Multiple sequence alignment - TraesCS2B01G104000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G104000 chr2B 100.000 3654 0 0 1 3654 64855092 64858745 0.000000e+00 6748.0
1 TraesCS2B01G104000 chr2B 92.020 1604 93 20 883 2472 64778734 64777152 0.000000e+00 2220.0
2 TraesCS2B01G104000 chr2B 93.195 529 33 3 2529 3056 64777171 64776645 0.000000e+00 774.0
3 TraesCS2B01G104000 chr2B 87.976 657 73 3 1811 2461 770766834 770766178 0.000000e+00 771.0
4 TraesCS2B01G104000 chr2B 85.481 675 87 6 1000 1667 770767515 770766845 0.000000e+00 693.0
5 TraesCS2B01G104000 chr2B 89.028 319 33 2 2529 2846 770766095 770765778 9.510000e-106 394.0
6 TraesCS2B01G104000 chr2B 94.444 180 9 1 3085 3264 556659028 556659206 3.590000e-70 276.0
7 TraesCS2B01G104000 chr2B 87.283 173 16 3 2921 3093 64773140 64772974 3.720000e-45 193.0
8 TraesCS2B01G104000 chr2B 91.579 95 5 1 3414 3505 682234379 682234285 1.070000e-25 128.0
9 TraesCS2B01G104000 chr2B 72.638 307 65 16 264 560 512369277 512369574 2.340000e-12 84.2
10 TraesCS2B01G104000 chr2D 94.841 3121 115 29 1 3090 37207055 37210160 0.000000e+00 4830.0
11 TraesCS2B01G104000 chr2D 93.474 1609 74 18 883 2472 37074615 37073019 0.000000e+00 2361.0
12 TraesCS2B01G104000 chr2D 92.193 1614 77 22 883 2472 37055986 37054398 0.000000e+00 2237.0
13 TraesCS2B01G104000 chr2D 92.995 571 35 5 2529 3095 37073038 37072469 0.000000e+00 828.0
14 TraesCS2B01G104000 chr2D 92.566 565 37 4 2529 3090 37054417 37053855 0.000000e+00 806.0
15 TraesCS2B01G104000 chr2D 90.816 98 4 4 3413 3505 37224396 37224299 3.830000e-25 126.0
16 TraesCS2B01G104000 chr2A 94.213 2713 99 30 392 3070 41991956 41994644 0.000000e+00 4087.0
17 TraesCS2B01G104000 chr2A 92.841 1313 67 12 1796 3090 41756841 41755538 0.000000e+00 1879.0
18 TraesCS2B01G104000 chr2A 91.879 628 46 4 883 1508 41760514 41759890 0.000000e+00 872.0
19 TraesCS2B01G104000 chr2A 82.879 917 137 12 1811 2715 758469821 758468913 0.000000e+00 806.0
20 TraesCS2B01G104000 chr2A 84.889 675 91 6 1000 1667 758449707 758449037 0.000000e+00 671.0
21 TraesCS2B01G104000 chr2A 94.293 403 23 0 2610 3012 41745320 41744918 5.180000e-173 617.0
22 TraesCS2B01G104000 chr2A 97.059 170 5 0 3089 3258 632622110 632622279 1.660000e-73 287.0
23 TraesCS2B01G104000 chr2A 89.899 198 17 3 1 197 41980194 41980389 6.060000e-63 252.0
24 TraesCS2B01G104000 chr2A 88.889 162 14 3 197 357 41991582 41991740 2.880000e-46 196.0
25 TraesCS2B01G104000 chr2A 91.971 137 9 2 2837 2973 41745877 41745743 1.340000e-44 191.0
26 TraesCS2B01G104000 chr2A 91.667 96 5 1 3413 3505 176559616 176559711 2.960000e-26 130.0
27 TraesCS2B01G104000 chr2A 82.857 70 9 3 3020 3086 41745735 41745666 3.940000e-05 60.2
28 TraesCS2B01G104000 chrUn 89.088 669 66 4 1811 2472 17299182 17298514 0.000000e+00 824.0
29 TraesCS2B01G104000 chrUn 85.567 679 90 7 1000 1671 17299866 17299189 0.000000e+00 704.0
30 TraesCS2B01G104000 chrUn 89.937 318 30 2 2529 2845 17298533 17298217 3.400000e-110 409.0
31 TraesCS2B01G104000 chr1B 98.802 167 2 0 3089 3255 670883556 670883722 7.670000e-77 298.0
32 TraesCS2B01G104000 chr1B 94.382 178 9 1 3091 3268 10382879 10382703 4.650000e-69 272.0
33 TraesCS2B01G104000 chr6B 98.773 163 2 0 3095 3257 179656071 179655909 1.280000e-74 291.0
34 TraesCS2B01G104000 chr7A 97.633 169 3 1 3088 3255 157397806 157397974 4.620000e-74 289.0
35 TraesCS2B01G104000 chr7A 100.000 30 0 0 1 30 220539922 220539951 5.100000e-04 56.5
36 TraesCS2B01G104000 chr3B 97.605 167 4 0 3092 3258 525060159 525060325 1.660000e-73 287.0
37 TraesCS2B01G104000 chr3B 100.000 30 0 0 1 30 603631903 603631874 5.100000e-04 56.5
38 TraesCS2B01G104000 chr6A 96.023 176 5 2 3085 3259 12047376 12047550 5.970000e-73 285.0
39 TraesCS2B01G104000 chr6A 100.000 30 0 0 1 30 224158902 224158873 5.100000e-04 56.5
40 TraesCS2B01G104000 chr5B 94.475 181 9 1 3080 3259 64265986 64265806 9.990000e-71 278.0
41 TraesCS2B01G104000 chr5B 100.000 30 0 0 1 30 148496466 148496495 5.100000e-04 56.5
42 TraesCS2B01G104000 chr4B 95.238 147 7 0 3508 3654 177857054 177857200 2.190000e-57 233.0
43 TraesCS2B01G104000 chr4B 90.722 97 6 1 3412 3505 177856820 177856916 3.830000e-25 126.0
44 TraesCS2B01G104000 chr7D 92.708 96 4 2 3413 3505 113888868 113888773 6.360000e-28 135.0
45 TraesCS2B01G104000 chr7D 89.796 98 6 2 3412 3505 63488641 63488738 4.960000e-24 122.0
46 TraesCS2B01G104000 chr1D 91.579 95 4 2 3415 3505 52734776 52734682 1.070000e-25 128.0
47 TraesCS2B01G104000 chr5D 90.625 96 5 2 3414 3505 100858981 100858886 1.380000e-24 124.0
48 TraesCS2B01G104000 chr5D 90.000 100 4 4 3412 3505 205591800 205591899 1.380000e-24 124.0
49 TraesCS2B01G104000 chr5D 94.737 57 3 0 7 63 463971346 463971402 5.030000e-14 89.8
50 TraesCS2B01G104000 chr3A 74.790 238 39 13 363 593 525114885 525114662 1.810000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G104000 chr2B 64855092 64858745 3653 False 6748.000000 6748 100.000000 1 3654 1 chr2B.!!$F1 3653
1 TraesCS2B01G104000 chr2B 64772974 64778734 5760 True 1062.333333 2220 90.832667 883 3093 3 chr2B.!!$R2 2210
2 TraesCS2B01G104000 chr2B 770765778 770767515 1737 True 619.333333 771 87.495000 1000 2846 3 chr2B.!!$R3 1846
3 TraesCS2B01G104000 chr2D 37207055 37210160 3105 False 4830.000000 4830 94.841000 1 3090 1 chr2D.!!$F1 3089
4 TraesCS2B01G104000 chr2D 37072469 37074615 2146 True 1594.500000 2361 93.234500 883 3095 2 chr2D.!!$R3 2212
5 TraesCS2B01G104000 chr2D 37053855 37055986 2131 True 1521.500000 2237 92.379500 883 3090 2 chr2D.!!$R2 2207
6 TraesCS2B01G104000 chr2A 41991582 41994644 3062 False 2141.500000 4087 91.551000 197 3070 2 chr2A.!!$F4 2873
7 TraesCS2B01G104000 chr2A 41755538 41760514 4976 True 1375.500000 1879 92.360000 883 3090 2 chr2A.!!$R4 2207
8 TraesCS2B01G104000 chr2A 758468913 758469821 908 True 806.000000 806 82.879000 1811 2715 1 chr2A.!!$R2 904
9 TraesCS2B01G104000 chr2A 758449037 758449707 670 True 671.000000 671 84.889000 1000 1667 1 chr2A.!!$R1 667
10 TraesCS2B01G104000 chr2A 41744918 41745877 959 True 289.400000 617 89.707000 2610 3086 3 chr2A.!!$R3 476
11 TraesCS2B01G104000 chrUn 17298217 17299866 1649 True 645.666667 824 88.197333 1000 2845 3 chrUn.!!$R1 1845

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
935 1149 0.106419 ACCAACACGGGTCAAACCAT 60.106 50.0 0.0 0.0 41.02 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2889 6072 0.036022 AGCACAGGCAGTCCTTCTTC 59.964 55.0 0.0 0.0 41.93 2.87 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 9.277783 GATATATACAGGATAACATTGGATGGC 57.722 37.037 0.00 0.00 33.60 4.40
77 78 4.615815 GGCCGCCTCTCGCATCAT 62.616 66.667 0.71 0.00 37.30 2.45
117 119 3.833645 CCGAGGACGAATGCCGGA 61.834 66.667 5.05 0.00 42.49 5.14
150 152 1.001406 GTCAGTGTTGGAGACTCCCTG 59.999 57.143 19.11 17.12 35.03 4.45
154 156 3.131933 CAGTGTTGGAGACTCCCTGATAG 59.868 52.174 19.11 1.64 35.03 2.08
169 171 7.127955 ACTCCCTGATAGAATAAAATGACCAGT 59.872 37.037 0.00 0.00 0.00 4.00
316 320 2.539547 GCACGCGCATATCTTCACATTT 60.540 45.455 5.73 0.00 38.36 2.32
343 347 1.134818 TGTGCAGATAGTTTCGCGGAT 60.135 47.619 6.13 0.00 0.00 4.18
373 377 1.946745 TTTCGGGCCTTTGCAAAAAG 58.053 45.000 13.84 8.81 40.13 2.27
471 658 9.739786 GATAATTTTTCATAAAACTTTGTGCCG 57.260 29.630 0.00 0.00 36.15 5.69
510 701 3.490526 GGAGTTGTACGCGTGTTTTTCTA 59.509 43.478 24.59 0.00 0.00 2.10
551 742 7.452630 AAAACGCGTTTAAAATGCTTTAGAA 57.547 28.000 34.89 0.00 41.25 2.10
593 784 0.109689 GTTCAGGACGTCCTCACTCG 60.110 60.000 34.28 22.05 46.65 4.18
633 833 6.619801 AGGAAACTTGTTGCTACTACTTTG 57.380 37.500 0.00 0.00 37.44 2.77
636 836 6.037830 GGAAACTTGTTGCTACTACTTTGTGA 59.962 38.462 0.00 0.00 0.00 3.58
640 840 6.821665 ACTTGTTGCTACTACTTTGTGAGAAA 59.178 34.615 0.00 0.00 0.00 2.52
650 850 8.794335 ACTACTTTGTGAGAAAAAGAAGAAGT 57.206 30.769 3.09 0.00 37.91 3.01
699 907 5.052370 GCGTAAGAAAAACTTTGTCTTGCTG 60.052 40.000 14.89 11.26 39.72 4.41
735 943 3.321682 CCCTCCGTATTAACACCCGATTA 59.678 47.826 0.00 0.00 0.00 1.75
736 944 4.202243 CCCTCCGTATTAACACCCGATTAA 60.202 45.833 0.00 0.00 0.00 1.40
737 945 5.358922 CCTCCGTATTAACACCCGATTAAA 58.641 41.667 0.00 0.00 0.00 1.52
738 946 5.816777 CCTCCGTATTAACACCCGATTAAAA 59.183 40.000 0.00 0.00 0.00 1.52
739 947 6.484308 CCTCCGTATTAACACCCGATTAAAAT 59.516 38.462 0.00 0.00 0.00 1.82
843 1057 1.665679 CGACATAGCAGGCGACAAAAT 59.334 47.619 0.00 0.00 0.00 1.82
935 1149 0.106419 ACCAACACGGGTCAAACCAT 60.106 50.000 0.00 0.00 41.02 3.55
1539 4578 3.379445 AACCTCGACGACGCCCAT 61.379 61.111 1.48 0.00 39.58 4.00
2480 5543 5.984926 GGGTACGTATTCCGATCAATTAACA 59.015 40.000 0.00 0.00 40.70 2.41
2482 5545 7.148689 GGGTACGTATTCCGATCAATTAACATC 60.149 40.741 0.00 0.00 40.70 3.06
2483 5546 7.597743 GGTACGTATTCCGATCAATTAACATCT 59.402 37.037 0.00 0.00 40.70 2.90
2484 5547 8.975439 GTACGTATTCCGATCAATTAACATCTT 58.025 33.333 0.00 0.00 40.70 2.40
