Multiple sequence alignment - TraesCS2B01G098300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G098300 chr2B 100.000 4284 0 0 1 4284 58299469 58295186 0.000000e+00 7912.0
1 TraesCS2B01G098300 chr2B 93.257 1483 54 16 2831 4284 58086235 58084770 0.000000e+00 2143.0
2 TraesCS2B01G098300 chr2B 90.821 1035 75 11 2834 3859 58603497 58604520 0.000000e+00 1367.0
3 TraesCS2B01G098300 chr2B 93.274 788 33 7 929 1702 58087032 58086251 0.000000e+00 1144.0
4 TraesCS2B01G098300 chr2B 90.366 737 59 7 958 1688 58602745 58603475 0.000000e+00 957.0
5 TraesCS2B01G098300 chr2B 82.410 921 114 31 2832 3733 57790480 57789589 0.000000e+00 760.0
6 TraesCS2B01G098300 chr2B 86.127 692 82 10 1017 1700 57791184 57790499 0.000000e+00 734.0
7 TraesCS2B01G098300 chr2B 90.157 254 21 2 3930 4179 58604519 58604772 1.150000e-85 327.0
8 TraesCS2B01G098300 chr2B 92.941 85 2 1 3647 3731 58104230 58104150 2.090000e-23 121.0
9 TraesCS2B01G098300 chr2B 75.148 169 33 7 1752 1916 140221948 140222111 2.140000e-08 71.3
10 TraesCS2B01G098300 chr2A 91.981 1484 68 10 2832 4284 38347748 38346285 0.000000e+00 2034.0
11 TraesCS2B01G098300 chr2A 92.130 953 48 8 2832 3777 38590944 38591876 0.000000e+00 1319.0
12 TraesCS2B01G098300 chr2A 91.053 760 46 9 964 1702 38348523 38347765 0.000000e+00 1007.0
13 TraesCS2B01G098300 chr2A 90.921 760 47 9 964 1702 38590169 38590927 0.000000e+00 1002.0
14 TraesCS2B01G098300 chr2A 80.952 924 133 27 2834 3745 38340965 38340073 0.000000e+00 691.0
15 TraesCS2B01G098300 chr2A 90.593 489 37 3 3252 3740 38392633 38392154 1.300000e-179 640.0
16 TraesCS2B01G098300 chr2A 83.876 676 97 8 1036 1700 38341663 38340989 6.040000e-178 634.0
17 TraesCS2B01G098300 chr2A 88.235 459 38 5 897 1344 38393083 38392630 6.310000e-148 534.0
18 TraesCS2B01G098300 chr2A 86.977 430 49 7 1953 2377 704704067 704703640 1.080000e-130 477.0
19 TraesCS2B01G098300 chr2A 92.063 63 4 1 1 62 38348663 38348601 2.120000e-13 87.9
20 TraesCS2B01G098300 chr2A 92.063 63 4 1 1 62 38590029 38590091 2.120000e-13 87.9
21 TraesCS2B01G098300 chr6B 93.184 1115 44 9 1722 2833 95559484 95560569 0.000000e+00 1609.0
22 TraesCS2B01G098300 chr6B 89.314 1151 80 18 1702 2833 680129368 680130494 0.000000e+00 1404.0
23 TraesCS2B01G098300 chr3B 88.114 1119 83 25 1722 2833 812716454 812717529 0.000000e+00 1284.0
24 TraesCS2B01G098300 chr3B 95.238 357 16 1 2478 2833 819277155 819276799 8.040000e-157 564.0
25 TraesCS2B01G098300 chr3B 92.203 295 21 2 2540 2833 755658989 755659282 2.380000e-112 416.0
26 TraesCS2B01G098300 chr3B 98.795 83 1 0 378 460 8689451 8689369 9.600000e-32 148.0
27 TraesCS2B01G098300 chr3B 97.590 83 2 0 378 460 10358186 10358268 4.470000e-30 143.0
28 TraesCS2B01G098300 chr3B 81.356 177 27 5 1052 1225 13821699 13821526 5.780000e-29 139.0
29 TraesCS2B01G098300 chr1D 87.611 1122 82 37 1722 2833 391952017 391950943 0.000000e+00 1249.0
30 TraesCS2B01G098300 chr1D 97.619 84 2 0 378 461 463456889 463456972 1.240000e-30 145.0
31 TraesCS2B01G098300 chr1D 89.474 76 6 2 820 894 49614283 49614357 1.270000e-15 95.3
32 TraesCS2B01G098300 chr2D 92.857 840 44 4 2832 3660 35230470 35229636 0.000000e+00 1205.0
33 TraesCS2B01G098300 chr2D 93.020 745 40 4 964 1702 35231225 35230487 0.000000e+00 1077.0
34 TraesCS2B01G098300 chr2D 86.331 695 89 5 1012 1700 35035155 35034461 0.000000e+00 752.0
35 TraesCS2B01G098300 chr2D 81.061 924 124 29 2832 3745 35034442 35033560 0.000000e+00 689.0
36 TraesCS2B01G098300 chr2D 84.547 453 55 13 1954 2398 76864266 76864711 6.580000e-118 435.0
37 TraesCS2B01G098300 chr2D 90.647 278 13 2 4020 4284 35229642 35229365 1.460000e-94 357.0
38 TraesCS2B01G098300 chr2D 78.281 221 31 11 685 895 25368108 25368321 4.500000e-25 126.0
39 TraesCS2B01G098300 chr5B 84.845 772 92 20 1722 2480 480398192 480398951 0.000000e+00 754.0
40 TraesCS2B01G098300 chr5B 85.106 94 10 4 3844 3934 491439194 491439286 4.560000e-15 93.5
41 TraesCS2B01G098300 chr5D 82.222 765 80 37 1722 2480 418462778 418463492 3.660000e-170 608.0
42 TraesCS2B01G098300 chr5D 83.683 619 82 14 1748 2356 495214412 495213803 2.240000e-157 566.0
43 TraesCS2B01G098300 chr5D 87.762 286 22 11 2077 2356 44185468 44185190 5.340000e-84 322.0
44 TraesCS2B01G098300 chr5D 90.868 219 20 0 158 376 537949552 537949770 1.160000e-75 294.0
45 TraesCS2B01G098300 chr5D 92.708 96 7 0 369 464 492282458 492282553 5.780000e-29 139.0
46 TraesCS2B01G098300 chr5D 86.250 80 6 2 3857 3931 450670050 450670129 9.870000e-12 82.4
47 TraesCS2B01G098300 chr7B 90.719 431 38 2 465 894 43689985 43689556 1.340000e-159 573.0
48 TraesCS2B01G098300 chr7B 90.879 307 25 3 2528 2833 748027763 748027459 3.990000e-110 409.0
49 TraesCS2B01G098300 chr7B 90.500 200 11 4 178 377 43690181 43689990 1.530000e-64 257.0
50 TraesCS2B01G098300 chr7B 82.273 220 35 4 1944 2161 717356266 717356049 2.030000e-43 187.0
51 TraesCS2B01G098300 chr7B 94.444 90 5 0 375 464 40180650 40180739 5.780000e-29 139.0
52 TraesCS2B01G098300 chr7B 84.000 125 15 2 62 181 43690585 43690461 9.730000e-22 115.0
53 TraesCS2B01G098300 chr7B 82.645 121 7 6 1696 1803 665148090 665147971 1.270000e-15 95.3
54 TraesCS2B01G098300 chr5A 85.261 441 57 5 459 894 705151429 705151866 8.450000e-122 448.0
55 TraesCS2B01G098300 chr5A 91.613 155 13 0 158 312 475327999 475328153 9.330000e-52 215.0
56 TraesCS2B01G098300 chr5A 86.047 86 9 1 3853 3938 490326156 490326074 5.900000e-14 89.8
57 TraesCS2B01G098300 chr5A 86.047 86 9 1 3853 3938 490416186 490416104 5.900000e-14 89.8
58 TraesCS2B01G098300 chr5A 87.671 73 9 0 158 230 705151073 705151145 7.630000e-13 86.1
59 TraesCS2B01G098300 chr5A 86.486 74 7 1 3858 3931 490326081 490326151 1.280000e-10 78.7
60 TraesCS2B01G098300 chr5A 86.486 74 7 1 3858 3931 490416111 490416181 1.280000e-10 78.7
61 TraesCS2B01G098300 chr7D 90.057 352 19 8 2483 2833 5793716 5794052 3.930000e-120 442.0
62 TraesCS2B01G098300 chr7D 88.529 340 33 5 1722 2061 5793098 5793431 1.430000e-109 407.0
63 TraesCS2B01G098300 chr7D 90.789 76 5 2 820 894 374767758 374767684 2.730000e-17 100.0
64 TraesCS2B01G098300 chr7A 92.542 295 21 1 2540 2833 47395612 47395906 5.120000e-114 422.0
65 TraesCS2B01G098300 chr7A 94.444 90 5 0 378 467 204608031 204607942 5.780000e-29 139.0
66 TraesCS2B01G098300 chr3D 74.576 472 103 14 2834 3296 28224053 28223590 1.570000e-44 191.0
67 TraesCS2B01G098300 chr3D 74.811 397 65 29 2918 3301 4872555 4872181 3.450000e-31 147.0
68 TraesCS2B01G098300 chr1B 79.295 227 36 10 1727 1950 606187832 606188050 9.600000e-32 148.0
69 TraesCS2B01G098300 chr1B 95.455 88 3 1 378 464 550388478 550388391 5.780000e-29 139.0
70 TraesCS2B01G098300 chr4A 97.619 84 2 0 378 461 621583778 621583695 1.240000e-30 145.0
71 TraesCS2B01G098300 chr4A 90.291 103 8 2 365 465 581294458 581294560 2.690000e-27 134.0
