Multiple sequence alignment - TraesCS2B01G103800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G103800 chr2B 100.000 3683 0 0 1 3683 64765554 64761872 0.000000e+00 6802.0
1 TraesCS2B01G103800 chr2B 100.000 871 0 0 4200 5070 64761355 64760485 0.000000e+00 1609.0
2 TraesCS2B01G103800 chr2B 100.000 758 0 0 5126 5883 64760429 64759672 0.000000e+00 1400.0
3 TraesCS2B01G103800 chr2B 89.695 951 97 1 2674 3624 23564553 23565502 0.000000e+00 1212.0
4 TraesCS2B01G103800 chr2B 89.208 732 52 8 5155 5883 757346189 757345482 0.000000e+00 889.0
5 TraesCS2B01G103800 chr2B 96.008 476 19 0 4200 4675 63821827 63822302 0.000000e+00 774.0
6 TraesCS2B01G103800 chr2B 89.210 519 38 4 836 1350 63820319 63820823 2.990000e-177 632.0
7 TraesCS2B01G103800 chr2B 85.150 532 38 20 1365 1890 63821174 63821670 1.890000e-139 507.0
8 TraesCS2B01G103800 chr2B 90.286 350 34 0 997 1346 63849341 63849690 5.370000e-125 459.0
9 TraesCS2B01G103800 chr2B 88.451 381 40 2 962 1342 64212644 64212268 1.930000e-124 457.0
10 TraesCS2B01G103800 chr2B 82.863 531 63 12 843 1367 63840021 63840529 8.990000e-123 451.0
11 TraesCS2B01G103800 chr2B 83.750 480 64 9 4361 4836 64070431 64070900 5.410000e-120 442.0
12 TraesCS2B01G103800 chr2B 82.922 486 64 12 4361 4836 63855032 63855508 2.540000e-113 420.0
13 TraesCS2B01G103800 chr2B 82.413 489 67 12 4361 4839 64206765 64206286 5.490000e-110 409.0
14 TraesCS2B01G103800 chr2B 81.964 499 75 9 4340 4836 64230256 64229771 5.490000e-110 409.0
15 TraesCS2B01G103800 chr2B 91.875 160 8 3 4677 4836 63827943 63828097 9.930000e-53 219.0
16 TraesCS2B01G103800 chr2B 95.402 87 3 1 27 112 63812891 63812977 2.860000e-28 137.0
17 TraesCS2B01G103800 chr2B 94.231 52 3 0 103 154 63820261 63820312 4.890000e-11 80.5
18 TraesCS2B01G103800 chr4A 87.673 1663 187 12 1967 3620 162429274 162427621 0.000000e+00 1919.0
19 TraesCS2B01G103800 chr4A 91.459 761 42 9 5126 5883 731103409 731104149 0.000000e+00 1024.0
20 TraesCS2B01G103800 chr4A 91.188 749 39 10 5138 5883 644531579 644530855 0.000000e+00 992.0
21 TraesCS2B01G103800 chr4A 88.699 761 45 23 5126 5883 709281136 709281858 0.000000e+00 891.0
22 TraesCS2B01G103800 chr4A 88.173 761 45 22 5126 5883 709428783 709429501 0.000000e+00 865.0
23 TraesCS2B01G103800 chr4A 85.837 233 33 0 4838 5070 662851290 662851522 1.270000e-61 248.0
24 TraesCS2B01G103800 chr4A 85.253 217 32 0 4854 5070 703109512 703109296 2.130000e-54 224.0
25 TraesCS2B01G103800 chr4A 85.000 220 31 2 4843 5061 673207896 673207678 7.670000e-54 222.0
26 TraesCS2B01G103800 chr4A 77.374 358 65 16 3263 3612 738878367 738878018 1.290000e-46 198.0
27 TraesCS2B01G103800 chr4A 82.051 234 35 7 4837 5067 713592622 713592851 6.020000e-45 193.0
28 TraesCS2B01G103800 chr1A 87.906 1538 182 4 1964 3499 573918563 573920098 0.000000e+00 1807.0
29 TraesCS2B01G103800 chr1A 83.003 1665 265 13 1964 3624 491308448 491310098 0.000000e+00 1491.0
30 TraesCS2B01G103800 chr1A 85.185 756 79 13 5130 5883 546581741 546581017 0.000000e+00 745.0
31 TraesCS2B01G103800 chr1A 89.888 267 23 4 3360 3625 50616043 50615780 2.030000e-89 340.0
32 TraesCS2B01G103800 chr2A 86.136 1659 222 5 1972 3624 46102568 46100912 0.000000e+00 1783.0
33 TraesCS2B01G103800 chr2A 95.581 611 16 3 4232 4836 41654428 41653823 0.000000e+00 968.0
34 TraesCS2B01G103800 chr2A 86.743 611 54 13 1365 1969 41655030 41654441 0.000000e+00 654.0
35 TraesCS2B01G103800 chr2A 88.448 554 27 12 815 1368 41655582 41655066 8.320000e-178 634.0
36 TraesCS2B01G103800 chr2A 82.004 489 69 12 4361 4839 41644190 41643711 1.190000e-106 398.0
37 TraesCS2B01G103800 chr2A 92.500 160 12 0 1187 1346 41649838 41649679 4.590000e-56 230.0
38 TraesCS2B01G103800 chr2A 95.238 63 3 0 92 154 41655640 41655578 3.750000e-17 100.0
39 TraesCS2B01G103800 chr7D 82.890 1654 274 8 1972 3620 408467791 408469440 0.000000e+00 1478.0
40 TraesCS2B01G103800 chr7D 86.580 231 29 2 4837 5066 108370051 108369822 2.720000e-63 254.0
41 TraesCS2B01G103800 chr7D 83.643 269 44 0 997 1265 171322222 171321954 2.720000e-63 254.0
42 TraesCS2B01G103800 chr7D 86.147 231 30 2 4837 5066 108348381 108348152 1.270000e-61 248.0
43 TraesCS2B01G103800 chr3A 87.522 1122 137 2 2501 3620 711282123 711283243 0.000000e+00 1293.0
44 TraesCS2B01G103800 chr3A 89.649 541 54 2 1964 2503 711265675 711266214 0.000000e+00 688.0
45 TraesCS2B01G103800 chr6B 92.116 761 44 10 5126 5883 684534521 684535268 0.000000e+00 1059.0
46 TraesCS2B01G103800 chr6B 91.953 758 43 11 5129 5883 684516075 684516817 0.000000e+00 1046.0
47 TraesCS2B01G103800 chr6B 90.483 725 42 7 5162 5883 65710071 65709371 0.000000e+00 931.0
48 TraesCS2B01G103800 chr6B 94.184 533 28 3 5164 5694 106520169 106520700 0.000000e+00 809.0
49 TraesCS2B01G103800 chr6B 72.166 1685 410 49 1971 3620 26394644 26396304 5.370000e-125 459.0
50 TraesCS2B01G103800 chr6B 87.660 235 29 0 4836 5070 13712691 13712925 2.090000e-69 274.0
51 TraesCS2B01G103800 chr6B 86.809 235 31 0 4836 5070 13730102 13730336 4.520000e-66 263.0
52 TraesCS2B01G103800 chr6B 78.165 316 55 9 158 462 98611322 98611634 7.780000e-44 189.0
53 TraesCS2B01G103800 chr6B 77.532 316 57 12 158 462 98523805 98524117 1.680000e-40 178.0
54 TraesCS2B01G103800 chr3B 92.450 755 35 9 5132 5883 721568989 721568254 0.000000e+00 1059.0
55 TraesCS2B01G103800 chr3B 93.525 556 33 3 5129 5682 742269500 742268946 0.000000e+00 824.0
56 TraesCS2B01G103800 chr3B 87.288 236 27 3 4837 5070 60015821 60015587 3.500000e-67 267.0
57 TraesCS2B01G103800 chr3B 87.069 232 28 2 4840 5070 819776948 819776718 1.630000e-65 261.0
58 TraesCS2B01G103800 chr5B 91.953 758 44 7 5129 5883 669420864 669420121 0.000000e+00 1046.0
59 TraesCS2B01G103800 chr5B 87.069 232 30 0 4837 5068 712045213 712044982 4.520000e-66 263.0
60 TraesCS2B01G103800 chr5B 85.922 206 27 2 4862 5066 509682444 509682240 9.930000e-53 219.0
61 TraesCS2B01G103800 chr2D 94.844 640 25 4 4200 4836 37045956 37045322 0.000000e+00 992.0
62 TraesCS2B01G103800 chr2D 84.199 943 86 36 845 1747 37047022 37046103 0.000000e+00 857.0
63 TraesCS2B01G103800 chr2D 83.810 525 63 12 843 1367 37041301 37040799 4.120000e-131 479.0
64 TraesCS2B01G103800 chr2D 84.848 495 51 18 845 1335 37028302 37027828 1.480000e-130 477.0
65 TraesCS2B01G103800 chr2D 81.886 403 61 7 4437 4836 37031315 37030922 4.400000e-86 329.0
66 TraesCS2B01G103800 chr2D 85.106 94 9 4 4340 4433 37037577 37037489 2.260000e-14 91.6
67 TraesCS2B01G103800 chr1D 90.339 766 37 16 5129 5883 265517307 265516568 0.000000e+00 970.0
68 TraesCS2B01G103800 chr1D 86.770 582 54 11 5129 5707 24253546 24252985 1.390000e-175 627.0
69 TraesCS2B01G103800 chr1D 83.475 236 31 5 4837 5070 477513972 477514201 4.620000e-51 213.0
70 TraesCS2B01G103800 chr1D 80.786 229 42 2 4836 5063 26430167 26430394 1.680000e-40 178.0
71 TraesCS2B01G103800 chr1D 85.915 142 18 2 4837 4977 2503278 2503138 3.670000e-32 150.0
72 TraesCS2B01G103800 chr5D 91.242 628 34 10 5263 5883 555998172 555997559 0.000000e+00 835.0
73 TraesCS2B01G103800 chr5D 86.900 229 30 0 4836 5064 423758236 423758464 2.100000e-64 257.0
74 TraesCS2B01G103800 chr5D 85.043 234 21 1 4837 5070 12112310 12112529 5.930000e-55 226.0
75 TraesCS2B01G103800 chr5D 81.304 230 37 6 4837 5063 437028840 437029066 1.300000e-41 182.0
76 TraesCS2B01G103800 chr4B 92.321 573 35 5 5126 5696 659964702 659964137 0.000000e+00 806.0
77 TraesCS2B01G103800 chr4B 81.034 232 39 5 4837 5066 50265384 50265612 4.680000e-41 180.0
78 TraesCS2B01G103800 chr4B 95.349 43 1 1 5005 5046 653505994 653505952 3.800000e-07 67.6
79 TraesCS2B01G103800 chr1B 86.316 760 60 19 5126 5883 427575062 427574345 0.000000e+00 787.0
80 TraesCS2B01G103800 chr1B 92.939 524 28 8 5360 5881 509188492 509187976 0.000000e+00 754.0
81 TraesCS2B01G103800 chr1B 86.637 681 64 19 158 814 635931354 635932031 0.000000e+00 728.0
82 TraesCS2B01G103800 chr1B 82.979 235 39 1 4832 5066 550911608 550911375 1.660000e-50 211.0
83 TraesCS2B01G103800 chr6D 81.617 903 157 8 2726 3624 20785890 20784993 0.000000e+00 739.0
84 TraesCS2B01G103800 chr6D 82.547 212 33 1 4860 5067 387878900 387878689 3.620000e-42 183.0
85 TraesCS2B01G103800 chr6D 71.891 402 106 7 3222 3620 346562000 346562397 6.230000e-20 110.0
86 TraesCS2B01G103800 chr6D 79.195 149 25 5 4837 4983 445164715 445164571 1.350000e-16 99.0
87 TraesCS2B01G103800 chr7B 92.512 414 29 2 158 569 720224816 720225229 5.080000e-165 592.0
88 TraesCS2B01G103800 chr7B 91.473 258 11 2 5627 5883 13275108 13275355 1.570000e-90 344.0
89 TraesCS2B01G103800 chr7B 85.130 269 40 0 997 1265 137802144 137801876 5.810000e-70 276.0
90 TraesCS2B01G103800 chr7B 89.333 150 11 4 665 814 720239494 720239638 3.620000e-42 183.0
91 TraesCS2B01G103800 chr7B 91.818 110 7 1 560 667 720239348 720239457 1.020000e-32 152.0
92 TraesCS2B01G103800 chrUn 70.702 1454 367 54 2204 3625 355030909 355029483 2.700000e-68 270.0
93 TraesCS2B01G103800 chrUn 87.166 187 22 2 4881 5066 93446988 93446803 1.660000e-50 211.0
94 TraesCS2B01G103800 chrUn 80.383 209 37 4 4837 5043 92798478 92798272 7.890000e-34 156.0
95 TraesCS2B01G103800 chrUn 79.866 149 28 2 4836 4983 289493653 289493800 2.240000e-19 108.0