2485 5548 7.851508 ACGTATTCCGATCAATTAACATCTTG 58.148 34.615 0.00 0.00 40.70 3.02
2486 5549 6.792250 CGTATTCCGATCAATTAACATCTTGC 59.208 38.462 0.00 0.00 39.56 4.01
2487 5550 4.794248 TCCGATCAATTAACATCTTGCG 57.206 40.909 0.00 0.00 0.00 4.85
2489 5552 3.312421 CCGATCAATTAACATCTTGCGGT 59.688 43.478 0.00 0.00 0.00 5.68
2721 5904 3.007940 TCATCTTCCTCATCAACAACGGT 59.992 43.478 0.00 0.00 0.00 4.83
2889 6072 4.838486 GCGACAGCGACCGAGGAG 62.838 72.222 0.00 0.00 40.82 3.69
2973 6156 1.995626 CGAGTGGGGATCCAGGGTT 60.996 63.158 15.23 0.00 45.05 4.11
2988 6171 2.668550 GTTTCCGCCGCCAACTCT 60.669 61.111 0.00 0.00 0.00 3.24
3013 6199 1.198759 ACCCAACCCGCAGTAGACAT 61.199 55.000 0.00 0.00 0.00 3.06
3014 6200 0.035439 CCCAACCCGCAGTAGACATT 60.035 55.000 0.00 0.00 0.00 2.71
3018 9840 4.056050 CCAACCCGCAGTAGACATTATAC 58.944 47.826 0.00 0.00 0.00 1.47
3072 9903 7.227512 AGGCATTTTCGATTTACTAGAATCCAG 59.772 37.037 0.00 0.00 33.45 3.86
3090 9921 4.414852 TCCAGCGTACGTTTGATTACTAC 58.585 43.478 17.90 0.00 0.00 2.73
3091 9922 4.156556 TCCAGCGTACGTTTGATTACTACT 59.843 41.667 17.90 0.00 0.00 2.57
3092 9923 5.353956 TCCAGCGTACGTTTGATTACTACTA 59.646 40.000 17.90 0.00 0.00 1.82
3093 9924 5.453587 CCAGCGTACGTTTGATTACTACTAC 59.546 44.000 17.90 0.00 0.00 2.73
3094 9925 6.253746 CAGCGTACGTTTGATTACTACTACT 58.746 40.000 17.90 0.00 0.00 2.57
3095 9926 6.410337 CAGCGTACGTTTGATTACTACTACTC 59.590 42.308 17.90 0.00 0.00 2.59
3096 9927 5.678919 GCGTACGTTTGATTACTACTACTCC 59.321 44.000 17.90 0.00 0.00 3.85
3097 9928 6.195165 CGTACGTTTGATTACTACTACTCCC 58.805 44.000 7.22 0.00 0.00 4.30
3098 9929 6.037610 CGTACGTTTGATTACTACTACTCCCT 59.962 42.308 7.22 0.00 0.00 4.20
3099 9930 6.448207 ACGTTTGATTACTACTACTCCCTC 57.552 41.667 0.00 0.00 0.00 4.30
3100 9931 5.359292 ACGTTTGATTACTACTACTCCCTCC 59.641 44.000 0.00 0.00 0.00 4.30
3101 9932 5.505324 CGTTTGATTACTACTACTCCCTCCG 60.505 48.000 0.00 0.00 0.00 4.63
3102 9933 4.785346 TGATTACTACTACTCCCTCCGT 57.215 45.455 0.00 0.00 0.00 4.69
3103 9934 5.121380 TGATTACTACTACTCCCTCCGTT 57.879 43.478 0.00 0.00 0.00 4.44
3104 9935 5.128919 TGATTACTACTACTCCCTCCGTTC 58.871 45.833 0.00 0.00 0.00 3.95
3105 9936 2.433662 ACTACTACTCCCTCCGTTCC 57.566 55.000 0.00 0.00 0.00 3.62
3106 9937 1.637553 ACTACTACTCCCTCCGTTCCA 59.362 52.381 0.00 0.00 0.00 3.53
3107 9938 2.042162 ACTACTACTCCCTCCGTTCCAA 59.958 50.000 0.00 0.00 0.00 3.53
3108 9939 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
3109 9940 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
3110 9941 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
3111 9942 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
3112 9943 3.345508 ACTCCCTCCGTTCCAAAATAC 57.654 47.619 0.00 0.00 0.00 1.89
3113 9944 2.910977 ACTCCCTCCGTTCCAAAATACT 59.089 45.455 0.00 0.00 0.00 2.12
3114 9945 3.329814 ACTCCCTCCGTTCCAAAATACTT 59.670 43.478 0.00 0.00 0.00 2.24
3115 9946 3.681593 TCCCTCCGTTCCAAAATACTTG 58.318 45.455 0.00 0.00 0.00 3.16
3116 9947 3.073356 TCCCTCCGTTCCAAAATACTTGT 59.927 43.478 0.00 0.00 0.00 3.16
3117 9948 3.439129 CCCTCCGTTCCAAAATACTTGTC 59.561 47.826 0.00 0.00 0.00 3.18
3118 9949 4.324267 CCTCCGTTCCAAAATACTTGTCT 58.676 43.478 0.00 0.00 0.00 3.41
3119 9950 4.760204 CCTCCGTTCCAAAATACTTGTCTT 59.240 41.667 0.00 0.00 0.00 3.01
3120 9951 5.240844 CCTCCGTTCCAAAATACTTGTCTTT 59.759 40.000 0.00 0.00 0.00 2.52
3121 9952 6.308371 TCCGTTCCAAAATACTTGTCTTTC 57.692 37.500 0.00 0.00 0.00 2.62
3122 9953 6.059484 TCCGTTCCAAAATACTTGTCTTTCT 58.941 36.000 0.00 0.00 0.00 2.52
3123 9954 7.218614 TCCGTTCCAAAATACTTGTCTTTCTA 58.781 34.615 0.00 0.00 0.00 2.10
3124 9955 7.386848 TCCGTTCCAAAATACTTGTCTTTCTAG 59.613 37.037 0.00 0.00 0.00 2.43
3125 9956 7.360946 CCGTTCCAAAATACTTGTCTTTCTAGG 60.361 40.741 0.00 0.00 0.00 3.02
3126 9957 7.306213 GTTCCAAAATACTTGTCTTTCTAGGC 58.694 38.462 0.00 0.00 0.00 3.93
3127 9958 6.539173 TCCAAAATACTTGTCTTTCTAGGCA 58.461 36.000 0.00 0.00 33.22 4.75
3128 9959 7.175104 TCCAAAATACTTGTCTTTCTAGGCAT 58.825 34.615 0.00 0.00 35.56 4.40
3129 9960 7.669722 TCCAAAATACTTGTCTTTCTAGGCATT 59.330 33.333 0.00 0.00 35.56 3.56
3130 9961 8.306761 CCAAAATACTTGTCTTTCTAGGCATTT 58.693 33.333 0.00 0.00 35.56 2.32
3131 9962 9.346725 CAAAATACTTGTCTTTCTAGGCATTTC 57.653 33.333 0.00 0.00 35.56 2.17
3132 9963 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
3133 9964 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
3134 9965 6.959639 ACTTGTCTTTCTAGGCATTTCAAA 57.040 33.333 0.00 0.00 35.56 2.69
3135 9966 7.530426 ACTTGTCTTTCTAGGCATTTCAAAT 57.470 32.000 0.00 0.00 35.56 2.32
3136 9967 7.373493 ACTTGTCTTTCTAGGCATTTCAAATG 58.627 34.615 5.68 5.68 35.56 2.32
3137 9968 6.271488 TGTCTTTCTAGGCATTTCAAATGG 57.729 37.500 12.14 0.00 29.10 3.16
3138 9969 6.009589 TGTCTTTCTAGGCATTTCAAATGGA 58.990 36.000 12.14 0.00 29.10 3.41
3139 9970 6.071952 TGTCTTTCTAGGCATTTCAAATGGAC 60.072 38.462 12.14 8.23 29.10 4.02
3140 9971 6.151817 GTCTTTCTAGGCATTTCAAATGGACT 59.848 38.462 12.14 3.08 0.00 3.85
3141 9972 6.375455 TCTTTCTAGGCATTTCAAATGGACTC 59.625 38.462 12.14 0.00 0.00 3.36
3142 9973 5.178096 TCTAGGCATTTCAAATGGACTCA 57.822 39.130 12.14 0.00 0.00 3.41
3143 9974 5.569355 TCTAGGCATTTCAAATGGACTCAA 58.431 37.500 12.14 0.00 0.00 3.02
3144 9975 4.525912 AGGCATTTCAAATGGACTCAAC 57.474 40.909 12.14 0.00 0.00 3.18
3145 9976 3.896888 AGGCATTTCAAATGGACTCAACA 59.103 39.130 12.14 0.00 0.00 3.33
3146 9977 4.529377 AGGCATTTCAAATGGACTCAACAT 59.471 37.500 12.14 0.00 0.00 2.71
3147 9978 5.716228 AGGCATTTCAAATGGACTCAACATA 59.284 36.000 12.14 0.00 0.00 2.29
3148 9979 5.807011 GGCATTTCAAATGGACTCAACATAC 59.193 40.000 12.14 0.00 0.00 2.39
3149 9980 5.512788 GCATTTCAAATGGACTCAACATACG 59.487 40.000 12.14 0.00 0.00 3.06
3150 9981 5.621197 TTTCAAATGGACTCAACATACGG 57.379 39.130 0.00 0.00 0.00 4.02
3151 9982 4.545208 TCAAATGGACTCAACATACGGA 57.455 40.909 0.00 0.00 0.00 4.69
3152 9983 4.250464 TCAAATGGACTCAACATACGGAC 58.750 43.478 0.00 0.00 0.00 4.79
3153 9984 2.579207 ATGGACTCAACATACGGACG 57.421 50.000 0.00 0.00 0.00 4.79
3154 9985 1.250328 TGGACTCAACATACGGACGT 58.750 50.000 1.98 1.98 0.00 4.34
3155 9986 2.435422 TGGACTCAACATACGGACGTA 58.565 47.619 7.05 7.05 34.87 3.57
3156 9987 3.018856 TGGACTCAACATACGGACGTAT 58.981 45.455 11.25 11.25 41.49 3.06
3173 10004 9.241317 ACGGACGTATGTAGACATATTTTAAAG 57.759 33.333 5.69 0.00 40.53 1.85
3174 10005 9.241317 CGGACGTATGTAGACATATTTTAAAGT 57.759 33.333 5.69 0.00 40.53 2.66
3195 10026 8.579682 AAAGTTTAGATTCACTCATTTTGTGC 57.420 30.769 0.00 0.00 35.58 4.57
3196 10027 6.681777 AGTTTAGATTCACTCATTTTGTGCC 58.318 36.000 0.00 0.00 35.58 5.01
3197 10028 3.837213 AGATTCACTCATTTTGTGCCG 57.163 42.857 0.00 0.00 35.58 5.69
3198 10029 3.149196 AGATTCACTCATTTTGTGCCGT 58.851 40.909 0.00 0.00 35.58 5.68
3199 10030 4.323417 AGATTCACTCATTTTGTGCCGTA 58.677 39.130 0.00 0.00 35.58 4.02
3200 10031 4.943705 AGATTCACTCATTTTGTGCCGTAT 59.056 37.500 0.00 0.00 35.58 3.06
3201 10032 4.418013 TTCACTCATTTTGTGCCGTATG 57.582 40.909 0.00 0.00 35.58 2.39
3202 10033 3.407698 TCACTCATTTTGTGCCGTATGT 58.592 40.909 0.00 0.00 35.58 2.29
3203 10034 4.570930 TCACTCATTTTGTGCCGTATGTA 58.429 39.130 0.00 0.00 35.58 2.29
3204 10035 4.629634 TCACTCATTTTGTGCCGTATGTAG 59.370 41.667 0.00 0.00 35.58 2.74
3205 10036 4.391830 CACTCATTTTGTGCCGTATGTAGT 59.608 41.667 0.00 0.00 0.00 2.73
3206 10037 5.001232 ACTCATTTTGTGCCGTATGTAGTT 58.999 37.500 0.00 0.00 0.00 2.24
3207 10038 6.091577 CACTCATTTTGTGCCGTATGTAGTTA 59.908 38.462 0.00 0.00 0.00 2.24
3208 10039 6.091713 ACTCATTTTGTGCCGTATGTAGTTAC 59.908 38.462 0.00 0.00 0.00 2.50
3209 10040 6.167685 TCATTTTGTGCCGTATGTAGTTACT 58.832 36.000 0.00 0.00 0.00 2.24
3210 10041 6.651643 TCATTTTGTGCCGTATGTAGTTACTT 59.348 34.615 0.00 0.00 0.00 2.24
3211 10042 5.849357 TTTGTGCCGTATGTAGTTACTTG 57.151 39.130 0.00 0.00 0.00 3.16
3212 10043 4.524316 TGTGCCGTATGTAGTTACTTGT 57.476 40.909 0.00 0.00 0.00 3.16
3213 10044 4.885413 TGTGCCGTATGTAGTTACTTGTT 58.115 39.130 0.00 0.00 0.00 2.83
3214 10045 4.687018 TGTGCCGTATGTAGTTACTTGTTG 59.313 41.667 0.00 0.00 0.00 3.33
3215 10046 4.925054 GTGCCGTATGTAGTTACTTGTTGA 59.075 41.667 0.00 0.00 0.00 3.18
3216 10047 5.406175 GTGCCGTATGTAGTTACTTGTTGAA 59.594 40.000 0.00 0.00 0.00 2.69
3217 10048 5.990386 TGCCGTATGTAGTTACTTGTTGAAA 59.010 36.000 0.00 0.00 0.00 2.69
3218 10049 6.651643 TGCCGTATGTAGTTACTTGTTGAAAT 59.348 34.615 0.00 0.00 0.00 2.17
3219 10050 7.148540 TGCCGTATGTAGTTACTTGTTGAAATC 60.149 37.037 0.00 0.00 0.00 2.17
3220 10051 7.064253 GCCGTATGTAGTTACTTGTTGAAATCT 59.936 37.037 0.00 0.00 0.00 2.40
3221 10052 8.592998 CCGTATGTAGTTACTTGTTGAAATCTC 58.407 37.037 0.00 0.00 0.00 2.75
3222 10053 9.355215 CGTATGTAGTTACTTGTTGAAATCTCT 57.645 33.333 0.00 0.00 0.00 3.10
3232 10063 8.964476 ACTTGTTGAAATCTCTAGAAAGACAA 57.036 30.769 0.00 0.00 0.00 3.18