72 TraesCS2B01G098300 chr3A 78.243 239 43 6 2834 3065 38159782 38159546 1.240000e-30 145.0
73 TraesCS2B01G098300 chr3A 89.189 74 7 1 3858 3931 649820022 649820094 1.640000e-14 91.6
74 TraesCS2B01G098300 chr4B 92.105 76 4 2 819 893 439316215 439316289 5.860000e-19 106.0
75 TraesCS2B01G098300 chr4D 90.789 76 5 2 819 893 355853892 355853966 2.730000e-17 100.0
76 TraesCS2B01G098300 chr4D 88.158 76 6 3 820 893 493906713 493906639 2.120000e-13 87.9
77 TraesCS2B01G098300 chr1A 89.474 76 7 1 820 894 498586261 498586336 1.270000e-15 95.3
78 TraesCS2B01G098300 chrUn 100.000 28 0 0 1697 1724 70158598 70158571 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G098300 chr2B 58295186 58299469 4283 True 7912.000000 7912 100.000000 1 4284 1 chr2B.!!$R2 4283
1 TraesCS2B01G098300 chr2B 58084770 58087032 2262 True 1643.500000 2143 93.265500 929 4284 2 chr2B.!!$R4 3355
2 TraesCS2B01G098300 chr2B 58602745 58604772 2027 False 883.666667 1367 90.448000 958 4179 3 chr2B.!!$F2 3221
3 TraesCS2B01G098300 chr2B 57789589 57791184 1595 True 747.000000 760 84.268500 1017 3733 2 chr2B.!!$R3 2716
4 TraesCS2B01G098300 chr2A 38346285 38348663 2378 True 1042.966667 2034 91.699000 1 4284 3 chr2A.!!$R3 4283
5 TraesCS2B01G098300 chr2A 38590029 38591876 1847 False 802.966667 1319 91.704667 1 3777 3 chr2A.!!$F1 3776
6 TraesCS2B01G098300 chr2A 38340073 38341663 1590 True 662.500000 691 82.414000 1036 3745 2 chr2A.!!$R2 2709
7 TraesCS2B01G098300 chr2A 38392154 38393083 929 True 587.000000 640 89.414000 897 3740 2 chr2A.!!$R4 2843
8 TraesCS2B01G098300 chr6B 95559484 95560569 1085 False 1609.000000 1609 93.184000 1722 2833 1 chr6B.!!$F1 1111
9 TraesCS2B01G098300 chr6B 680129368 680130494 1126 False 1404.000000 1404 89.314000 1702 2833 1 chr6B.!!$F2 1131
10 TraesCS2B01G098300 chr3B 812716454 812717529 1075 False 1284.000000 1284 88.114000 1722 2833 1 chr3B.!!$F3 1111
11 TraesCS2B01G098300 chr1D 391950943 391952017 1074 True 1249.000000 1249 87.611000 1722 2833 1 chr1D.!!$R1 1111
12 TraesCS2B01G098300 chr2D 35229365 35231225 1860 True 879.666667 1205 92.174667 964 4284 3 chr2D.!!$R2 3320
13 TraesCS2B01G098300 chr2D 35033560 35035155 1595 True 720.500000 752 83.696000 1012 3745 2 chr2D.!!$R1 2733
14 TraesCS2B01G098300 chr5B 480398192 480398951 759 False 754.000000 754 84.845000 1722 2480 1 chr5B.!!$F1 758
15 TraesCS2B01G098300 chr5D 418462778 418463492 714 False 608.000000 608 82.222000 1722 2480 1 chr5D.!!$F1 758
16 TraesCS2B01G098300 chr5D 495213803 495214412 609 True 566.000000 566 83.683000 1748 2356 1 chr5D.!!$R2 608
17 TraesCS2B01G098300 chr7B 43689556 43690585 1029 True 315.000000 573 88.406333 62 894 3 chr7B.!!$R4 832
18 TraesCS2B01G098300 chr5A 705151073 705151866 793 False 267.050000 448 86.466000 158 894 2 chr5A.!!$F4 736
19 TraesCS2B01G098300 chr7D 5793098 5794052 954 False 424.500000 442 89.293000 1722 2833 2 chr7D.!!$F1 1111

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
387 526 0.033503 TCACATCTGCTCCCTCCGTA 60.034 55.0 0.00 0.00 0.00 4.02 F
565 704 0.034767 CTTCCCAGGCTGAGATGCAA 60.035 55.0 17.94 0.00 34.04 4.08 F
654 793 0.037697 TACGGACGTTTCTGCAGCAT 60.038 50.0 9.47 0.00 0.00 3.79 F
824 963 0.107703 TGAGGGTGCAATCCGATGAC 60.108 55.0 0.00 0.00 0.00 3.06 F
839 978 0.249489 ATGACGCCAGATCTAACGGC 60.249 55.0 17.78 15.99 42.64 5.68 F
879 1018 0.250793 TAAAAAGATCAGCCGGCGGA 59.749 50.0 31.28 31.28 0.00 5.54 F
2211 2460 0.911525 CTCCTCCCTCTTCCTTGGCA 60.912 60.0 0.00 0.00 0.00 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1582 1794 0.907486 TCGGTCTCGGAGGAGTAGAA 59.093 55.000 4.96 0.00 41.26 2.10 R
2460 2848 0.108615 CACCTCCACCACTCATCGAC 60.109 60.000 0.00 0.00 0.00 4.20 R
2463 2851 1.078143 GCCACCTCCACCACTCATC 60.078 63.158 0.00 0.00 0.00 2.92 R
2610 3001 2.487265 GCTTACTGTGGGACCCATATGG 60.487 54.545 18.51 15.41 35.28 2.74 R
2964 3359 3.859443 TGCCACATTTGAATGTTATGGC 58.141 40.909 21.01 21.01 46.95 4.40 R
3094 3498 4.954202 TGGTCGTATCCAAGTATCAGTTCT 59.046 41.667 0.00 0.00 34.24 3.01 R
3954 4643 0.449388 CAAATTCAGGACCAGCTCGC 59.551 55.000 0.00 0.00 0.00 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 3.973206 TCTCTTCCTTATGCACGGAAA 57.027 42.857 13.15 5.99 38.72 3.13
55 56 3.861840 TCTCTTCCTTATGCACGGAAAG 58.138 45.455 13.15 12.62 38.72 2.62
56 57 3.513912 TCTCTTCCTTATGCACGGAAAGA 59.486 43.478 13.15 14.06 38.72 2.52
57 58 3.861840 TCTTCCTTATGCACGGAAAGAG 58.138 45.455 13.15 4.58 38.72 2.85
58 59 2.691409 TCCTTATGCACGGAAAGAGG 57.309 50.000 0.00 0.00 0.00 3.69
59 60 2.184533 TCCTTATGCACGGAAAGAGGA 58.815 47.619 0.00 0.00 0.00 3.71
60 61 2.569853 TCCTTATGCACGGAAAGAGGAA 59.430 45.455 0.00 0.00 0.00 3.36
64 65 1.125093 TGCACGGAAAGAGGAAGGGA 61.125 55.000 0.00 0.00 0.00 4.20
75 76 3.956744 AGAGGAAGGGAAAAGATTTCCG 58.043 45.455 13.99 0.00 43.01 4.30
81 82 3.621558 AGGGAAAAGATTTCCGTCATCC 58.378 45.455 13.99 1.79 39.45 3.51
91 92 3.932289 CGTCATCCGGCCGATTAC 58.068 61.111 30.73 17.63 0.00 1.89
92 93 1.066752 CGTCATCCGGCCGATTACA 59.933 57.895 30.73 4.78 0.00 2.41
93 94 0.939577 CGTCATCCGGCCGATTACAG 60.940 60.000 30.73 8.93 0.00 2.74
94 95 1.069090 TCATCCGGCCGATTACAGC 59.931 57.895 30.73 0.00 0.00 4.40
95 96 2.029073 ATCCGGCCGATTACAGCG 59.971 61.111 30.73 7.15 0.00 5.18
96 97 4.884257 TCCGGCCGATTACAGCGC 62.884 66.667 30.73 0.00 0.00 5.92
98 99 3.630148 CGGCCGATTACAGCGCAG 61.630 66.667 24.07 3.33 0.00 5.18
117 118 4.699522 GTCCACCGCCTCCCACAC 62.700 72.222 0.00 0.00 0.00 3.82
134 135 3.842126 CGTGCCACGCGTCTCATG 61.842 66.667 9.86 11.97 33.65 3.07
135 136 2.738521 GTGCCACGCGTCTCATGT 60.739 61.111 9.86 0.00 0.00 3.21
136 137 2.738139 TGCCACGCGTCTCATGTG 60.738 61.111 9.86 0.00 0.00 3.21
139 140 3.490759 CACGCGTCTCATGTGGGC 61.491 66.667 9.86 0.00 0.00 5.36
140 141 3.695606 ACGCGTCTCATGTGGGCT 61.696 61.111 5.58 0.00 0.00 5.19
141 142 3.190849 CGCGTCTCATGTGGGCTG 61.191 66.667 0.00 0.00 0.00 4.85
142 143 2.265739 GCGTCTCATGTGGGCTGA 59.734 61.111 0.00 0.00 0.00 4.26
143 144 1.812922 GCGTCTCATGTGGGCTGAG 60.813 63.158 0.00 0.00 41.23 3.35
144 145 1.153489 CGTCTCATGTGGGCTGAGG 60.153 63.158 2.14 0.00 40.44 3.86
145 146 1.451028 GTCTCATGTGGGCTGAGGC 60.451 63.158 0.00 0.00 40.44 4.70
146 147 1.614525 TCTCATGTGGGCTGAGGCT 60.615 57.895 5.84 0.00 40.44 4.58
147 148 0.325577 TCTCATGTGGGCTGAGGCTA 60.326 55.000 5.84 0.00 40.44 3.93
148 149 0.763652 CTCATGTGGGCTGAGGCTAT 59.236 55.000 5.84 0.00 37.15 2.97
149 150 0.761187 TCATGTGGGCTGAGGCTATC 59.239 55.000 5.84 0.00 38.73 2.08
150 151 0.471191 CATGTGGGCTGAGGCTATCA 59.529 55.000 5.84 1.61 38.73 2.15
151 152 0.471617 ATGTGGGCTGAGGCTATCAC 59.528 55.000 5.84 6.46 38.73 3.06
152 153 1.147153 GTGGGCTGAGGCTATCACC 59.853 63.158 5.84 0.00 38.73 4.02
153 154 2.423446 GGGCTGAGGCTATCACCG 59.577 66.667 5.84 0.00 38.73 4.94
154 155 2.280457 GGCTGAGGCTATCACCGC 60.280 66.667 0.00 0.00 38.73 5.68
