681 33.333 0.00 0.00 0.00 3.02
3763 5303 9.098355 CAGGTTATCGAAAAATAGATGAGTTGA 57.902 33.333 0.00 0.00 0.00 3.18
3764 5304 8.338259 CCAGGTTATCGAAAAATAGATGAGTTG 58.662 37.037 0.00 0.00 0.00 3.16
3765 5305 7.012421 GCCAGGTTATCGAAAAATAGATGAGTT 59.988 37.037 0.00 0.00 0.00 3.01
3766 5306 6.483640 GCCAGGTTATCGAAAAATAGATGAGT 59.516 38.462 0.00 0.00 0.00 3.41
3767 5307 6.346919 CGCCAGGTTATCGAAAAATAGATGAG 60.347 42.308 0.00 0.00 0.00 2.90
3768 5308 5.465390 CGCCAGGTTATCGAAAAATAGATGA 59.535 40.000 0.00 0.00 0.00 2.92
3769 5309 5.465390 TCGCCAGGTTATCGAAAAATAGATG 59.535 40.000 0.00 0.00 0.00 2.90
3770 5310 5.607477 TCGCCAGGTTATCGAAAAATAGAT 58.393 37.500 0.00 0.00 0.00 1.98
3771 5311 5.013568 TCGCCAGGTTATCGAAAAATAGA 57.986 39.130 0.00 0.00 0.00 1.98
3772 5312 5.236478 ACATCGCCAGGTTATCGAAAAATAG 59.764 40.000 0.00 0.00 35.77 1.73
3773 5313 5.120399 ACATCGCCAGGTTATCGAAAAATA 58.880 37.500 0.00 0.00 35.77 1.40
3774 5314 3.945285 ACATCGCCAGGTTATCGAAAAAT 59.055 39.130 0.00 0.00 35.77 1.82
3775 5315 3.340034 ACATCGCCAGGTTATCGAAAAA 58.660 40.909 0.00 0.00 35.77 1.94
3776 5316 2.980568 ACATCGCCAGGTTATCGAAAA 58.019 42.857 0.00 0.00 35.77 2.29
3777 5317 2.684001 ACATCGCCAGGTTATCGAAA 57.316 45.000 0.00 0.00 35.77 3.46
3778 5318 2.546778 GAACATCGCCAGGTTATCGAA 58.453 47.619 0.00 0.00 35.77 3.71
3779 5319 1.202486 GGAACATCGCCAGGTTATCGA 60.202 52.381 0.00 0.00 36.63 3.59
3780 5320 1.217882 GGAACATCGCCAGGTTATCG 58.782 55.000 0.00 0.00 0.00 2.92
3781 5321 2.325583 TGGAACATCGCCAGGTTATC 57.674 50.000 0.00 0.00 0.00 1.75
3788 5328 1.003839 GTCCACTGGAACATCGCCA 60.004 57.895 0.00 0.00 38.20 5.69
3789 5329 0.392998 ATGTCCACTGGAACATCGCC 60.393 55.000 0.00 0.00 38.20 5.54
3790 5330 0.729116 CATGTCCACTGGAACATCGC 59.271 55.000 0.00 0.00 38.20 4.58
3791 5331 0.729116 GCATGTCCACTGGAACATCG 59.271 55.000 0.00 3.53 38.20 3.84
3792 5332 2.012673 GAGCATGTCCACTGGAACATC 58.987 52.381 0.00 2.06 38.20 3.06
3793 5333 1.632409 AGAGCATGTCCACTGGAACAT 59.368 47.619 0.00 3.59 38.20 2.71
3794 5334 1.059098 AGAGCATGTCCACTGGAACA 58.941 50.000 0.00 1.22 31.38 3.18
3795 5335 1.446907 CAGAGCATGTCCACTGGAAC 58.553 55.000 0.00 0.00 31.38 3.62