3233 10064 9.050601 ACTTGTTGAAATCTCTAGAAAGACAAG 57.949 33.333 17.75 17.75 33.18 3.16
3234 10065 8.964476 TTGTTGAAATCTCTAGAAAGACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3245 10076 9.291664 CTCTAGAAAGACAAGTATTTAGGAACG 57.708 37.037 0.00 0.00 0.00 3.95
3246 10077 8.248945 TCTAGAAAGACAAGTATTTAGGAACGG 58.751 37.037 0.00 0.00 0.00 4.44
3247 10078 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
3248 10079 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
3249 10080 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
3250 10081 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
3251 10082 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
3252 10083 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
3253 10084 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
3254 10085 5.134725 AGTATTTAGGAACGGAGGGAGTA 57.865 43.478 0.00 0.00 0.00 2.59
3255 10086 5.139001 AGTATTTAGGAACGGAGGGAGTAG 58.861 45.833 0.00 0.00 0.00 2.57
3256 10087 3.463048 TTTAGGAACGGAGGGAGTAGT 57.537 47.619 0.00 0.00 0.00 2.73
3257 10088 4.591321 TTTAGGAACGGAGGGAGTAGTA 57.409 45.455 0.00 0.00 0.00 1.82
3258 10089 4.803329 TTAGGAACGGAGGGAGTAGTAT 57.197 45.455 0.00 0.00 0.00 2.12
3259 10090 2.946785 AGGAACGGAGGGAGTAGTATG 58.053 52.381 0.00 0.00 0.00 2.39
3260 10091 1.340568 GGAACGGAGGGAGTAGTATGC 59.659 57.143 0.00 0.00 0.00 3.14
3261 10092 2.308690 GAACGGAGGGAGTAGTATGCT 58.691 52.381 0.00 0.00 0.00 3.79
3262 10093 2.456073 ACGGAGGGAGTAGTATGCTT 57.544 50.000 0.00 0.00 0.00 3.91
3263 10094 2.032620 ACGGAGGGAGTAGTATGCTTG 58.967 52.381 0.00 0.00 0.00 4.01
3264 10095 1.269831 CGGAGGGAGTAGTATGCTTGC 60.270 57.143 0.00 0.00 0.00 4.01
3265 10096 1.762957 GGAGGGAGTAGTATGCTTGCA 59.237 52.381 0.00 0.00 0.00 4.08
3266 10097 2.370189 GGAGGGAGTAGTATGCTTGCAT 59.630 50.000 12.88 12.88 0.00 3.96
3267 10098 3.397482 GAGGGAGTAGTATGCTTGCATG 58.603 50.000 17.26 0.00 0.00 4.06
3268 10099 1.876156 GGGAGTAGTATGCTTGCATGC 59.124 52.381 17.19 17.19 0.00 4.06
3282 10113 3.110027 CATGCATGCAAACTTCGCA 57.890 47.368 26.68 0.00 44.94 5.10
3292 10123 5.277601 TGCAAACTTCGCATACTACTTTC 57.722 39.130 0.00 0.00 33.55 2.62
3293 10124 4.994852 TGCAAACTTCGCATACTACTTTCT 59.005 37.500 0.00 0.00 33.55 2.52
3294 10125 6.160684 TGCAAACTTCGCATACTACTTTCTA 58.839 36.000 0.00 0.00 33.55 2.10
3295 10126 6.310467 TGCAAACTTCGCATACTACTTTCTAG 59.690 38.462 0.00 0.00 33.55 2.43
3296 10127 6.237861 GCAAACTTCGCATACTACTTTCTAGG 60.238 42.308 0.00 0.00 0.00 3.02
3297 10128 4.934515 ACTTCGCATACTACTTTCTAGGC 58.065 43.478 0.00 0.00 0.00 3.93
3298 10129 4.645588 ACTTCGCATACTACTTTCTAGGCT 59.354 41.667 0.00 0.00 0.00 4.58
3299 10130 4.832590 TCGCATACTACTTTCTAGGCTC 57.167 45.455 0.00 0.00 0.00 4.70
3300 10131 3.250280 TCGCATACTACTTTCTAGGCTCG 59.750 47.826 0.00 0.00 0.00 5.03
3301 10132 3.250280 CGCATACTACTTTCTAGGCTCGA 59.750 47.826 0.00 0.00 0.00 4.04
3302 10133 4.261072 CGCATACTACTTTCTAGGCTCGAA 60.261 45.833 0.00 0.00 0.00 3.71
3303 10134 5.563085 CGCATACTACTTTCTAGGCTCGAAT 60.563 44.000 1.99 0.00 0.00 3.34
3304 10135 6.348295 CGCATACTACTTTCTAGGCTCGAATA 60.348 42.308 1.99 0.00 0.00 1.75
3305 10136 7.368833 GCATACTACTTTCTAGGCTCGAATAA 58.631 38.462 1.99 0.00 0.00 1.40
3306 10137 8.030106 GCATACTACTTTCTAGGCTCGAATAAT 58.970 37.037 1.99 0.00 0.00 1.28
3307 10138 9.915629 CATACTACTTTCTAGGCTCGAATAATT 57.084 33.333 1.99 0.00 0.00 1.40
3343 10174 6.633668 AGTTGAACGATTCTTCTTATGTCG 57.366 37.500 0.00 0.00 38.21 4.35
3344 10175 6.157211 AGTTGAACGATTCTTCTTATGTCGT 58.843 36.000 0.00 0.00 46.19 4.34
3345 10176 6.308282 AGTTGAACGATTCTTCTTATGTCGTC 59.692 38.462 0.00 0.00 43.81 4.20
3346 10177 5.950883 TGAACGATTCTTCTTATGTCGTCT 58.049 37.500 0.00 0.00 43.81 4.18
3347 10178 6.387465 TGAACGATTCTTCTTATGTCGTCTT 58.613 36.000 0.00 0.00 43.81 3.01
3348 10179 6.866770 TGAACGATTCTTCTTATGTCGTCTTT 59.133 34.615 0.00 0.00 43.81 2.52
3349 10180 6.872670 ACGATTCTTCTTATGTCGTCTTTC 57.127 37.500 0.00 0.00 41.11 2.62
3350 10181 6.622549 ACGATTCTTCTTATGTCGTCTTTCT 58.377 36.000 0.00 0.00 41.11 2.52
3351 10182 7.759465 ACGATTCTTCTTATGTCGTCTTTCTA 58.241 34.615 0.00 0.00 41.11 2.10
3352 10183 7.697291 ACGATTCTTCTTATGTCGTCTTTCTAC 59.303 37.037 0.00 0.00 41.11 2.59
3353 10184 7.911205 CGATTCTTCTTATGTCGTCTTTCTACT 59.089 37.037 0.00 0.00 0.00 2.57
3354 10185 8.918961 ATTCTTCTTATGTCGTCTTTCTACTG 57.081 34.615 0.00 0.00 0.00 2.74
3355 10186 6.323266 TCTTCTTATGTCGTCTTTCTACTGC 58.677 40.000 0.00 0.00 0.00 4.40
3356 10187 5.638596 TCTTATGTCGTCTTTCTACTGCA 57.361 39.130 0.00 0.00 0.00 4.41
3357 10188 5.641709 TCTTATGTCGTCTTTCTACTGCAG 58.358 41.667 13.48 13.48 0.00 4.41
3358 10189 5.414765 TCTTATGTCGTCTTTCTACTGCAGA 59.585 40.000 23.35 2.95 0.00 4.26
3359 10190 3.560902 TGTCGTCTTTCTACTGCAGAG 57.439 47.619 23.35 13.48 33.83 3.35
3360 10191 3.146847 TGTCGTCTTTCTACTGCAGAGA 58.853 45.455 23.35 15.66 33.83 3.10
3361 10192 3.189495 TGTCGTCTTTCTACTGCAGAGAG 59.811 47.826 23.35 16.80 36.94 3.20
3362 10193 3.189702 GTCGTCTTTCTACTGCAGAGAGT 59.810 47.826 23.35 0.04 36.93 3.24
3363 10194 3.821600 TCGTCTTTCTACTGCAGAGAGTT 59.178 43.478 23.35 0.00 36.93 3.01
3364 10195 5.001874 TCGTCTTTCTACTGCAGAGAGTTA 58.998 41.667 23.35 0.06 36.93 2.24
3365 10196 5.472478 TCGTCTTTCTACTGCAGAGAGTTAA 59.528 40.000 23.35 13.48 36.93 2.01
3366 10197 6.016527 TCGTCTTTCTACTGCAGAGAGTTAAA 60.017 38.462 23.35 12.47 36.93 1.52
3367 10198 6.088350 CGTCTTTCTACTGCAGAGAGTTAAAC 59.912 42.308 23.35 12.61 36.93 2.01
3368 10199 6.924060 GTCTTTCTACTGCAGAGAGTTAAACA 59.076 38.462 23.35 0.00 36.93 2.83
3369 10200 7.438459 GTCTTTCTACTGCAGAGAGTTAAACAA 59.562 37.037 23.35 7.24 36.93 2.83
3370 10201 7.985184 TCTTTCTACTGCAGAGAGTTAAACAAA 59.015 33.333 23.35 10.61 36.93 2.83
3371 10202 8.500753 TTTCTACTGCAGAGAGTTAAACAAAA 57.499 30.769 23.35 8.51 33.83 2.44
3372 10203 8.677148 TTCTACTGCAGAGAGTTAAACAAAAT 57.323 30.769 23.35 0.00 33.83 1.82
3373 10204 9.772973 TTCTACTGCAGAGAGTTAAACAAAATA 57.227 29.630 23.35 0.00 33.83 1.40
3374 10205 9.772973 TCTACTGCAGAGAGTTAAACAAAATAA 57.227 29.630 23.35 0.00 0.00 1.40
3376 10207 8.451908 ACTGCAGAGAGTTAAACAAAATAAGT 57.548 30.769 23.35 0.00 0.00 2.24
3377 10208 8.903820 ACTGCAGAGAGTTAAACAAAATAAGTT 58.096 29.630 23.35 0.00 0.00 2.66
3378 10209 9.736023 CTGCAGAGAGTTAAACAAAATAAGTTT 57.264 29.630 8.42 0.00 41.63 2.66
3394 10225 9.914131 AAAATAAGTTTGACAATCTTTAGCCTC 57.086 29.630 14.95 0.00 0.00 4.70
3395 10226 5.613358 AAGTTTGACAATCTTTAGCCTCG 57.387 39.130 5.80 0.00 0.00 4.63
3396 10227 4.894784 AGTTTGACAATCTTTAGCCTCGA 58.105 39.130 0.00 0.00 0.00 4.04
3397 10228 4.932200 AGTTTGACAATCTTTAGCCTCGAG 59.068 41.667 5.13 5.13 0.00 4.04
3398 10229 2.893637 TGACAATCTTTAGCCTCGAGC 58.106 47.619 6.99 2.54 44.25 5.03
3408 10239 2.188912 GCCTCGAGCTCTTCTCAGT 58.811 57.895 12.85 0.00 41.98 3.41
3409 10240 0.100503 GCCTCGAGCTCTTCTCAGTC 59.899 60.000 12.85 0.00 41.98 3.51
3410 10241 0.738389 CCTCGAGCTCTTCTCAGTCC 59.262 60.000 12.85 0.00 41.98 3.85
3411 10242 1.681780 CCTCGAGCTCTTCTCAGTCCT 60.682 57.143 12.85 0.00 41.98 3.85
3412 10243 2.091541 CTCGAGCTCTTCTCAGTCCTT 58.908 52.381 12.85 0.00 41.98 3.36
3413 10244 2.491693 CTCGAGCTCTTCTCAGTCCTTT 59.508 50.000 12.85 0.00 41.98 3.11
3414 10245 2.894126 TCGAGCTCTTCTCAGTCCTTTT 59.106 45.455 12.85 0.00 41.98 2.27
3415 10246 3.322254 TCGAGCTCTTCTCAGTCCTTTTT 59.678 43.478 12.85 0.00 41.98 1.94
3444 10275 9.965824 TTTTGAAAGAAAAGGTAGATCATGTTC 57.034 29.630 0.00 0.00 0.00 3.18
3445 10276 8.924511 TTGAAAGAAAAGGTAGATCATGTTCT 57.075 30.769 11.00 11.00 0.00 3.01
3447 10278 9.436957 TGAAAGAAAAGGTAGATCATGTTCTAC 57.563 33.333 26.01 26.01 44.84 2.59
3457 10288 8.894768 GTAGATCATGTTCTACCTTATGCTTT 57.105 34.615 24.54 0.00 41.41 3.51
3458 10289 8.983724 GTAGATCATGTTCTACCTTATGCTTTC 58.016 37.037 24.54 4.16 41.41 2.62
3459 10290 7.568349 AGATCATGTTCTACCTTATGCTTTCA 58.432 34.615 4.42 0.00 0.00 2.69
3460 10291 8.049117 AGATCATGTTCTACCTTATGCTTTCAA 58.951 33.333 4.42 0.00 0.00 2.69
3461 10292 7.994425 TCATGTTCTACCTTATGCTTTCAAA 57.006 32.000 0.00 0.00 0.00 2.69
3462 10293 8.402798 TCATGTTCTACCTTATGCTTTCAAAA 57.597 30.769 0.00 0.00 0.00 2.44
3463 10294 8.296713 TCATGTTCTACCTTATGCTTTCAAAAC 58.703 33.333 0.00 0.00 0.00 2.43
3464 10295 7.575414 TGTTCTACCTTATGCTTTCAAAACA 57.425 32.000 0.00 0.00 0.00 2.83
3465 10296 7.648142 TGTTCTACCTTATGCTTTCAAAACAG 58.352 34.615 0.00 0.00 0.00 3.16
3466 10297 6.817765 TCTACCTTATGCTTTCAAAACAGG 57.182 37.500 0.00 0.00 0.00 4.00
3467 10298 4.257267 ACCTTATGCTTTCAAAACAGGC 57.743 40.909 0.00 0.00 0.00 4.85
3468 10299 3.006859 ACCTTATGCTTTCAAAACAGGCC 59.993 43.478 0.00 0.00 0.00 5.19
3469 10300 3.244976 CTTATGCTTTCAAAACAGGCCG 58.755 45.455 0.00 0.00 0.00 6.13
3470 10301 1.039856 ATGCTTTCAAAACAGGCCGT 58.960 45.000 0.00 0.00 0.00 5.68
3471 10302 1.681538 TGCTTTCAAAACAGGCCGTA 58.318 45.000 0.00 0.00 0.00 4.02