155 156 2.801631 GGCTGAGGCTATCACCGCT 61.802 63.158 0.00 0.00 38.73 5.52
156 157 1.144936 GCTGAGGCTATCACCGCTT 59.855 57.895 0.00 0.00 33.22 4.68
162 163 2.362717 GAGGCTATCACCGCTTAGAACT 59.637 50.000 0.00 0.00 33.69 3.01
166 167 4.291783 GCTATCACCGCTTAGAACTACTG 58.708 47.826 0.00 0.00 0.00 2.74
206 207 6.381133 TCATTCATCTTCTACACCTAGCTTGA 59.619 38.462 0.00 0.00 0.00 3.02
209 210 6.810911 TCATCTTCTACACCTAGCTTGAATC 58.189 40.000 0.00 0.00 0.00 2.52
212 213 5.127845 TCTTCTACACCTAGCTTGAATCCTG 59.872 44.000 0.00 0.00 0.00 3.86
215 216 4.148128 ACACCTAGCTTGAATCCTGATG 57.852 45.455 0.00 0.00 0.00 3.07
216 217 2.877168 CACCTAGCTTGAATCCTGATGC 59.123 50.000 0.00 0.00 0.00 3.91
218 219 2.877168 CCTAGCTTGAATCCTGATGCAC 59.123 50.000 0.00 0.00 0.00 4.57
267 400 0.962356 GTCCTTGACATGGCAGGTGG 60.962 60.000 10.56 10.12 32.09 4.61
330 469 3.055719 CCCGCGGTGCTGTGAATT 61.056 61.111 26.12 0.00 0.00 2.17
334 473 2.568090 CGGTGCTGTGAATTGGCC 59.432 61.111 0.00 0.00 0.00 5.36
335 474 2.568090 GGTGCTGTGAATTGGCCG 59.432 61.111 0.00 0.00 0.00 6.13
339 478 2.176546 CTGTGAATTGGCCGTGCG 59.823 61.111 0.00 0.00 0.00 5.34
353 492 4.016629 TGCGTGCGCTTGAAGCTG 62.017 61.111 15.92 9.86 39.60 4.24
355 494 4.748679 CGTGCGCTTGAAGCTGCC 62.749 66.667 23.50 16.34 39.60 4.85
356 495 4.748679 GTGCGCTTGAAGCTGCCG 62.749 66.667 23.50 8.16 39.60 5.69
357 496 4.986645 TGCGCTTGAAGCTGCCGA 62.987 61.111 23.50 9.62 39.60 5.54
358 497 3.726517 GCGCTTGAAGCTGCCGAA 61.727 61.111 15.92 0.00 39.60 4.30
359 498 2.174349 CGCTTGAAGCTGCCGAAC 59.826 61.111 15.92 0.00 39.60 3.95
360 499 2.320587 CGCTTGAAGCTGCCGAACT 61.321 57.895 15.92 0.00 39.60 3.01
361 500 1.208614 GCTTGAAGCTGCCGAACTG 59.791 57.895 10.44 0.00 38.45 3.16
362 501 1.208614 CTTGAAGCTGCCGAACTGC 59.791 57.895 0.00 0.00 43.18 4.40
363 502 1.509644 CTTGAAGCTGCCGAACTGCA 61.510 55.000 0.00 0.00 45.14 4.41
364 503 1.785041 TTGAAGCTGCCGAACTGCAC 61.785 55.000 0.00 4.63 45.14 4.57
365 504 2.970974 GAAGCTGCCGAACTGCACC 61.971 63.158 0.00 0.00 45.14 5.01
371 510 3.414700 CCGAACTGCACCGCTCAC 61.415 66.667 0.00 0.00 0.00 3.51
372 511 2.661537 CGAACTGCACCGCTCACA 60.662 61.111 0.00 0.00 0.00 3.58
373 512 2.029288 CGAACTGCACCGCTCACAT 61.029 57.895 0.00 0.00 0.00 3.21
374 513 1.790387 GAACTGCACCGCTCACATC 59.210 57.895 0.00 0.00 0.00 3.06
375 514 0.671781 GAACTGCACCGCTCACATCT 60.672 55.000 0.00 0.00 0.00 2.90
376 515 0.952497 AACTGCACCGCTCACATCTG 60.952 55.000 0.00 0.00 0.00 2.90
377 516 2.743538 TGCACCGCTCACATCTGC 60.744 61.111 0.00 0.00 0.00 4.26
378 517 2.435586 GCACCGCTCACATCTGCT 60.436 61.111 0.00 0.00 0.00 4.24
379 518 2.459442 GCACCGCTCACATCTGCTC 61.459 63.158 0.00 0.00 0.00 4.26
380 519 1.812922 CACCGCTCACATCTGCTCC 60.813 63.158 0.00 0.00 0.00 4.70
381 520 2.202987 CCGCTCACATCTGCTCCC 60.203 66.667 0.00 0.00 0.00 4.30
382 521 2.729479 CCGCTCACATCTGCTCCCT 61.729 63.158 0.00 0.00 0.00 4.20
383 522 1.227205 CGCTCACATCTGCTCCCTC 60.227 63.158 0.00 0.00 0.00 4.30
384 523 1.145819 GCTCACATCTGCTCCCTCC 59.854 63.158 0.00 0.00 0.00 4.30
385 524 1.440893 CTCACATCTGCTCCCTCCG 59.559 63.158 0.00 0.00 0.00 4.63
386 525 1.305297 TCACATCTGCTCCCTCCGT 60.305 57.895 0.00 0.00 0.00 4.69
387 526 0.033503 TCACATCTGCTCCCTCCGTA 60.034 55.000 0.00 0.00 0.00 4.02
388 527 0.824109 CACATCTGCTCCCTCCGTAA 59.176 55.000 0.00 0.00 0.00 3.18
389 528 1.207089 CACATCTGCTCCCTCCGTAAA 59.793 52.381 0.00 0.00 0.00 2.01
390 529 1.207329 ACATCTGCTCCCTCCGTAAAC 59.793 52.381 0.00 0.00 0.00 2.01
391 530 1.482593 CATCTGCTCCCTCCGTAAACT 59.517 52.381 0.00 0.00 0.00 2.66
392 531 2.519771 TCTGCTCCCTCCGTAAACTA 57.480 50.000 0.00 0.00 0.00 2.24
393 532 2.811410 TCTGCTCCCTCCGTAAACTAA 58.189 47.619 0.00 0.00 0.00 2.24
394 533 3.371965 TCTGCTCCCTCCGTAAACTAAT 58.628 45.455 0.00 0.00 0.00 1.73
395 534 3.132289 TCTGCTCCCTCCGTAAACTAATG 59.868 47.826 0.00 0.00 0.00 1.90
396 535 2.835764 TGCTCCCTCCGTAAACTAATGT 59.164 45.455 0.00 0.00 0.00 2.71
397 536 4.025360 TGCTCCCTCCGTAAACTAATGTA 58.975 43.478 0.00 0.00 0.00 2.29
398 537 4.467082 TGCTCCCTCCGTAAACTAATGTAA 59.533 41.667 0.00 0.00 0.00 2.41
399 538 5.048507 GCTCCCTCCGTAAACTAATGTAAG 58.951 45.833 0.00 0.00 0.00 2.34
400 539 5.163478 GCTCCCTCCGTAAACTAATGTAAGA 60.163 44.000 0.00 0.00 0.00 2.10
401 540 6.461110 TCCCTCCGTAAACTAATGTAAGAG 57.539 41.667 0.00 0.00 0.00 2.85
402 541 5.954150 TCCCTCCGTAAACTAATGTAAGAGT 59.046 40.000 0.00 0.00 0.00 3.24
403 542 6.040878 CCCTCCGTAAACTAATGTAAGAGTG 58.959 44.000 0.00 0.00 0.00 3.51
404 543 6.350780 CCCTCCGTAAACTAATGTAAGAGTGT 60.351 42.308 0.00 0.00 0.00 3.55
405 544 7.095270 CCTCCGTAAACTAATGTAAGAGTGTT 58.905 38.462 0.00 0.00 0.00 3.32
406 545 7.601508 CCTCCGTAAACTAATGTAAGAGTGTTT 59.398 37.037 0.00 0.00 0.00 2.83
407 546 9.630098 CTCCGTAAACTAATGTAAGAGTGTTTA 57.370 33.333 0.00 0.00 0.00 2.01
408 547 9.630098 TCCGTAAACTAATGTAAGAGTGTTTAG 57.370 33.333 0.00 0.00 32.78 1.85
409 548 9.630098 CCGTAAACTAATGTAAGAGTGTTTAGA 57.370 33.333 0.00 0.00 32.78 2.10
455 594 8.658499 ACGCTTTTATATTAGTTTACAGAGGG 57.342 34.615 0.00 0.00 0.00 4.30
456 595 8.480501 ACGCTTTTATATTAGTTTACAGAGGGA 58.519 33.333 0.00 0.00 0.00 4.20
457 596 8.979574 CGCTTTTATATTAGTTTACAGAGGGAG 58.020 37.037 0.00 0.00 0.00 4.30
458 597 9.833917 GCTTTTATATTAGTTTACAGAGGGAGT 57.166 33.333 0.00 0.00 0.00 3.85
464 603 6.600882 TTAGTTTACAGAGGGAGTACAAGG 57.399 41.667 0.00 0.00 0.00 3.61
465 604 3.261137 AGTTTACAGAGGGAGTACAAGGC 59.739 47.826 0.00 0.00 0.00 4.35
466 605 2.615986 TACAGAGGGAGTACAAGGCA 57.384 50.000 0.00 0.00 0.00 4.75
467 606 1.958288 ACAGAGGGAGTACAAGGCAT 58.042 50.000 0.00 0.00 0.00 4.40
468 607 1.556911 ACAGAGGGAGTACAAGGCATG 59.443 52.381 0.00 0.00 0.00 4.06
469 608 0.543749 AGAGGGAGTACAAGGCATGC 59.456 55.000 9.90 9.90 0.00 4.06
470 609 0.464554 GAGGGAGTACAAGGCATGCC 60.465 60.000 30.12 30.12 0.00 4.40
471 610 1.819632 GGGAGTACAAGGCATGCCG 60.820 63.158 30.50 19.88 41.95 5.69
472 611 2.472909 GGAGTACAAGGCATGCCGC 61.473 63.158 30.50 18.36 41.95 6.53
491 630 4.695231 CTGTCCGCCGTCGTTCGT 62.695 66.667 0.00 0.00 37.94 3.85
492 631 4.688419 TGTCCGCCGTCGTTCGTC 62.688 66.667 0.00 0.00 37.94 4.20
496 635 4.099585 CGCCGTCGTTCGTCGTTG 62.100 66.667 10.21 0.29 36.18 4.10
497 636 3.026311 GCCGTCGTTCGTCGTTGT 61.026 61.111 10.21 0.00 40.80 3.32
498 637 2.579574 GCCGTCGTTCGTCGTTGTT 61.580 57.895 10.21 0.00 40.80 2.83
499 638 1.479994 CCGTCGTTCGTCGTTGTTC 59.520 57.895 10.21 0.00 40.80 3.18
500 639 1.479994 CGTCGTTCGTCGTTGTTCC 59.520 57.895 4.05 0.00 40.80 3.62
501 640 1.201722 CGTCGTTCGTCGTTGTTCCA 61.202 55.000 4.05 0.00 40.80 3.53
502 641 1.134226 GTCGTTCGTCGTTGTTCCAT 58.866 50.000 0.00 0.00 40.80 3.41
503 642 1.133407 TCGTTCGTCGTTGTTCCATG 58.867 50.000 0.00 0.00 40.80 3.66
504 643 0.856641 CGTTCGTCGTTGTTCCATGT 59.143 50.000 0.00 0.00 34.52 3.21