96 TraesCS2B01G103800 chrUn 79.866 149 28 2 4836 4983 446354792 446354645 2.240000e-19 108.0
97 TraesCS2B01G103800 chrUn 79.866 149 28 2 4836 4983 446355941 446355794 2.240000e-19 108.0
98 TraesCS2B01G103800 chrUn 79.866 149 28 2 4836 4983 463564150 463564003 2.240000e-19 108.0
99 TraesCS2B01G103800 chrUn 94.286 35 1 1 4873 4907 26779904 26779937 1.100000e-02 52.8
100 TraesCS2B01G103800 chr7A 82.528 269 47 0 997 1265 174216780 174216512 2.740000e-58 237.0
101 TraesCS2B01G103800 chr3D 79.535 215 40 4 4837 5049 7745219 7745007 3.670000e-32 150.0
102 TraesCS2B01G103800 chr6A 91.304 69 4 2 4838 4905 617229008 617228941 6.280000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G103800 chr2B 64759672 64765554 5882 True 3270.333333 6802 100.00000 1 5883 3 chr2B.!!$R5 5882
1 TraesCS2B01G103800 chr2B 23564553 23565502 949 False 1212.000000 1212 89.69500 2674 3624 1 chr2B.!!$F1 950
2 TraesCS2B01G103800 chr2B 757345482 757346189 707 True 889.000000 889 89.20800 5155 5883 1 chr2B.!!$R4 728
3 TraesCS2B01G103800 chr2B 63820261 63822302 2041 False 498.375000 774 91.14975 103 4675 4 chr2B.!!$F8 4572
4 TraesCS2B01G103800 chr2B 63840021 63840529 508 False 451.000000 451 82.86300 843 1367 1 chr2B.!!$F4 524
5 TraesCS2B01G103800 chr4A 162427621 162429274 1653 True 1919.000000 1919 87.67300 1967 3620 1 chr4A.!!$R1 1653
6 TraesCS2B01G103800 chr4A 731103409 731104149 740 False 1024.000000 1024 91.45900 5126 5883 1 chr4A.!!$F5 757
7 TraesCS2B01G103800 chr4A 644530855 644531579 724 True 992.000000 992 91.18800 5138 5883 1 chr4A.!!$R2 745
8 TraesCS2B01G103800 chr4A 709281136 709281858 722 False 891.000000 891 88.69900 5126 5883 1 chr4A.!!$F2 757
9 TraesCS2B01G103800 chr4A 709428783 709429501 718 False 865.000000 865 88.17300 5126 5883 1 chr4A.!!$F3 757
10 TraesCS2B01G103800 chr1A 573918563 573920098 1535 False 1807.000000 1807 87.90600 1964 3499 1 chr1A.!!$F2 1535
11 TraesCS2B01G103800 chr1A 491308448 491310098 1650 False 1491.000000 1491 83.00300 1964 3624 1 chr1A.!!$F1 1660
12 TraesCS2B01G103800 chr1A 546581017 546581741 724 True 745.000000 745 85.18500 5130 5883 1 chr1A.!!$R2 753
13 TraesCS2B01G103800 chr2A 46100912 46102568 1656 True 1783.000000 1783 86.13600 1972 3624 1 chr2A.!!$R2 1652
14 TraesCS2B01G103800 chr2A 41649679 41655640 5961 True 517.200000 968 91.70200 92 4836 5 chr2A.!!$R3 4744
15 TraesCS2B01G103800 chr7D 408467791 408469440 1649 False 1478.000000 1478 82.89000 1972 3620 1 chr7D.!!$F1 1648
16 TraesCS2B01G103800 chr3A 711282123 711283243 1120 False 1293.000000 1293 87.52200 2501 3620 1 chr3A.!!$F2 1119
17 TraesCS2B01G103800 chr3A 711265675 711266214 539 False 688.000000 688 89.64900 1964 2503 1 chr3A.!!$F1 539
18 TraesCS2B01G103800 chr6B 684534521 684535268 747 False 1059.000000 1059 92.11600 5126 5883 1 chr6B.!!$F8 757
19 TraesCS2B01G103800 chr6B 684516075 684516817 742 False 1046.000000 1046 91.95300 5129 5883 1 chr6B.!!$F7 754
20 TraesCS2B01G103800 chr6B 65709371 65710071 700 True 931.000000 931 90.48300 5162 5883 1 chr6B.!!$R1 721
21 TraesCS2B01G103800 chr6B 106520169 106520700 531 False 809.000000 809 94.18400 5164 5694 1 chr6B.!!$F6 530
22 TraesCS2B01G103800 chr6B 26394644 26396304 1660 False 459.000000 459 72.16600 1971 3620 1 chr6B.!!$F3 1649
23 TraesCS2B01G103800 chr3B 721568254 721568989 735 True 1059.000000 1059 92.45000 5132 5883 1 chr3B.!!$R2 751
24 TraesCS2B01G103800 chr3B 742268946 742269500 554 True 824.000000 824 93.52500 5129 5682 1 chr3B.!!$R3 553
25 TraesCS2B01G103800 chr5B 669420121 669420864 743 True 1046.000000 1046 91.95300 5129 5883 1 chr5B.!!$R2 754
26 TraesCS2B01G103800 chr2D 37045322 37047022 1700 True 924.500000 992 89.52150 845 4836 2 chr2D.!!$R3 3991
27 TraesCS2B01G103800 chr2D 37027828 37031315 3487 True 403.000000 477 83.36700 845 4836 2 chr2D.!!$R1 3991
28 TraesCS2B01G103800 chr2D 37037489 37041301 3812 True 285.300000 479 84.45800 843 4433 2 chr2D.!!$R2 3590
29 TraesCS2B01G103800 chr1D 265516568 265517307 739 True 970.000000 970 90.33900 5129 5883 1 chr1D.!!$R3 754
30 TraesCS2B01G103800 chr1D 24252985 24253546 561 True 627.000000 627 86.77000 5129 5707 1 chr1D.!!$R2 578
31 TraesCS2B01G103800 chr5D 555997559 555998172 613 True 835.000000 835 91.24200 5263 5883 1 chr5D.!!$R1 620
32 TraesCS2B01G103800 chr4B 659964137 659964702 565 True 806.000000 806 92.32100 5126 5696 1 chr4B.!!$R2 570
33 TraesCS2B01G103800 chr1B 427574345 427575062 717 True 787.000000 787 86.31600 5126 5883 1 chr1B.!!$R1 757
34 TraesCS2B01G103800 chr1B 509187976 509188492 516 True 754.000000 754 92.93900 5360 5881 1 chr1B.!!$R2 521
35 TraesCS2B01G103800 chr1B 635931354 635932031 677 False 728.000000 728 86.63700 158 814 1 chr1B.!!$F1 656
36 TraesCS2B01G103800 chr6D 20784993 20785890 897 True 739.000000 739 81.61700 2726 3624 1 chr6D.!!$R1 898
37 TraesCS2B01G103800 chrUn 355029483 355030909 1426 True 270.000000 270 70.70200 2204 3625 1 chrUn.!!$R3 1421

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
673 685 0.315625 CGCTGCGCATGATTAGTGTG 60.316 55.0 12.24 0.0 0.00 3.82 F
2537 5067 0.107752 TCATGATGCTGCCTACGCAA 60.108 50.0 0.00 0.0 46.66 4.85 F
2858 5388 0.036022 GTGGCTCCTGAGTTTGCTCT 59.964 55.0 0.00 0.0 42.13 4.09 F
3077 5615 0.178068 GGAGCAGAAGGCCGTCAATA 59.822 55.0 21.26 0.0 46.50 1.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2599 5129 0.037326 TCATCTTCTGTGGCACCGAC 60.037 55.000 16.26 0.0 0.00 4.79 R
3593 6147 1.271379 GCGGGGTAAAAGGGAGTTTTG 59.729 52.381 0.00 0.0 38.85 2.44 R
4847 7407 0.039618 ACCGGGACAAATGGCTCATT 59.960 50.000 6.32 0.0 35.39 2.57 R
5032 7592 0.034477 GGATGTCATTTGGTCCCGGT 60.034 55.000 0.00 0.0 0.00 5.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 1.127582 CAGCTGAGCTTACAAGTTCGC 59.872 52.381 8.42 11.58 38.88 4.70
26 27 1.148310 GCTGAGCTTACAAGTTCGCA 58.852 50.000 0.00 0.00 38.88 5.10
27 28 1.531149 GCTGAGCTTACAAGTTCGCAA 59.469 47.619 0.00 0.00 38.88 4.85
28 29 2.412065 GCTGAGCTTACAAGTTCGCAAG 60.412 50.000 0.00 3.83 38.88 4.01
29 30 1.531149 TGAGCTTACAAGTTCGCAAGC 59.469 47.619 0.00 0.00 42.92 4.01
30 31 0.875059 AGCTTACAAGTTCGCAAGCC 59.125 50.000 8.34 0.00 43.48 4.35
32 33 1.200020 GCTTACAAGTTCGCAAGCCAT 59.800 47.619 0.00 0.00 37.92 4.40
34 35 3.119990 GCTTACAAGTTCGCAAGCCATAA 60.120 43.478 0.00 0.00 37.92 1.90
35 36 4.614993 GCTTACAAGTTCGCAAGCCATAAA 60.615 41.667 0.00 0.00 37.92 1.40
36 37 5.637006 TTACAAGTTCGCAAGCCATAAAT 57.363 34.783 0.00 0.00 37.18 1.40
37 38 4.096732 ACAAGTTCGCAAGCCATAAATC 57.903 40.909 0.00 0.00 37.18 2.17
38 39 3.505680 ACAAGTTCGCAAGCCATAAATCA 59.494 39.130 0.00 0.00 37.18 2.57
39 40 3.764885 AGTTCGCAAGCCATAAATCAC 57.235 42.857 0.00 0.00 37.18 3.06
40 41 2.095853 AGTTCGCAAGCCATAAATCACG 59.904 45.455 0.00 0.00 37.18 4.35
41 42 1.732941 TCGCAAGCCATAAATCACGT 58.267 45.000 0.00 0.00 37.18 4.49
42 43 1.396648 TCGCAAGCCATAAATCACGTG 59.603 47.619 9.94 9.94 37.18 4.49
43 44 1.130373 CGCAAGCCATAAATCACGTGT 59.870 47.619 16.51 0.00 0.00 4.49
44 45 2.518949 GCAAGCCATAAATCACGTGTG 58.481 47.619 16.51 5.75 0.00 3.82
45 46 2.095263 GCAAGCCATAAATCACGTGTGT 60.095 45.455 16.51 2.69 0.00 3.72
46 47 3.611530 GCAAGCCATAAATCACGTGTGTT 60.612 43.478 16.51 12.92 0.00 3.32
47 48 4.158384 CAAGCCATAAATCACGTGTGTTC 58.842 43.478 16.51 0.53 0.00 3.18
48 49 3.407698 AGCCATAAATCACGTGTGTTCA 58.592 40.909 16.51 0.00 0.00 3.18
50 51 3.058570 GCCATAAATCACGTGTGTTCACA 60.059 43.478 16.51 1.23 44.02 3.58
52 53 5.515184 CCATAAATCACGTGTGTTCACAAA 58.485 37.500 16.51 0.00 44.02 2.83
54 55 6.473778 CCATAAATCACGTGTGTTCACAAAAA 59.526 34.615 16.51 0.00 44.02 1.94
75 76 5.565723 AAAGTACGCACACTAAGTAAACG 57.434 39.130 0.00 0.00 0.00 3.60
76 77 4.488126 AGTACGCACACTAAGTAAACGA 57.512 40.909 0.00 0.00 0.00 3.85
77 78 5.051891 AGTACGCACACTAAGTAAACGAT 57.948 39.130 0.00 0.00 0.00 3.73
78 79 4.855388 AGTACGCACACTAAGTAAACGATG 59.145 41.667 0.00 0.00 0.00 3.84
79 80 2.991190 ACGCACACTAAGTAAACGATGG 59.009 45.455 0.00 0.00 0.00 3.51
80 81 2.222729 CGCACACTAAGTAAACGATGGC 60.223 50.000 0.00 0.00 0.00 4.40
81 82 2.222729 GCACACTAAGTAAACGATGGCG 60.223 50.000 0.00 0.00 44.79 5.69
82 83 1.997606 ACACTAAGTAAACGATGGCGC 59.002 47.619 0.00 0.00 42.48 6.53
83 84 1.996898 CACTAAGTAAACGATGGCGCA 59.003 47.619 10.83 0.00 42.48 6.09
86 87 1.732941 AAGTAAACGATGGCGCATCA 58.267 45.000 10.83 0.00 40.54 3.07
87 88 1.732941 AGTAAACGATGGCGCATCAA 58.267 45.000 10.83 0.00 40.54 2.57
88 89 2.288666 AGTAAACGATGGCGCATCAAT 58.711 42.857 10.83 0.00 40.54 2.57
89 90 2.287915 AGTAAACGATGGCGCATCAATC 59.712 45.455 10.83 5.64 40.54 2.67
117 118 1.070445 ACGCCATGATAGAGCTGCC 59.930 57.895 0.00 0.00 0.00 4.85
147 148 3.413327 ACCAGAGTGATACGCGATATCT 58.587 45.455 15.93 4.04 40.52 1.98
150 151 3.687212 CAGAGTGATACGCGATATCTCCT 59.313 47.826 15.93 14.94 40.52 3.69
152 153 5.006261 CAGAGTGATACGCGATATCTCCTAG 59.994 48.000 15.93 8.89 40.52 3.02
153 154 4.193090 AGTGATACGCGATATCTCCTAGG 58.807 47.826 15.93 0.82 40.52 3.02
154 155 2.943690 TGATACGCGATATCTCCTAGGC 59.056 50.000 15.93 0.00 40.52 3.93
156 157 1.617322 ACGCGATATCTCCTAGGCAA 58.383 50.000 15.93 0.00 0.00 4.52