3472 10303 1.606668 TGCTTTCAAAACAGGCCGTAG 59.393 47.619 0.00 0.00 0.00 3.51
3473 10304 1.666023 GCTTTCAAAACAGGCCGTAGC 60.666 52.381 0.00 0.00 38.76 3.58
3483 10314 2.349755 GCCGTAGCCTGGGTGAAA 59.650 61.111 9.02 0.00 0.00 2.69
3484 10315 1.745489 GCCGTAGCCTGGGTGAAAG 60.745 63.158 9.02 0.00 0.00 2.62
3485 10316 1.677552 CCGTAGCCTGGGTGAAAGT 59.322 57.895 9.02 0.00 0.00 2.66
3486 10317 0.391263 CCGTAGCCTGGGTGAAAGTC 60.391 60.000 9.02 0.00 0.00 3.01
3487 10318 0.320374 CGTAGCCTGGGTGAAAGTCA 59.680 55.000 9.02 0.00 0.00 3.41
3488 10319 1.066143 CGTAGCCTGGGTGAAAGTCAT 60.066 52.381 9.02 0.00 0.00 3.06
3489 10320 2.615493 CGTAGCCTGGGTGAAAGTCATT 60.615 50.000 9.02 0.00 0.00 2.57
3490 10321 2.683211 AGCCTGGGTGAAAGTCATTT 57.317 45.000 0.00 0.00 0.00 2.32
3491 10322 2.962859 AGCCTGGGTGAAAGTCATTTT 58.037 42.857 0.00 0.00 0.00 1.82
3492 10323 4.112634 AGCCTGGGTGAAAGTCATTTTA 57.887 40.909 0.00 0.00 0.00 1.52
3493 10324 3.826729 AGCCTGGGTGAAAGTCATTTTAC 59.173 43.478 0.00 0.00 34.91 2.01
3494 10325 3.572255 GCCTGGGTGAAAGTCATTTTACA 59.428 43.478 0.00 0.00 36.80 2.41
3495 10326 4.220602 GCCTGGGTGAAAGTCATTTTACAT 59.779 41.667 0.00 0.00 36.80 2.29
3496 10327 5.713025 CCTGGGTGAAAGTCATTTTACATG 58.287 41.667 0.00 0.00 36.80 3.21
3497 10328 5.243730 CCTGGGTGAAAGTCATTTTACATGT 59.756 40.000 2.69 2.69 36.80 3.21
3498 10329 6.432783 CCTGGGTGAAAGTCATTTTACATGTA 59.567 38.462 0.08 0.08 36.80 2.29
3499 10330 7.362056 CCTGGGTGAAAGTCATTTTACATGTAG 60.362 40.741 5.56 0.00 36.80 2.74
3500 10331 6.432783 TGGGTGAAAGTCATTTTACATGTAGG 59.567 38.462 5.56 0.00 36.80 3.18
3501 10332 6.322491 GGTGAAAGTCATTTTACATGTAGGC 58.678 40.000 5.56 0.00 36.80 3.93
3502 10333 6.021596 GTGAAAGTCATTTTACATGTAGGCG 58.978 40.000 5.56 0.00 35.54 5.52
3503 10334 5.703592 TGAAAGTCATTTTACATGTAGGCGT 59.296 36.000 5.56 0.00 0.00 5.68
3504 10335 6.205853 TGAAAGTCATTTTACATGTAGGCGTT 59.794 34.615 5.56 0.76 0.00 4.84
3505 10336 5.796350 AGTCATTTTACATGTAGGCGTTC 57.204 39.130 5.56 0.00 0.00 3.95
3506 10337 5.488341 AGTCATTTTACATGTAGGCGTTCT 58.512 37.500 5.56 0.58 0.00 3.01
3507 10338 6.636705 AGTCATTTTACATGTAGGCGTTCTA 58.363 36.000 5.56 0.00 0.00 2.10
3508 10339 7.272978 AGTCATTTTACATGTAGGCGTTCTAT 58.727 34.615 5.56 0.00 0.00 1.98
3509 10340 7.438459 AGTCATTTTACATGTAGGCGTTCTATC 59.562 37.037 5.56 0.00 0.00 2.08
3510 10341 7.223971 GTCATTTTACATGTAGGCGTTCTATCA 59.776 37.037 5.56 0.00 0.00 2.15
3511 10342 7.438160 TCATTTTACATGTAGGCGTTCTATCAG 59.562 37.037 5.56 0.00 0.00 2.90
3512 10343 3.099267 ACATGTAGGCGTTCTATCAGC 57.901 47.619 0.00 0.00 0.00 4.26
3516 10347 4.954933 GGCGTTCTATCAGCCCAA 57.045 55.556 0.00 0.00 44.80 4.12
3517 10348 2.695314 GGCGTTCTATCAGCCCAAG 58.305 57.895 0.00 0.00 44.80 3.61
3518 10349 0.178068 GGCGTTCTATCAGCCCAAGA 59.822 55.000 0.00 0.00 44.80 3.02
3519 10350 1.406887 GGCGTTCTATCAGCCCAAGAA 60.407 52.381 0.00 0.00 44.80 2.52
3520 10351 1.936547 GCGTTCTATCAGCCCAAGAAG 59.063 52.381 0.00 0.00 30.22 2.85
3521 10352 2.418746 GCGTTCTATCAGCCCAAGAAGA 60.419 50.000 0.00 0.00 30.22 2.87
3522 10353 3.742640 GCGTTCTATCAGCCCAAGAAGAT 60.743 47.826 0.00 0.00 30.22 2.40
3523 10354 4.501571 GCGTTCTATCAGCCCAAGAAGATA 60.502 45.833 0.00 0.00 30.22 1.98
3524 10355 5.226396 CGTTCTATCAGCCCAAGAAGATAG 58.774 45.833 0.00 0.00 40.65 2.08
3525 10356 5.010112 CGTTCTATCAGCCCAAGAAGATAGA 59.990 44.000 6.85 6.85 44.17 1.98
3526 10357 6.220201 GTTCTATCAGCCCAAGAAGATAGAC 58.780 44.000 9.74 3.93 44.99 2.59
3527 10358 3.742433 ATCAGCCCAAGAAGATAGACG 57.258 47.619 0.00 0.00 0.00 4.18
3528 10359 2.457598 TCAGCCCAAGAAGATAGACGT 58.542 47.619 0.00 0.00 0.00 4.34
3529 10360 2.832129 TCAGCCCAAGAAGATAGACGTT 59.168 45.455 0.00 0.00 0.00 3.99
3530 10361 3.119101 TCAGCCCAAGAAGATAGACGTTC 60.119 47.826 0.00 0.00 0.00 3.95
3531 10362 2.168728 AGCCCAAGAAGATAGACGTTCC 59.831 50.000 0.00 0.00 0.00 3.62
3532 10363 2.742204 GCCCAAGAAGATAGACGTTCCC 60.742 54.545 0.00 0.00 0.00 3.97
3533 10364 2.766828 CCCAAGAAGATAGACGTTCCCT 59.233 50.000 0.00 0.00 0.00 4.20
3534 10365 3.430929 CCCAAGAAGATAGACGTTCCCTG 60.431 52.174 0.00 0.00 0.00 4.45
3535 10366 3.447586 CCAAGAAGATAGACGTTCCCTGA 59.552 47.826 0.00 0.00 0.00 3.86
3536 10367 4.425520 CAAGAAGATAGACGTTCCCTGAC 58.574 47.826 0.00 0.00 0.00 3.51
3537 10368 3.698289 AGAAGATAGACGTTCCCTGACA 58.302 45.455 0.00 0.00 0.00 3.58
3538 10369 4.282496 AGAAGATAGACGTTCCCTGACAT 58.718 43.478 0.00 0.00 0.00 3.06
3539 10370 4.712337 AGAAGATAGACGTTCCCTGACATT 59.288 41.667 0.00 0.00 0.00 2.71
3540 10371 5.187967 AGAAGATAGACGTTCCCTGACATTT 59.812 40.000 0.00 0.00 0.00 2.32
3541 10372 5.012328 AGATAGACGTTCCCTGACATTTC 57.988 43.478 0.00 0.00 0.00 2.17
3542 10373 2.474410 AGACGTTCCCTGACATTTCC 57.526 50.000 0.00 0.00 0.00 3.13
3543 10374 1.003233 AGACGTTCCCTGACATTTCCC 59.997 52.381 0.00 0.00 0.00 3.97
3544 10375 1.003233 GACGTTCCCTGACATTTCCCT 59.997 52.381 0.00 0.00 0.00 4.20
3545 10376 1.003233 ACGTTCCCTGACATTTCCCTC 59.997 52.381 0.00 0.00 0.00 4.30
3546 10377 1.739067 GTTCCCTGACATTTCCCTCG 58.261 55.000 0.00 0.00 0.00 4.63
3547 10378 0.618458 TTCCCTGACATTTCCCTCGG 59.382 55.000 0.00 0.00 0.00 4.63
3548 10379 1.224592 CCCTGACATTTCCCTCGGG 59.775 63.158 0.00 0.00 33.21 5.14
3549 10380 1.562672 CCCTGACATTTCCCTCGGGT 61.563 60.000 1.18 0.00 36.47 5.28
3550 10381 0.392998 CCTGACATTTCCCTCGGGTG 60.393 60.000 1.18 0.00 36.47 4.61
3551 10382 1.002624 TGACATTTCCCTCGGGTGC 60.003 57.895 1.18 0.00 36.47 5.01
3552 10383 1.299976 GACATTTCCCTCGGGTGCT 59.700 57.895 1.18 0.00 36.47 4.40
3553 10384 0.322546 GACATTTCCCTCGGGTGCTT 60.323 55.000 1.18 0.00 36.47 3.91
3554 10385 0.609131 ACATTTCCCTCGGGTGCTTG 60.609 55.000 1.18 0.00 36.47 4.01
3555 10386 1.678970 ATTTCCCTCGGGTGCTTGC 60.679 57.895 1.18 0.00 36.47 4.01
3556 10387 2.424842 ATTTCCCTCGGGTGCTTGCA 62.425 55.000 1.18 0.00 36.47 4.08
3557 10388 3.551496 TTCCCTCGGGTGCTTGCAG 62.551 63.158 1.18 0.00 36.47 4.41
3558 10389 4.335647 CCCTCGGGTGCTTGCAGT 62.336 66.667 0.00 0.00 0.00 4.40
3559 10390 2.743928 CCTCGGGTGCTTGCAGTC 60.744 66.667 0.00 0.00 0.00 3.51
3560 10391 2.345244 CTCGGGTGCTTGCAGTCT 59.655 61.111 0.00 0.00 0.00 3.24
3561 10392 1.739562 CTCGGGTGCTTGCAGTCTC 60.740 63.158 0.00 0.00 0.00 3.36
3562 10393 2.743928 CGGGTGCTTGCAGTCTCC 60.744 66.667 0.00 0.00 0.00 3.71
3563 10394 2.743928 GGGTGCTTGCAGTCTCCG 60.744 66.667 0.00 0.00 0.00 4.63
3564 10395 2.031163 GGTGCTTGCAGTCTCCGT 59.969 61.111 0.00 0.00 0.00 4.69
3565 10396 1.292223 GGTGCTTGCAGTCTCCGTA 59.708 57.895 0.00 0.00 0.00 4.02
3566 10397 0.737715 GGTGCTTGCAGTCTCCGTAG 60.738 60.000 0.00 0.00 0.00 3.51
3567 10398 1.079819 TGCTTGCAGTCTCCGTAGC 60.080 57.895 0.00 0.00 0.00 3.58
3568 10399 1.216710 GCTTGCAGTCTCCGTAGCT 59.783 57.895 0.00 0.00 0.00 3.32
3569 10400 0.390472 GCTTGCAGTCTCCGTAGCTT 60.390 55.000 0.00 0.00 0.00 3.74
3570 10401 1.354040 CTTGCAGTCTCCGTAGCTTG 58.646 55.000 0.00 0.00 0.00 4.01
3571 10402 0.966179 TTGCAGTCTCCGTAGCTTGA 59.034 50.000 0.00 0.00 0.00 3.02
3572 10403 1.186200 TGCAGTCTCCGTAGCTTGAT 58.814 50.000 0.00 0.00 0.00 2.57
3573 10404 1.135139 TGCAGTCTCCGTAGCTTGATC 59.865 52.381 0.00 0.00 0.00 2.92
3574 10405 1.135139 GCAGTCTCCGTAGCTTGATCA 59.865 52.381 0.00 0.00 0.00 2.92
3575 10406 2.797792 GCAGTCTCCGTAGCTTGATCAG 60.798 54.545 0.00 0.00 0.00 2.90
3576 10407 2.028130 AGTCTCCGTAGCTTGATCAGG 58.972 52.381 0.00 0.00 0.00 3.86
3577 10408 1.751924 GTCTCCGTAGCTTGATCAGGT 59.248 52.381 6.70 4.63 36.98 4.00
3578 10409 2.025155 TCTCCGTAGCTTGATCAGGTC 58.975 52.381 6.70 0.00 34.13 3.85
3579 10410 0.738975 TCCGTAGCTTGATCAGGTCG 59.261 55.000 6.70 8.93 34.13 4.79
3580 10411 0.249073 CCGTAGCTTGATCAGGTCGG 60.249 60.000 17.58 17.58 37.36 4.79
3581 10412 0.872021 CGTAGCTTGATCAGGTCGGC 60.872 60.000 6.70 3.16 34.13 5.54
3582 10413 0.175760 GTAGCTTGATCAGGTCGGCA 59.824 55.000 6.70 0.00 34.13 5.69
3583 10414 0.901827 TAGCTTGATCAGGTCGGCAA 59.098 50.000 6.70 0.00 34.13 4.52
3584 10415 0.674895 AGCTTGATCAGGTCGGCAAC 60.675 55.000 6.70 0.00 32.81 4.17
3592 10423 2.741092 GGTCGGCAACCTCAGTGA 59.259 61.111 0.00 0.00 45.45 3.41
3593 10424 1.374758 GGTCGGCAACCTCAGTGAG 60.375 63.158 13.56 13.56 45.45 3.51
3594 10425 1.666011 GTCGGCAACCTCAGTGAGA 59.334 57.895 22.09 0.00 0.00 3.27
3595 10426 0.033504 GTCGGCAACCTCAGTGAGAA 59.966 55.000 22.09 0.00 0.00 2.87
3596 10427 0.976641 TCGGCAACCTCAGTGAGAAT 59.023 50.000 22.09 6.38 0.00 2.40
3597 10428 1.066858 TCGGCAACCTCAGTGAGAATC 60.067 52.381 22.09 7.31 0.00 2.52
3598 10429 1.743996 GGCAACCTCAGTGAGAATCC 58.256 55.000 22.09 12.31 0.00 3.01
3599 10430 1.280421 GGCAACCTCAGTGAGAATCCT 59.720 52.381 22.09 0.00 0.00 3.24
3600 10431 2.626840 GCAACCTCAGTGAGAATCCTC 58.373 52.381 22.09 1.98 39.86 3.71
3601 10432 2.679349 GCAACCTCAGTGAGAATCCTCC 60.679 54.545 22.09 0.00 38.66 4.30
3602 10433 1.872773 ACCTCAGTGAGAATCCTCCC 58.127 55.000 22.09 0.00 38.66 4.30