505 644 1.136721 CGTTCGTCGTTGTTCCATGTC 60.137 52.381 0.00 0.00 34.52 3.06
506 645 1.133407 TTCGTCGTTGTTCCATGTCG 58.867 50.000 0.00 0.00 0.00 4.35
507 646 1.129809 CGTCGTTGTTCCATGTCGC 59.870 57.895 0.00 0.00 0.00 5.19
508 647 1.282248 CGTCGTTGTTCCATGTCGCT 61.282 55.000 0.00 0.00 0.00 4.93
509 648 1.705256 GTCGTTGTTCCATGTCGCTA 58.295 50.000 0.00 0.00 0.00 4.26
510 649 2.063266 GTCGTTGTTCCATGTCGCTAA 58.937 47.619 0.00 0.00 0.00 3.09
511 650 2.063266 TCGTTGTTCCATGTCGCTAAC 58.937 47.619 0.00 0.00 0.00 2.34
512 651 1.201769 CGTTGTTCCATGTCGCTAACG 60.202 52.381 0.00 0.00 42.01 3.18
513 652 1.796459 GTTGTTCCATGTCGCTAACGT 59.204 47.619 0.00 0.00 41.18 3.99
514 653 1.705256 TGTTCCATGTCGCTAACGTC 58.295 50.000 0.00 0.00 41.18 4.34
515 654 0.997196 GTTCCATGTCGCTAACGTCC 59.003 55.000 0.00 0.00 41.18 4.79
516 655 0.892755 TTCCATGTCGCTAACGTCCT 59.107 50.000 0.00 0.00 41.18 3.85
517 656 0.172578 TCCATGTCGCTAACGTCCTG 59.827 55.000 0.00 0.00 41.18 3.86
518 657 0.806102 CCATGTCGCTAACGTCCTGG 60.806 60.000 0.00 0.00 41.18 4.45
519 658 0.172578 CATGTCGCTAACGTCCTGGA 59.827 55.000 0.00 0.00 41.18 3.86
520 659 0.456221 ATGTCGCTAACGTCCTGGAG 59.544 55.000 0.00 0.00 41.18 3.86
521 660 1.139095 GTCGCTAACGTCCTGGAGG 59.861 63.158 14.51 14.51 41.18 4.30
522 661 1.001764 TCGCTAACGTCCTGGAGGA 60.002 57.895 22.22 0.00 39.10 3.71
523 662 1.030488 TCGCTAACGTCCTGGAGGAG 61.030 60.000 22.22 11.35 46.49 3.69
524 663 1.142097 GCTAACGTCCTGGAGGAGC 59.858 63.158 22.22 16.84 46.49 4.70
525 664 1.605058 GCTAACGTCCTGGAGGAGCA 61.605 60.000 22.22 6.34 46.49 4.26
526 665 0.173708 CTAACGTCCTGGAGGAGCAC 59.826 60.000 22.22 0.00 46.49 4.40
527 666 1.255667 TAACGTCCTGGAGGAGCACC 61.256 60.000 22.22 0.00 46.49 5.01
528 667 4.135153 CGTCCTGGAGGAGCACCG 62.135 72.222 10.85 0.00 46.49 4.94
529 668 3.775654 GTCCTGGAGGAGCACCGG 61.776 72.222 0.00 0.00 46.49 5.28
540 679 4.157120 GCACCGGCGTCCATAGGT 62.157 66.667 6.01 0.00 37.49 3.08
541 680 2.202878 CACCGGCGTCCATAGGTG 60.203 66.667 6.01 0.41 46.52 4.00
542 681 4.157120 ACCGGCGTCCATAGGTGC 62.157 66.667 6.01 0.00 35.36 5.01
545 684 4.157120 GGCGTCCATAGGTGCGGT 62.157 66.667 0.00 0.00 0.00 5.68
546 685 2.585247 GCGTCCATAGGTGCGGTC 60.585 66.667 0.00 0.00 0.00 4.79
547 686 3.077519 GCGTCCATAGGTGCGGTCT 62.078 63.158 0.00 0.00 0.00 3.85
548 687 1.515954 CGTCCATAGGTGCGGTCTT 59.484 57.895 0.00 0.00 0.00 3.01
549 688 0.527817 CGTCCATAGGTGCGGTCTTC 60.528 60.000 0.00 0.00 0.00 2.87
550 689 0.179081 GTCCATAGGTGCGGTCTTCC 60.179 60.000 0.00 0.00 0.00 3.46
551 690 1.146263 CCATAGGTGCGGTCTTCCC 59.854 63.158 0.00 0.00 0.00 3.97
552 691 1.622607 CCATAGGTGCGGTCTTCCCA 61.623 60.000 0.00 0.00 0.00 4.37
553 692 0.179073 CATAGGTGCGGTCTTCCCAG 60.179 60.000 0.00 0.00 0.00 4.45
554 693 1.338136 ATAGGTGCGGTCTTCCCAGG 61.338 60.000 0.00 0.00 0.00 4.45
556 695 4.021925 GTGCGGTCTTCCCAGGCT 62.022 66.667 0.00 0.00 0.00 4.58
557 696 4.020617 TGCGGTCTTCCCAGGCTG 62.021 66.667 7.75 7.75 33.62 4.85
558 697 3.706373 GCGGTCTTCCCAGGCTGA 61.706 66.667 17.94 0.00 31.88 4.26
559 698 2.581354 CGGTCTTCCCAGGCTGAG 59.419 66.667 17.94 1.68 31.88 3.35
560 699 1.984570 CGGTCTTCCCAGGCTGAGA 60.985 63.158 17.94 4.99 31.88 3.27
561 700 1.333636 CGGTCTTCCCAGGCTGAGAT 61.334 60.000 17.94 0.00 31.88 2.75
562 701 0.179936 GGTCTTCCCAGGCTGAGATG 59.820 60.000 17.94 10.96 0.00 2.90
563 702 0.463474 GTCTTCCCAGGCTGAGATGC 60.463 60.000 17.94 3.58 0.00 3.91
564 703 0.911045 TCTTCCCAGGCTGAGATGCA 60.911 55.000 17.94 0.00 34.04 3.96
565 704 0.034767 CTTCCCAGGCTGAGATGCAA 60.035 55.000 17.94 0.00 34.04 4.08
566 705 0.322816 TTCCCAGGCTGAGATGCAAC 60.323 55.000 17.94 0.00 34.04 4.17
567 706 1.001764 CCCAGGCTGAGATGCAACA 60.002 57.895 17.94 0.00 34.04 3.33
568 707 0.609957 CCCAGGCTGAGATGCAACAA 60.610 55.000 17.94 0.00 34.04 2.83
569 708 0.524862 CCAGGCTGAGATGCAACAAC 59.475 55.000 17.94 0.00 34.04 3.32
570 709 1.241165 CAGGCTGAGATGCAACAACA 58.759 50.000 9.42 0.00 34.04 3.33
571 710 1.199327 CAGGCTGAGATGCAACAACAG 59.801 52.381 9.42 13.71 34.04 3.16
572 711 1.072806 AGGCTGAGATGCAACAACAGA 59.927 47.619 19.36 0.00 34.04 3.41
573 712 2.089980 GGCTGAGATGCAACAACAGAT 58.910 47.619 19.36 0.00 34.04 2.90
574 713 2.097142 GGCTGAGATGCAACAACAGATC 59.903 50.000 19.36 10.25 34.04 2.75
575 714 2.097142 GCTGAGATGCAACAACAGATCC 59.903 50.000 19.36 4.42 0.00 3.36
576 715 3.607741 CTGAGATGCAACAACAGATCCT 58.392 45.455 13.07 0.00 0.00 3.24
577 716 3.340928 TGAGATGCAACAACAGATCCTG 58.659 45.455 0.00 0.00 37.52 3.86
579 718 4.020307 TGAGATGCAACAACAGATCCTGTA 60.020 41.667 0.00 0.00 44.62 2.74
580 719 4.910195 AGATGCAACAACAGATCCTGTAA 58.090 39.130 0.00 0.00 44.62 2.41
581 720 5.503927 AGATGCAACAACAGATCCTGTAAT 58.496 37.500 0.00 0.00 44.62 1.89
582 721 6.653020 AGATGCAACAACAGATCCTGTAATA 58.347 36.000 0.00 0.00 44.62 0.98
583 722 7.285566 AGATGCAACAACAGATCCTGTAATAT 58.714 34.615 0.00 0.00 44.62 1.28
584 723 6.682423 TGCAACAACAGATCCTGTAATATG 57.318 37.500 0.00 0.00 44.62 1.78
585 724 6.413892 TGCAACAACAGATCCTGTAATATGA 58.586 36.000 0.00 0.00 44.62 2.15
586 725 7.056006 TGCAACAACAGATCCTGTAATATGAT 58.944 34.615 0.00 0.00 44.62 2.45
587 726 7.557358 TGCAACAACAGATCCTGTAATATGATT 59.443 33.333 0.00 0.00 44.62 2.57
588 727 8.072567 GCAACAACAGATCCTGTAATATGATTC 58.927 37.037 0.00 0.00 44.62 2.52
589 728 9.334947 CAACAACAGATCCTGTAATATGATTCT 57.665 33.333 0.00 0.00 44.62 2.40
590 729 9.911788 AACAACAGATCCTGTAATATGATTCTT 57.088 29.630 0.00 0.00 44.62 2.52
591 730 9.334947 ACAACAGATCCTGTAATATGATTCTTG 57.665 33.333 0.00 0.00 44.62 3.02
592 731 9.334947 CAACAGATCCTGTAATATGATTCTTGT 57.665 33.333 0.00 0.00 44.62 3.16
593 732 9.911788 AACAGATCCTGTAATATGATTCTTGTT 57.088 29.630 0.00 0.00 44.62 2.83
620 759 5.649782 AAAATTTCCGCAACATGATCTCT 57.350 34.783 0.00 0.00 0.00 3.10
621 760 6.757897 AAAATTTCCGCAACATGATCTCTA 57.242 33.333 0.00 0.00 0.00 2.43
622 761 5.741388 AATTTCCGCAACATGATCTCTAC 57.259 39.130 0.00 0.00 0.00 2.59
623 762 4.471904 TTTCCGCAACATGATCTCTACT 57.528 40.909 0.00 0.00 0.00 2.57
624 763 3.443099 TCCGCAACATGATCTCTACTG 57.557 47.619 0.00 0.00 0.00 2.74
625 764 1.863454 CCGCAACATGATCTCTACTGC 59.137 52.381 0.00 0.00 0.00 4.40
626 765 2.543641 CGCAACATGATCTCTACTGCA 58.456 47.619 0.00 0.00 0.00 4.41
627 766 2.931969 CGCAACATGATCTCTACTGCAA 59.068 45.455 0.00 0.00 0.00 4.08
628 767 3.371898 CGCAACATGATCTCTACTGCAAA 59.628 43.478 0.00 0.00 0.00 3.68
629 768 4.142838 CGCAACATGATCTCTACTGCAAAA 60.143 41.667 0.00 0.00 0.00 2.44
630 769 5.617529 CGCAACATGATCTCTACTGCAAAAA 60.618 40.000 0.00 0.00 0.00 1.94
649 788 4.400036 AAAATTCTACGGACGTTTCTGC 57.600 40.909 1.57 0.00 0.00 4.26
650 789 2.736144 ATTCTACGGACGTTTCTGCA 57.264 45.000 1.57 0.00 0.00 4.41
651 790 2.060326 TTCTACGGACGTTTCTGCAG 57.940 50.000 7.63 7.63 0.00 4.41
652 791 0.388134 TCTACGGACGTTTCTGCAGC 60.388 55.000 9.47 0.00 0.00 5.25