3796 5336 3.942351 CAGAGCATGTCCACTGGAA 57.058 52.632 0.00 0.00 31.38 3.53
3798 5338 4.631773 CCAGAGCATGTCCACTGG 57.368 61.111 12.39 12.39 42.71 4.00
3799 5339 2.104859 CGCCAGAGCATGTCCACTG 61.105 63.158 0.00 0.00 39.83 3.66
3800 5340 2.267006 CGCCAGAGCATGTCCACT 59.733 61.111 0.00 0.00 39.83 4.00
3801 5341 2.821366 CCGCCAGAGCATGTCCAC 60.821 66.667 0.00 0.00 39.83 4.02
3802 5342 3.315142 GACCGCCAGAGCATGTCCA 62.315 63.158 0.00 0.00 39.83 4.02
3803 5343 2.512515 GACCGCCAGAGCATGTCC 60.513 66.667 0.00 0.00 39.83 4.02
3804 5344 1.520342 GAGACCGCCAGAGCATGTC 60.520 63.158 0.00 0.00 39.52 3.06
3805 5345 2.581354 GAGACCGCCAGAGCATGT 59.419 61.111 0.00 0.00 39.83 3.21
3806 5346 2.202987 GGAGACCGCCAGAGCATG 60.203 66.667 0.00 0.00 39.83 4.06
3807 5347 3.842923 CGGAGACCGCCAGAGCAT 61.843 66.667 0.00 0.00 41.17 3.79
3817 5357 2.047179 GCAAGGTGGACGGAGACC 60.047 66.667 0.00 0.00 44.11 3.85
3818 5358 1.079750 GAGCAAGGTGGACGGAGAC 60.080 63.158 0.00 0.00 0.00 3.36
3819 5359 1.533033 TGAGCAAGGTGGACGGAGA 60.533 57.895 0.00 0.00 0.00 3.71
3820 5360 1.374758 GTGAGCAAGGTGGACGGAG 60.375 63.158 0.00 0.00 0.00 4.63
3821 5361 2.741092 GTGAGCAAGGTGGACGGA 59.259 61.111 0.00 0.00 0.00 4.69
3822 5362 1.541310 TAGGTGAGCAAGGTGGACGG 61.541 60.000 0.00 0.00 0.00 4.79
3823 5363 0.320374 TTAGGTGAGCAAGGTGGACG 59.680 55.000 0.00 0.00 0.00 4.79
3824 5364 1.610886 GGTTAGGTGAGCAAGGTGGAC 60.611 57.143 0.00 0.00 0.00 4.02
3825 5365 0.690762 GGTTAGGTGAGCAAGGTGGA 59.309 55.000 0.00 0.00 0.00 4.02
3826 5366 0.400213 TGGTTAGGTGAGCAAGGTGG 59.600 55.000 0.00 0.00 0.00 4.61
3827 5367 1.813513 CTGGTTAGGTGAGCAAGGTG 58.186 55.000 0.00 0.00 0.00 4.00
3828 5368 0.036875 GCTGGTTAGGTGAGCAAGGT 59.963 55.000 0.00 0.00 32.70 3.50
3829 5369 1.021390 CGCTGGTTAGGTGAGCAAGG 61.021 60.000 0.00 0.00 32.70 3.61
3830 5370 0.320771 ACGCTGGTTAGGTGAGCAAG 60.321 55.000 0.00 0.00 32.70 4.01
3831 5371 0.320421 GACGCTGGTTAGGTGAGCAA 60.320 55.000 0.00 0.00 32.70 3.91
3832 5372 1.292223 GACGCTGGTTAGGTGAGCA 59.708 57.895 0.00 0.00 32.70 4.26
3833 5373 1.448013 GGACGCTGGTTAGGTGAGC 60.448 63.158 0.00 0.00 0.00 4.26
3834 5374 1.218316 GGGACGCTGGTTAGGTGAG 59.782 63.158 0.00 0.00 0.00 3.51
3835 5375 0.834687 AAGGGACGCTGGTTAGGTGA 60.835 55.000 0.00 0.00 0.00 4.02