167 168 3.009143 TCTCCTAGGCAAAAAGTTCCTCC 59.991 47.826 2.96 0.00 0.00 4.30
207 208 3.997021 GTGCCCATTATCTTATCCGTCTG 59.003 47.826 0.00 0.00 0.00 3.51
212 213 6.288294 CCCATTATCTTATCCGTCTGTTTCA 58.712 40.000 0.00 0.00 0.00 2.69
224 225 5.812127 TCCGTCTGTTTCACATTGAGATATG 59.188 40.000 0.00 0.00 0.00 1.78
233 234 4.193865 CACATTGAGATATGTGCACCTGA 58.806 43.478 15.69 0.00 46.13 3.86
239 240 3.211865 AGATATGTGCACCTGAAGCATG 58.788 45.455 15.69 0.00 44.79 4.06
288 289 5.363868 AGTGATTAGTAGCTTGCATGGACTA 59.636 40.000 0.00 0.00 0.00 2.59
289 290 5.463724 GTGATTAGTAGCTTGCATGGACTAC 59.536 44.000 6.84 6.84 36.16 2.73
296 297 3.007940 AGCTTGCATGGACTACAGTACAA 59.992 43.478 0.00 0.00 43.04 2.41
359 360 9.092876 CACAAGGCAAAGTAGAATAAACAAAAA 57.907 29.630 0.00 0.00 0.00 1.94
377 378 6.007703 ACAAAAAGATTTTCGGTGGGATCTA 58.992 36.000 0.00 0.00 0.00 1.98
387 388 2.480759 CGGTGGGATCTACTGTAAACCG 60.481 54.545 0.00 0.00 42.74 4.44
409 410 5.289675 CCGTATGCAGTTTTCTTAGACTGAG 59.710 44.000 7.61 0.00 44.65 3.35
413 414 9.372369 GTATGCAGTTTTCTTAGACTGAGTTAT 57.628 33.333 7.61 0.00 44.65 1.89
426 427 9.588096 TTAGACTGAGTTATATCAAGCCTCATA 57.412 33.333 0.00 0.00 32.20 2.15
507 509 5.292765 TGCTTTACTGTTTGAGAGAGAGTG 58.707 41.667 0.00 0.00 0.00 3.51
521 523 5.759059 AGAGAGAGTGAGAAGAGACATCAT 58.241 41.667 0.00 0.00 0.00 2.45
528 530 5.357878 AGTGAGAAGAGACATCATGAGAGAC 59.642 44.000 0.09 0.00 0.00 3.36
530 532 5.713861 TGAGAAGAGACATCATGAGAGACAA 59.286 40.000 0.09 0.00 0.00 3.18
544 548 8.756927 TCATGAGAGACAATCAGAGATAAAGTT 58.243 33.333 0.00 0.00 0.00 2.66
545 549 9.381033 CATGAGAGACAATCAGAGATAAAGTTT 57.619 33.333 0.00 0.00 0.00 2.66
569 579 5.888691 TTTTATAGAAACTCGGCATGCAA 57.111 34.783 21.36 5.89 0.00 4.08
612 622 0.965439 AGGCTGACACACACTCTCTC 59.035 55.000 0.00 0.00 0.00 3.20
614 624 1.067915 GGCTGACACACACTCTCTCTC 60.068 57.143 0.00 0.00 0.00 3.20
632 644 5.026121 TCTCTCTTTTCTATTCCAGGAGCA 58.974 41.667 0.00 0.00 0.00 4.26
660 672 4.374702 GACACTGTTGGCGCTGCG 62.375 66.667 19.17 19.17 0.00 5.18
671 683 4.886982 CGCTGCGCATGATTAGTG 57.113 55.556 12.24 0.00 0.00 2.74
672 684 2.009108 CGCTGCGCATGATTAGTGT 58.991 52.632 12.24 0.00 0.00 3.55
673 685 0.315625 CGCTGCGCATGATTAGTGTG 60.316 55.000 12.24 0.00 0.00 3.82
674 686 1.009078 GCTGCGCATGATTAGTGTGA 58.991 50.000 12.24 0.00 0.00 3.58
675 687 1.004185 GCTGCGCATGATTAGTGTGAG 60.004 52.381 12.24 0.00 0.00 3.51
677 689 2.270923 TGCGCATGATTAGTGTGAGTC 58.729 47.619 5.66 0.00 0.00 3.36
678 690 2.270923 GCGCATGATTAGTGTGAGTCA 58.729 47.619 0.30 0.00 0.00 3.41
680 692 3.125146 GCGCATGATTAGTGTGAGTCAAA 59.875 43.478 0.30 0.00 0.00 2.69
681 693 4.641954 CGCATGATTAGTGTGAGTCAAAC 58.358 43.478 5.19 5.19 0.00 2.93
683 695 5.163824 CGCATGATTAGTGTGAGTCAAACAT 60.164 40.000 15.89 1.11 0.00 2.71
684 696 6.253746 GCATGATTAGTGTGAGTCAAACATC 58.746 40.000 15.89 10.77 0.00 3.06
685 697 6.093219 GCATGATTAGTGTGAGTCAAACATCT 59.907 38.462 15.89 0.00 0.00 2.90
686 698 7.461918 CATGATTAGTGTGAGTCAAACATCTG 58.538 38.462 15.89 7.28 0.00 2.90
687 699 6.758254 TGATTAGTGTGAGTCAAACATCTGA 58.242 36.000 15.89 0.00 0.00 3.27
688 700 7.389232 TGATTAGTGTGAGTCAAACATCTGAT 58.611 34.615 15.89 0.00 0.00 2.90
690 702 8.627208 ATTAGTGTGAGTCAAACATCTGATTT 57.373 30.769 15.89 0.00 0.00 2.17
691 703 6.309712 AGTGTGAGTCAAACATCTGATTTG 57.690 37.500 15.89 0.00 38.21 2.32
692 704 6.057533 AGTGTGAGTCAAACATCTGATTTGA 58.942 36.000 15.89 3.04 42.37 2.69
693 705 6.204301 AGTGTGAGTCAAACATCTGATTTGAG 59.796 38.462 15.89 0.00 44.55 3.02
694 706 5.049198 TGTGAGTCAAACATCTGATTTGAGC 60.049 40.000 6.67 4.12 44.55 4.26
695 707 5.049198 GTGAGTCAAACATCTGATTTGAGCA 60.049 40.000 6.67 6.11 44.55 4.26
696 708 5.049198 TGAGTCAAACATCTGATTTGAGCAC 60.049 40.000 6.67 3.61 44.55 4.40
697 709 4.823442 AGTCAAACATCTGATTTGAGCACA 59.177 37.500 6.67 0.00 44.55 4.57
698 710 5.475909 AGTCAAACATCTGATTTGAGCACAT 59.524 36.000 6.67 0.00 44.55 3.21
699 711 5.571741 GTCAAACATCTGATTTGAGCACATG 59.428 40.000 6.67 0.00 44.55 3.21
700 712 3.777465 ACATCTGATTTGAGCACATGC 57.223 42.857 0.00 0.00 42.49 4.06
701 713 3.086282 ACATCTGATTTGAGCACATGCA 58.914 40.909 6.64 0.00 45.16 3.96
702 714 3.699538 ACATCTGATTTGAGCACATGCAT 59.300 39.130 6.64 0.00 45.16 3.96
704 716 2.686405 TCTGATTTGAGCACATGCATCC 59.314 45.455 6.64 0.00 45.16 3.51
707 719 1.466856 TTTGAGCACATGCATCCTCC 58.533 50.000 6.64 0.00 45.16 4.30
709 721 1.890979 GAGCACATGCATCCTCCGG 60.891 63.158 6.64 0.00 45.16 5.14
787 809 4.027437 GGCCTAGATAAGAGGTCCCATAG 58.973 52.174 0.00 0.00 36.37 2.23
845 867 3.396491 CGTAACCTCACGTCCTCAC 57.604 57.895 0.00 0.00 37.16 3.51
850 3019 1.046472 ACCTCACGTCCTCACCACAA 61.046 55.000 0.00 0.00 0.00 3.33
872 3041 0.738389 ACCAACAAGCTTGACAACGG 59.262 50.000 32.50 23.10 0.00 4.44
936 3108 1.595993 GAGAGTAGACACGCCAGGCA 61.596 60.000 13.30 0.00 0.00 4.75
940 3112 2.049767 TAGACACGCCAGGCATCGA 61.050 57.895 13.30 0.00 0.00 3.59
946 3118 2.279120 GCCAGGCATCGACGAGAG 60.279 66.667 6.55 0.00 0.00 3.20
1036 3210 0.550914 TCTTGTTGTTGGAGGCACCT 59.449 50.000 1.84 0.00 39.86 4.00
1042 3216 1.136828 TGTTGGAGGCACCTGTTACT 58.863 50.000 1.84 0.00 39.86 2.24
1067 3241 1.839994 CAGGAGGATAGTGAAGGCCAA 59.160 52.381 5.01 0.00 0.00 4.52
1106 3280 1.293498 CCTACGTGCTGTTGAGGCT 59.707 57.895 0.00 0.00 0.00 4.58
1116 3290 0.614697 TGTTGAGGCTGGAGATCGGA 60.615 55.000 0.00 0.00 0.00 4.55
1131 3305 0.876399 TCGGACTCGACATCGACAAA 59.124 50.000 0.00 0.00 44.22 2.83
1281 3455 1.122632 TCCGTAGCCACAACCTCCAA 61.123 55.000 0.00 0.00 0.00 3.53
1313 3487 0.682209 CTGGTGGAGGCCATCAAAGG 60.682 60.000 5.01 0.00 44.73 3.11
1328 3506 2.107366 CAAAGGGGCCGGAAATGTTAT 58.893 47.619 5.05 0.00 0.00 1.89
1346 3524 5.269991 TGTTATGGTAGGCTAACTCACTCT 58.730 41.667 11.49 0.00 0.00 3.24
1350 3528 2.458620 GTAGGCTAACTCACTCTGGGT 58.541 52.381 0.00 0.00 27.78 4.51
1351 3529 1.270907 AGGCTAACTCACTCTGGGTG 58.729 55.000 0.00 0.00 46.60 4.61
1855 4383 5.467035 AATTTGTCGAACATCCCACAAAT 57.533 34.783 3.58 3.58 46.53 2.32
1907 4436 1.874739 CGGTTAACACTGGCGGAAAGA 60.875 52.381 8.10 0.00 0.00 2.52
1944 4473 3.160585 CTGACTGGGCTGGTCCAA 58.839 61.111 0.00 0.00 36.21 3.53
1951 4480 2.110011 ACTGGGCTGGTCCAATTTACTT 59.890 45.455 0.00 0.00 36.21 2.24
1954 4483 4.941713 TGGGCTGGTCCAATTTACTTATT 58.058 39.130 0.00 0.00 36.21 1.40
2003 4532 3.396276 TGAGGTTACCAAAGTCAATGGGA 59.604 43.478 3.51 0.00 42.48 4.37
2021 4550 1.763545 GGAGGTATGGGGTTCAGAGAC 59.236 57.143 0.00 0.00 0.00 3.36
2066 4595 3.512516 GCTAAGCAAGCCTGGCGG 61.513 66.667 13.96 11.02 46.25 6.13
2081 4610 0.394565 GGCGGCTCATTGATACTCCT 59.605 55.000 0.00 0.00 0.00 3.69
2129 4658 2.576648 GTCCAAGTATTTCCCCTCAGGT 59.423 50.000 0.00 0.00 36.75 4.00
2156 4685 5.655090 CCTTTTGGATACGGTTTTCCCTAAT 59.345 40.000 7.19 0.00 44.07 1.73
2171 4700 1.968050 CTAATCAGGGGTCGGCGGTT 61.968 60.000 7.21 0.00 0.00 4.44
2198 4727 4.164981 AGGGTATATTACATGGCCTCGAA 58.835 43.478 3.32 0.00 0.00 3.71
2223 4752 6.121776 TGCTAAAGACAGGAGTTATTTGGA 57.878 37.500 0.00 0.00 0.00 3.53
2225 4754 5.586643 GCTAAAGACAGGAGTTATTTGGAGG 59.413 44.000 0.00 0.00 0.00 4.30
2231 4760 1.685180 GGAGTTATTTGGAGGGTGGGC 60.685 57.143 0.00 0.00 0.00 5.36
2279 4808 3.718723 GGATCCATGGATACCTAGAGCT 58.281 50.000 27.38 1.50 34.60 4.09
2312 4841 2.027561 ACCTATAACTCCAAAGCGCACA 60.028 45.455 11.47 0.00 0.00 4.57
2318 4847 1.005037 TCCAAAGCGCACATCTCGT 60.005 52.632 11.47 0.00 0.00 4.18
2336 4865 4.876679 TCTCGTCTAAATCGTGTCTCTGAT 59.123 41.667 0.00 0.00 0.00 2.90
2383 4912 2.636893 GGATGGATAGGCTGTCACAGAT 59.363 50.000 9.70 0.00 32.44 2.90
2412 4941 7.127012 TGGCAAATGGATATTGATCACATTT 57.873 32.000 12.89 12.89 40.18 2.32
2479 5009 1.952621 TCCCGGAGAAGAATGGAAGT 58.047 50.000 0.73 0.00 0.00 3.01
2482 5012 3.010420 CCCGGAGAAGAATGGAAGTTTC 58.990 50.000 0.73 0.00 0.00 2.78
2488 5018 6.000840 GGAGAAGAATGGAAGTTTCTCTGTT 58.999 40.000 11.49 0.00 43.09 3.16
2537 5067 0.107752 TCATGATGCTGCCTACGCAA 60.108 50.000 0.00 0.00 46.66 4.85
2548 5078 1.227674 CTACGCAAGGGGCTCATCC 60.228 63.158 0.00 0.00 46.39 3.51
2560 5090 0.820871 GCTCATCCTCTGACGTTCCT 59.179 55.000 0.00 0.00 0.00 3.36
2599 5129 3.563808 TCTGGAACTGTGTTTGGAAATCG 59.436 43.478 0.00 0.00 0.00 3.34
2629 5159 2.011947 CAGAAGATGAAGATTGCGGCA 58.988 47.619 0.00 0.00 0.00 5.69
2644 5174 1.178534 CGGCATGGAAAGTGGTGGTT 61.179 55.000 0.00 0.00 0.00 3.67
2686 5216 2.739292 TGCAAGAAGTACAGACACGTC 58.261 47.619 0.00 0.00 0.00 4.34
2701 5231 0.109226 ACGTCTCAAAGCGCTCTACC 60.109 55.000 12.06 0.00 0.00 3.18
2710 5240 2.982130 CGCTCTACCTGCCCACTT 59.018 61.111 0.00 0.00 0.00 3.16
2763 5293 2.866156 CCTTAATCACATGCGATCACGT 59.134 45.455 0.00 0.00 41.98 4.49
2768 5298 2.020423 CATGCGATCACGTGCGTG 59.980 61.111 17.44 17.44 46.64 5.34
2858 5388 0.036022 GTGGCTCCTGAGTTTGCTCT 59.964 55.000 0.00 0.00 42.13 4.09
2878 5408 0.829990 TGCAATGCTCGGATCAGGTA 59.170 50.000 6.82 0.00 0.00 3.08
2954 5491 1.281867 CTCATGGCAAGGAGGTACCAA 59.718 52.381 15.94 0.00 42.04 3.67
2960 5497 0.872388 CAAGGAGGTACCAACAACGC 59.128 55.000 15.94 0.00 42.04 4.84
2965 5502 2.554272 GTACCAACAACGCAGGCG 59.446 61.111 12.71 12.71 46.03 5.52
2994 5531 6.262720 GTGGAGTACCTGGATAGTTACTACAG 59.737 46.154 0.00 0.00 37.04 2.74