653 792 0.666274 CTACGGACGTTTCTGCAGCA 60.666 55.000 9.47 0.00 0.00 4.41
654 793 0.037697 TACGGACGTTTCTGCAGCAT 60.038 50.000 9.47 0.00 0.00 3.79
655 794 1.133253 CGGACGTTTCTGCAGCATG 59.867 57.895 9.47 6.12 40.87 4.06
656 795 1.291184 CGGACGTTTCTGCAGCATGA 61.291 55.000 9.47 0.00 39.69 3.07
657 796 0.166814 GGACGTTTCTGCAGCATGAC 59.833 55.000 9.47 4.00 39.69 3.06
658 797 0.166814 GACGTTTCTGCAGCATGACC 59.833 55.000 9.47 0.00 39.69 4.02
659 798 0.250467 ACGTTTCTGCAGCATGACCT 60.250 50.000 9.47 0.00 39.69 3.85
660 799 0.445436 CGTTTCTGCAGCATGACCTC 59.555 55.000 9.47 0.00 39.69 3.85
661 800 1.818642 GTTTCTGCAGCATGACCTCT 58.181 50.000 9.47 0.00 39.69 3.69
662 801 2.675032 CGTTTCTGCAGCATGACCTCTA 60.675 50.000 9.47 0.00 39.69 2.43
663 802 3.539604 GTTTCTGCAGCATGACCTCTAT 58.460 45.455 9.47 0.00 39.69 1.98
664 803 3.920231 TTCTGCAGCATGACCTCTATT 57.080 42.857 9.47 0.00 39.69 1.73
665 804 3.465742 TCTGCAGCATGACCTCTATTC 57.534 47.619 9.47 0.00 39.69 1.75
666 805 2.767960 TCTGCAGCATGACCTCTATTCA 59.232 45.455 9.47 0.00 39.69 2.57
667 806 3.198417 TCTGCAGCATGACCTCTATTCAA 59.802 43.478 9.47 0.00 39.69 2.69
668 807 3.943381 CTGCAGCATGACCTCTATTCAAA 59.057 43.478 0.00 0.00 39.69 2.69
669 808 4.334552 TGCAGCATGACCTCTATTCAAAA 58.665 39.130 0.00 0.00 39.69 2.44
670 809 4.951715 TGCAGCATGACCTCTATTCAAAAT 59.048 37.500 0.00 0.00 39.69 1.82
671 810 6.121590 TGCAGCATGACCTCTATTCAAAATA 58.878 36.000 0.00 0.00 39.69 1.40
672 811 6.774170 TGCAGCATGACCTCTATTCAAAATAT 59.226 34.615 0.00 0.00 39.69 1.28
673 812 7.286087 TGCAGCATGACCTCTATTCAAAATATT 59.714 33.333 0.00 0.00 39.69 1.28
674 813 8.786898 GCAGCATGACCTCTATTCAAAATATTA 58.213 33.333 0.00 0.00 39.69 0.98
716 855 7.712264 CATGGTCTATGTTGCAAAAGAAAAA 57.288 32.000 0.00 0.00 31.92 1.94
756 895 6.974932 TTTTTGTAAAAACAATCTGCAGCA 57.025 29.167 9.47 0.00 33.29 4.41
757 896 7.551035 TTTTTGTAAAAACAATCTGCAGCAT 57.449 28.000 9.47 0.43 33.29 3.79
758 897 6.528014 TTTGTAAAAACAATCTGCAGCATG 57.472 33.333 9.47 12.71 40.87 4.06
759 898 5.450592 TGTAAAAACAATCTGCAGCATGA 57.549 34.783 20.92 0.83 39.69 3.07
760 899 5.221880 TGTAAAAACAATCTGCAGCATGAC 58.778 37.500 20.92 11.13 39.69 3.06
761 900 3.308438 AAAACAATCTGCAGCATGACC 57.692 42.857 20.92 0.00 39.69 4.02
762 901 2.211250 AACAATCTGCAGCATGACCT 57.789 45.000 20.92 6.29 39.69 3.85
763 902 2.211250 ACAATCTGCAGCATGACCTT 57.789 45.000 20.92 0.87 39.69 3.50
764 903 2.522185 ACAATCTGCAGCATGACCTTT 58.478 42.857 20.92 0.56 39.69 3.11
765 904 2.230508 ACAATCTGCAGCATGACCTTTG 59.769 45.455 20.92 11.20 39.69 2.77
766 905 2.211250 ATCTGCAGCATGACCTTTGT 57.789 45.000 9.47 0.00 39.69 2.83
767 906 1.985473 TCTGCAGCATGACCTTTGTT 58.015 45.000 9.47 0.00 39.69 2.83
768 907 1.610038 TCTGCAGCATGACCTTTGTTG 59.390 47.619 9.47 0.00 39.69 3.33
769 908 0.675083 TGCAGCATGACCTTTGTTGG 59.325 50.000 0.00 0.00 39.69 3.77
770 909 0.961019 GCAGCATGACCTTTGTTGGA 59.039 50.000 0.00 0.00 39.69 3.53
771 910 1.068055 GCAGCATGACCTTTGTTGGAG 60.068 52.381 0.00 0.00 39.69 3.86
772 911 2.507484 CAGCATGACCTTTGTTGGAGA 58.493 47.619 0.00 0.00 39.69 3.71
773 912 3.087031 CAGCATGACCTTTGTTGGAGAT 58.913 45.455 0.00 0.00 39.69 2.75
774 913 3.087031 AGCATGACCTTTGTTGGAGATG 58.913 45.455 0.00 0.00 0.00 2.90
775 914 2.821969 GCATGACCTTTGTTGGAGATGT 59.178 45.455 0.00 0.00 0.00 3.06
776 915 3.256631 GCATGACCTTTGTTGGAGATGTT 59.743 43.478 0.00 0.00 0.00 2.71
777 916 4.262164 GCATGACCTTTGTTGGAGATGTTT 60.262 41.667 0.00 0.00 0.00 2.83
778 917 5.464168 CATGACCTTTGTTGGAGATGTTTC 58.536 41.667 0.00 0.00 0.00 2.78
779 918 4.792068 TGACCTTTGTTGGAGATGTTTCT 58.208 39.130 0.00 0.00 33.88 2.52
780 919 4.580167 TGACCTTTGTTGGAGATGTTTCTG 59.420 41.667 0.00 0.00 30.30 3.02
781 920 3.319122 ACCTTTGTTGGAGATGTTTCTGC 59.681 43.478 0.00 0.00 40.51 4.26
795 934 4.406456 TGTTTCTGCAACATTATCCCTGT 58.594 39.130 0.00 0.00 40.71 4.00
796 935 4.832266 TGTTTCTGCAACATTATCCCTGTT 59.168 37.500 0.00 0.00 40.71 3.16
804 943 6.455360 CAACATTATCCCTGTTGCAATAGT 57.545 37.500 20.18 6.29 44.78 2.12
805 944 6.866480 CAACATTATCCCTGTTGCAATAGTT 58.134 36.000 20.18 8.64 44.78 2.24
806 945 6.455360 ACATTATCCCTGTTGCAATAGTTG 57.545 37.500 20.18 11.87 0.00 3.16
807 946 6.186957 ACATTATCCCTGTTGCAATAGTTGA 58.813 36.000 20.18 16.16 0.00 3.18
808 947 6.319658 ACATTATCCCTGTTGCAATAGTTGAG 59.680 38.462 20.18 6.37 0.00 3.02
809 948 3.071874 TCCCTGTTGCAATAGTTGAGG 57.928 47.619 20.18 14.33 0.00 3.86
810 949 2.094675 CCCTGTTGCAATAGTTGAGGG 58.905 52.381 20.18 11.91 35.52 4.30
811 950 2.555227 CCCTGTTGCAATAGTTGAGGGT 60.555 50.000 20.18 0.00 36.71 4.34
812 951 2.489329 CCTGTTGCAATAGTTGAGGGTG 59.511 50.000 20.18 0.63 0.00 4.61
813 952 1.885887 TGTTGCAATAGTTGAGGGTGC 59.114 47.619 0.59 0.00 35.75 5.01
814 953 1.885887 GTTGCAATAGTTGAGGGTGCA 59.114 47.619 0.59 0.00 43.12 4.57
815 954 2.284754 TGCAATAGTTGAGGGTGCAA 57.715 45.000 0.00 0.00 41.95 4.08
816 955 2.806434 TGCAATAGTTGAGGGTGCAAT 58.194 42.857 0.00 0.00 41.95 3.56
817 956 2.754552 TGCAATAGTTGAGGGTGCAATC 59.245 45.455 0.00 0.00 41.95 2.67
818 957 2.099756 GCAATAGTTGAGGGTGCAATCC 59.900 50.000 0.00 0.00 35.28 3.01
819 958 2.332063 ATAGTTGAGGGTGCAATCCG 57.668 50.000 0.00 0.00 0.00 4.18
820 959 1.271856 TAGTTGAGGGTGCAATCCGA 58.728 50.000 0.00 0.00 0.00 4.55
821 960 0.620556 AGTTGAGGGTGCAATCCGAT 59.379 50.000 0.00 0.00 0.00 4.18
822 961 0.734889 GTTGAGGGTGCAATCCGATG 59.265 55.000 0.00 0.00 0.00 3.84
823 962 0.617935 TTGAGGGTGCAATCCGATGA 59.382 50.000 0.00 0.00 0.00 2.92
824 963 0.107703 TGAGGGTGCAATCCGATGAC 60.108 55.000 0.00 0.00 0.00 3.06
825 964 1.153369 AGGGTGCAATCCGATGACG 60.153 57.895 0.00 0.00 39.43 4.35
826 965 2.709475 GGTGCAATCCGATGACGC 59.291 61.111 0.00 0.00 38.29 5.19
827 966 2.709475 GTGCAATCCGATGACGCC 59.291 61.111 0.00 0.00 38.29 5.68
828 967 2.106074 GTGCAATCCGATGACGCCA 61.106 57.895 0.00 0.00 38.29 5.69
829 968 1.815003 TGCAATCCGATGACGCCAG 60.815 57.895 0.00 0.00 38.29 4.85
830 969 1.521457 GCAATCCGATGACGCCAGA 60.521 57.895 0.00 0.00 38.29 3.86
831 970 0.882042 GCAATCCGATGACGCCAGAT 60.882 55.000 0.00 0.00 38.29 2.90
832 971 1.143305 CAATCCGATGACGCCAGATC 58.857 55.000 0.00 0.00 38.29 2.75
833 972 1.043816 AATCCGATGACGCCAGATCT 58.956 50.000 0.00 0.00 38.29 2.75
834 973 1.911057 ATCCGATGACGCCAGATCTA 58.089 50.000 0.00 0.00 38.29 1.98
835 974 1.687563 TCCGATGACGCCAGATCTAA 58.312 50.000 0.00 0.00 38.29 2.10
836 975 1.337071 TCCGATGACGCCAGATCTAAC 59.663 52.381 0.00 0.00 38.29 2.34
837 976 1.399572 CGATGACGCCAGATCTAACG 58.600 55.000 13.39 13.39 0.00 3.18
838 977 1.772182 GATGACGCCAGATCTAACGG 58.228 55.000 17.78 7.26 0.00 4.44
839 978 0.249489 ATGACGCCAGATCTAACGGC 60.249 55.000 17.78 15.99 42.64 5.68
840 979 1.320344 TGACGCCAGATCTAACGGCT 61.320 55.000 19.70 8.49 43.95 5.52
841 980 0.595310 GACGCCAGATCTAACGGCTC 60.595 60.000 17.76 11.55 43.95 4.70