3836 5376 0.899720 TAAGGGACGCTGGTTAGGTG 59.100 55.000 0.00 0.00 0.00 4.00
3837 5377 0.900421 GTAAGGGACGCTGGTTAGGT 59.100 55.000 0.00 0.00 0.00 3.08
3838 5378 0.899720 TGTAAGGGACGCTGGTTAGG 59.100 55.000 0.00 0.00 0.00 2.69
3839 5379 2.232941 TCTTGTAAGGGACGCTGGTTAG 59.767 50.000 0.00 0.00 0.00 2.34
3840 5380 2.028748 GTCTTGTAAGGGACGCTGGTTA 60.029 50.000 0.00 0.00 0.00 2.85
3841 5381 1.053424 TCTTGTAAGGGACGCTGGTT 58.947 50.000 0.00 0.00 0.00 3.67
3842 5382 0.320697 GTCTTGTAAGGGACGCTGGT 59.679 55.000 0.00 0.00 0.00 4.00
3843 5383 0.736325 CGTCTTGTAAGGGACGCTGG 60.736 60.000 2.72 0.00 46.23 4.85
3844 5384 2.738147 CGTCTTGTAAGGGACGCTG 58.262 57.895 2.72 0.00 46.23 5.18
3848 5388 2.030451 ACTTCGACGTCTTGTAAGGGAC 60.030 50.000 14.70 0.00 0.00 4.46
3849 5389 2.030540 CACTTCGACGTCTTGTAAGGGA 60.031 50.000 14.70 0.00 0.00 4.20
3850 5390 2.325761 CACTTCGACGTCTTGTAAGGG 58.674 52.381 14.70 9.03 0.00 3.95
3851 5391 2.030540 TCCACTTCGACGTCTTGTAAGG 60.031 50.000 14.70 8.54 0.00 2.69
3852 5392 3.278367 TCCACTTCGACGTCTTGTAAG 57.722 47.619 14.70 13.29 0.00 2.34
3853 5393 3.635331 CTTCCACTTCGACGTCTTGTAA 58.365 45.455 14.70 1.95 0.00 2.41
3854 5394 2.606308 GCTTCCACTTCGACGTCTTGTA 60.606 50.000 14.70 0.00 0.00 2.41
3855 5395 1.868519 GCTTCCACTTCGACGTCTTGT 60.869 52.381 14.70 6.57 0.00 3.16
3856 5396 0.784778 GCTTCCACTTCGACGTCTTG 59.215 55.000 14.70 5.91 0.00 3.02
3857 5397 0.674534 AGCTTCCACTTCGACGTCTT 59.325 50.000 14.70 0.00 0.00 3.01
3858 5398 0.039074 CAGCTTCCACTTCGACGTCT 60.039 55.000 14.70 0.00 0.00 4.18
3859 5399 1.009389 CCAGCTTCCACTTCGACGTC 61.009 60.000 5.18 5.18 0.00 4.34
3860 5400 1.006102 CCAGCTTCCACTTCGACGT 60.006 57.895 0.00 0.00 0.00 4.34
3861 5401 1.738099 CCCAGCTTCCACTTCGACG 60.738 63.158 0.00 0.00 0.00 5.12
3862 5402 0.670854 GTCCCAGCTTCCACTTCGAC 60.671 60.000 0.00 0.00 0.00 4.20
3863 5403 0.832135 AGTCCCAGCTTCCACTTCGA 60.832 55.000 0.00 0.00 0.00 3.71
3864 5404 0.671781 CAGTCCCAGCTTCCACTTCG 60.672 60.000 0.00 0.00 0.00 3.79
3865 5405 0.957888 GCAGTCCCAGCTTCCACTTC 60.958 60.000 0.00 0.00 0.00 3.01
3866 5406 1.073897 GCAGTCCCAGCTTCCACTT 59.926 57.895 0.00 0.00 0.00 3.16