3004 5541 3.521947 AGTTACTACAGGTCCATTCGC 57.478 47.619 0.00 0.00 0.00 4.70
3077 5615 0.178068 GGAGCAGAAGGCCGTCAATA 59.822 55.000 21.26 0.00 46.50 1.90
3078 5616 1.202698 GGAGCAGAAGGCCGTCAATAT 60.203 52.381 21.26 3.49 46.50 1.28
3136 5680 3.217743 GGGACCGTAGCCCTCTCG 61.218 72.222 0.00 0.00 42.56 4.04
3168 5712 0.404040 TTTCGGCAGGAAGATGGGTT 59.596 50.000 0.00 0.00 35.70 4.11
3201 5745 5.118990 CGGTATTGTGTTGAGAGATGGATT 58.881 41.667 0.00 0.00 0.00 3.01
3217 5761 7.233757 AGAGATGGATTAGGTATGGTGTTACTC 59.766 40.741 0.00 0.00 0.00 2.59
3218 5762 7.076446 AGATGGATTAGGTATGGTGTTACTCT 58.924 38.462 0.00 0.00 0.00 3.24
3253 5798 6.418819 GCTACATGTTTCATTGTAATGATGCC 59.581 38.462 2.30 1.31 44.27 4.40
3266 5811 1.225704 GATGCCTTGGAGGTGGAGG 59.774 63.158 0.00 0.00 37.80 4.30
3305 5850 1.779221 CATGGCCCTGGCTATTCAAA 58.221 50.000 8.29 0.00 40.34 2.69
3308 5853 0.455815 GGCCCTGGCTATTCAAAACG 59.544 55.000 8.29 0.00 41.60 3.60
3313 5858 3.329114 GGCTATTCAAAACGCAGCC 57.671 52.632 0.00 0.00 44.54 4.85
3318 5863 0.240945 ATTCAAAACGCAGCCCTTCG 59.759 50.000 0.00 0.00 0.00 3.79
3365 5910 1.108727 TGCCCTTTCAGTGTTGGCAG 61.109 55.000 11.67 0.00 46.57 4.85
3439 5986 4.657013 ACTTGATGAAGGAAAGGGAGTTC 58.343 43.478 0.00 0.00 32.95 3.01
3443 5990 4.019860 TGATGAAGGAAAGGGAGTTCTCAG 60.020 45.833 2.24 0.00 0.00 3.35
3458 6005 7.268586 GGAGTTCTCAGCTCAGAAATTACATA 58.731 38.462 0.00 0.00 34.11 2.29
3536 6086 2.737180 CAGTGTGGGCTCACTCGT 59.263 61.111 19.48 0.00 45.37 4.18
3651 6205 3.308438 AATTTGATGCACAGTCCTTGC 57.692 42.857 0.00 0.00 40.63 4.01
3656 6210 3.493028 TGCACAGTCCTTGCAAGAA 57.507 47.368 28.05 4.03 46.90 2.52
3657 6211 1.761449 TGCACAGTCCTTGCAAGAAA 58.239 45.000 28.05 12.49 46.90 2.52
3658 6212 2.098614 TGCACAGTCCTTGCAAGAAAA 58.901 42.857 28.05 9.88 46.90 2.29
3659 6213 2.495270 TGCACAGTCCTTGCAAGAAAAA 59.505 40.909 28.05 7.32 46.90 1.94
3679 6233 6.579666 AAAAATTGATGCACAGAGCTCTAA 57.420 33.333 17.75 5.54 45.94 2.10
3680 6234 6.579666 AAAATTGATGCACAGAGCTCTAAA 57.420 33.333 17.75 2.45 45.94 1.85
3681 6235 6.770746 AAATTGATGCACAGAGCTCTAAAT 57.229 33.333 17.75 7.60 45.94 1.40
3682 6236 7.870509 AAATTGATGCACAGAGCTCTAAATA 57.129 32.000 17.75 4.10 45.94 1.40
4230 6784 3.650942 ACACCTGAAGATAACCTGGTTCA 59.349 43.478 16.75 6.67 33.20 3.18
4239 6793 4.702131 AGATAACCTGGTTCATTTGCAGAC 59.298 41.667 16.75 0.00 0.00 3.51
4242 6796 3.233507 ACCTGGTTCATTTGCAGACATT 58.766 40.909 0.00 0.00 0.00 2.71
4273 6830 3.855689 ATCACCTTGCGGATTGAAAAG 57.144 42.857 0.00 0.00 0.00 2.27
4513 7070 0.829333 AAGCAAACATTGGCCACACA 59.171 45.000 3.88 0.00 0.00 3.72
4526 7083 4.472496 TGGCCACACATATATTTCTGCAT 58.528 39.130 0.00 0.00 0.00 3.96
4688 7248 3.965347 TCCTAGTTGTATTACTCCTGGGC 59.035 47.826 0.00 0.00 0.00 5.36
4712 7272 1.177401 GCCGCTCCCTTCAAATTTCT 58.823 50.000 0.00 0.00 0.00 2.52
4787 7347 8.432110 AAGATGACATTGCAACGTATACAATA 57.568 30.769 0.00 0.00 32.89 1.90
4788 7348 7.851508 AGATGACATTGCAACGTATACAATAC 58.148 34.615 0.00 8.12 32.89 1.89
4790 7350 7.365840 TGACATTGCAACGTATACAATACAA 57.634 32.000 0.00 2.62 32.89 2.41
4791 7351 7.980062 TGACATTGCAACGTATACAATACAAT 58.020 30.769 0.00 4.79 32.89 2.71
4836 7396 5.301045 GGGCCTTAAACAAGACAATATACCC 59.699 44.000 0.84 0.00 0.00 3.69
4838 7398 6.183360 GGCCTTAAACAAGACAATATACCCAC 60.183 42.308 0.00 0.00 0.00 4.61
4839 7399 6.602009 GCCTTAAACAAGACAATATACCCACT 59.398 38.462 0.00 0.00 0.00 4.00
4841 7401 9.326413 CCTTAAACAAGACAATATACCCACTAG 57.674 37.037 0.00 0.00 0.00 2.57
4842 7402 9.886132 CTTAAACAAGACAATATACCCACTAGT 57.114 33.333 0.00 0.00 0.00 2.57
4845 7405 8.834004 AACAAGACAATATACCCACTAGTAGA 57.166 34.615 3.59 0.00 0.00 2.59
4846 7406 8.834004 ACAAGACAATATACCCACTAGTAGAA 57.166 34.615 3.59 0.00 0.00 2.10
4847 7407 9.263446 ACAAGACAATATACCCACTAGTAGAAA 57.737 33.333 3.59 0.00 0.00 2.52
4853 7413 9.209175 CAATATACCCACTAGTAGAAAATGAGC 57.791 37.037 3.59 0.00 0.00 4.26
4854 7414 4.489306 ACCCACTAGTAGAAAATGAGCC 57.511 45.455 3.59 0.00 0.00 4.70
4855 7415 3.844211 ACCCACTAGTAGAAAATGAGCCA 59.156 43.478 3.59 0.00 0.00 4.75
4856 7416 4.475016 ACCCACTAGTAGAAAATGAGCCAT 59.525 41.667 3.59 0.00 0.00 4.40
4857 7417 5.044846 ACCCACTAGTAGAAAATGAGCCATT 60.045 40.000 3.59 0.00 35.39 3.16
4858 7418 5.888161 CCCACTAGTAGAAAATGAGCCATTT 59.112 40.000 3.59 7.18 44.62 2.32
4859 7419 6.183360 CCCACTAGTAGAAAATGAGCCATTTG 60.183 42.308 3.59 3.46 42.32 2.32
4860 7420 6.375455 CCACTAGTAGAAAATGAGCCATTTGT 59.625 38.462 3.59 7.19 42.32 2.83
4861 7421 7.414540 CCACTAGTAGAAAATGAGCCATTTGTC 60.415 40.741 3.59 11.38 42.32 3.18
4862 7422 5.904362 AGTAGAAAATGAGCCATTTGTCC 57.096 39.130 12.14 6.79 42.32 4.02
4863 7423 4.706962 AGTAGAAAATGAGCCATTTGTCCC 59.293 41.667 12.14 5.03 42.32 4.46
4864 7424 2.493278 AGAAAATGAGCCATTTGTCCCG 59.507 45.455 12.14 0.00 42.32 5.14
4865 7425 1.185315 AAATGAGCCATTTGTCCCGG 58.815 50.000 11.02 0.00 41.70 5.73
4866 7426 0.039618 AATGAGCCATTTGTCCCGGT 59.960 50.000 0.00 0.00 28.76 5.28
4867 7427 0.039618 ATGAGCCATTTGTCCCGGTT 59.960 50.000 0.00 0.00 0.00 4.44
4868 7428 0.178975 TGAGCCATTTGTCCCGGTTT 60.179 50.000 0.00 0.00 0.00 3.27
4869 7429 0.526211 GAGCCATTTGTCCCGGTTTC 59.474 55.000 0.00 0.00 0.00 2.78
4870 7430 0.178975 AGCCATTTGTCCCGGTTTCA 60.179 50.000 0.00 0.00 0.00 2.69
4871 7431 0.243636 GCCATTTGTCCCGGTTTCAG 59.756 55.000 0.00 0.00 0.00 3.02
4872 7432 1.904287 CCATTTGTCCCGGTTTCAGA 58.096 50.000 0.00 0.00 0.00 3.27
4873 7433 1.812571 CCATTTGTCCCGGTTTCAGAG 59.187 52.381 0.00 0.00 0.00 3.35
4874 7434 1.812571 CATTTGTCCCGGTTTCAGAGG 59.187 52.381 0.00 0.00 0.00 3.69
4875 7435 0.109723 TTTGTCCCGGTTTCAGAGGG 59.890 55.000 0.00 0.00 46.40 4.30
4882 7442 2.973945 CCGGTTTCAGAGGGACTTTAG 58.026 52.381 0.00 0.00 41.55 1.85
4883 7443 2.302157 CCGGTTTCAGAGGGACTTTAGT 59.698 50.000 0.00 0.00 41.55 2.24
4884 7444 3.586892 CGGTTTCAGAGGGACTTTAGTC 58.413 50.000 1.18 1.18 41.55 2.59
4885 7445 3.258622 CGGTTTCAGAGGGACTTTAGTCT 59.741 47.826 9.56 0.00 41.55 3.24
4886 7446 4.618693 CGGTTTCAGAGGGACTTTAGTCTC 60.619 50.000 9.56 5.77 45.72 3.36
4893 7453 3.233684 GGGACTTTAGTCTCGGTTCTG 57.766 52.381 9.56 0.00 44.20 3.02
4894 7454 2.094130 GGGACTTTAGTCTCGGTTCTGG 60.094 54.545 9.56 0.00 44.20 3.86
4895 7455 2.824341 GGACTTTAGTCTCGGTTCTGGA 59.176 50.000 9.56 0.00 44.20 3.86
4896 7456 3.257624 GGACTTTAGTCTCGGTTCTGGAA 59.742 47.826 9.56 0.00 44.20 3.53
4897 7457 4.236147 GACTTTAGTCTCGGTTCTGGAAC 58.764 47.826 5.02 5.02 41.65 3.62
4898 7458 4.855122 GACTTTAGTCTCGGTTCTGGAACC 60.855 50.000 19.31 19.31 46.81 3.62
4909 7469 4.684484 GTTCTGGAACCGGGACTAATAT 57.316 45.455 6.32 0.00 35.36 1.28
4910 7470 4.377897 GTTCTGGAACCGGGACTAATATG 58.622 47.826 6.32 0.00 35.36 1.78
4911 7471 3.649843 TCTGGAACCGGGACTAATATGT 58.350 45.455 6.32 0.00 0.00 2.29
4912 7472 4.035112 TCTGGAACCGGGACTAATATGTT 58.965 43.478 6.32 0.00 0.00 2.71
4913 7473 4.127171 CTGGAACCGGGACTAATATGTTG 58.873 47.826 6.32 0.00 0.00 3.33
4914 7474 3.775866 TGGAACCGGGACTAATATGTTGA 59.224 43.478 6.32 0.00 0.00 3.18
4915 7475 4.141801 TGGAACCGGGACTAATATGTTGAG 60.142 45.833 6.32 0.00 0.00 3.02
4916 7476 4.100498 GGAACCGGGACTAATATGTTGAGA 59.900 45.833 6.32 0.00 0.00 3.27
4917 7477 4.667519 ACCGGGACTAATATGTTGAGAC 57.332 45.455 6.32 0.00 0.00 3.36
4918 7478 4.287552 ACCGGGACTAATATGTTGAGACT 58.712 43.478 6.32 0.00 0.00 3.24
4919 7479 5.452255 ACCGGGACTAATATGTTGAGACTA 58.548 41.667 6.32 0.00 0.00 2.59
4920 7480 5.895534 ACCGGGACTAATATGTTGAGACTAA 59.104 40.000 6.32 0.00 0.00 2.24
4921 7481 6.381994 ACCGGGACTAATATGTTGAGACTAAA 59.618 38.462 6.32 0.00 0.00 1.85
4922 7482 6.924060 CCGGGACTAATATGTTGAGACTAAAG 59.076 42.308 0.00 0.00 0.00 1.85
4923 7483 6.421202 CGGGACTAATATGTTGAGACTAAAGC 59.579 42.308 0.00 0.00 0.00 3.51
4924 7484 6.706716 GGGACTAATATGTTGAGACTAAAGCC 59.293 42.308 0.00 0.00 0.00 4.35
4925 7485 6.706716 GGACTAATATGTTGAGACTAAAGCCC 59.293 42.308 0.00 0.00 0.00 5.19
4926 7486 7.195374 ACTAATATGTTGAGACTAAAGCCCA 57.805 36.000 0.00 0.00 0.00 5.36
4927 7487 7.630082 ACTAATATGTTGAGACTAAAGCCCAA 58.370 34.615 0.00 0.00 0.00 4.12
4928 7488 8.107095 ACTAATATGTTGAGACTAAAGCCCAAA 58.893 33.333 0.00 0.00 0.00 3.28
4929 7489 7.775053 AATATGTTGAGACTAAAGCCCAAAA 57.225 32.000 0.00 0.00 0.00 2.44
4930 7490 4.911514 TGTTGAGACTAAAGCCCAAAAC 57.088 40.909 0.00 0.00 0.00 2.43
4931 7491 3.634910 TGTTGAGACTAAAGCCCAAAACC 59.365 43.478 0.00 0.00 0.00 3.27
4932 7492 3.876309 TGAGACTAAAGCCCAAAACCT 57.124 42.857 0.00 0.00 0.00 3.50
4933 7493 4.178956 TGAGACTAAAGCCCAAAACCTT 57.821 40.909 0.00 0.00 0.00 3.50
4934 7494 4.542697 TGAGACTAAAGCCCAAAACCTTT 58.457 39.130 0.00 0.00 35.60 3.11
4935 7495 5.697067 TGAGACTAAAGCCCAAAACCTTTA 58.303 37.500 0.00 0.00 33.64 1.85
4936 7496 6.130569 TGAGACTAAAGCCCAAAACCTTTAA 58.869 36.000 0.00 0.00 34.27 1.52
4937 7497 6.780522 TGAGACTAAAGCCCAAAACCTTTAAT 59.219 34.615 0.00 0.00 34.27 1.40
4938 7498 7.039993 TGAGACTAAAGCCCAAAACCTTTAATC 60.040 37.037 0.00 0.00 34.27 1.75
4939 7499 6.210784 AGACTAAAGCCCAAAACCTTTAATCC 59.789 38.462 0.00 0.00 32.92 3.01
4940 7500 4.634012 AAAGCCCAAAACCTTTAATCCC 57.366 40.909 0.00 0.00 30.03 3.85