3603 10434 1.079490 ACCTCAGTGAGAATCCTCCCA 59.921 52.381 22.09 0.00 38.66 4.37
3604 10435 1.761784 CCTCAGTGAGAATCCTCCCAG 59.238 57.143 22.09 0.00 38.66 4.45
3605 10436 1.138661 CTCAGTGAGAATCCTCCCAGC 59.861 57.143 15.46 0.00 38.66 4.85
3606 10437 1.202330 CAGTGAGAATCCTCCCAGCT 58.798 55.000 0.00 0.00 38.66 4.24
3607 10438 1.134461 CAGTGAGAATCCTCCCAGCTG 60.134 57.143 6.78 6.78 38.66 4.24
3608 10439 0.908198 GTGAGAATCCTCCCAGCTGT 59.092 55.000 13.81 0.00 38.66 4.40
3609 10440 1.134551 GTGAGAATCCTCCCAGCTGTC 60.135 57.143 13.81 1.21 38.66 3.51
3610 10441 0.467804 GAGAATCCTCCCAGCTGTCC 59.532 60.000 13.81 0.00 33.30 4.02
3611 10442 0.252881 AGAATCCTCCCAGCTGTCCA 60.253 55.000 13.81 0.00 0.00 4.02
3612 10443 0.620556 GAATCCTCCCAGCTGTCCAA 59.379 55.000 13.81 0.00 0.00 3.53
3613 10444 0.329596 AATCCTCCCAGCTGTCCAAC 59.670 55.000 13.81 0.00 0.00 3.77
3614 10445 0.842030 ATCCTCCCAGCTGTCCAACA 60.842 55.000 13.81 0.00 0.00 3.33
3615 10446 1.302832 CCTCCCAGCTGTCCAACAC 60.303 63.158 13.81 0.00 0.00 3.32
3616 10447 1.757306 CTCCCAGCTGTCCAACACT 59.243 57.895 13.81 0.00 0.00 3.55
3617 10448 0.109342 CTCCCAGCTGTCCAACACTT 59.891 55.000 13.81 0.00 0.00 3.16
3618 10449 0.179020 TCCCAGCTGTCCAACACTTG 60.179 55.000 13.81 0.00 0.00 3.16
3619 10450 0.466189 CCCAGCTGTCCAACACTTGT 60.466 55.000 13.81 0.00 0.00 3.16
3620 10451 1.392589 CCAGCTGTCCAACACTTGTT 58.607 50.000 13.81 0.00 39.12 2.83
3621 10452 2.571212 CCAGCTGTCCAACACTTGTTA 58.429 47.619 13.81 0.00 36.32 2.41
3622 10453 3.149196 CCAGCTGTCCAACACTTGTTAT 58.851 45.455 13.81 0.00 36.32 1.89
3623 10454 3.058016 CCAGCTGTCCAACACTTGTTATG 60.058 47.826 13.81 0.00 36.32 1.90
3624 10455 3.814842 CAGCTGTCCAACACTTGTTATGA 59.185 43.478 5.25 0.00 36.32 2.15
3625 10456 4.275689 CAGCTGTCCAACACTTGTTATGAA 59.724 41.667 5.25 0.00 36.32 2.57
3626 10457 4.887071 AGCTGTCCAACACTTGTTATGAAA 59.113 37.500 0.00 0.00 36.32 2.69
3627 10458 5.359576 AGCTGTCCAACACTTGTTATGAAAA 59.640 36.000 0.00 0.00 36.32 2.29
3628 10459 6.039616 GCTGTCCAACACTTGTTATGAAAAA 58.960 36.000 0.00 0.00 36.32 1.94
3629 10460 6.019881 GCTGTCCAACACTTGTTATGAAAAAC 60.020 38.462 0.00 0.00 36.32 2.43
3630 10461 7.164230 TGTCCAACACTTGTTATGAAAAACT 57.836 32.000 0.00 0.00 36.32 2.66
3631 10462 7.607250 TGTCCAACACTTGTTATGAAAAACTT 58.393 30.769 0.00 0.00 36.32 2.66
3632 10463 7.543868 TGTCCAACACTTGTTATGAAAAACTTG 59.456 33.333 0.00 0.00 36.32 3.16
3633 10464 6.533367 TCCAACACTTGTTATGAAAAACTTGC 59.467 34.615 0.00 0.00 36.32 4.01
3634 10465 6.534793 CCAACACTTGTTATGAAAAACTTGCT 59.465 34.615 0.00 0.00 36.32 3.91
3635 10466 7.254084 CCAACACTTGTTATGAAAAACTTGCTC 60.254 37.037 0.00 0.00 36.32 4.26
3636 10467 5.971202 ACACTTGTTATGAAAAACTTGCTCG 59.029 36.000 0.00 0.00 0.00 5.03
3637 10468 5.971202 CACTTGTTATGAAAAACTTGCTCGT 59.029 36.000 0.00 0.00 0.00 4.18
3638 10469 6.472163 CACTTGTTATGAAAAACTTGCTCGTT 59.528 34.615 0.00 0.00 0.00 3.85
3639 10470 6.691388 ACTTGTTATGAAAAACTTGCTCGTTC 59.309 34.615 0.00 0.00 0.00 3.95
3640 10471 5.516090 TGTTATGAAAAACTTGCTCGTTCC 58.484 37.500 0.00 0.00 0.00 3.62
3641 10472 2.748461 TGAAAAACTTGCTCGTTCCG 57.252 45.000 0.00 0.00 0.00 4.30
3642 10473 2.281517 TGAAAAACTTGCTCGTTCCGA 58.718 42.857 0.00 0.00 0.00 4.55
3643 10474 2.875933 TGAAAAACTTGCTCGTTCCGAT 59.124 40.909 0.00 0.00 34.61 4.18
3644 10475 3.059188 TGAAAAACTTGCTCGTTCCGATC 60.059 43.478 0.00 0.00 34.61 3.69
3645 10476 2.163818 AAACTTGCTCGTTCCGATCA 57.836 45.000 0.00 0.00 34.61 2.92
3646 10477 2.386661 AACTTGCTCGTTCCGATCAT 57.613 45.000 0.00 0.00 32.25 2.45
3647 10478 1.645034 ACTTGCTCGTTCCGATCATG 58.355 50.000 0.00 0.00 32.25 3.07
3648 10479 0.302890 CTTGCTCGTTCCGATCATGC 59.697 55.000 0.00 0.00 32.25 4.06
3649 10480 1.089481 TTGCTCGTTCCGATCATGCC 61.089 55.000 0.00 0.00 32.25 4.40
3650 10481 1.521457 GCTCGTTCCGATCATGCCA 60.521 57.895 0.00 0.00 34.61 4.92
3651 10482 1.089481 GCTCGTTCCGATCATGCCAA 61.089 55.000 0.00 0.00 34.61 4.52
3652 10483 1.368641 CTCGTTCCGATCATGCCAAA 58.631 50.000 0.00 0.00 34.61 3.28
3653 10484 1.328680 CTCGTTCCGATCATGCCAAAG 59.671 52.381 0.00 0.00 34.61 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.254657 CCGTCAGTAAAGGGCAATTTCAA 59.745 43.478 0.00 0.00 0.00 2.69
52 53 1.895707 GAGAGGCGGCCATCCAATG 60.896 63.158 23.09 0.00 0.00 2.82
102 104 2.586357 GCTCCGGCATTCGTCCTC 60.586 66.667 0.00 0.00 38.54 3.71
103 105 3.390521 TGCTCCGGCATTCGTCCT 61.391 61.111 0.00 0.00 44.28 3.85
117 119 2.306847 ACACTGACCCGAAAATTTGCT 58.693 42.857 0.00 0.00 0.00 3.91
128 130 0.321996 GGAGTCTCCAACACTGACCC 59.678 60.000 14.46 0.00 36.28 4.46
169 171 7.604549 TGTAATACAATCGACAACTAGACCAA 58.395 34.615 0.00 0.00 0.00 3.67
316 320 3.247411 CGAAACTATCTGCACACACACAA 59.753 43.478 0.00 0.00 0.00 3.33
343 347 2.045731 CCCGAAAAAGGCCGCCTA 60.046 61.111 13.73 0.00 31.13 3.93
405 590 9.973450 TCTGCAAAAACAAAAATATTAGTGCTA 57.027 25.926 0.00 0.00 0.00 3.49
448 634 7.405769 CACGGCACAAAGTTTTATGAAAAATT 58.594 30.769 1.53 0.00 40.00 1.82
532 723 6.783759 CCGTTTTTCTAAAGCATTTTAAACGC 59.216 34.615 0.00 1.32 40.99 4.84
545 736 5.049267 GTGCATCTACACCCGTTTTTCTAAA 60.049 40.000 0.00 0.00 34.35 1.85
549 740 3.197434 GTGCATCTACACCCGTTTTTC 57.803 47.619 0.00 0.00 34.35 2.29
626 826 8.125448 CCACTTCTTCTTTTTCTCACAAAGTAG 58.875 37.037 0.00 0.00 33.61 2.57
627 827 7.415206 GCCACTTCTTCTTTTTCTCACAAAGTA 60.415 37.037 0.00 0.00 33.61 2.24
628 828 6.625960 GCCACTTCTTCTTTTTCTCACAAAGT 60.626 38.462 0.00 0.00 33.61 2.66
629 829 5.745769 GCCACTTCTTCTTTTTCTCACAAAG 59.254 40.000 0.00 0.00 33.22 2.77
630 830 5.394115 GGCCACTTCTTCTTTTTCTCACAAA 60.394 40.000 0.00 0.00 0.00 2.83
633 833 3.004839 GGGCCACTTCTTCTTTTTCTCAC 59.995 47.826 4.39 0.00 0.00 3.51
636 836 2.230660 CGGGCCACTTCTTCTTTTTCT 58.769 47.619 4.39 0.00 0.00 2.52
640 840 1.603739 GCCGGGCCACTTCTTCTTT 60.604 57.895 8.12 0.00 0.00 2.52
699 907 1.544246 CGGAGGGATTTTGGTTTGGAC 59.456 52.381 0.00 0.00 0.00 4.02
735 943 9.218440 AGGCATTATTTCGTTTGATTTGATTTT 57.782 25.926 0.00 0.00 0.00 1.82
736 944 8.776376 AGGCATTATTTCGTTTGATTTGATTT 57.224 26.923 0.00 0.00 0.00 2.17
737 945 8.253113 AGAGGCATTATTTCGTTTGATTTGATT 58.747 29.630 0.00 0.00 0.00 2.57
738 946 7.775120 AGAGGCATTATTTCGTTTGATTTGAT 58.225 30.769 0.00 0.00 0.00 2.57
739 947 7.156876 AGAGGCATTATTTCGTTTGATTTGA 57.843 32.000 0.00 0.00 0.00 2.69
843 1057 1.056660 AAGGAGTCTTTGGCCTTCGA 58.943 50.000 3.32 0.00 37.46 3.71
848 1062 2.335712 CGGCAAGGAGTCTTTGGCC 61.336 63.158 28.37 21.00 38.18 5.36
935 1149 4.000988 GAGGCGACAACTATTTTCTTGGA 58.999 43.478 0.00 0.00 0.00 3.53
1539 4578 1.219124 GGCCTTGTCGATCTGCTCA 59.781 57.895 0.00 0.00 0.00 4.26
2480 5543 3.568007 TCAACTTAGCAAAACCGCAAGAT 59.432 39.130 0.00 0.00 43.02 2.40
2482 5545 3.347958 TCAACTTAGCAAAACCGCAAG 57.652 42.857 0.00 0.00 0.00 4.01
2483 5546 5.182190 TCATATCAACTTAGCAAAACCGCAA 59.818 36.000 0.00 0.00 0.00 4.85
2484 5547 4.697828 TCATATCAACTTAGCAAAACCGCA 59.302 37.500 0.00 0.00 0.00 5.69
2485 5548 5.229921 TCATATCAACTTAGCAAAACCGC 57.770 39.130 0.00 0.00 0.00 5.68
2486 5549 5.163764 TGCTCATATCAACTTAGCAAAACCG 60.164 40.000 0.00 0.00 40.05 4.44
2487 5550 6.194796 TGCTCATATCAACTTAGCAAAACC 57.805 37.500 0.00 0.00 40.05 3.27
2489 5552 5.163622 GGCTGCTCATATCAACTTAGCAAAA 60.164 40.000 0.00 0.00 42.21 2.44
2721 5904 2.223291 TCGACTTCGATGGTGTAGCCA 61.223 52.381 0.00 0.00 43.93 4.75
2873 6056 2.585170 CTTCTCCTCGGTCGCTGTCG 62.585 65.000 0.00 0.00 0.00 4.35
2877 6060 1.316706 CCTTCTTCTCCTCGGTCGCT 61.317 60.000 0.00 0.00 0.00 4.93
2885 6068 1.274712 CAGGCAGTCCTTCTTCTCCT 58.725 55.000 0.00 0.00 41.93 3.69
2889 6072 0.036022 AGCACAGGCAGTCCTTCTTC 59.964 55.000 0.00 0.00 41.93 2.87
2973 6156 2.577059 CTAGAGTTGGCGGCGGAA 59.423 61.111 9.78 0.00 0.00 4.30
3018 9840 8.222433 GCTCAAATCATCAAAATCGAGATCTAG 58.778 37.037 0.00 0.00 0.00 2.43
3072 9903 5.678919 GGAGTAGTAGTAATCAAACGTACGC 59.321 44.000 16.72 0.00 0.00 4.42
3090 9921 3.629142 ATTTTGGAACGGAGGGAGTAG 57.371 47.619 0.00 0.00 0.00 2.57
3091 9922 4.098894 AGTATTTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
3092 9923 2.910977 AGTATTTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
3093 9924 3.629142 AGTATTTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
3094 9925 3.073356 ACAAGTATTTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 0.00 4.20
3095 9926 3.418047 ACAAGTATTTTGGAACGGAGGG 58.582 45.455 0.00 0.00 0.00 4.30
3096 9927 4.324267 AGACAAGTATTTTGGAACGGAGG 58.676 43.478 0.00 0.00 0.00 4.30
3097 9928 5.941948 AAGACAAGTATTTTGGAACGGAG 57.058 39.130 0.00 0.00 0.00 4.63
3098 9929 6.059484 AGAAAGACAAGTATTTTGGAACGGA 58.941 36.000 0.00 0.00 0.00 4.69
3099 9930 6.313744 AGAAAGACAAGTATTTTGGAACGG 57.686 37.500 0.00 0.00 0.00 4.44
3100 9931 7.519002 CCTAGAAAGACAAGTATTTTGGAACG 58.481 38.462 0.00 0.00 0.00 3.95
3101 9932 7.040686 TGCCTAGAAAGACAAGTATTTTGGAAC 60.041 37.037 0.00 0.00 0.00 3.62