3867 5407 1.495579 ATGCAGTCCCAGCTTCCACT 61.496 55.000 0.00 0.00 0.00 4.00
3868 5408 1.001641 ATGCAGTCCCAGCTTCCAC 60.002 57.895 0.00 0.00 0.00 4.02
3869 5409 1.300963 GATGCAGTCCCAGCTTCCA 59.699 57.895 0.00 0.00 31.99 3.53
3870 5410 1.028868 GTGATGCAGTCCCAGCTTCC 61.029 60.000 0.00 0.00 35.87 3.46
3871 5411 1.028868 GGTGATGCAGTCCCAGCTTC 61.029 60.000 0.00 0.00 36.88 3.86
3872 5412 1.001641 GGTGATGCAGTCCCAGCTT 60.002 57.895 0.00 0.00 0.00 3.74
3873 5413 2.673523 GGTGATGCAGTCCCAGCT 59.326 61.111 0.00 0.00 0.00 4.24
3874 5414 2.439156 GGGTGATGCAGTCCCAGC 60.439 66.667 15.80 9.42 40.79 4.85
3875 5415 2.124983 CGGGTGATGCAGTCCCAG 60.125 66.667 19.14 10.78 41.12 4.45
3876 5416 2.927856 ACGGGTGATGCAGTCCCA 60.928 61.111 19.14 1.51 41.12 4.37
3877 5417 2.436646 CACGGGTGATGCAGTCCC 60.437 66.667 12.03 12.03 37.98 4.46
3878 5418 3.127533 GCACGGGTGATGCAGTCC 61.128 66.667 2.38 0.00 42.88 3.85
3883 5423 2.568090 CCTTTGCACGGGTGATGC 59.432 61.111 2.38 0.00 43.68 3.91
3884 5424 1.303236 TCCCTTTGCACGGGTGATG 60.303 57.895 17.54 0.00 42.56 3.07
3885 5425 1.002134 CTCCCTTTGCACGGGTGAT 60.002 57.895 17.54 0.00 42.56 3.06
3886 5426 1.701031 TTCTCCCTTTGCACGGGTGA 61.701 55.000 17.54 17.24 42.56 4.02
3887 5427 1.228124 TTCTCCCTTTGCACGGGTG 60.228 57.895 17.54 15.50 42.56 4.61
3888 5428 1.073199 CTTCTCCCTTTGCACGGGT 59.927 57.895 17.54 0.00 42.56 5.28
3889 5429 2.335712 GCTTCTCCCTTTGCACGGG 61.336 63.158 13.09 13.09 43.38 5.28
3890 5430 1.600636 TGCTTCTCCCTTTGCACGG 60.601 57.895 0.00 0.00 0.00 4.94
3891 5431 1.576421 GTGCTTCTCCCTTTGCACG 59.424 57.895 0.00 0.00 44.60 5.34
3893 5433 1.600636 CGGTGCTTCTCCCTTTGCA 60.601 57.895 0.00 0.00 0.00 4.08
3894 5434 1.301677 CTCGGTGCTTCTCCCTTTGC 61.302 60.000 0.00 0.00 0.00 3.68
3895 5435 0.035458 ACTCGGTGCTTCTCCCTTTG 59.965 55.000 0.00 0.00 0.00 2.77
3896 5436 0.765510 AACTCGGTGCTTCTCCCTTT 59.234 50.000 0.00 0.00 0.00 3.11
3897 5437 0.765510 AAACTCGGTGCTTCTCCCTT 59.234 50.000 0.00 0.00 0.00 3.95
3898 5438 1.640917 TAAACTCGGTGCTTCTCCCT 58.359 50.000 0.00 0.00 0.00 4.20
3899 5439 2.289506 ACTTAAACTCGGTGCTTCTCCC 60.290 50.000 0.00 0.00 0.00 4.30
3900 5440 2.994578 GACTTAAACTCGGTGCTTCTCC 59.005 50.000 0.00 0.00 0.00 3.71