4941 7501 2.176045 AGCCCAAAACCTTTAATCCCG 58.824 47.619 0.00 0.00 0.00 5.14
4942 7502 1.206132 GCCCAAAACCTTTAATCCCGG 59.794 52.381 0.00 0.00 0.00 5.73
4943 7503 2.531771 CCCAAAACCTTTAATCCCGGT 58.468 47.619 0.00 0.00 0.00 5.28
4944 7504 2.901192 CCCAAAACCTTTAATCCCGGTT 59.099 45.455 0.00 0.00 42.52 4.44
4945 7505 3.056393 CCCAAAACCTTTAATCCCGGTTC 60.056 47.826 0.00 0.00 39.97 3.62
4946 7506 3.366577 CCAAAACCTTTAATCCCGGTTCG 60.367 47.826 0.00 0.00 39.97 3.95
4947 7507 1.456296 AACCTTTAATCCCGGTTCGC 58.544 50.000 0.00 0.00 36.32 4.70
4948 7508 0.616891 ACCTTTAATCCCGGTTCGCT 59.383 50.000 0.00 0.00 0.00 4.93
4949 7509 1.003928 ACCTTTAATCCCGGTTCGCTT 59.996 47.619 0.00 0.00 0.00 4.68
4950 7510 2.236893 ACCTTTAATCCCGGTTCGCTTA 59.763 45.455 0.00 0.00 0.00 3.09
4951 7511 2.610833 CCTTTAATCCCGGTTCGCTTAC 59.389 50.000 0.00 0.00 0.00 2.34
4952 7512 1.925229 TTAATCCCGGTTCGCTTACG 58.075 50.000 0.00 0.00 42.01 3.18
4962 7522 2.259204 CGCTTACGAACCGGGACA 59.741 61.111 6.32 0.00 43.93 4.02
4963 7523 1.373246 CGCTTACGAACCGGGACAA 60.373 57.895 6.32 0.00 43.93 3.18
4964 7524 0.945265 CGCTTACGAACCGGGACAAA 60.945 55.000 6.32 0.00 43.93 2.83
4965 7525 1.445871 GCTTACGAACCGGGACAAAT 58.554 50.000 6.32 0.00 0.00 2.32
4966 7526 1.129811 GCTTACGAACCGGGACAAATG 59.870 52.381 6.32 0.00 0.00 2.32
4967 7527 2.690786 CTTACGAACCGGGACAAATGA 58.309 47.619 6.32 0.00 0.00 2.57
4968 7528 3.267483 CTTACGAACCGGGACAAATGAT 58.733 45.455 6.32 0.00 0.00 2.45
4969 7529 1.448985 ACGAACCGGGACAAATGATG 58.551 50.000 6.32 0.00 0.00 3.07
4970 7530 0.098728 CGAACCGGGACAAATGATGC 59.901 55.000 6.32 0.00 0.00 3.91
4971 7531 1.463674 GAACCGGGACAAATGATGCT 58.536 50.000 6.32 0.00 0.00 3.79
4972 7532 1.401905 GAACCGGGACAAATGATGCTC 59.598 52.381 6.32 0.00 0.00 4.26
4973 7533 0.394352 ACCGGGACAAATGATGCTCC 60.394 55.000 6.32 0.00 0.00 4.70
4974 7534 0.394216 CCGGGACAAATGATGCTCCA 60.394 55.000 0.00 0.00 33.44 3.86
4975 7535 0.734889 CGGGACAAATGATGCTCCAC 59.265 55.000 0.00 0.00 33.44 4.02
4976 7536 0.734889 GGGACAAATGATGCTCCACG 59.265 55.000 0.00 0.00 33.44 4.94
4977 7537 1.453155 GGACAAATGATGCTCCACGT 58.547 50.000 0.00 0.00 32.60 4.49
4978 7538 1.131126 GGACAAATGATGCTCCACGTG 59.869 52.381 9.08 9.08 32.60 4.49
4979 7539 1.131126 GACAAATGATGCTCCACGTGG 59.869 52.381 29.26 29.26 0.00 4.94
4980 7540 0.179156 CAAATGATGCTCCACGTGGC 60.179 55.000 30.25 19.27 34.44 5.01
4981 7541 1.315257 AAATGATGCTCCACGTGGCC 61.315 55.000 30.25 21.91 34.44 5.36
4982 7542 4.758251 TGATGCTCCACGTGGCCG 62.758 66.667 30.25 22.44 40.83 6.13
5002 7562 3.075005 GCGGTGAGCCCAGGTAGA 61.075 66.667 0.00 0.00 40.81 2.59
5003 7563 2.656069 GCGGTGAGCCCAGGTAGAA 61.656 63.158 0.00 0.00 40.81 2.10
5004 7564 1.517832 CGGTGAGCCCAGGTAGAAG 59.482 63.158 0.00 0.00 0.00 2.85
5005 7565 1.908483 GGTGAGCCCAGGTAGAAGG 59.092 63.158 0.00 0.00 0.00 3.46
5010 7570 4.171186 CCCAGGTAGAAGGGCCTT 57.829 61.111 21.09 21.09 38.44 4.35
5011 7571 2.398919 CCCAGGTAGAAGGGCCTTT 58.601 57.895 21.92 12.70 38.44 3.11
5012 7572 1.591768 CCCAGGTAGAAGGGCCTTTA 58.408 55.000 21.92 11.69 38.44 1.85
5013 7573 1.490910 CCCAGGTAGAAGGGCCTTTAG 59.509 57.143 21.92 6.88 38.44 1.85
5014 7574 2.197465 CCAGGTAGAAGGGCCTTTAGT 58.803 52.381 21.92 10.92 31.73 2.24
5015 7575 2.170817 CCAGGTAGAAGGGCCTTTAGTC 59.829 54.545 21.92 7.64 31.73 2.59
5016 7576 2.170817 CAGGTAGAAGGGCCTTTAGTCC 59.829 54.545 21.92 18.87 31.73 3.85
5017 7577 2.046025 AGGTAGAAGGGCCTTTAGTCCT 59.954 50.000 21.92 20.63 0.00 3.85
5018 7578 2.170817 GGTAGAAGGGCCTTTAGTCCTG 59.829 54.545 21.92 0.00 0.00 3.86
5019 7579 1.290134 AGAAGGGCCTTTAGTCCTGG 58.710 55.000 21.92 0.00 0.00 4.45
5020 7580 0.992695 GAAGGGCCTTTAGTCCTGGT 59.007 55.000 21.92 0.00 0.00 4.00
5021 7581 1.354705 GAAGGGCCTTTAGTCCTGGTT 59.645 52.381 21.92 0.00 0.00 3.67
5022 7582 2.354261 AGGGCCTTTAGTCCTGGTTA 57.646 50.000 0.00 0.00 0.00 2.85
5023 7583 2.197465 AGGGCCTTTAGTCCTGGTTAG 58.803 52.381 0.00 0.00 0.00 2.34
5024 7584 1.914108 GGGCCTTTAGTCCTGGTTAGT 59.086 52.381 0.84 0.00 0.00 2.24
5025 7585 3.109928 GGGCCTTTAGTCCTGGTTAGTA 58.890 50.000 0.84 0.00 0.00 1.82
5026 7586 3.520721 GGGCCTTTAGTCCTGGTTAGTAA 59.479 47.826 0.84 0.00 0.00 2.24
5027 7587 4.511527 GGCCTTTAGTCCTGGTTAGTAAC 58.488 47.826 4.32 4.32 0.00 2.50
5028 7588 4.019950 GGCCTTTAGTCCTGGTTAGTAACA 60.020 45.833 14.81 0.93 0.00 2.41
5029 7589 4.934001 GCCTTTAGTCCTGGTTAGTAACAC 59.066 45.833 14.81 4.48 0.00 3.32
5030 7590 5.485620 CCTTTAGTCCTGGTTAGTAACACC 58.514 45.833 14.81 0.00 34.52 4.16
5031 7591 5.012354 CCTTTAGTCCTGGTTAGTAACACCA 59.988 44.000 14.81 4.56 42.34 4.17
5032 7592 6.464749 CCTTTAGTCCTGGTTAGTAACACCAA 60.465 42.308 14.81 0.00 43.96 3.67
5033 7593 4.347360 AGTCCTGGTTAGTAACACCAAC 57.653 45.455 14.81 7.38 43.96 3.77
5034 7594 3.072038 AGTCCTGGTTAGTAACACCAACC 59.928 47.826 14.81 0.00 43.96 3.77
5035 7595 2.037511 TCCTGGTTAGTAACACCAACCG 59.962 50.000 14.81 0.00 43.96 4.44
5036 7596 2.419667 CTGGTTAGTAACACCAACCGG 58.580 52.381 14.81 0.00 43.96 5.28
5037 7597 1.072015 TGGTTAGTAACACCAACCGGG 59.928 52.381 14.81 0.00 43.86 5.73
5038 7598 1.347378 GGTTAGTAACACCAACCGGGA 59.653 52.381 14.81 0.00 41.15 5.14
5039 7599 2.416747 GTTAGTAACACCAACCGGGAC 58.583 52.381 6.32 0.00 41.15 4.46
5040 7600 0.975887 TAGTAACACCAACCGGGACC 59.024 55.000 6.32 0.00 41.15 4.46
5041 7601 1.055551 AGTAACACCAACCGGGACCA 61.056 55.000 6.32 0.00 41.15 4.02
5042 7602 0.179023 GTAACACCAACCGGGACCAA 60.179 55.000 6.32 0.00 41.15 3.67
5043 7603 0.549950 TAACACCAACCGGGACCAAA 59.450 50.000 6.32 0.00 41.15 3.28
5044 7604 0.105913 AACACCAACCGGGACCAAAT 60.106 50.000 6.32 0.00 41.15 2.32
5045 7605 0.825840 ACACCAACCGGGACCAAATG 60.826 55.000 6.32 0.00 41.15 2.32
5046 7606 0.538516 CACCAACCGGGACCAAATGA 60.539 55.000 6.32 0.00 41.15 2.57
5047 7607 0.538746 ACCAACCGGGACCAAATGAC 60.539 55.000 6.32 0.00 41.15 3.06
5048 7608 0.538516 CCAACCGGGACCAAATGACA 60.539 55.000 6.32 0.00 40.01 3.58
5049 7609 1.544724 CAACCGGGACCAAATGACAT 58.455 50.000 6.32 0.00 0.00 3.06
5050 7610 1.472480 CAACCGGGACCAAATGACATC 59.528 52.381 6.32 0.00 0.00 3.06
5051 7611 0.034477 ACCGGGACCAAATGACATCC 60.034 55.000 6.32 0.00 0.00 3.51
5052 7612 0.034574 CCGGGACCAAATGACATCCA 60.035 55.000 0.00 0.00 32.45 3.41
5053 7613 1.094785 CGGGACCAAATGACATCCAC 58.905 55.000 0.00 0.00 32.45 4.02
5054 7614 1.094785 GGGACCAAATGACATCCACG 58.905 55.000 0.00 0.00 32.45 4.94
5055 7615 1.613255 GGGACCAAATGACATCCACGT 60.613 52.381 0.00 0.00 32.45 4.49
5056 7616 1.468520 GGACCAAATGACATCCACGTG 59.531 52.381 9.08 9.08 0.00 4.49
5057 7617 2.151202 GACCAAATGACATCCACGTGT 58.849 47.619 15.65 0.00 34.39 4.49
5058 7618 2.151202 ACCAAATGACATCCACGTGTC 58.849 47.619 15.65 5.85 46.75 3.67
5062 7622 4.673403 GACATCCACGTGTCAGCA 57.327 55.556 15.65 0.00 46.04 4.41
5063 7623 2.449548 GACATCCACGTGTCAGCAG 58.550 57.895 15.65 0.00 46.04 4.24
5064 7624 1.630244 GACATCCACGTGTCAGCAGC 61.630 60.000 15.65 0.00 46.04 5.25
5065 7625 1.375140 CATCCACGTGTCAGCAGCT 60.375 57.895 15.65 0.00 0.00 4.24
5066 7626 1.079543 ATCCACGTGTCAGCAGCTC 60.080 57.895 15.65 0.00 0.00 4.09
5067 7627 1.820010 ATCCACGTGTCAGCAGCTCA 61.820 55.000 15.65 0.00 0.00 4.26
5068 7628 2.025969 CCACGTGTCAGCAGCTCAG 61.026 63.158 15.65 0.00 0.00 3.35
5069 7629 2.025969 CACGTGTCAGCAGCTCAGG 61.026 63.158 7.58 0.00 0.00 3.86
5226 7788 4.215908 ACCTCTCTTATATCCGTGCTTGA 58.784 43.478 0.00 0.00 0.00 3.02
5313 7883 5.100259 ACCATTAAGTACACAAGATCGTCG 58.900 41.667 0.00 0.00 0.00 5.12
5407 7979 2.538512 TCTATCCGACGCTACTAGCA 57.461 50.000 8.78 0.00 42.58 3.49
5477 8055 6.934645 TCTAAGGTGTATTTGAACTTCCACAG 59.065 38.462 0.00 0.00 0.00 3.66
5487 8065 3.056107 TGAACTTCCACAGGGTATTCTCG 60.056 47.826 0.00 0.00 34.93 4.04
5499 8077 7.767198 CACAGGGTATTCTCGGTCTTTATTTAA 59.233 37.037 0.00 0.00 0.00 1.52
5711 11007 2.150014 TTTTGGAGTAGCCCCCAGCC 62.150 60.000 0.00 0.00 45.47 4.85
5713 11009 4.825679 GGAGTAGCCCCCAGCCCT 62.826 72.222 0.00 0.00 45.47 5.19
5714 11010 3.164977 GAGTAGCCCCCAGCCCTC 61.165 72.222 0.00 0.00 45.47 4.30
5715 11011 4.825679 AGTAGCCCCCAGCCCTCC 62.826 72.222 0.00 0.00 45.47 4.30
5819 11115 5.581085 CCACAAGACCTTTACGAGAAATAGG 59.419 44.000 0.00 0.00 0.00 2.57
5873 14916 9.774742 CTTAATGGTTTTGATGAAACTAGCTAC 57.225 33.333 0.00 0.00 45.55 3.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 1.127582 GCGAACTTGTAAGCTCAGCTG 59.872 52.381 7.63 7.63 39.62 4.24
6 7 1.270305 TGCGAACTTGTAAGCTCAGCT 60.270 47.619 0.00 0.00 42.56 4.24
7 8 1.148310 TGCGAACTTGTAAGCTCAGC 58.852 50.000 0.00 0.00 0.00 4.26
8 9 3.446184 CTTGCGAACTTGTAAGCTCAG 57.554 47.619 0.00 0.00 0.00 3.35
13 14 4.678509 TTATGGCTTGCGAACTTGTAAG 57.321 40.909 0.00 0.00 35.04 2.34
14 15 5.182190 TGATTTATGGCTTGCGAACTTGTAA 59.818 36.000 0.00 0.00 0.00 2.41
15 16 4.697828 TGATTTATGGCTTGCGAACTTGTA 59.302 37.500 0.00 0.00 0.00 2.41
16 17 3.505680 TGATTTATGGCTTGCGAACTTGT 59.494 39.130 0.00 0.00 0.00 3.16
19 20 2.095853 CGTGATTTATGGCTTGCGAACT 59.904 45.455 0.00 0.00 0.00 3.01
20 21 2.159572 ACGTGATTTATGGCTTGCGAAC 60.160 45.455 0.00 0.00 0.00 3.95
23 24 1.130373 ACACGTGATTTATGGCTTGCG 59.870 47.619 25.01 0.00 0.00 4.85
25 26 3.829886 ACACACGTGATTTATGGCTTG 57.170 42.857 25.01 8.27 0.00 4.01