842 981 1.658717 CGCCAGATCTAACGGCTCG 60.659 63.158 17.76 2.85 43.95 5.03
843 982 1.951631 GCCAGATCTAACGGCTCGC 60.952 63.158 13.92 0.00 42.78 5.03
844 983 1.658717 CCAGATCTAACGGCTCGCG 60.659 63.158 0.00 0.00 0.00 5.87
845 984 1.658717 CAGATCTAACGGCTCGCGG 60.659 63.158 6.13 0.00 0.00 6.46
846 985 3.030882 GATCTAACGGCTCGCGGC 61.031 66.667 6.13 8.86 40.90 6.53
861 1000 2.191109 GGCCCGGCCGATCTTTTA 59.809 61.111 30.73 0.00 39.62 1.52
862 1001 1.452470 GGCCCGGCCGATCTTTTAA 60.452 57.895 30.73 0.00 39.62 1.52
863 1002 1.033202 GGCCCGGCCGATCTTTTAAA 61.033 55.000 30.73 0.00 39.62 1.52
864 1003 0.812549 GCCCGGCCGATCTTTTAAAA 59.187 50.000 30.73 0.00 0.00 1.52
865 1004 1.202817 GCCCGGCCGATCTTTTAAAAA 59.797 47.619 30.73 0.00 0.00 1.94
866 1005 2.734175 GCCCGGCCGATCTTTTAAAAAG 60.734 50.000 30.73 4.18 0.00 2.27
867 1006 2.750712 CCCGGCCGATCTTTTAAAAAGA 59.249 45.455 30.73 0.00 0.00 2.52
868 1007 3.380320 CCCGGCCGATCTTTTAAAAAGAT 59.620 43.478 30.73 0.00 39.53 2.40
869 1008 4.497507 CCCGGCCGATCTTTTAAAAAGATC 60.498 45.833 30.73 19.70 45.62 2.75
876 1015 4.434713 TCTTTTAAAAAGATCAGCCGGC 57.565 40.909 21.89 21.89 0.00 6.13
877 1016 2.911819 TTTAAAAAGATCAGCCGGCG 57.088 45.000 23.20 16.49 0.00 6.46
878 1017 1.091537 TTAAAAAGATCAGCCGGCGG 58.908 50.000 24.35 24.35 0.00 6.13
879 1018 0.250793 TAAAAAGATCAGCCGGCGGA 59.749 50.000 31.28 31.28 0.00 5.54
880 1019 1.305930 AAAAAGATCAGCCGGCGGAC 61.306 55.000 31.76 23.05 0.00 4.79
881 1020 4.514577 AAGATCAGCCGGCGGACG 62.515 66.667 31.76 19.79 43.80 4.79
900 1039 1.142748 CGTAGCAGCCCCTGAAGAG 59.857 63.158 0.00 0.00 32.44 2.85
915 1054 2.631062 TGAAGAGGAAGCGGTTGTTCTA 59.369 45.455 3.70 0.00 0.00 2.10
917 1056 3.764237 AGAGGAAGCGGTTGTTCTAAA 57.236 42.857 3.70 0.00 0.00 1.85
918 1057 4.081322 AGAGGAAGCGGTTGTTCTAAAA 57.919 40.909 3.70 0.00 0.00 1.52
919 1058 3.813724 AGAGGAAGCGGTTGTTCTAAAAC 59.186 43.478 3.70 0.00 35.85 2.43
920 1059 3.547746 AGGAAGCGGTTGTTCTAAAACA 58.452 40.909 3.70 0.00 43.58 2.83
921 1060 3.564225 AGGAAGCGGTTGTTCTAAAACAG 59.436 43.478 3.70 0.00 45.72 3.16
923 1062 4.319549 GGAAGCGGTTGTTCTAAAACAGAG 60.320 45.833 3.70 0.00 45.72 3.35
934 1073 8.438676 TGTTCTAAAACAGAGAAAGAAGAAGG 57.561 34.615 0.00 0.00 40.45 3.46
1069 1275 1.853114 GCCGCTCGAGGATGACGATA 61.853 60.000 15.58 0.00 39.02 2.92
1228 1434 1.261238 CCTCCTCGGCTTCTTCCAGT 61.261 60.000 0.00 0.00 0.00 4.00
1731 1950 9.969001 AAATAGCATAAAACTACTAAGGTTCCA 57.031 29.630 0.00 0.00 28.69 3.53
1780 2001 3.491104 CCGATAACTACCAAGTCAGAGGC 60.491 52.174 0.00 0.00 33.75 4.70
2178 2420 2.045926 GCGTGAAGTCCCAGCCAT 60.046 61.111 0.00 0.00 0.00 4.40
2211 2460 0.911525 CTCCTCCCTCTTCCTTGGCA 60.912 60.000 0.00 0.00 0.00 4.92
2452 2840 3.299977 CCGTCGGTGAGTGGTGGA 61.300 66.667 2.08 0.00 0.00 4.02
2453 2841 2.258591 CGTCGGTGAGTGGTGGAG 59.741 66.667 0.00 0.00 0.00 3.86
2454 2842 2.657237 GTCGGTGAGTGGTGGAGG 59.343 66.667 0.00 0.00 0.00 4.30
2455 2843 2.200370 TCGGTGAGTGGTGGAGGT 59.800 61.111 0.00 0.00 0.00 3.85
2456 2844 2.207229 TCGGTGAGTGGTGGAGGTG 61.207 63.158 0.00 0.00 0.00 4.00
2457 2845 2.750350 GGTGAGTGGTGGAGGTGG 59.250 66.667 0.00 0.00 0.00 4.61
2458 2846 2.147387 GGTGAGTGGTGGAGGTGGT 61.147 63.158 0.00 0.00 0.00 4.16
2459 2847 1.371558 GTGAGTGGTGGAGGTGGTC 59.628 63.158 0.00 0.00 0.00 4.02
2460 2848 2.207229 TGAGTGGTGGAGGTGGTCG 61.207 63.158 0.00 0.00 0.00 4.79
2461 2849 2.122989 AGTGGTGGAGGTGGTCGT 60.123 61.111 0.00 0.00 0.00 4.34
2462 2850 2.156051 GAGTGGTGGAGGTGGTCGTC 62.156 65.000 0.00 0.00 0.00 4.20
2463 2851 3.299977 TGGTGGAGGTGGTCGTCG 61.300 66.667 0.00 0.00 0.00 5.12
2464 2852 2.987547 GGTGGAGGTGGTCGTCGA 60.988 66.667 0.00 0.00 0.00 4.20
2465 2853 2.348888 GGTGGAGGTGGTCGTCGAT 61.349 63.158 0.00 0.00 0.00 3.59
2502 2890 1.471119 GTCGATGAGTGGTGGAGGTA 58.529 55.000 0.00 0.00 0.00 3.08
2718 3109 5.206299 CGGTTTAAAATGTTAGCAACGTCA 58.794 37.500 0.00 0.00 0.00 4.35
2964 3359 4.743057 TGGTCTCACCATATTGTCTCAG 57.257 45.455 0.00 0.00 44.79 3.35
3140 3549 8.850156 ACCAGGATGCTAATGAAATGTTATTAC 58.150 33.333 0.00 0.00 31.97 1.89
3239 3648 3.364366 CGCTTGTCATTCCTTCAACAGTC 60.364 47.826 0.00 0.00 0.00 3.51
3354 3766 8.735315 TCTTTGTTTCAGTTTGTAGATGTTCAA 58.265 29.630 0.00 0.00 0.00 2.69
3428 3847 9.973450 ATAGATGAACTTATAGCTGTACTGTTG 57.027 33.333 11.10 0.00 0.00 3.33
3431 3850 6.464222 TGAACTTATAGCTGTACTGTTGCTT 58.536 36.000 11.10 1.41 38.15 3.91
3432 3851 7.608153 TGAACTTATAGCTGTACTGTTGCTTA 58.392 34.615 11.10 0.72 38.15 3.09
3433 3852 8.092068 TGAACTTATAGCTGTACTGTTGCTTAA 58.908 33.333 11.10 6.40 38.15 1.85
3434 3853 8.842358 AACTTATAGCTGTACTGTTGCTTAAA 57.158 30.769 0.00 3.74 38.15 1.52
3435 3854 8.842358 ACTTATAGCTGTACTGTTGCTTAAAA 57.158 30.769 0.00 1.98 38.15 1.52
3520 4189 4.168101 TGTCTTCAACCTTGGGAGATAGT 58.832 43.478 0.00 0.00 0.00 2.12
3954 4643 3.744660 ACTTAGCTCTTCCTTGTGTTGG 58.255 45.455 0.00 0.00 0.00 3.77
3976 4665 3.535561 CGAGCTGGTCCTGAATTTGTAT 58.464 45.455 0.00 0.00 0.00 2.29
4030 4723 6.862090 GGTTCTACTATTACGTTCTGCCTATG 59.138 42.308 0.00 0.00 0.00 2.23
4043 4736 5.791336 TCTGCCTATGTGTATCTGGTTAG 57.209 43.478 0.00 0.00 0.00 2.34
4085 4780 5.515008 GGTTTTCTCTAGGTGAATGAAGGGT 60.515 44.000 0.00 0.00 0.00 4.34
4131 4826 4.737353 CACATCATATCAATGTGGTCGG 57.263 45.455 15.52 0.00 46.58 4.79
4189 4895 0.039165 GTGTGCCTTAAGCCAGTTGC 60.039 55.000 0.00 0.00 42.71 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.966787 GTGCTGTTGGGCCCGGAA 62.967 66.667 19.37 3.25 0.00 4.30
44 45 0.035056 CCCTTCCTCTTTCCGTGCAT 60.035 55.000 0.00 0.00 0.00 3.96
45 46 1.125093 TCCCTTCCTCTTTCCGTGCA 61.125 55.000 0.00 0.00 0.00 4.57
46 47 0.036306 TTCCCTTCCTCTTTCCGTGC 59.964 55.000 0.00 0.00 0.00 5.34
47 48 2.561478 TTTCCCTTCCTCTTTCCGTG 57.439 50.000 0.00 0.00 0.00 4.94
48 49 2.709397 TCTTTTCCCTTCCTCTTTCCGT 59.291 45.455 0.00 0.00 0.00 4.69
49 50 3.418684 TCTTTTCCCTTCCTCTTTCCG 57.581 47.619 0.00 0.00 0.00 4.30
50 51 5.186021 GGAAATCTTTTCCCTTCCTCTTTCC 59.814 44.000 7.64 0.00 35.46 3.13
54 55 3.330998 ACGGAAATCTTTTCCCTTCCTCT 59.669 43.478 12.23 0.00 36.06 3.69
55 56 3.687125 ACGGAAATCTTTTCCCTTCCTC 58.313 45.455 12.23 0.00 36.06 3.71
56 57 3.073946 TGACGGAAATCTTTTCCCTTCCT 59.926 43.478 12.23 0.00 36.06 3.36
57 58 3.418047 TGACGGAAATCTTTTCCCTTCC 58.582 45.455 12.23 0.00 35.17 3.46
58 59 4.096532 GGATGACGGAAATCTTTTCCCTTC 59.903 45.833 12.23 9.74 35.17 3.46
59 60 4.017126 GGATGACGGAAATCTTTTCCCTT 58.983 43.478 12.23 1.45 35.17 3.95
60 61 3.621558 GGATGACGGAAATCTTTTCCCT 58.378 45.455 12.23 2.50 35.17 4.20
75 76 1.222115 GCTGTAATCGGCCGGATGAC 61.222 60.000 27.83 19.71 39.82 3.06
81 82 3.630148 CTGCGCTGTAATCGGCCG 61.630 66.667 22.12 22.12 42.47 6.13
83 84 4.285149 CGCTGCGCTGTAATCGGC 62.285 66.667 9.88 0.00 42.06 5.54
84 85 2.860628 GACGCTGCGCTGTAATCGG 61.861 63.158 23.51 1.87 0.00 4.18