3102 9933 7.001674 TGCCTAGAAAGACAAGTATTTTGGAA 58.998 34.615 0.00 0.96 0.00 3.53
3103 9934 6.539173 TGCCTAGAAAGACAAGTATTTTGGA 58.461 36.000 0.00 0.00 0.00 3.53
3104 9935 6.817765 TGCCTAGAAAGACAAGTATTTTGG 57.182 37.500 0.00 0.48 0.00 3.28
3105 9936 9.346725 GAAATGCCTAGAAAGACAAGTATTTTG 57.653 33.333 0.00 0.00 0.00 2.44
3106 9937 9.077885 TGAAATGCCTAGAAAGACAAGTATTTT 57.922 29.630 0.00 0.00 0.00 1.82
3107 9938 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
3108 9939 8.635765 TTGAAATGCCTAGAAAGACAAGTATT 57.364 30.769 0.00 0.00 0.00 1.89
3109 9940 8.635765 TTTGAAATGCCTAGAAAGACAAGTAT 57.364 30.769 0.00 0.00 0.00 2.12
3110 9941 8.514594 CATTTGAAATGCCTAGAAAGACAAGTA 58.485 33.333 4.82 0.00 0.00 2.24
3111 9942 6.959639 TTTGAAATGCCTAGAAAGACAAGT 57.040 33.333 0.00 0.00 0.00 3.16
3112 9943 6.810182 CCATTTGAAATGCCTAGAAAGACAAG 59.190 38.462 12.26 0.00 0.00 3.16
3113 9944 6.493115 TCCATTTGAAATGCCTAGAAAGACAA 59.507 34.615 12.26 0.00 0.00 3.18
3114 9945 6.009589 TCCATTTGAAATGCCTAGAAAGACA 58.990 36.000 12.26 0.00 0.00 3.41
3115 9946 6.151817 AGTCCATTTGAAATGCCTAGAAAGAC 59.848 38.462 12.26 10.86 0.00 3.01
3116 9947 6.248433 AGTCCATTTGAAATGCCTAGAAAGA 58.752 36.000 12.26 0.00 0.00 2.52
3117 9948 6.151648 TGAGTCCATTTGAAATGCCTAGAAAG 59.848 38.462 12.26 0.00 0.00 2.62
3118 9949 6.009589 TGAGTCCATTTGAAATGCCTAGAAA 58.990 36.000 12.26 0.00 0.00 2.52
3119 9950 5.569355 TGAGTCCATTTGAAATGCCTAGAA 58.431 37.500 12.26 0.00 0.00 2.10
3120 9951 5.178096 TGAGTCCATTTGAAATGCCTAGA 57.822 39.130 12.26 1.83 0.00 2.43
3121 9952 5.183713 TGTTGAGTCCATTTGAAATGCCTAG 59.816 40.000 12.26 0.00 0.00 3.02
3122 9953 5.076182 TGTTGAGTCCATTTGAAATGCCTA 58.924 37.500 12.26 0.00 0.00 3.93
3123 9954 3.896888 TGTTGAGTCCATTTGAAATGCCT 59.103 39.130 12.26 9.70 0.00 4.75
3124 9955 4.255833 TGTTGAGTCCATTTGAAATGCC 57.744 40.909 12.26 5.23 0.00 4.40
3125 9956 5.512788 CGTATGTTGAGTCCATTTGAAATGC 59.487 40.000 12.26 0.23 0.00 3.56
3126 9957 6.029607 CCGTATGTTGAGTCCATTTGAAATG 58.970 40.000 10.84 10.84 0.00 2.32
3127 9958 5.943416 TCCGTATGTTGAGTCCATTTGAAAT 59.057 36.000 0.00 0.00 0.00 2.17
3128 9959 5.180492 GTCCGTATGTTGAGTCCATTTGAAA 59.820 40.000 0.00 0.00 0.00 2.69
3129 9960 4.693566 GTCCGTATGTTGAGTCCATTTGAA 59.306 41.667 0.00 0.00 0.00 2.69
3130 9961 4.250464 GTCCGTATGTTGAGTCCATTTGA 58.750 43.478 0.00 0.00 0.00 2.69
3131 9962 3.062099 CGTCCGTATGTTGAGTCCATTTG 59.938 47.826 0.00 0.00 0.00 2.32
3132 9963 3.259064 CGTCCGTATGTTGAGTCCATTT 58.741 45.455 0.00 0.00 0.00 2.32
3133 9964 2.232941 ACGTCCGTATGTTGAGTCCATT 59.767 45.455 0.00 0.00 0.00 3.16
3134 9965 1.822990 ACGTCCGTATGTTGAGTCCAT 59.177 47.619 0.00 0.00 0.00 3.41
3135 9966 1.250328 ACGTCCGTATGTTGAGTCCA 58.750 50.000 0.00 0.00 0.00 4.02
3136 9967 3.705043 ATACGTCCGTATGTTGAGTCC 57.295 47.619 11.25 0.00 39.56 3.85
3147 9978 9.241317 CTTTAAAATATGTCTACATACGTCCGT 57.759 33.333 4.98 0.00 41.15 4.69
3148 9979 9.241317 ACTTTAAAATATGTCTACATACGTCCG 57.759 33.333 4.98 0.00 41.15 4.79
3169 10000 9.677567 GCACAAAATGAGTGAATCTAAACTTTA 57.322 29.630 0.00 0.00 39.30 1.85
3170 10001 7.653311 GGCACAAAATGAGTGAATCTAAACTTT 59.347 33.333 0.00 0.00 39.30 2.66
3171 10002 7.147976 GGCACAAAATGAGTGAATCTAAACTT 58.852 34.615 0.00 0.00 39.30 2.66
3172 10003 6.568462 CGGCACAAAATGAGTGAATCTAAACT 60.568 38.462 0.00 0.00 39.30 2.66
3173 10004 5.569059 CGGCACAAAATGAGTGAATCTAAAC 59.431 40.000 0.00 0.00 39.30 2.01
3174 10005 5.240623 ACGGCACAAAATGAGTGAATCTAAA 59.759 36.000 0.00 0.00 39.30 1.85
3175 10006 4.759693 ACGGCACAAAATGAGTGAATCTAA 59.240 37.500 0.00 0.00 39.30 2.10
3176 10007 4.323417 ACGGCACAAAATGAGTGAATCTA 58.677 39.130 0.00 0.00 39.30 1.98
3177 10008 3.149196 ACGGCACAAAATGAGTGAATCT 58.851 40.909 0.00 0.00 39.30 2.40
3178 10009 3.559238 ACGGCACAAAATGAGTGAATC 57.441 42.857 0.00 0.00 39.30 2.52
3179 10010 4.458989 ACATACGGCACAAAATGAGTGAAT 59.541 37.500 0.00 0.00 39.30 2.57
3180 10011 3.818210 ACATACGGCACAAAATGAGTGAA 59.182 39.130 0.00 0.00 39.30 3.18
3181 10012 3.407698 ACATACGGCACAAAATGAGTGA 58.592 40.909 0.00 0.00 39.30 3.41
3182 10013 3.829886 ACATACGGCACAAAATGAGTG 57.170 42.857 0.00 0.00 39.92 3.51
3183 10014 4.575885 ACTACATACGGCACAAAATGAGT 58.424 39.130 0.00 0.00 0.00 3.41
3184 10015 5.545658 AACTACATACGGCACAAAATGAG 57.454 39.130 0.00 0.00 0.00 2.90
3185 10016 6.167685 AGTAACTACATACGGCACAAAATGA 58.832 36.000 0.00 0.00 0.00 2.57
3186 10017 6.417191 AGTAACTACATACGGCACAAAATG 57.583 37.500 0.00 0.00 0.00 2.32
3187 10018 6.428771 ACAAGTAACTACATACGGCACAAAAT 59.571 34.615 0.00 0.00 0.00 1.82
3188 10019 5.759273 ACAAGTAACTACATACGGCACAAAA 59.241 36.000 0.00 0.00 0.00 2.44
3189 10020 5.299148 ACAAGTAACTACATACGGCACAAA 58.701 37.500 0.00 0.00 0.00 2.83
3190 10021 4.885413 ACAAGTAACTACATACGGCACAA 58.115 39.130 0.00 0.00 0.00 3.33
3191 10022 4.524316 ACAAGTAACTACATACGGCACA 57.476 40.909 0.00 0.00 0.00 4.57
3192 10023 4.925054 TCAACAAGTAACTACATACGGCAC 59.075 41.667 0.00 0.00 0.00 5.01
3193 10024 5.136816 TCAACAAGTAACTACATACGGCA 57.863 39.130 0.00 0.00 0.00 5.69
3194 10025 6.470557 TTTCAACAAGTAACTACATACGGC 57.529 37.500 0.00 0.00 0.00 5.68
3195 10026 8.475331 AGATTTCAACAAGTAACTACATACGG 57.525 34.615 0.00 0.00 0.00 4.02
3196 10027 9.355215 AGAGATTTCAACAAGTAACTACATACG 57.645 33.333 0.00 0.00 0.00 3.06
3207 10038 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
3208 10039 9.050601 ACTTGTCTTTCTAGAGATTTCAACAAG 57.949 33.333 18.42 18.42 32.73 3.16
3209 10040 8.964476 ACTTGTCTTTCTAGAGATTTCAACAA 57.036 30.769 0.00 0.00 0.00 2.83
3219 10050 9.291664 CGTTCCTAAATACTTGTCTTTCTAGAG 57.708 37.037 0.00 0.00 0.00 2.43
3220 10051 8.248945 CCGTTCCTAAATACTTGTCTTTCTAGA 58.751 37.037 0.00 0.00 0.00 2.43
3221 10052 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
3222 10053 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
3223 10054 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
3224 10055 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
3225 10056 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
3226 10057 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
3227 10058 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
3228 10059 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
3229 10060 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
3230 10061 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
3231 10062 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
3232 10063 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
3233 10064 4.892345 ACTACTCCCTCCGTTCCTAAATAC 59.108 45.833 0.00 0.00 0.00 1.89
3234 10065 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
3235 10066 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
3236 10067 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
3237 10068 4.467769 CATACTACTCCCTCCGTTCCTAA 58.532 47.826 0.00 0.00 0.00 2.69
3238 10069 3.749954 GCATACTACTCCCTCCGTTCCTA 60.750 52.174 0.00 0.00 0.00 2.94
3239 10070 2.946785 CATACTACTCCCTCCGTTCCT 58.053 52.381 0.00 0.00 0.00 3.36
3240 10071 1.340568 GCATACTACTCCCTCCGTTCC 59.659 57.143 0.00 0.00 0.00 3.62
3241 10072 2.308690 AGCATACTACTCCCTCCGTTC 58.691 52.381 0.00 0.00 0.00 3.95
3242 10073 2.431057 CAAGCATACTACTCCCTCCGTT 59.569 50.000 0.00 0.00 0.00 4.44
3243 10074 2.032620 CAAGCATACTACTCCCTCCGT 58.967 52.381 0.00 0.00 0.00 4.69
3244 10075 1.269831 GCAAGCATACTACTCCCTCCG 60.270 57.143 0.00 0.00 0.00 4.63
3245 10076 1.762957 TGCAAGCATACTACTCCCTCC 59.237 52.381 0.00 0.00 0.00 4.30
3246 10077 3.397482 CATGCAAGCATACTACTCCCTC 58.603 50.000 7.29 0.00 34.91 4.30
3247 10078 2.486191 GCATGCAAGCATACTACTCCCT 60.486 50.000 14.21 0.00 34.91 4.20
3248 10079 1.876156 GCATGCAAGCATACTACTCCC 59.124 52.381 14.21 0.00 34.91 4.30
3249 10080 2.564771 TGCATGCAAGCATACTACTCC 58.435 47.619 20.30 0.00 40.11 3.85
3264 10095 3.110027 TGCGAAGTTTGCATGCATG 57.890 47.368 23.37 22.70 37.44 4.06
3271 10102 5.532025 AGAAAGTAGTATGCGAAGTTTGC 57.468 39.130 8.26 8.26 0.00 3.68
3272 10103 6.237861 GCCTAGAAAGTAGTATGCGAAGTTTG 60.238 42.308 0.00 0.00 0.00 2.93
3273 10104 5.811100 GCCTAGAAAGTAGTATGCGAAGTTT 59.189 40.000 0.00 0.00 0.00 2.66
3274 10105 5.127356 AGCCTAGAAAGTAGTATGCGAAGTT 59.873 40.000 0.00 0.00 0.00 2.66
3275 10106 4.645588 AGCCTAGAAAGTAGTATGCGAAGT 59.354 41.667 0.00 0.00 0.00 3.01
3276 10107 5.189659 AGCCTAGAAAGTAGTATGCGAAG 57.810 43.478 0.00 0.00 0.00 3.79
3277 10108 4.261072 CGAGCCTAGAAAGTAGTATGCGAA 60.261 45.833 0.00 0.00 0.00 4.70
3278 10109 3.250280 CGAGCCTAGAAAGTAGTATGCGA 59.750 47.826 0.00 0.00 0.00 5.10
3279 10110 3.250280 TCGAGCCTAGAAAGTAGTATGCG 59.750 47.826 0.00 0.00 0.00 4.73
3280 10111 4.832590 TCGAGCCTAGAAAGTAGTATGC 57.167 45.455 0.00 0.00 0.00 3.14
3281 10112 9.915629 AATTATTCGAGCCTAGAAAGTAGTATG 57.084 33.333 0.00 0.00 0.00 2.39
3317 10148 8.644619 CGACATAAGAAGAATCGTTCAACTTTA 58.355 33.333 0.00 0.00 32.64 1.85