26 27 3.818210 TGAACACACGTGATTTATGGCTT 59.182 39.130 25.01 0.51 0.00 4.35
27 28 3.188460 GTGAACACACGTGATTTATGGCT 59.812 43.478 25.01 1.05 0.00 4.75
28 29 3.058570 TGTGAACACACGTGATTTATGGC 60.059 43.478 25.01 6.89 36.21 4.40
29 30 4.740741 TGTGAACACACGTGATTTATGG 57.259 40.909 25.01 4.79 36.21 2.74
30 31 7.443218 TTTTTGTGAACACACGTGATTTATG 57.557 32.000 25.01 12.24 41.67 1.90
52 53 5.748152 TCGTTTACTTAGTGTGCGTACTTTT 59.252 36.000 4.97 0.00 32.19 2.27
54 55 4.858935 TCGTTTACTTAGTGTGCGTACTT 58.141 39.130 4.97 0.00 32.19 2.24
56 57 4.030977 CCATCGTTTACTTAGTGTGCGTAC 59.969 45.833 0.00 0.00 0.00 3.67
57 58 4.168014 CCATCGTTTACTTAGTGTGCGTA 58.832 43.478 0.00 0.00 0.00 4.42
59 60 2.222729 GCCATCGTTTACTTAGTGTGCG 60.223 50.000 0.00 0.00 0.00 5.34
63 64 1.996898 TGCGCCATCGTTTACTTAGTG 59.003 47.619 4.18 0.00 38.14 2.74
66 67 2.894902 TGATGCGCCATCGTTTACTTA 58.105 42.857 4.18 0.00 43.14 2.24
67 68 1.732941 TGATGCGCCATCGTTTACTT 58.267 45.000 4.18 0.00 43.14 2.24
68 69 1.732941 TTGATGCGCCATCGTTTACT 58.267 45.000 4.18 0.00 43.14 2.24
69 70 2.031560 TGATTGATGCGCCATCGTTTAC 59.968 45.455 4.18 1.25 43.14 2.01
70 71 2.284190 TGATTGATGCGCCATCGTTTA 58.716 42.857 4.18 0.00 43.14 2.01
71 72 1.093972 TGATTGATGCGCCATCGTTT 58.906 45.000 4.18 0.00 43.14 3.60
72 73 1.093972 TTGATTGATGCGCCATCGTT 58.906 45.000 4.18 0.00 43.14 3.85
75 76 3.358707 TGATTTGATTGATGCGCCATC 57.641 42.857 4.18 8.92 40.88 3.51
76 77 3.450578 GTTGATTTGATTGATGCGCCAT 58.549 40.909 4.18 0.00 0.00 4.40
77 78 2.417107 GGTTGATTTGATTGATGCGCCA 60.417 45.455 4.18 0.00 0.00 5.69
78 79 2.195922 GGTTGATTTGATTGATGCGCC 58.804 47.619 4.18 0.00 0.00 6.53
79 80 2.599973 GTGGTTGATTTGATTGATGCGC 59.400 45.455 0.00 0.00 0.00 6.09
80 81 2.847717 CGTGGTTGATTTGATTGATGCG 59.152 45.455 0.00 0.00 0.00 4.73
81 82 2.599973 GCGTGGTTGATTTGATTGATGC 59.400 45.455 0.00 0.00 0.00 3.91
82 83 3.181397 GGCGTGGTTGATTTGATTGATG 58.819 45.455 0.00 0.00 0.00 3.07
83 84 2.824936 TGGCGTGGTTGATTTGATTGAT 59.175 40.909 0.00 0.00 0.00 2.57
86 87 2.824936 TCATGGCGTGGTTGATTTGATT 59.175 40.909 6.90 0.00 0.00 2.57
87 88 2.445427 TCATGGCGTGGTTGATTTGAT 58.555 42.857 6.90 0.00 0.00 2.57
88 89 1.902938 TCATGGCGTGGTTGATTTGA 58.097 45.000 6.90 0.00 0.00 2.69
89 90 2.945447 ATCATGGCGTGGTTGATTTG 57.055 45.000 6.90 0.00 0.00 2.32
147 148 2.290071 CGGAGGAACTTTTTGCCTAGGA 60.290 50.000 14.75 0.00 41.55 2.94
150 151 2.943036 ACGGAGGAACTTTTTGCCTA 57.057 45.000 0.00 0.00 41.55 3.93
152 153 1.199327 GCTACGGAGGAACTTTTTGCC 59.801 52.381 0.00 0.00 41.55 4.52
153 154 2.152016 AGCTACGGAGGAACTTTTTGC 58.848 47.619 0.00 0.00 41.55 3.68
154 155 2.412089 CGAGCTACGGAGGAACTTTTTG 59.588 50.000 0.00 0.00 41.55 2.44
156 157 1.891150 TCGAGCTACGGAGGAACTTTT 59.109 47.619 0.00 0.00 42.82 2.27
185 186 3.997021 CAGACGGATAAGATAATGGGCAC 59.003 47.826 0.00 0.00 0.00 5.01
187 188 4.273148 ACAGACGGATAAGATAATGGGC 57.727 45.455 0.00 0.00 0.00 5.36
212 213 4.492494 TCAGGTGCACATATCTCAATGT 57.508 40.909 20.43 0.00 40.75 2.71
224 225 3.191162 TGTTAATCATGCTTCAGGTGCAC 59.809 43.478 8.80 8.80 43.59 4.57
239 240 6.979817 TGCATGCAAAGGTTATGATGTTAATC 59.020 34.615 20.30 0.00 0.00 1.75
347 348 7.654116 TCCCACCGAAAATCTTTTTGTTTATTC 59.346 33.333 2.78 0.00 31.09 1.75
359 360 3.775316 ACAGTAGATCCCACCGAAAATCT 59.225 43.478 0.00 0.00 33.27 2.40
387 388 7.659652 AACTCAGTCTAAGAAAACTGCATAC 57.340 36.000 0.00 0.00 42.10 2.39
457 458 1.906574 ACATGGGACCTGATGTAACGT 59.093 47.619 7.65 0.00 30.86 3.99
460 461 2.845659 AGGACATGGGACCTGATGTAA 58.154 47.619 9.01 0.00 37.80 2.41
461 462 2.568546 AGGACATGGGACCTGATGTA 57.431 50.000 9.01 0.00 37.80 2.29
507 509 5.833406 TGTCTCTCATGATGTCTCTTCTC 57.167 43.478 0.00 0.00 0.00 2.87
521 523 9.784531 AAAAACTTTATCTCTGATTGTCTCTCA 57.215 29.630 0.00 0.00 0.00 3.27
551 555 2.420022 GTGTTGCATGCCGAGTTTCTAT 59.580 45.455 16.68 0.00 0.00 1.98
554 558 0.310543 TGTGTTGCATGCCGAGTTTC 59.689 50.000 16.68 0.00 0.00 2.78
569 579 2.280592 GGAGGCGACCGTTTGTGT 60.281 61.111 0.00 0.00 0.00 3.72
612 622 4.195416 GGTGCTCCTGGAATAGAAAAGAG 58.805 47.826 0.00 0.00 0.00 2.85
614 624 2.939103 CGGTGCTCCTGGAATAGAAAAG 59.061 50.000 2.85 0.00 0.00 2.27
632 644 0.106708 AACAGTGTCACATGCTCGGT 59.893 50.000 5.62 0.00 0.00 4.69
660 672 5.611796 TGTTTGACTCACACTAATCATGC 57.388 39.130 0.00 0.00 0.00 4.06
664 676 7.840342 ATCAGATGTTTGACTCACACTAATC 57.160 36.000 0.00 0.00 0.00 1.75
667 679 7.216494 TCAAATCAGATGTTTGACTCACACTA 58.784 34.615 0.00 0.00 39.81 2.74
668 680 6.057533 TCAAATCAGATGTTTGACTCACACT 58.942 36.000 0.00 0.00 39.81 3.55
671 683 5.049198 TGCTCAAATCAGATGTTTGACTCAC 60.049 40.000 0.00 0.00 39.81 3.51
672 684 5.049198 GTGCTCAAATCAGATGTTTGACTCA 60.049 40.000 0.00 0.00 39.81 3.41
673 685 5.049198 TGTGCTCAAATCAGATGTTTGACTC 60.049 40.000 0.00 0.00 39.81 3.36
674 686 4.823442 TGTGCTCAAATCAGATGTTTGACT 59.177 37.500 0.00 0.00 39.81 3.41
675 687 5.112220 TGTGCTCAAATCAGATGTTTGAC 57.888 39.130 0.00 0.00 39.81 3.18
677 689 4.326278 GCATGTGCTCAAATCAGATGTTTG 59.674 41.667 0.00 0.00 37.48 2.93
678 690 4.021807 TGCATGTGCTCAAATCAGATGTTT 60.022 37.500 6.55 0.00 42.66 2.83
680 692 3.086282 TGCATGTGCTCAAATCAGATGT 58.914 40.909 6.55 0.00 42.66 3.06
681 693 3.775661 TGCATGTGCTCAAATCAGATG 57.224 42.857 6.55 0.00 42.66 2.90
683 695 2.686405 GGATGCATGTGCTCAAATCAGA 59.314 45.455 2.46 0.00 42.66 3.27
684 696 2.688446 AGGATGCATGTGCTCAAATCAG 59.312 45.455 2.46 0.00 42.66 2.90
685 697 2.686405 GAGGATGCATGTGCTCAAATCA 59.314 45.455 2.46 0.00 42.66 2.57
686 698 2.034305 GGAGGATGCATGTGCTCAAATC 59.966 50.000 2.46 1.03 42.66 2.17
687 699 2.029623 GGAGGATGCATGTGCTCAAAT 58.970 47.619 2.46 0.00 42.66 2.32
688 700 1.466856 GGAGGATGCATGTGCTCAAA 58.533 50.000 2.46 0.00 42.66 2.69
690 702 1.153309 CGGAGGATGCATGTGCTCA 60.153 57.895 2.46 0.00 42.66 4.26
691 703 3.728474 CGGAGGATGCATGTGCTC 58.272 61.111 2.46 1.23 42.66 4.26
704 716 2.104859 CAGTGCAGTGCATCCGGAG 61.105 63.158 22.87 3.17 41.91 4.63
707 719 1.208358 CAACAGTGCAGTGCATCCG 59.792 57.895 22.87 14.82 41.91 4.18
709 721 0.946528 TGTCAACAGTGCAGTGCATC 59.053 50.000 22.87 14.73 41.91 3.91
713 725 1.941975 TGACATGTCAACAGTGCAGTG 59.058 47.619 26.02 20.11 36.53 3.66
738 760 4.858850 AGTCCCATTGAGATATGTGCAAA 58.141 39.130 0.00 0.00 0.00 3.68
792 814 7.451877 CCTAGGAGAGTGGTTTTATATAGCTCA 59.548 40.741 1.05 0.00 0.00 4.26
839 861 1.004862 TGTTGGTTGTTGTGGTGAGGA 59.995 47.619 0.00 0.00 0.00 3.71
840 862 1.468985 TGTTGGTTGTTGTGGTGAGG 58.531 50.000 0.00 0.00 0.00 3.86
841 863 2.735126 GCTTGTTGGTTGTTGTGGTGAG 60.735 50.000 0.00 0.00 0.00 3.51
842 864 1.203523 GCTTGTTGGTTGTTGTGGTGA 59.796 47.619 0.00 0.00 0.00 4.02
843 865 1.204467 AGCTTGTTGGTTGTTGTGGTG 59.796 47.619 0.00 0.00 0.00 4.17
845 867 2.270047 CAAGCTTGTTGGTTGTTGTGG 58.730 47.619 18.65 0.00 45.89 4.17
872 3041 0.820871 AGGAGATCGGTCAGTGAAGC 59.179 55.000 0.00 0.00 0.00 3.86
936 3108 1.301423 GAGTGCTACCTCTCGTCGAT 58.699 55.000 0.00 0.00 0.00 3.59
940 3112 1.316706 GGCTGAGTGCTACCTCTCGT 61.317 60.000 0.00 0.00 42.39 4.18
946 3118 4.082523 TGCCGGCTGAGTGCTACC 62.083 66.667 29.70 0.00 42.39 3.18
1036 3210 1.568504 ATCCTCCTGCCGAAGTAACA 58.431 50.000 0.00 0.00 0.00 2.41
1042 3216 1.757118 CTTCACTATCCTCCTGCCGAA 59.243 52.381 0.00 0.00 0.00 4.30
1131 3305 1.217511 CGACAGCAGCATCTGGAGT 59.782 57.895 9.55 0.00 38.36 3.85
1214 3388 2.338620 CGTCCACCTGCTTCACGA 59.661 61.111 0.00 0.00 32.08 4.35
1313 3487 2.227194 CTACCATAACATTTCCGGCCC 58.773 52.381 0.00 0.00 0.00 5.80
1328 3506 2.457598 CCAGAGTGAGTTAGCCTACCA 58.542 52.381 0.00 0.00 0.00 3.25
1362 3540 9.167311 GAAATGGATATTGTGTGAGAGTTACTT 57.833 33.333 0.00 0.00 0.00 2.24
1364 3542 7.491372 TCGAAATGGATATTGTGTGAGAGTTAC 59.509 37.037 0.00 0.00 0.00 2.50
1365 3543 7.552459 TCGAAATGGATATTGTGTGAGAGTTA 58.448 34.615 0.00 0.00 0.00 2.24
1366 3544 6.406370 TCGAAATGGATATTGTGTGAGAGTT 58.594 36.000 0.00 0.00 0.00 3.01
1367 3545 5.977635 TCGAAATGGATATTGTGTGAGAGT 58.022 37.500 0.00 0.00 0.00 3.24
1369 3547 6.639563 TCTTCGAAATGGATATTGTGTGAGA 58.360 36.000 0.00 0.00 0.00 3.27
1373 3891 6.878317 TCTCTCTTCGAAATGGATATTGTGT 58.122 36.000 0.00 0.00 0.00 3.72
1430 3953 7.793927 AAAACAACACCAGAAAAGAAAAACA 57.206 28.000 0.00 0.00 0.00 2.83
1474 3997 7.462109 TCATGAATTTAAGCACACACAAAAC 57.538 32.000 0.00 0.00 0.00 2.43
1855 4383 6.264292 TCAGTCGAATTCCTTTCAAAAATCCA 59.736 34.615 0.00 0.00 33.66 3.41
1891 4420 2.417651 CGGTATCTTTCCGCCAGTGTTA 60.418 50.000 0.00 0.00 41.48 2.41
1897 4426 0.531974 GCATCGGTATCTTTCCGCCA 60.532 55.000 0.00 0.00 46.49 5.69
1907 4436 1.203994 GCCGGTACTATGCATCGGTAT 59.796 52.381 20.83 0.54 42.35 2.73
1951 4480 6.422333 TCCCAGACTGTGCATCAAATTAATA 58.578 36.000 0.93 0.00 0.00 0.98
1954 4483 4.299586 TCCCAGACTGTGCATCAAATTA 57.700 40.909 0.93 0.00 0.00 1.40
1966 4495 5.823045 GGTAACCTCATTTTATCCCAGACTG 59.177 44.000 0.00 0.00 0.00 3.51
1969 4498 6.395780 TTGGTAACCTCATTTTATCCCAGA 57.604 37.500 0.00 0.00 0.00 3.86
2003 4532 2.642171 TGTCTCTGAACCCCATACCT 57.358 50.000 0.00 0.00 0.00 3.08
2021 4550 1.398390 GCCTGGTTAAACGCTCTCATG 59.602 52.381 0.00 0.00 0.00 3.07
2066 4595 5.669477 AGACTTTCAGGAGTATCAATGAGC 58.331 41.667 0.00 0.00 34.48 4.26