3901 5441 2.994578 GGACTTAAACTCGGTGCTTCTC 59.005 50.000 0.00 0.00 0.00 2.87
3902 5442 2.609737 CGGACTTAAACTCGGTGCTTCT 60.610 50.000 0.00 0.00 0.00 2.85
3903 5443 1.725164 CGGACTTAAACTCGGTGCTTC 59.275 52.381 0.00 0.00 0.00 3.86
3904 5444 1.342174 TCGGACTTAAACTCGGTGCTT 59.658 47.619 0.00 0.00 0.00 3.91
3905 5445 0.963962 TCGGACTTAAACTCGGTGCT 59.036 50.000 0.00 0.00 0.00 4.40
3906 5446 1.458445 GTTCGGACTTAAACTCGGTGC 59.542 52.381 0.00 0.00 0.00 5.01
3907 5447 2.746269 TGTTCGGACTTAAACTCGGTG 58.254 47.619 0.00 0.00 0.00 4.94
3908 5448 3.457610 TTGTTCGGACTTAAACTCGGT 57.542 42.857 0.00 0.00 0.00 4.69
3909 5449 4.799419 TTTTGTTCGGACTTAAACTCGG 57.201 40.909 0.00 0.00 0.00 4.63
3910 5450 4.663091 CGTTTTTGTTCGGACTTAAACTCG 59.337 41.667 16.82 10.88 32.53 4.18
3921 5461 1.719766 CGCGTCCGTTTTTGTTCGG 60.720 57.895 0.00 0.00 46.93 4.30
3922 5462 1.719766 CCGCGTCCGTTTTTGTTCG 60.720 57.895 4.92 0.00 0.00 3.95
3923 5463 0.236449 ATCCGCGTCCGTTTTTGTTC 59.764 50.000 4.92 0.00 0.00 3.18
3924 5464 0.664224 AATCCGCGTCCGTTTTTGTT 59.336 45.000 4.92 0.00 0.00 2.83
3925 5465 0.664224 AAATCCGCGTCCGTTTTTGT 59.336 45.000 4.92 0.00 0.00 2.83
3926 5466 1.761206 AAAATCCGCGTCCGTTTTTG 58.239 45.000 4.92 0.00 31.20 2.44
3927 5467 2.121009 CAAAAATCCGCGTCCGTTTTT 58.879 42.857 4.92 9.73 34.81 1.94
3928 5468 1.334243 TCAAAAATCCGCGTCCGTTTT 59.666 42.857 4.92 3.33 0.00 2.43
3929 5469 0.945813 TCAAAAATCCGCGTCCGTTT 59.054 45.000 4.92 0.00 0.00 3.60
3930 5470 0.515564 CTCAAAAATCCGCGTCCGTT 59.484 50.000 4.92 0.00 0.00 4.44
3931 5471 0.320073 TCTCAAAAATCCGCGTCCGT 60.320 50.000 4.92 0.00 0.00 4.69
3948 5488 3.939837 CTCGCGTGGCACCATGTCT 62.940 63.158 12.86 0.00 35.52 3.41
4044 5584 5.292589 CACGTATTTGCCGAATTAACCTACT 59.707 40.000 0.00 0.00 0.00 2.57
4162 5704 8.997323 CATCTTAAATGGTCTCATCAAGATACC 58.003 37.037 12.02 0.00 42.33 2.73
4355 6504 2.234908 ACTTCGGTGATCTAAGCAGCTT 59.765 45.455 13.46 13.46 0.00 3.74
4371 6520 5.629097 AGTGTCTCGTTAGTATTCACTTCG 58.371 41.667 0.00 0.00 36.14 3.79
4456 6605 0.909610 ATGAAGAGGGACGCAAGGGA 60.910 55.000 0.00 0.00 46.39 4.20
4472 6621 2.710902 CCGAGTCGCCACCTCATGA 61.711 63.158 7.12 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.