85 86 2.615618 GACGCTGCGCTGTAATCG 59.384 61.111 23.51 12.53 0.00 3.34
86 87 1.809619 TGGACGCTGCGCTGTAATC 60.810 57.895 23.51 10.75 0.00 1.75
87 88 2.100631 GTGGACGCTGCGCTGTAAT 61.101 57.895 23.51 0.04 0.00 1.89
88 89 2.736995 GTGGACGCTGCGCTGTAA 60.737 61.111 23.51 0.28 0.00 2.41
89 90 4.735132 GGTGGACGCTGCGCTGTA 62.735 66.667 23.51 3.20 0.00 2.74
100 101 4.699522 GTGTGGGAGGCGGTGGAC 62.700 72.222 0.00 0.00 0.00 4.02
117 118 3.842126 CATGAGACGCGTGGCACG 61.842 66.667 33.96 33.96 45.88 5.34
118 119 2.738521 ACATGAGACGCGTGGCAC 60.739 61.111 20.70 7.79 37.85 5.01
119 120 2.738139 CACATGAGACGCGTGGCA 60.738 61.111 20.70 15.50 37.85 4.92
120 121 3.490759 CCACATGAGACGCGTGGC 61.491 66.667 20.70 9.04 43.43 5.01
122 123 3.490759 GCCCACATGAGACGCGTG 61.491 66.667 20.70 3.72 39.48 5.34
123 124 3.695606 AGCCCACATGAGACGCGT 61.696 61.111 13.85 13.85 0.00 6.01
124 125 3.190849 CAGCCCACATGAGACGCG 61.191 66.667 3.53 3.53 0.00 6.01
125 126 1.812922 CTCAGCCCACATGAGACGC 60.813 63.158 0.00 0.00 45.80 5.19
126 127 1.153489 CCTCAGCCCACATGAGACG 60.153 63.158 0.00 0.00 45.80 4.18
127 128 1.451028 GCCTCAGCCCACATGAGAC 60.451 63.158 0.00 0.00 45.80 3.36
128 129 0.325577 TAGCCTCAGCCCACATGAGA 60.326 55.000 0.00 0.00 45.80 3.27
129 130 0.763652 ATAGCCTCAGCCCACATGAG 59.236 55.000 0.00 0.00 43.15 2.90
130 131 0.761187 GATAGCCTCAGCCCACATGA 59.239 55.000 0.00 0.00 41.25 3.07
131 132 0.471191 TGATAGCCTCAGCCCACATG 59.529 55.000 0.00 0.00 41.25 3.21
132 133 0.471617 GTGATAGCCTCAGCCCACAT 59.528 55.000 0.00 0.00 41.25 3.21
133 134 1.626356 GGTGATAGCCTCAGCCCACA 61.626 60.000 5.07 0.00 44.86 4.17
134 135 1.147153 GGTGATAGCCTCAGCCCAC 59.853 63.158 5.07 0.00 44.86 4.61
135 136 3.647367 GGTGATAGCCTCAGCCCA 58.353 61.111 5.07 0.00 44.86 5.36
138 139 0.389391 TAAGCGGTGATAGCCTCAGC 59.611 55.000 6.11 6.11 46.66 4.26
139 140 1.957177 TCTAAGCGGTGATAGCCTCAG 59.043 52.381 0.00 0.00 33.51 3.35
140 141 2.067365 TCTAAGCGGTGATAGCCTCA 57.933 50.000 0.00 0.00 34.64 3.86
141 142 2.362717 AGTTCTAAGCGGTGATAGCCTC 59.637 50.000 0.00 0.00 34.64 4.70
142 143 2.389715 AGTTCTAAGCGGTGATAGCCT 58.610 47.619 0.00 0.00 34.64 4.58
143 144 2.892784 AGTTCTAAGCGGTGATAGCC 57.107 50.000 0.00 0.00 34.64 3.93
144 145 4.291783 CAGTAGTTCTAAGCGGTGATAGC 58.708 47.826 0.00 0.00 0.00 2.97
145 146 4.338682 ACCAGTAGTTCTAAGCGGTGATAG 59.661 45.833 0.00 0.00 0.00 2.08
146 147 4.275810 ACCAGTAGTTCTAAGCGGTGATA 58.724 43.478 0.00 0.00 0.00 2.15
147 148 3.097614 ACCAGTAGTTCTAAGCGGTGAT 58.902 45.455 0.00 0.00 0.00 3.06
148 149 2.522185 ACCAGTAGTTCTAAGCGGTGA 58.478 47.619 0.00 0.00 0.00 4.02
149 150 3.314541 AACCAGTAGTTCTAAGCGGTG 57.685 47.619 0.00 0.00 30.99 4.94
216 217 3.674138 GCTTGGATAAAGTGGCACATGTG 60.674 47.826 21.83 21.83 44.52 3.21
218 219 2.492881 TGCTTGGATAAAGTGGCACATG 59.507 45.455 21.41 0.59 44.52 3.21
230 231 2.158957 GGACGAGGTCAATGCTTGGATA 60.159 50.000 0.00 0.00 33.68 2.59
277 410 2.298158 CTACACCTGGTAGCAGGCCG 62.298 65.000 35.36 28.62 46.05 6.13
278 411 1.522569 CTACACCTGGTAGCAGGCC 59.477 63.158 35.36 0.00 46.05 5.19
292 425 1.153369 GCGGCTTCCAGCATCTACA 60.153 57.895 0.00 0.00 44.75 2.74
318 451 2.268076 ACGGCCAATTCACAGCACC 61.268 57.895 2.24 0.00 0.00 5.01
343 482 1.208614 CAGTTCGGCAGCTTCAAGC 59.791 57.895 0.00 0.00 42.84 4.01
344 483 1.208614 GCAGTTCGGCAGCTTCAAG 59.791 57.895 0.00 0.00 0.00 3.02
346 485 2.110835 TGCAGTTCGGCAGCTTCA 59.889 55.556 0.00 0.00 39.25 3.02
354 493 3.414700 GTGAGCGGTGCAGTTCGG 61.415 66.667 0.00 0.00 0.00 4.30
355 494 1.959899 GATGTGAGCGGTGCAGTTCG 61.960 60.000 0.00 0.00 0.00 3.95
356 495 0.671781 AGATGTGAGCGGTGCAGTTC 60.672 55.000 0.00 0.00 0.00 3.01
357 496 0.952497 CAGATGTGAGCGGTGCAGTT 60.952 55.000 0.00 0.00 0.00 3.16
358 497 1.375140 CAGATGTGAGCGGTGCAGT 60.375 57.895 0.00 0.00 0.00 4.40
359 498 2.747822 GCAGATGTGAGCGGTGCAG 61.748 63.158 0.00 0.00 34.18 4.41
360 499 2.743538 GCAGATGTGAGCGGTGCA 60.744 61.111 0.00 0.00 34.18 4.57
361 500 2.435586 AGCAGATGTGAGCGGTGC 60.436 61.111 0.00 0.00 35.48 5.01
362 501 1.812922 GGAGCAGATGTGAGCGGTG 60.813 63.158 0.00 0.00 35.48 4.94
363 502 2.581354 GGAGCAGATGTGAGCGGT 59.419 61.111 0.00 0.00 35.48 5.68
364 503 2.202987 GGGAGCAGATGTGAGCGG 60.203 66.667 0.00 0.00 35.48 5.52
365 504 1.227205 GAGGGAGCAGATGTGAGCG 60.227 63.158 0.00 0.00 35.48 5.03
366 505 1.145819 GGAGGGAGCAGATGTGAGC 59.854 63.158 0.00 0.00 0.00 4.26
367 506 1.326213 ACGGAGGGAGCAGATGTGAG 61.326 60.000 0.00 0.00 0.00 3.51
368 507 0.033503 TACGGAGGGAGCAGATGTGA 60.034 55.000 0.00 0.00 0.00 3.58
369 508 0.824109 TTACGGAGGGAGCAGATGTG 59.176 55.000 0.00 0.00 0.00 3.21
370 509 1.207329 GTTTACGGAGGGAGCAGATGT 59.793 52.381 0.00 0.00 0.00 3.06
371 510 1.482593 AGTTTACGGAGGGAGCAGATG 59.517 52.381 0.00 0.00 0.00 2.90
372 511 1.867363 AGTTTACGGAGGGAGCAGAT 58.133 50.000 0.00 0.00 0.00 2.90
373 512 2.519771 TAGTTTACGGAGGGAGCAGA 57.480 50.000 0.00 0.00 0.00 4.26
374 513 3.118738 ACATTAGTTTACGGAGGGAGCAG 60.119 47.826 0.00 0.00 0.00 4.24
375 514 2.835764 ACATTAGTTTACGGAGGGAGCA 59.164 45.455 0.00 0.00 0.00 4.26
376 515 3.538634 ACATTAGTTTACGGAGGGAGC 57.461 47.619 0.00 0.00 0.00 4.70
377 516 6.096564 ACTCTTACATTAGTTTACGGAGGGAG 59.903 42.308 0.00 0.00 0.00 4.30
378 517 5.954150 ACTCTTACATTAGTTTACGGAGGGA 59.046 40.000 0.00 0.00 0.00 4.20
379 518 6.040878 CACTCTTACATTAGTTTACGGAGGG 58.959 44.000 0.00 0.00 0.00 4.30
380 519 6.628185 ACACTCTTACATTAGTTTACGGAGG 58.372 40.000 0.00 0.00 0.00 4.30
381 520 8.530269 AAACACTCTTACATTAGTTTACGGAG 57.470 34.615 0.00 0.00 0.00 4.63
382 521 9.630098 CTAAACACTCTTACATTAGTTTACGGA 57.370 33.333 0.00 0.00 32.23 4.69
383 522 9.630098 TCTAAACACTCTTACATTAGTTTACGG 57.370 33.333 0.00 0.00 32.23 4.02
429 568 9.106070 CCCTCTGTAAACTAATATAAAAGCGTT 57.894 33.333 0.00 0.00 0.00 4.84
430 569 8.480501 TCCCTCTGTAAACTAATATAAAAGCGT 58.519 33.333 0.00 0.00 0.00 5.07
431 570 8.882415 TCCCTCTGTAAACTAATATAAAAGCG 57.118 34.615 0.00 0.00 0.00 4.68
432 571 9.833917 ACTCCCTCTGTAAACTAATATAAAAGC 57.166 33.333 0.00 0.00 0.00 3.51
438 577 8.925338 CCTTGTACTCCCTCTGTAAACTAATAT 58.075 37.037 0.00 0.00 0.00 1.28
439 578 7.147776 GCCTTGTACTCCCTCTGTAAACTAATA 60.148 40.741 0.00 0.00 0.00 0.98
440 579 6.351966 GCCTTGTACTCCCTCTGTAAACTAAT 60.352 42.308 0.00 0.00 0.00 1.73
441 580 5.046807 GCCTTGTACTCCCTCTGTAAACTAA 60.047 44.000 0.00 0.00 0.00 2.24
442 581 4.465305 GCCTTGTACTCCCTCTGTAAACTA 59.535 45.833 0.00 0.00 0.00 2.24
443 582 3.261137 GCCTTGTACTCCCTCTGTAAACT 59.739 47.826 0.00 0.00 0.00 2.66
444 583 3.007614 TGCCTTGTACTCCCTCTGTAAAC 59.992 47.826 0.00 0.00 0.00 2.01
445 584 3.244582 TGCCTTGTACTCCCTCTGTAAA 58.755 45.455 0.00 0.00 0.00 2.01
446 585 2.897350 TGCCTTGTACTCCCTCTGTAA 58.103 47.619 0.00 0.00 0.00 2.41
447 586 2.615986 TGCCTTGTACTCCCTCTGTA 57.384 50.000 0.00 0.00 0.00 2.74
448 587 1.556911 CATGCCTTGTACTCCCTCTGT 59.443 52.381 0.00 0.00 0.00 3.41