2129 4658 4.011698 GGAAAACCGTATCCAAAAGGCTA 58.988 43.478 0.00 0.00 35.71 3.93
2156 4685 4.323477 CAAACCGCCGACCCCTGA 62.323 66.667 0.00 0.00 0.00 3.86
2171 4700 4.667858 AGGCCATGTAATATACCCTTCCAA 59.332 41.667 5.01 0.00 0.00 3.53
2198 4727 7.175104 TCCAAATAACTCCTGTCTTTAGCAAT 58.825 34.615 0.00 0.00 0.00 3.56
2223 4752 0.542702 CTTGAACCATTGCCCACCCT 60.543 55.000 0.00 0.00 0.00 4.34
2225 4754 1.917872 TACTTGAACCATTGCCCACC 58.082 50.000 0.00 0.00 0.00 4.61
2256 4785 3.027412 CTCTAGGTATCCATGGATCCCG 58.973 54.545 30.61 21.18 35.99 5.14
2273 4802 3.422796 AGGTCTGAACGAAGAAGCTCTA 58.577 45.455 0.00 0.00 0.00 2.43
2279 4808 5.713389 TGGAGTTATAGGTCTGAACGAAGAA 59.287 40.000 0.00 0.00 0.00 2.52
2312 4841 4.876679 TCAGAGACACGATTTAGACGAGAT 59.123 41.667 0.00 0.00 34.70 2.75
2488 5018 7.119709 TGTAGCCAACTTATATGCACTCTTA 57.880 36.000 0.00 0.00 0.00 2.10
2497 5027 5.989477 TGAGCACTTGTAGCCAACTTATAT 58.011 37.500 0.00 0.00 0.00 0.86
2537 5067 1.760086 CGTCAGAGGATGAGCCCCT 60.760 63.158 0.00 0.00 39.07 4.79
2542 5072 4.035278 GTTAGGAACGTCAGAGGATGAG 57.965 50.000 0.00 0.00 39.07 2.90
2560 5090 1.067060 CAGATGGATCTCGTGCCGTTA 59.933 52.381 0.00 0.00 34.22 3.18
2575 5105 4.916983 TTTCCAAACACAGTTCCAGATG 57.083 40.909 0.00 0.00 0.00 2.90
2599 5129 0.037326 TCATCTTCTGTGGCACCGAC 60.037 55.000 16.26 0.00 0.00 4.79
2629 5159 0.178935 CCCCAACCACCACTTTCCAT 60.179 55.000 0.00 0.00 0.00 3.41
2686 5216 1.086634 GGCAGGTAGAGCGCTTTGAG 61.087 60.000 13.26 0.85 0.00 3.02
2710 5240 0.487325 TCTCCTCCTCCAGACCACAA 59.513 55.000 0.00 0.00 0.00 3.33
2717 5247 2.433970 GGAACTCATTCTCCTCCTCCAG 59.566 54.545 0.00 0.00 34.98 3.86
2763 5293 2.280119 GTGTCCACAGAGCACGCA 60.280 61.111 0.00 0.00 0.00 5.24
2858 5388 0.035152 ACCTGATCCGAGCATTGCAA 60.035 50.000 11.91 0.00 0.00 4.08
2954 5491 2.967076 CACTGTCGCCTGCGTTGT 60.967 61.111 11.68 6.26 40.74 3.32
2960 5497 1.215647 GGTACTCCACTGTCGCCTG 59.784 63.158 0.00 0.00 0.00 4.85
2965 5502 3.633418 ACTATCCAGGTACTCCACTGTC 58.367 50.000 0.00 0.00 34.60 3.51
3013 5550 1.593196 TTTCTTCTGTGGTGAAGCGG 58.407 50.000 0.00 0.00 42.15 5.52
3019 5556 7.703058 ACCCTTTATTATTTCTTCTGTGGTG 57.297 36.000 0.00 0.00 0.00 4.17
3077 5615 1.660560 GGCGCAGGTTGCTTGATGAT 61.661 55.000 10.83 0.00 42.25 2.45
3078 5616 2.334946 GGCGCAGGTTGCTTGATGA 61.335 57.895 10.83 0.00 42.25 2.92
3136 5680 1.611491 TGCCGAAAAGAACCATCAACC 59.389 47.619 0.00 0.00 0.00 3.77
3168 5712 1.002659 ACACAATACCGGTTGCTGCTA 59.997 47.619 15.04 0.00 32.32 3.49
3201 5745 2.954318 GCCGAGAGTAACACCATACCTA 59.046 50.000 0.00 0.00 0.00 3.08
3253 5798 4.232905 TGGACCTCCACCTCCAAG 57.767 61.111 0.00 0.00 42.01 3.61
3293 5838 1.900237 GCTGCGTTTTGAATAGCCAG 58.100 50.000 0.00 0.00 0.00 4.85
3318 5863 1.148273 TCTGACTGCACAACCACCC 59.852 57.895 0.00 0.00 0.00 4.61
3439 5986 6.815089 ACTCCTATGTAATTTCTGAGCTGAG 58.185 40.000 0.00 0.00 0.00 3.35
3443 5990 6.810911 TCTGACTCCTATGTAATTTCTGAGC 58.189 40.000 0.00 0.00 0.00 4.26
3458 6005 3.834813 TCTGCAACACTATTCTGACTCCT 59.165 43.478 0.00 0.00 0.00 3.69
3528 6075 2.169832 ACATGGTGGAAACGAGTGAG 57.830 50.000 0.00 0.00 0.00 3.51
3536 6086 4.649267 TGTCCTCAATACATGGTGGAAA 57.351 40.909 0.00 0.00 35.13 3.13
3593 6147 1.271379 GCGGGGTAAAAGGGAGTTTTG 59.729 52.381 0.00 0.00 38.85 2.44
3628 6182 4.512571 GCAAGGACTGTGCATCAAATTTTT 59.487 37.500 1.24 0.00 41.80 1.94
3629 6183 4.060205 GCAAGGACTGTGCATCAAATTTT 58.940 39.130 1.24 0.00 41.80 1.82
3630 6184 3.069872 TGCAAGGACTGTGCATCAAATTT 59.930 39.130 1.24 0.00 46.76 1.82
3631 6185 2.629137 TGCAAGGACTGTGCATCAAATT 59.371 40.909 1.24 0.00 46.76 1.82
3633 6187 1.689984 TGCAAGGACTGTGCATCAAA 58.310 45.000 1.24 0.00 46.76 2.69
3634 6188 3.418022 TGCAAGGACTGTGCATCAA 57.582 47.368 1.24 0.00 46.76 2.57
3656 6210 6.579666 TTAGAGCTCTGTGCATCAATTTTT 57.420 33.333 26.78 0.00 45.94 1.94
3657 6211 6.579666 TTTAGAGCTCTGTGCATCAATTTT 57.420 33.333 26.78 0.00 45.94 1.82
3658 6212 6.770746 ATTTAGAGCTCTGTGCATCAATTT 57.229 33.333 26.78 0.00 45.94 1.82
4214 6768 5.415701 TCTGCAAATGAACCAGGTTATCTTC 59.584 40.000 4.25 0.00 0.00 2.87
4376 6933 1.372087 GGTAGAAAGCGCTGCATGCT 61.372 55.000 20.33 0.82 46.68 3.79
4387 6944 3.190874 GCCGAACTCAGATGGTAGAAAG 58.809 50.000 0.00 0.00 0.00 2.62
4390 6947 1.847328 TGCCGAACTCAGATGGTAGA 58.153 50.000 0.00 0.00 0.00 2.59
4526 7083 3.820467 ACAAAGTAAGCAGCAATGCAGTA 59.180 39.130 8.35 0.00 37.25 2.74
4532 7089 5.048013 GGTTAGGAACAAAGTAAGCAGCAAT 60.048 40.000 0.00 0.00 0.00 3.56
4688 7248 1.750193 TTTGAAGGGAGCGGCATAAG 58.250 50.000 1.45 0.00 0.00 1.73
4735 7295 8.949177 CATCCATAAATATTGCTGCATAGTACA 58.051 33.333 1.84 0.00 0.00 2.90
4810 7370 1.611519 TTGTCTTGTTTAAGGCCCGG 58.388 50.000 0.00 0.00 37.74 5.73
4836 7396 7.383102 ACAAATGGCTCATTTTCTACTAGTG 57.617 36.000 5.39 0.00 40.60 2.74
4838 7398 6.038714 GGGACAAATGGCTCATTTTCTACTAG 59.961 42.308 9.58 0.00 40.60 2.57
4839 7399 5.885912 GGGACAAATGGCTCATTTTCTACTA 59.114 40.000 9.58 0.00 40.60 1.82
4841 7401 4.438744 CGGGACAAATGGCTCATTTTCTAC 60.439 45.833 9.58 1.58 40.60 2.59
4842 7402 3.694072 CGGGACAAATGGCTCATTTTCTA 59.306 43.478 9.58 0.00 40.60 2.10
4843 7403 2.493278 CGGGACAAATGGCTCATTTTCT 59.507 45.455 9.58 0.83 40.60 2.52
4844 7404 2.417243 CCGGGACAAATGGCTCATTTTC 60.417 50.000 9.58 10.19 40.60 2.29
4845 7405 1.550072 CCGGGACAAATGGCTCATTTT 59.450 47.619 9.58 3.91 40.60 1.82
4846 7406 1.185315 CCGGGACAAATGGCTCATTT 58.815 50.000 0.00 7.18 43.71 2.32
4847 7407 0.039618 ACCGGGACAAATGGCTCATT 59.960 50.000 6.32 0.00 35.39 2.57
4849 7409 0.178975 AAACCGGGACAAATGGCTCA 60.179 50.000 6.32 0.00 0.00 4.26
4850 7410 0.526211 GAAACCGGGACAAATGGCTC 59.474 55.000 6.32 0.00 0.00 4.70
4852 7412 0.243636 CTGAAACCGGGACAAATGGC 59.756 55.000 6.32 0.00 0.00 4.40
4853 7413 1.812571 CTCTGAAACCGGGACAAATGG 59.187 52.381 6.32 0.00 0.00 3.16
4854 7414 1.812571 CCTCTGAAACCGGGACAAATG 59.187 52.381 6.32 0.00 0.00 2.32
4855 7415 1.271926 CCCTCTGAAACCGGGACAAAT 60.272 52.381 6.32 0.00 40.55 2.32
4856 7416 0.109723 CCCTCTGAAACCGGGACAAA 59.890 55.000 6.32 0.00 40.55 2.83
4857 7417 0.765135 TCCCTCTGAAACCGGGACAA 60.765 55.000 6.32 0.00 41.95 3.18
4858 7418 1.152204 TCCCTCTGAAACCGGGACA 60.152 57.895 6.32 1.44 41.95 4.02
4859 7419 3.801620 TCCCTCTGAAACCGGGAC 58.198 61.111 6.32 0.00 41.95 4.46
4860 7420 0.473117 AAGTCCCTCTGAAACCGGGA 60.473 55.000 6.32 0.00 44.52 5.14
4861 7421 0.400594 AAAGTCCCTCTGAAACCGGG 59.599 55.000 6.32 0.00 39.41 5.73
4862 7422 2.302157 ACTAAAGTCCCTCTGAAACCGG 59.698 50.000 0.00 0.00 0.00 5.28
4863 7423 3.258622 AGACTAAAGTCCCTCTGAAACCG 59.741 47.826 6.50 0.00 45.85 4.44
4864 7424 4.618693 CGAGACTAAAGTCCCTCTGAAACC 60.619 50.000 6.50 0.00 45.85 3.27
4865 7425 4.487019 CGAGACTAAAGTCCCTCTGAAAC 58.513 47.826 6.50 0.00 45.85 2.78
4866 7426 3.510360 CCGAGACTAAAGTCCCTCTGAAA 59.490 47.826 6.50 0.00 45.85 2.69
4867 7427 3.090037 CCGAGACTAAAGTCCCTCTGAA 58.910 50.000 6.50 0.00 45.85 3.02
4868 7428 2.041350 ACCGAGACTAAAGTCCCTCTGA 59.959 50.000 6.50 0.00 45.85 3.27
4869 7429 2.448453 ACCGAGACTAAAGTCCCTCTG 58.552 52.381 6.50 0.00 45.85 3.35
4870 7430 2.903375 ACCGAGACTAAAGTCCCTCT 57.097 50.000 6.50 0.00 45.85 3.69
4871 7431 3.090790 AGAACCGAGACTAAAGTCCCTC 58.909 50.000 6.50 0.00 45.85 4.30
4872 7432 2.826725 CAGAACCGAGACTAAAGTCCCT 59.173 50.000 6.50 0.00 45.85 4.20
4873 7433 2.094130 CCAGAACCGAGACTAAAGTCCC 60.094 54.545 6.50 0.00 45.85 4.46
4874 7434 2.824341 TCCAGAACCGAGACTAAAGTCC 59.176 50.000 6.50 0.00 45.85 3.85
4875 7435 4.236147 GTTCCAGAACCGAGACTAAAGTC 58.764 47.826 1.72 1.72 39.00 3.01
4876 7436 4.254402 GTTCCAGAACCGAGACTAAAGT 57.746 45.455 0.00 0.00 35.36 2.66
4888 7448 4.141779 ACATATTAGTCCCGGTTCCAGAAC 60.142 45.833 0.00 1.77 40.45 3.01
4889 7449 4.035112 ACATATTAGTCCCGGTTCCAGAA 58.965 43.478 0.00 0.00 0.00 3.02
4890 7450 3.649843 ACATATTAGTCCCGGTTCCAGA 58.350 45.455 0.00 0.00 0.00 3.86
4891 7451 4.127171 CAACATATTAGTCCCGGTTCCAG 58.873 47.826 0.00 0.00 0.00 3.86
4892 7452 3.775866 TCAACATATTAGTCCCGGTTCCA 59.224 43.478 0.00 0.00 0.00 3.53
4893 7453 4.100498 TCTCAACATATTAGTCCCGGTTCC 59.900 45.833 0.00 0.00 0.00 3.62
4894 7454 5.048507 GTCTCAACATATTAGTCCCGGTTC 58.951 45.833 0.00 0.00 0.00 3.62
4895 7455 4.715297 AGTCTCAACATATTAGTCCCGGTT 59.285 41.667 0.00 0.00 0.00 4.44
4896 7456 4.287552 AGTCTCAACATATTAGTCCCGGT 58.712 43.478 0.00 0.00 0.00 5.28
4897 7457 4.939052 AGTCTCAACATATTAGTCCCGG 57.061 45.455 0.00 0.00 0.00 5.73
4898 7458 6.421202 GCTTTAGTCTCAACATATTAGTCCCG 59.579 42.308 0.00 0.00 0.00 5.14
4899 7459 6.706716 GGCTTTAGTCTCAACATATTAGTCCC 59.293 42.308 0.00 0.00 0.00 4.46
4900 7460 6.706716 GGGCTTTAGTCTCAACATATTAGTCC 59.293 42.308 0.00 0.00 0.00 3.85
4901 7461 7.272978 TGGGCTTTAGTCTCAACATATTAGTC 58.727 38.462 0.00 0.00 0.00 2.59
4902 7462 7.195374 TGGGCTTTAGTCTCAACATATTAGT 57.805 36.000 0.00 0.00 0.00 2.24
4903 7463 8.506168 TTTGGGCTTTAGTCTCAACATATTAG 57.494 34.615 0.00 0.00 0.00 1.73
4904 7464 8.736244 GTTTTGGGCTTTAGTCTCAACATATTA 58.264 33.333 0.00 0.00 0.00 0.98
4905 7465 7.309805 GGTTTTGGGCTTTAGTCTCAACATATT 60.310 37.037 0.00 0.00 0.00 1.28
4906 7466 6.152831 GGTTTTGGGCTTTAGTCTCAACATAT 59.847 38.462 0.00 0.00 0.00 1.78