3318 10149 7.170998 ACGACATAAGAAGAATCGTTCAACTTT 59.829 33.333 0.00 0.00 43.04 2.66
3319 10150 6.645415 ACGACATAAGAAGAATCGTTCAACTT 59.355 34.615 0.00 0.00 43.04 2.66
3320 10151 6.157211 ACGACATAAGAAGAATCGTTCAACT 58.843 36.000 0.00 0.00 43.04 3.16
3321 10152 6.308282 AGACGACATAAGAAGAATCGTTCAAC 59.692 38.462 0.00 0.00 45.39 3.18
3322 10153 6.387465 AGACGACATAAGAAGAATCGTTCAA 58.613 36.000 0.00 0.00 45.39 2.69
3323 10154 5.950883 AGACGACATAAGAAGAATCGTTCA 58.049 37.500 0.00 0.00 45.39 3.18
3324 10155 6.872670 AAGACGACATAAGAAGAATCGTTC 57.127 37.500 0.00 0.00 45.39 3.95
3325 10156 7.091443 AGAAAGACGACATAAGAAGAATCGTT 58.909 34.615 0.00 0.00 45.39 3.85
3327 10158 7.911205 AGTAGAAAGACGACATAAGAAGAATCG 59.089 37.037 0.00 0.00 38.71 3.34
3328 10159 9.015577 CAGTAGAAAGACGACATAAGAAGAATC 57.984 37.037 0.00 0.00 0.00 2.52
3329 10160 7.489757 GCAGTAGAAAGACGACATAAGAAGAAT 59.510 37.037 0.00 0.00 0.00 2.40
3330 10161 6.807230 GCAGTAGAAAGACGACATAAGAAGAA 59.193 38.462 0.00 0.00 0.00 2.52
3331 10162 6.072119 TGCAGTAGAAAGACGACATAAGAAGA 60.072 38.462 0.00 0.00 0.00 2.87
3332 10163 6.093404 TGCAGTAGAAAGACGACATAAGAAG 58.907 40.000 0.00 0.00 0.00 2.85
3333 10164 6.020971 TGCAGTAGAAAGACGACATAAGAA 57.979 37.500 0.00 0.00 0.00 2.52
3334 10165 5.414765 TCTGCAGTAGAAAGACGACATAAGA 59.585 40.000 14.67 0.00 30.84 2.10
3335 10166 5.641709 TCTGCAGTAGAAAGACGACATAAG 58.358 41.667 14.67 0.00 30.84 1.73
3336 10167 5.414765 TCTCTGCAGTAGAAAGACGACATAA 59.585 40.000 14.67 0.00 34.32 1.90
3337 10168 4.941873 TCTCTGCAGTAGAAAGACGACATA 59.058 41.667 14.67 0.00 34.32 2.29
3338 10169 3.759086 TCTCTGCAGTAGAAAGACGACAT 59.241 43.478 14.67 0.00 34.32 3.06
3339 10170 3.146847 TCTCTGCAGTAGAAAGACGACA 58.853 45.455 14.67 0.00 34.32 4.35
3340 10171 3.189702 ACTCTCTGCAGTAGAAAGACGAC 59.810 47.826 20.74 0.00 34.32 4.34
3341 10172 3.413327 ACTCTCTGCAGTAGAAAGACGA 58.587 45.455 20.74 0.00 34.32 4.20
3342 10173 3.840890 ACTCTCTGCAGTAGAAAGACG 57.159 47.619 20.74 10.22 34.32 4.18
3343 10174 6.924060 TGTTTAACTCTCTGCAGTAGAAAGAC 59.076 38.462 20.74 14.16 34.32 3.01
3344 10175 7.050970 TGTTTAACTCTCTGCAGTAGAAAGA 57.949 36.000 20.74 12.43 34.32 2.52
3345 10176 7.715265 TTGTTTAACTCTCTGCAGTAGAAAG 57.285 36.000 20.74 9.02 34.32 2.62
3346 10177 8.500753 TTTTGTTTAACTCTCTGCAGTAGAAA 57.499 30.769 20.74 13.19 34.32 2.52
3347 10178 8.677148 ATTTTGTTTAACTCTCTGCAGTAGAA 57.323 30.769 20.74 9.14 34.32 2.10
3348 10179 9.772973 TTATTTTGTTTAACTCTCTGCAGTAGA 57.227 29.630 20.74 16.88 0.00 2.59
3350 10181 9.555727 ACTTATTTTGTTTAACTCTCTGCAGTA 57.444 29.630 14.67 2.31 0.00 2.74
3351 10182 8.451908 ACTTATTTTGTTTAACTCTCTGCAGT 57.548 30.769 14.67 0.00 0.00 4.40
3352 10183 9.736023 AAACTTATTTTGTTTAACTCTCTGCAG 57.264 29.630 7.63 7.63 36.07 4.41
3353 10184 9.515020 CAAACTTATTTTGTTTAACTCTCTGCA 57.485 29.630 0.00 0.00 39.96 4.41
3354 10185 9.730420 TCAAACTTATTTTGTTTAACTCTCTGC 57.270 29.630 0.00 0.00 44.47 4.26
3366 10197 9.476202 GGCTAAAGATTGTCAAACTTATTTTGT 57.524 29.630 8.36 0.00 44.47 2.83
3367 10198 9.696917 AGGCTAAAGATTGTCAAACTTATTTTG 57.303 29.630 8.36 0.00 45.38 2.44
3368 10199 9.914131 GAGGCTAAAGATTGTCAAACTTATTTT 57.086 29.630 8.36 0.00 0.00 1.82
3369 10200 8.237267 CGAGGCTAAAGATTGTCAAACTTATTT 58.763 33.333 8.36 0.00 0.00 1.40
3370 10201 7.606456 TCGAGGCTAAAGATTGTCAAACTTATT 59.394 33.333 8.36 0.00 0.00 1.40
3371 10202 7.103641 TCGAGGCTAAAGATTGTCAAACTTAT 58.896 34.615 8.36 3.07 0.00 1.73
3372 10203 6.460781 TCGAGGCTAAAGATTGTCAAACTTA 58.539 36.000 8.36 0.00 0.00 2.24
3373 10204 5.305585 TCGAGGCTAAAGATTGTCAAACTT 58.694 37.500 2.42 2.42 0.00 2.66
3374 10205 4.894784 TCGAGGCTAAAGATTGTCAAACT 58.105 39.130 0.00 0.00 0.00 2.66
3375 10206 4.436183 GCTCGAGGCTAAAGATTGTCAAAC 60.436 45.833 15.58 0.00 38.06 2.93
3376 10207 3.684788 GCTCGAGGCTAAAGATTGTCAAA 59.315 43.478 15.58 0.00 38.06 2.69
3377 10208 3.262420 GCTCGAGGCTAAAGATTGTCAA 58.738 45.455 15.58 0.00 38.06 3.18
3378 10209 2.893637 GCTCGAGGCTAAAGATTGTCA 58.106 47.619 15.58 0.00 38.06 3.58
3418 10249 9.965824 GAACATGATCTACCTTTTCTTTCAAAA 57.034 29.630 0.00 0.00 0.00 2.44
3419 10250 9.354673 AGAACATGATCTACCTTTTCTTTCAAA 57.645 29.630 3.25 0.00 0.00 2.69
3420 10251 8.924511 AGAACATGATCTACCTTTTCTTTCAA 57.075 30.769 3.25 0.00 0.00 2.69
3421 10252 9.436957 GTAGAACATGATCTACCTTTTCTTTCA 57.563 33.333 25.18 0.00 43.88 2.69
3433 10264 8.704668 TGAAAGCATAAGGTAGAACATGATCTA 58.295 33.333 8.52 8.52 0.00 1.98
3434 10265 7.568349 TGAAAGCATAAGGTAGAACATGATCT 58.432 34.615 10.62 10.62 0.00 2.75
3435 10266 7.792374 TGAAAGCATAAGGTAGAACATGATC 57.208 36.000 0.00 0.00 0.00 2.92
3436 10267 8.579850 TTTGAAAGCATAAGGTAGAACATGAT 57.420 30.769 0.00 0.00 0.00 2.45
3437 10268 7.994425 TTTGAAAGCATAAGGTAGAACATGA 57.006 32.000 0.00 0.00 0.00 3.07
3438 10269 8.081633 TGTTTTGAAAGCATAAGGTAGAACATG 58.918 33.333 0.00 0.00 0.00 3.21
3439 10270 8.177119 TGTTTTGAAAGCATAAGGTAGAACAT 57.823 30.769 0.00 0.00 0.00 2.71
3440 10271 7.255451 CCTGTTTTGAAAGCATAAGGTAGAACA 60.255 37.037 0.00 0.00 0.00 3.18
3441 10272 7.084486 CCTGTTTTGAAAGCATAAGGTAGAAC 58.916 38.462 0.00 0.00 0.00 3.01
3442 10273 6.294508 GCCTGTTTTGAAAGCATAAGGTAGAA 60.295 38.462 0.00 0.00 0.00 2.10
3443 10274 5.183140 GCCTGTTTTGAAAGCATAAGGTAGA 59.817 40.000 0.00 0.00 0.00 2.59
3444 10275 5.402398 GCCTGTTTTGAAAGCATAAGGTAG 58.598 41.667 0.00 0.00 0.00 3.18
3445 10276 4.219725 GGCCTGTTTTGAAAGCATAAGGTA 59.780 41.667 0.00 0.00 0.00 3.08
3446 10277 3.006859 GGCCTGTTTTGAAAGCATAAGGT 59.993 43.478 0.00 0.00 0.00 3.50
3447 10278 3.588955 GGCCTGTTTTGAAAGCATAAGG 58.411 45.455 0.00 0.00 0.00 2.69
3448 10279 3.244976 CGGCCTGTTTTGAAAGCATAAG 58.755 45.455 0.00 0.00 0.00 1.73
3449 10280 2.625790 ACGGCCTGTTTTGAAAGCATAA 59.374 40.909 0.00 0.00 0.00 1.90
3450 10281 2.235016 ACGGCCTGTTTTGAAAGCATA 58.765 42.857 0.00 0.00 0.00 3.14
3451 10282 1.039856 ACGGCCTGTTTTGAAAGCAT 58.960 45.000 0.00 0.00 0.00 3.79
3452 10283 1.606668 CTACGGCCTGTTTTGAAAGCA 59.393 47.619 0.00 0.00 0.00 3.91
3453 10284 1.666023 GCTACGGCCTGTTTTGAAAGC 60.666 52.381 0.00 1.83 0.00 3.51
3454 10285 2.331809 GCTACGGCCTGTTTTGAAAG 57.668 50.000 0.00 0.00 0.00 2.62
3466 10297 1.745489 CTTTCACCCAGGCTACGGC 60.745 63.158 0.00 0.00 37.82 5.68
3467 10298 0.391263 GACTTTCACCCAGGCTACGG 60.391 60.000 0.00 0.00 0.00 4.02
3468 10299 0.320374 TGACTTTCACCCAGGCTACG 59.680 55.000 0.00 0.00 0.00 3.51
3469 10300 2.789409 ATGACTTTCACCCAGGCTAC 57.211 50.000 0.00 0.00 0.00 3.58
3470 10301 3.806949 AAATGACTTTCACCCAGGCTA 57.193 42.857 0.00 0.00 0.00 3.93
3471 10302 2.683211 AAATGACTTTCACCCAGGCT 57.317 45.000 0.00 0.00 0.00 4.58
3472 10303 3.572255 TGTAAAATGACTTTCACCCAGGC 59.428 43.478 0.00 0.00 0.00 4.85
3473 10304 5.243730 ACATGTAAAATGACTTTCACCCAGG 59.756 40.000 0.00 0.00 0.00 4.45
3474 10305 6.331369 ACATGTAAAATGACTTTCACCCAG 57.669 37.500 0.00 0.00 0.00 4.45
3475 10306 6.432783 CCTACATGTAAAATGACTTTCACCCA 59.567 38.462 7.06 0.00 0.00 4.51
3476 10307 6.625081 GCCTACATGTAAAATGACTTTCACCC 60.625 42.308 7.06 0.00 0.00 4.61
3477 10308 6.322491 GCCTACATGTAAAATGACTTTCACC 58.678 40.000 7.06 0.00 0.00 4.02
3478 10309 6.021596 CGCCTACATGTAAAATGACTTTCAC 58.978 40.000 7.06 0.00 0.00 3.18
3479 10310 5.703592 ACGCCTACATGTAAAATGACTTTCA 59.296 36.000 7.06 0.00 0.00 2.69
3480 10311 6.178239 ACGCCTACATGTAAAATGACTTTC 57.822 37.500 7.06 0.00 0.00 2.62
3481 10312 6.430000 AGAACGCCTACATGTAAAATGACTTT 59.570 34.615 7.06 0.00 0.00 2.66
3482 10313 5.938125 AGAACGCCTACATGTAAAATGACTT 59.062 36.000 7.06 0.00 0.00 3.01
3483 10314 5.488341 AGAACGCCTACATGTAAAATGACT 58.512 37.500 7.06 0.93 0.00 3.41
3484 10315 5.796350 AGAACGCCTACATGTAAAATGAC 57.204 39.130 7.06 0.00 0.00 3.06
3485 10316 7.269316 TGATAGAACGCCTACATGTAAAATGA 58.731 34.615 7.06 0.00 0.00 2.57
3486 10317 7.477144 TGATAGAACGCCTACATGTAAAATG 57.523 36.000 7.06 0.24 0.00 2.32
3487 10318 6.202954 GCTGATAGAACGCCTACATGTAAAAT 59.797 38.462 7.06 0.00 0.00 1.82
3488 10319 5.522460 GCTGATAGAACGCCTACATGTAAAA 59.478 40.000 7.06 0.00 0.00 1.52
3489 10320 5.047847 GCTGATAGAACGCCTACATGTAAA 58.952 41.667 7.06 0.00 0.00 2.01
3490 10321 4.500887 GGCTGATAGAACGCCTACATGTAA 60.501 45.833 7.06 0.00 40.62 2.41
3491 10322 3.005472 GGCTGATAGAACGCCTACATGTA 59.995 47.826 5.25 5.25 40.62 2.29
3492 10323 2.224066 GGCTGATAGAACGCCTACATGT 60.224 50.000 2.69 2.69 40.62 3.21
3493 10324 2.408050 GGCTGATAGAACGCCTACATG 58.592 52.381 0.00 0.00 40.62 3.21
3494 10325 1.344763 GGGCTGATAGAACGCCTACAT 59.655 52.381 0.00 0.00 43.29 2.29
3495 10326 0.750850 GGGCTGATAGAACGCCTACA 59.249 55.000 0.00 0.00 43.29 2.74
3496 10327 0.750850 TGGGCTGATAGAACGCCTAC 59.249 55.000 0.00 0.00 43.29 3.18
3497 10328 1.412710 CTTGGGCTGATAGAACGCCTA 59.587 52.381 0.00 0.00 43.29 3.93
3498 10329 0.179000 CTTGGGCTGATAGAACGCCT 59.821 55.000 0.00 0.00 43.29 5.52
3499 10330 0.178068 TCTTGGGCTGATAGAACGCC 59.822 55.000 0.00 0.00 43.03 5.68