4907 7467 5.475564 GGTTTTGGGCTTTAGTCTCAACATA 59.524 40.000 0.00 0.00 0.00 2.29
4908 7468 4.280929 GGTTTTGGGCTTTAGTCTCAACAT 59.719 41.667 0.00 0.00 0.00 2.71
4909 7469 3.634910 GGTTTTGGGCTTTAGTCTCAACA 59.365 43.478 0.00 0.00 0.00 3.33
4910 7470 3.889538 AGGTTTTGGGCTTTAGTCTCAAC 59.110 43.478 0.00 0.00 0.00 3.18
4911 7471 4.178956 AGGTTTTGGGCTTTAGTCTCAA 57.821 40.909 0.00 0.00 0.00 3.02
4912 7472 3.876309 AGGTTTTGGGCTTTAGTCTCA 57.124 42.857 0.00 0.00 0.00 3.27
4913 7473 6.644248 TTAAAGGTTTTGGGCTTTAGTCTC 57.356 37.500 0.00 0.00 0.00 3.36
4914 7474 6.210784 GGATTAAAGGTTTTGGGCTTTAGTCT 59.789 38.462 0.70 0.00 32.40 3.24
4915 7475 6.395629 GGATTAAAGGTTTTGGGCTTTAGTC 58.604 40.000 0.00 0.00 31.59 2.59
4916 7476 5.247564 GGGATTAAAGGTTTTGGGCTTTAGT 59.752 40.000 0.00 0.00 0.00 2.24
4917 7477 5.623596 CGGGATTAAAGGTTTTGGGCTTTAG 60.624 44.000 0.00 0.00 0.00 1.85
4918 7478 4.221041 CGGGATTAAAGGTTTTGGGCTTTA 59.779 41.667 0.00 0.00 0.00 1.85
4919 7479 3.007506 CGGGATTAAAGGTTTTGGGCTTT 59.992 43.478 0.00 0.00 0.00 3.51
4920 7480 2.565391 CGGGATTAAAGGTTTTGGGCTT 59.435 45.455 0.00 0.00 0.00 4.35
4921 7481 2.176045 CGGGATTAAAGGTTTTGGGCT 58.824 47.619 0.00 0.00 0.00 5.19
4922 7482 1.206132 CCGGGATTAAAGGTTTTGGGC 59.794 52.381 0.00 0.00 0.00 5.36
4923 7483 2.531771 ACCGGGATTAAAGGTTTTGGG 58.468 47.619 6.32 0.00 33.96 4.12
4929 7489 0.616891 AGCGAACCGGGATTAAAGGT 59.383 50.000 6.32 0.00 40.50 3.50
4930 7490 1.746470 AAGCGAACCGGGATTAAAGG 58.254 50.000 6.32 0.00 0.00 3.11
4931 7491 2.283351 CGTAAGCGAACCGGGATTAAAG 59.717 50.000 6.32 0.00 41.33 1.85
4932 7492 2.094286 TCGTAAGCGAACCGGGATTAAA 60.094 45.455 6.32 0.00 44.92 1.52
4933 7493 1.476085 TCGTAAGCGAACCGGGATTAA 59.524 47.619 6.32 0.00 44.92 1.40
4934 7494 1.102154 TCGTAAGCGAACCGGGATTA 58.898 50.000 6.32 0.00 44.92 1.75
4935 7495 1.892338 TCGTAAGCGAACCGGGATT 59.108 52.632 6.32 0.00 44.92 3.01
4936 7496 3.607163 TCGTAAGCGAACCGGGAT 58.393 55.556 6.32 0.00 44.92 3.85
4946 7506 1.129811 CATTTGTCCCGGTTCGTAAGC 59.870 52.381 0.00 0.00 37.18 3.09
4947 7507 2.690786 TCATTTGTCCCGGTTCGTAAG 58.309 47.619 0.00 0.00 0.00 2.34
4948 7508 2.835580 TCATTTGTCCCGGTTCGTAA 57.164 45.000 0.00 0.00 0.00 3.18
4949 7509 2.623535 CATCATTTGTCCCGGTTCGTA 58.376 47.619 0.00 0.00 0.00 3.43
4950 7510 1.448985 CATCATTTGTCCCGGTTCGT 58.551 50.000 0.00 0.00 0.00 3.85
4951 7511 0.098728 GCATCATTTGTCCCGGTTCG 59.901 55.000 0.00 0.00 0.00 3.95
4952 7512 1.401905 GAGCATCATTTGTCCCGGTTC 59.598 52.381 0.00 0.00 33.17 3.62
4953 7513 1.463674 GAGCATCATTTGTCCCGGTT 58.536 50.000 0.00 0.00 33.17 4.44
4954 7514 0.394352 GGAGCATCATTTGTCCCGGT 60.394 55.000 0.00 0.00 36.25 5.28
4955 7515 0.394216 TGGAGCATCATTTGTCCCGG 60.394 55.000 0.00 0.00 36.25 5.73
4956 7516 0.734889 GTGGAGCATCATTTGTCCCG 59.265 55.000 0.00 0.00 36.25 5.14
4957 7517 0.734889 CGTGGAGCATCATTTGTCCC 59.265 55.000 0.00 0.00 36.25 4.46
4958 7518 1.131126 CACGTGGAGCATCATTTGTCC 59.869 52.381 7.95 0.00 36.25 4.02
4959 7519 1.131126 CCACGTGGAGCATCATTTGTC 59.869 52.381 31.31 0.00 36.25 3.18
4960 7520 1.167851 CCACGTGGAGCATCATTTGT 58.832 50.000 31.31 0.00 36.25 2.83
4961 7521 0.179156 GCCACGTGGAGCATCATTTG 60.179 55.000 38.30 7.23 36.25 2.32
4962 7522 1.315257 GGCCACGTGGAGCATCATTT 61.315 55.000 38.30 0.00 36.25 2.32
4963 7523 1.750399 GGCCACGTGGAGCATCATT 60.750 57.895 38.30 0.00 36.25 2.57
4964 7524 2.124570 GGCCACGTGGAGCATCAT 60.125 61.111 38.30 0.00 36.25 2.45
4965 7525 4.758251 CGGCCACGTGGAGCATCA 62.758 66.667 38.30 0.00 37.39 3.07
4982 7542 3.248446 TACCTGGGCTCACCGCAAC 62.248 63.158 0.00 0.00 44.64 4.17
4983 7543 2.925706 TACCTGGGCTCACCGCAA 60.926 61.111 0.00 0.00 44.64 4.85
4984 7544 3.390521 CTACCTGGGCTCACCGCA 61.391 66.667 0.00 0.00 44.64 5.69
4985 7545 2.579684 CTTCTACCTGGGCTCACCGC 62.580 65.000 0.00 0.00 44.64 5.68
4986 7546 1.517832 CTTCTACCTGGGCTCACCG 59.482 63.158 0.00 0.00 44.64 4.94
4987 7547 1.627297 CCCTTCTACCTGGGCTCACC 61.627 65.000 0.00 0.00 36.61 4.02
4988 7548 1.908483 CCCTTCTACCTGGGCTCAC 59.092 63.158 0.00 0.00 36.61 3.51
4989 7549 4.480480 CCCTTCTACCTGGGCTCA 57.520 61.111 0.00 0.00 36.61 4.26
4993 7553 1.490910 CTAAAGGCCCTTCTACCTGGG 59.509 57.143 0.00 0.00 46.00 4.45
4994 7554 2.170817 GACTAAAGGCCCTTCTACCTGG 59.829 54.545 0.00 0.00 36.07 4.45
4995 7555 2.170817 GGACTAAAGGCCCTTCTACCTG 59.829 54.545 0.00 0.00 36.07 4.00
4996 7556 2.046025 AGGACTAAAGGCCCTTCTACCT 59.954 50.000 0.00 1.06 38.14 3.08
4997 7557 2.170817 CAGGACTAAAGGCCCTTCTACC 59.829 54.545 0.00 0.00 0.00 3.18
4998 7558 2.170817 CCAGGACTAAAGGCCCTTCTAC 59.829 54.545 0.00 0.00 0.00 2.59
4999 7559 2.225805 ACCAGGACTAAAGGCCCTTCTA 60.226 50.000 0.00 0.00 0.00 2.10
5000 7560 1.290134 CCAGGACTAAAGGCCCTTCT 58.710 55.000 0.00 0.00 0.00 2.85
5001 7561 0.992695 ACCAGGACTAAAGGCCCTTC 59.007 55.000 0.00 0.00 0.00 3.46
5002 7562 1.456919 AACCAGGACTAAAGGCCCTT 58.543 50.000 0.00 0.00 0.00 3.95
5003 7563 2.197465 CTAACCAGGACTAAAGGCCCT 58.803 52.381 0.00 0.00 0.00 5.19
5004 7564 1.914108 ACTAACCAGGACTAAAGGCCC 59.086 52.381 0.00 0.00 0.00 5.80
5005 7565 4.019950 TGTTACTAACCAGGACTAAAGGCC 60.020 45.833 0.00 0.00 0.00 5.19
5006 7566 4.934001 GTGTTACTAACCAGGACTAAAGGC 59.066 45.833 0.00 0.00 0.00 4.35
5007 7567 5.012354 TGGTGTTACTAACCAGGACTAAAGG 59.988 44.000 0.00 0.00 42.82 3.11
5008 7568 6.105397 TGGTGTTACTAACCAGGACTAAAG 57.895 41.667 0.00 0.00 42.82 1.85
5019 7579 2.416747 GTCCCGGTTGGTGTTACTAAC 58.583 52.381 0.00 0.25 38.63 2.34
5020 7580 1.347378 GGTCCCGGTTGGTGTTACTAA 59.653 52.381 0.00 0.00 34.77 2.24
5021 7581 0.975887 GGTCCCGGTTGGTGTTACTA 59.024 55.000 0.00 0.00 34.77 1.82
5022 7582 1.055551 TGGTCCCGGTTGGTGTTACT 61.056 55.000 0.00 0.00 34.77 2.24
5023 7583 0.179023 TTGGTCCCGGTTGGTGTTAC 60.179 55.000 0.00 0.00 34.77 2.50
5024 7584 0.549950 TTTGGTCCCGGTTGGTGTTA 59.450 50.000 0.00 0.00 34.77 2.41
5025 7585 0.105913 ATTTGGTCCCGGTTGGTGTT 60.106 50.000 0.00 0.00 34.77 3.32
5026 7586 0.825840 CATTTGGTCCCGGTTGGTGT 60.826 55.000 0.00 0.00 34.77 4.16
5027 7587 0.538516 TCATTTGGTCCCGGTTGGTG 60.539 55.000 0.00 0.00 34.77 4.17
5028 7588 0.538746 GTCATTTGGTCCCGGTTGGT 60.539 55.000 0.00 0.00 34.77 3.67
5029 7589 0.538516 TGTCATTTGGTCCCGGTTGG 60.539 55.000 0.00 0.00 0.00 3.77
5030 7590 1.472480 GATGTCATTTGGTCCCGGTTG 59.528 52.381 0.00 0.00 0.00 3.77
5031 7591 1.615919 GGATGTCATTTGGTCCCGGTT 60.616 52.381 0.00 0.00 0.00 4.44
5032 7592 0.034477 GGATGTCATTTGGTCCCGGT 60.034 55.000 0.00 0.00 0.00 5.28
5033 7593 0.034574 TGGATGTCATTTGGTCCCGG 60.035 55.000 0.00 0.00 0.00 5.73
5034 7594 1.094785 GTGGATGTCATTTGGTCCCG 58.905 55.000 0.00 0.00 0.00 5.14
5035 7595 1.094785 CGTGGATGTCATTTGGTCCC 58.905 55.000 0.00 0.00 0.00 4.46
5036 7596 1.468520 CACGTGGATGTCATTTGGTCC 59.531 52.381 7.95 0.00 0.00 4.46
5037 7597 2.151202 ACACGTGGATGTCATTTGGTC 58.849 47.619 21.57 0.00 0.00 4.02
5038 7598 2.151202 GACACGTGGATGTCATTTGGT 58.849 47.619 21.57 0.00 46.89 3.67
5039 7599 2.900122 GACACGTGGATGTCATTTGG 57.100 50.000 21.57 0.00 46.89 3.28
5046 7606 1.669115 GCTGCTGACACGTGGATGT 60.669 57.895 21.57 0.00 34.78 3.06
5047 7607 1.357258 GAGCTGCTGACACGTGGATG 61.357 60.000 21.57 9.87 0.00 3.51
5048 7608 1.079543 GAGCTGCTGACACGTGGAT 60.080 57.895 21.57 0.00 0.00 3.41
5049 7609 2.340078 GAGCTGCTGACACGTGGA 59.660 61.111 21.57 4.84 0.00 4.02
5050 7610 2.025969 CTGAGCTGCTGACACGTGG 61.026 63.158 21.57 2.89 0.00 4.94
5051 7611 2.025969 CCTGAGCTGCTGACACGTG 61.026 63.158 15.48 15.48 0.00 4.49
5052 7612 2.341543 CCTGAGCTGCTGACACGT 59.658 61.111 7.01 0.00 0.00 4.49
5127 7687 1.860906 ACCCTCCAAAAACCCCTAACA 59.139 47.619 0.00 0.00 0.00 2.41
5215 7777 1.878522 GCGTCGATCAAGCACGGAT 60.879 57.895 0.00 0.00 34.04 4.18
5226 7788 0.381089 GTGTGGTAGCTAGCGTCGAT 59.619 55.000 17.59 0.00 0.00 3.59
5313 7883 8.409371 TCACTTCTCTCTGTATATGTTCATCAC 58.591 37.037 0.00 0.00 0.00 3.06
5477 8055 8.989980 CATCTTAAATAAAGACCGAGAATACCC 58.010 37.037 0.00 0.00 46.90 3.69
5487 8065 9.974980 TTTTTGACCACATCTTAAATAAAGACC 57.025 29.630 0.00 0.00 46.90 3.85
5499 8077 4.219288 GCAGGATTCTTTTTGACCACATCT 59.781 41.667 0.00 0.00 0.00 2.90
5721 11017 0.177141 TCGACAAATCTAAGCGGGGG 59.823 55.000 0.00 0.00 0.00 5.40
5722 11018 1.134788 ACTCGACAAATCTAAGCGGGG 60.135 52.381 0.00 0.00 0.00 5.73
5723 11019 2.295253 ACTCGACAAATCTAAGCGGG 57.705 50.000 0.00 0.00 0.00 6.13
5724 11020 2.993899 ACAACTCGACAAATCTAAGCGG 59.006 45.455 0.00 0.00 0.00 5.52
5725 11021 5.093457 TCTACAACTCGACAAATCTAAGCG 58.907 41.667 0.00 0.00 0.00 4.68
5726 11022 6.752351 TCATCTACAACTCGACAAATCTAAGC 59.248 38.462 0.00 0.00 0.00 3.09
5727 11023 8.587950 GTTCATCTACAACTCGACAAATCTAAG 58.412 37.037 0.00 0.00 0.00 2.18
5728 11024 8.304596 AGTTCATCTACAACTCGACAAATCTAA 58.695 33.333 0.00 0.00 27.00 2.10
5729 11025 7.827701 AGTTCATCTACAACTCGACAAATCTA 58.172 34.615 0.00 0.00 27.00 1.98
5730 11026 6.692486 AGTTCATCTACAACTCGACAAATCT 58.308 36.000 0.00 0.00 27.00 2.40
5731 11027 6.952935 AGTTCATCTACAACTCGACAAATC 57.047 37.500 0.00 0.00 27.00 2.17
5732 11028 6.952935 GAGTTCATCTACAACTCGACAAAT 57.047 37.500 0.00 0.00 40.23 2.32
5819 11115 7.315142 TGCTTGATTATCAGTTTGATTGAACC 58.685 34.615 0.00 0.00 38.26 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.