3500 10331 1.936547 CTTCTTGGGCTGATAGAACGC 59.063 52.381 0.00 0.00 0.00 4.84
3501 10332 3.526931 TCTTCTTGGGCTGATAGAACG 57.473 47.619 0.00 0.00 0.00 3.95
3502 10333 6.220201 GTCTATCTTCTTGGGCTGATAGAAC 58.780 44.000 11.55 5.12 44.77 3.01
3503 10334 5.010112 CGTCTATCTTCTTGGGCTGATAGAA 59.990 44.000 11.55 0.00 44.77 2.10
3504 10335 4.520874 CGTCTATCTTCTTGGGCTGATAGA 59.479 45.833 0.00 0.00 42.62 1.98
3505 10336 4.279671 ACGTCTATCTTCTTGGGCTGATAG 59.720 45.833 0.00 0.00 39.53 2.08
3506 10337 4.215908 ACGTCTATCTTCTTGGGCTGATA 58.784 43.478 0.00 0.00 0.00 2.15
3507 10338 3.034635 ACGTCTATCTTCTTGGGCTGAT 58.965 45.455 0.00 0.00 0.00 2.90
3508 10339 2.457598 ACGTCTATCTTCTTGGGCTGA 58.542 47.619 0.00 0.00 0.00 4.26
3509 10340 2.969628 ACGTCTATCTTCTTGGGCTG 57.030 50.000 0.00 0.00 0.00 4.85
3510 10341 2.168728 GGAACGTCTATCTTCTTGGGCT 59.831 50.000 0.00 0.00 0.00 5.19
3511 10342 2.552031 GGAACGTCTATCTTCTTGGGC 58.448 52.381 0.00 0.00 0.00 5.36
3512 10343 2.766828 AGGGAACGTCTATCTTCTTGGG 59.233 50.000 0.00 0.00 0.00 4.12
3513 10344 3.447586 TCAGGGAACGTCTATCTTCTTGG 59.552 47.826 0.00 0.00 0.00 3.61
3514 10345 4.082190 TGTCAGGGAACGTCTATCTTCTTG 60.082 45.833 0.00 0.00 0.00 3.02
3515 10346 4.087182 TGTCAGGGAACGTCTATCTTCTT 58.913 43.478 0.00 0.00 0.00 2.52
3516 10347 3.698289 TGTCAGGGAACGTCTATCTTCT 58.302 45.455 0.00 0.00 0.00 2.85
3517 10348 4.657436 ATGTCAGGGAACGTCTATCTTC 57.343 45.455 0.00 0.00 0.00 2.87
3518 10349 5.420409 GAAATGTCAGGGAACGTCTATCTT 58.580 41.667 0.00 0.00 0.00 2.40
3519 10350 4.141914 GGAAATGTCAGGGAACGTCTATCT 60.142 45.833 0.00 0.00 0.00 1.98
3520 10351 4.120589 GGAAATGTCAGGGAACGTCTATC 58.879 47.826 0.00 0.00 0.00 2.08
3521 10352 3.118371 GGGAAATGTCAGGGAACGTCTAT 60.118 47.826 0.00 0.00 0.00 1.98
3522 10353 2.235402 GGGAAATGTCAGGGAACGTCTA 59.765 50.000 0.00 0.00 0.00 2.59
3523 10354 1.003233 GGGAAATGTCAGGGAACGTCT 59.997 52.381 0.00 0.00 0.00 4.18
3524 10355 1.003233 AGGGAAATGTCAGGGAACGTC 59.997 52.381 0.00 0.00 0.00 4.34
3525 10356 1.003233 GAGGGAAATGTCAGGGAACGT 59.997 52.381 0.00 0.00 0.00 3.99
3526 10357 1.739067 GAGGGAAATGTCAGGGAACG 58.261 55.000 0.00 0.00 0.00 3.95
3527 10358 1.679032 CCGAGGGAAATGTCAGGGAAC 60.679 57.143 0.00 0.00 0.00 3.62
3528 10359 0.618458 CCGAGGGAAATGTCAGGGAA 59.382 55.000 0.00 0.00 0.00 3.97
3529 10360 1.271840 CCCGAGGGAAATGTCAGGGA 61.272 60.000 0.84 0.00 39.71 4.20
3530 10361 1.224592 CCCGAGGGAAATGTCAGGG 59.775 63.158 0.84 0.00 37.50 4.45
3531 10362 0.392998 CACCCGAGGGAAATGTCAGG 60.393 60.000 16.26 0.00 38.96 3.86
3532 10363 1.026718 GCACCCGAGGGAAATGTCAG 61.027 60.000 16.26 0.00 38.96 3.51
3533 10364 1.002624 GCACCCGAGGGAAATGTCA 60.003 57.895 16.26 0.00 38.96 3.58
3534 10365 0.322546 AAGCACCCGAGGGAAATGTC 60.323 55.000 16.26 0.13 38.96 3.06
3535 10366 0.609131 CAAGCACCCGAGGGAAATGT 60.609 55.000 16.26 0.00 38.96 2.71
3536 10367 1.937546 GCAAGCACCCGAGGGAAATG 61.938 60.000 16.26 3.96 38.96 2.32
3537 10368 1.678970 GCAAGCACCCGAGGGAAAT 60.679 57.895 16.26 0.00 38.96 2.17
3538 10369 2.282180 GCAAGCACCCGAGGGAAA 60.282 61.111 16.26 0.00 38.96 3.13
3539 10370 3.551496 CTGCAAGCACCCGAGGGAA 62.551 63.158 16.26 0.00 38.96 3.97
3540 10371 4.020617 CTGCAAGCACCCGAGGGA 62.021 66.667 16.26 0.00 38.96 4.20
3541 10372 4.335647 ACTGCAAGCACCCGAGGG 62.336 66.667 6.63 6.63 37.60 4.30
3542 10373 2.743928 GACTGCAAGCACCCGAGG 60.744 66.667 0.00 0.00 37.60 4.63
3543 10374 1.739562 GAGACTGCAAGCACCCGAG 60.740 63.158 0.00 0.00 37.60 4.63
3544 10375 2.343758 GAGACTGCAAGCACCCGA 59.656 61.111 0.00 0.00 37.60 5.14
3545 10376 2.743928 GGAGACTGCAAGCACCCG 60.744 66.667 0.00 0.00 37.60 5.28
3546 10377 2.167398 TACGGAGACTGCAAGCACCC 62.167 60.000 0.00 0.00 37.60 4.61
3547 10378 0.737715 CTACGGAGACTGCAAGCACC 60.738 60.000 0.00 0.00 37.60 5.01
3548 10379 1.355066 GCTACGGAGACTGCAAGCAC 61.355 60.000 0.00 0.00 37.60 4.40
3549 10380 1.079819 GCTACGGAGACTGCAAGCA 60.080 57.895 0.00 0.00 37.60 3.91
3550 10381 0.390472 AAGCTACGGAGACTGCAAGC 60.390 55.000 0.00 9.50 37.60 4.01
3551 10382 1.067565 TCAAGCTACGGAGACTGCAAG 60.068 52.381 0.00 0.00 42.29 4.01
3552 10383 0.966179 TCAAGCTACGGAGACTGCAA 59.034 50.000 0.00 0.00 0.00 4.08
3553 10384 1.135139 GATCAAGCTACGGAGACTGCA 59.865 52.381 0.00 0.00 0.00 4.41
3554 10385 1.135139 TGATCAAGCTACGGAGACTGC 59.865 52.381 0.00 0.00 0.00 4.40
3555 10386 2.223688 CCTGATCAAGCTACGGAGACTG 60.224 54.545 0.00 0.00 0.00 3.51
3556 10387 2.028130 CCTGATCAAGCTACGGAGACT 58.972 52.381 0.00 0.00 0.00 3.24
3557 10388 1.751924 ACCTGATCAAGCTACGGAGAC 59.248 52.381 0.00 0.00 0.00 3.36
3558 10389 2.025155 GACCTGATCAAGCTACGGAGA 58.975 52.381 0.00 0.00 0.00 3.71
3559 10390 1.268794 CGACCTGATCAAGCTACGGAG 60.269 57.143 0.00 0.00 0.00 4.63
3560 10391 0.738975 CGACCTGATCAAGCTACGGA 59.261 55.000 0.00 0.00 0.00 4.69
3561 10392 0.249073 CCGACCTGATCAAGCTACGG 60.249 60.000 0.00 4.00 0.00 4.02
3562 10393 0.872021 GCCGACCTGATCAAGCTACG 60.872 60.000 0.00 0.00 0.00 3.51
3563 10394 0.175760 TGCCGACCTGATCAAGCTAC 59.824 55.000 0.00 0.00 0.00 3.58
3564 10395 0.901827 TTGCCGACCTGATCAAGCTA 59.098 50.000 0.00 0.00 0.00 3.32
3565 10396 0.674895 GTTGCCGACCTGATCAAGCT 60.675 55.000 0.00 0.00 0.00 3.74
3566 10397 1.648467 GGTTGCCGACCTGATCAAGC 61.648 60.000 0.00 0.00 45.55 4.01
3567 10398 2.471255 GGTTGCCGACCTGATCAAG 58.529 57.895 0.00 0.00 45.55 3.02
3568 10399 4.713946 GGTTGCCGACCTGATCAA 57.286 55.556 0.00 0.00 45.55 2.57
3576 10407 0.033504 TTCTCACTGAGGTTGCCGAC 59.966 55.000 6.20 0.00 0.00 4.79
3577 10408 0.976641 ATTCTCACTGAGGTTGCCGA 59.023 50.000 6.20 0.00 0.00 5.54
3578 10409 1.363744 GATTCTCACTGAGGTTGCCG 58.636 55.000 6.20 0.00 0.00 5.69
3579 10410 1.280421 AGGATTCTCACTGAGGTTGCC 59.720 52.381 6.20 3.71 0.00 4.52
3580 10411 2.626840 GAGGATTCTCACTGAGGTTGC 58.373 52.381 6.20 0.21 39.74 4.17
3581 10412 2.093235 GGGAGGATTCTCACTGAGGTTG 60.093 54.545 2.72 0.00 40.23 3.77
3582 10413 2.192263 GGGAGGATTCTCACTGAGGTT 58.808 52.381 2.72 0.00 40.23 3.50
3583 10414 1.079490 TGGGAGGATTCTCACTGAGGT 59.921 52.381 4.50 0.00 43.67 3.85
3584 10415 1.761784 CTGGGAGGATTCTCACTGAGG 59.238 57.143 4.50 0.00 43.67 3.86
3585 10416 1.138661 GCTGGGAGGATTCTCACTGAG 59.861 57.143 14.11 0.17 43.67 3.35
3586 10417 1.198713 GCTGGGAGGATTCTCACTGA 58.801 55.000 14.11 0.00 43.67 3.41
3587 10418 1.134461 CAGCTGGGAGGATTCTCACTG 60.134 57.143 5.57 5.19 43.67 3.66
3588 10419 1.202330 CAGCTGGGAGGATTCTCACT 58.798 55.000 5.57 0.00 43.67 3.41
3589 10420 0.908198 ACAGCTGGGAGGATTCTCAC 59.092 55.000 19.93 0.00 43.59 3.51
3590 10421 1.198713 GACAGCTGGGAGGATTCTCA 58.801 55.000 19.93 0.00 41.69 3.27
3591 10422 0.467804 GGACAGCTGGGAGGATTCTC 59.532 60.000 19.93 2.47 39.25 2.87
3592 10423 0.252881 TGGACAGCTGGGAGGATTCT 60.253 55.000 19.93 0.00 0.00 2.40
3593 10424 0.620556 TTGGACAGCTGGGAGGATTC 59.379 55.000 19.93 4.06 0.00 2.52
3594 10425 0.329596 GTTGGACAGCTGGGAGGATT 59.670 55.000 19.93 0.00 0.00 3.01
3595 10426 0.842030 TGTTGGACAGCTGGGAGGAT 60.842 55.000 19.93 0.00 0.00 3.24
3596 10427 1.461268 TGTTGGACAGCTGGGAGGA 60.461 57.895 19.93 0.00 0.00 3.71
3597 10428 1.302832 GTGTTGGACAGCTGGGAGG 60.303 63.158 19.93 0.00 0.00 4.30
3598 10429 0.109342 AAGTGTTGGACAGCTGGGAG 59.891 55.000 19.93 0.00 0.00 4.30
3599 10430 0.179020 CAAGTGTTGGACAGCTGGGA 60.179 55.000 19.93 0.00 0.00 4.37
3600 10431 0.466189 ACAAGTGTTGGACAGCTGGG 60.466 55.000 19.93 0.00 34.12 4.45
3601 10432 1.392589 AACAAGTGTTGGACAGCTGG 58.607 50.000 19.93 0.00 36.80 4.85
3602 10433 3.814842 TCATAACAAGTGTTGGACAGCTG 59.185 43.478 13.48 13.48 38.90 4.24
3603 10434 4.085357 TCATAACAAGTGTTGGACAGCT 57.915 40.909 6.94 0.00 38.90 4.24
3604 10435 4.829064 TTCATAACAAGTGTTGGACAGC 57.171 40.909 6.94 0.00 38.90 4.40
3605 10436 7.257722 AGTTTTTCATAACAAGTGTTGGACAG 58.742 34.615 6.94 0.00 38.90 3.51
3606 10437 7.164230 AGTTTTTCATAACAAGTGTTGGACA 57.836 32.000 6.94 0.00 38.90 4.02
3607 10438 7.464045 GCAAGTTTTTCATAACAAGTGTTGGAC 60.464 37.037 6.94 0.00 38.90 4.02
3608 10439 6.533367 GCAAGTTTTTCATAACAAGTGTTGGA 59.467 34.615 6.94 2.18 38.90 3.53
3609 10440 6.534793 AGCAAGTTTTTCATAACAAGTGTTGG 59.465 34.615 6.94 0.00 38.90 3.77
3610 10441 7.513505 CGAGCAAGTTTTTCATAACAAGTGTTG 60.514 37.037 6.94 0.00 38.90 3.33
3611 10442 6.472163 CGAGCAAGTTTTTCATAACAAGTGTT 59.528 34.615 1.75 1.75 41.73 3.32
3612 10443 5.971202 CGAGCAAGTTTTTCATAACAAGTGT 59.029 36.000 0.00 0.00 0.00 3.55
3613 10444 5.971202 ACGAGCAAGTTTTTCATAACAAGTG 59.029 36.000 0.00 0.00 0.00 3.16
3614 10445 6.131544 ACGAGCAAGTTTTTCATAACAAGT 57.868 33.333 0.00 0.00 0.00 3.16
3615 10446 6.142320 GGAACGAGCAAGTTTTTCATAACAAG 59.858 38.462 0.00 0.00 34.00 3.16
3616 10447 5.974751 GGAACGAGCAAGTTTTTCATAACAA 59.025 36.000 0.00 0.00 34.00 2.83
3617 10448 5.516090 GGAACGAGCAAGTTTTTCATAACA 58.484 37.500 0.00 0.00 34.00 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.