449 588 1.745141 GCATGCCTTGTACTCCCTCTG 60.745 57.143 6.36 0.00 0.00 3.35
450 589 0.543749 GCATGCCTTGTACTCCCTCT 59.456 55.000 6.36 0.00 0.00 3.69
451 590 0.464554 GGCATGCCTTGTACTCCCTC 60.465 60.000 29.98 0.00 0.00 4.30
452 591 1.609783 GGCATGCCTTGTACTCCCT 59.390 57.895 29.98 0.00 0.00 4.20
453 592 1.819632 CGGCATGCCTTGTACTCCC 60.820 63.158 33.07 4.15 0.00 4.30
454 593 2.472909 GCGGCATGCCTTGTACTCC 61.473 63.158 33.07 4.92 37.76 3.85
455 594 3.102097 GCGGCATGCCTTGTACTC 58.898 61.111 33.07 10.21 37.76 2.59
482 621 1.201722 TGGAACAACGACGAACGACG 61.202 55.000 15.65 15.65 45.65 5.12
483 622 2.580661 TGGAACAACGACGAACGAC 58.419 52.632 0.00 0.00 45.65 4.34
490 629 5.510040 CGTTAGCGACATGGAACAACGAC 62.510 52.174 13.25 0.00 41.46 4.34
491 630 3.484699 CGTTAGCGACATGGAACAACGA 61.485 50.000 13.25 0.00 41.46 3.85
492 631 1.201769 CGTTAGCGACATGGAACAACG 60.202 52.381 0.00 2.74 41.46 4.10
493 632 1.796459 ACGTTAGCGACATGGAACAAC 59.204 47.619 5.81 0.00 41.89 3.32
494 633 2.063266 GACGTTAGCGACATGGAACAA 58.937 47.619 5.81 0.00 41.89 2.83
495 634 1.670674 GGACGTTAGCGACATGGAACA 60.671 52.381 5.81 0.00 42.57 3.18
496 635 0.997196 GGACGTTAGCGACATGGAAC 59.003 55.000 5.81 0.00 42.00 3.62
497 636 0.892755 AGGACGTTAGCGACATGGAA 59.107 50.000 5.81 0.00 42.00 3.53
498 637 0.172578 CAGGACGTTAGCGACATGGA 59.827 55.000 5.81 0.00 39.83 3.41
499 638 2.665777 CAGGACGTTAGCGACATGG 58.334 57.895 5.81 0.00 39.83 3.66
500 639 0.172578 TCCAGGACGTTAGCGACATG 59.827 55.000 5.81 7.59 42.16 3.21
501 640 0.456221 CTCCAGGACGTTAGCGACAT 59.544 55.000 5.81 0.00 42.00 3.06
502 641 1.592400 CCTCCAGGACGTTAGCGACA 61.592 60.000 5.81 0.00 42.00 4.35
503 642 1.139095 CCTCCAGGACGTTAGCGAC 59.861 63.158 5.81 0.00 42.00 5.19
504 643 1.001764 TCCTCCAGGACGTTAGCGA 60.002 57.895 5.81 0.00 39.78 4.93
505 644 1.433879 CTCCTCCAGGACGTTAGCG 59.566 63.158 0.00 0.00 39.78 4.26
506 645 1.142097 GCTCCTCCAGGACGTTAGC 59.858 63.158 0.00 0.00 39.78 3.09
507 646 0.173708 GTGCTCCTCCAGGACGTTAG 59.826 60.000 0.00 0.00 39.78 2.34
508 647 1.255667 GGTGCTCCTCCAGGACGTTA 61.256 60.000 0.00 0.00 44.42 3.18
509 648 2.584391 GGTGCTCCTCCAGGACGTT 61.584 63.158 0.00 0.00 44.42 3.99
510 649 2.997897 GGTGCTCCTCCAGGACGT 60.998 66.667 0.00 0.00 44.42 4.34
511 650 4.135153 CGGTGCTCCTCCAGGACG 62.135 72.222 2.85 0.00 44.42 4.79
512 651 3.775654 CCGGTGCTCCTCCAGGAC 61.776 72.222 2.85 0.00 42.75 3.85
520 659 3.792053 CTATGGACGCCGGTGCTCC 62.792 68.421 22.32 22.32 35.23 4.70
521 660 2.279517 CTATGGACGCCGGTGCTC 60.280 66.667 16.69 11.74 35.23 4.26
522 661 3.849951 CCTATGGACGCCGGTGCT 61.850 66.667 16.69 1.79 35.23 4.40
523 662 4.157120 ACCTATGGACGCCGGTGC 62.157 66.667 16.69 7.96 34.67 5.01
524 663 2.202878 CACCTATGGACGCCGGTG 60.203 66.667 14.93 14.93 40.71 4.94
525 664 4.157120 GCACCTATGGACGCCGGT 62.157 66.667 1.90 0.00 0.00 5.28
528 667 4.157120 ACCGCACCTATGGACGCC 62.157 66.667 0.00 0.00 0.00 5.68
529 668 2.573609 AAGACCGCACCTATGGACGC 62.574 60.000 0.00 0.00 0.00 5.19
530 669 0.527817 GAAGACCGCACCTATGGACG 60.528 60.000 0.00 0.00 0.00 4.79
531 670 0.179081 GGAAGACCGCACCTATGGAC 60.179 60.000 0.00 0.00 0.00 4.02
532 671 1.335132 GGGAAGACCGCACCTATGGA 61.335 60.000 0.00 0.00 36.97 3.41
533 672 1.146263 GGGAAGACCGCACCTATGG 59.854 63.158 0.00 0.00 36.97 2.74
534 673 0.179073 CTGGGAAGACCGCACCTATG 60.179 60.000 0.00 0.00 44.64 2.23
535 674 1.338136 CCTGGGAAGACCGCACCTAT 61.338 60.000 0.00 0.00 44.64 2.57
536 675 1.987855 CCTGGGAAGACCGCACCTA 60.988 63.158 0.00 0.00 44.64 3.08
537 676 3.322466 CCTGGGAAGACCGCACCT 61.322 66.667 0.00 0.00 44.64 4.00
539 678 4.021925 AGCCTGGGAAGACCGCAC 62.022 66.667 0.00 0.00 44.64 5.34
540 679 4.020617 CAGCCTGGGAAGACCGCA 62.021 66.667 0.00 0.00 44.64 5.69
541 680 3.672295 CTCAGCCTGGGAAGACCGC 62.672 68.421 0.00 0.00 44.64 5.68
542 681 1.333636 ATCTCAGCCTGGGAAGACCG 61.334 60.000 0.00 0.00 44.64 4.79
543 682 0.179936 CATCTCAGCCTGGGAAGACC 59.820 60.000 0.00 0.00 40.81 3.85
544 683 0.463474 GCATCTCAGCCTGGGAAGAC 60.463 60.000 0.00 0.00 26.19 3.01
545 684 0.911045 TGCATCTCAGCCTGGGAAGA 60.911 55.000 0.00 0.00 26.19 2.87
546 685 0.034767 TTGCATCTCAGCCTGGGAAG 60.035 55.000 0.00 0.00 26.19 3.46
547 686 0.322816 GTTGCATCTCAGCCTGGGAA 60.323 55.000 0.00 0.00 26.19 3.97
548 687 1.300963 GTTGCATCTCAGCCTGGGA 59.699 57.895 0.00 0.00 0.00 4.37
549 688 0.609957 TTGTTGCATCTCAGCCTGGG 60.610 55.000 0.00 0.00 0.00 4.45
550 689 0.524862 GTTGTTGCATCTCAGCCTGG 59.475 55.000 0.00 0.00 0.00 4.45
551 690 1.199327 CTGTTGTTGCATCTCAGCCTG 59.801 52.381 0.00 0.00 0.00 4.85
552 691 1.072806 TCTGTTGTTGCATCTCAGCCT 59.927 47.619 12.38 0.00 0.00 4.58
553 692 1.527034 TCTGTTGTTGCATCTCAGCC 58.473 50.000 12.38 0.30 0.00 4.85
554 693 2.097142 GGATCTGTTGTTGCATCTCAGC 59.903 50.000 12.38 5.34 0.00 4.26
555 694 3.374367 CAGGATCTGTTGTTGCATCTCAG 59.626 47.826 11.52 11.52 0.00 3.35
556 695 3.244665 ACAGGATCTGTTGTTGCATCTCA 60.245 43.478 0.00 0.00 42.59 3.27
557 696 3.341823 ACAGGATCTGTTGTTGCATCTC 58.658 45.455 0.00 0.00 42.59 2.75
558 697 3.430042 ACAGGATCTGTTGTTGCATCT 57.570 42.857 0.00 0.00 42.59 2.90
559 698 5.824904 ATTACAGGATCTGTTGTTGCATC 57.175 39.130 5.86 0.00 42.59 3.91
560 699 7.056006 TCATATTACAGGATCTGTTGTTGCAT 58.944 34.615 5.86 0.00 42.59 3.96
561 700 6.413892 TCATATTACAGGATCTGTTGTTGCA 58.586 36.000 5.86 0.00 42.59 4.08
562 701 6.925610 TCATATTACAGGATCTGTTGTTGC 57.074 37.500 5.86 0.00 42.59 4.17
563 702 9.334947 AGAATCATATTACAGGATCTGTTGTTG 57.665 33.333 5.86 1.10 42.59 3.33
564 703 9.911788 AAGAATCATATTACAGGATCTGTTGTT 57.088 29.630 5.86 0.00 42.59 2.83
565 704 9.334947 CAAGAATCATATTACAGGATCTGTTGT 57.665 33.333 5.86 3.87 42.59 3.32
566 705 9.334947 ACAAGAATCATATTACAGGATCTGTTG 57.665 33.333 5.86 0.00 42.59 3.33
567 706 9.911788 AACAAGAATCATATTACAGGATCTGTT 57.088 29.630 5.86 0.00 42.59 3.16
597 736 6.029346 AGAGATCATGTTGCGGAAATTTTT 57.971 33.333 0.00 0.00 0.00 1.94
598 737 5.649782 AGAGATCATGTTGCGGAAATTTT 57.350 34.783 0.00 0.00 0.00 1.82
599 738 5.882557 AGTAGAGATCATGTTGCGGAAATTT 59.117 36.000 0.00 0.00 0.00 1.82
600 739 5.295292 CAGTAGAGATCATGTTGCGGAAATT 59.705 40.000 0.00 0.00 0.00 1.82
601 740 4.813161 CAGTAGAGATCATGTTGCGGAAAT 59.187 41.667 0.00 0.00 0.00 2.17
602 741 4.183865 CAGTAGAGATCATGTTGCGGAAA 58.816 43.478 0.00 0.00 0.00 3.13
603 742 3.785486 CAGTAGAGATCATGTTGCGGAA 58.215 45.455 0.00 0.00 0.00 4.30
604 743 2.481969 GCAGTAGAGATCATGTTGCGGA 60.482 50.000 0.00 0.00 0.00 5.54
605 744 1.863454 GCAGTAGAGATCATGTTGCGG 59.137 52.381 0.00 0.00 0.00 5.69
606 745 2.543641 TGCAGTAGAGATCATGTTGCG 58.456 47.619 0.00 0.00 33.03 4.85
607 746 4.952262 TTTGCAGTAGAGATCATGTTGC 57.048 40.909 0.00 0.00 0.00 4.17
627 766 4.273969 TGCAGAAACGTCCGTAGAATTTTT 59.726 37.500 0.00 0.00 0.00 1.94
628 767 3.810941 TGCAGAAACGTCCGTAGAATTTT 59.189 39.130 0.00 0.00 0.00 1.82
629 768 3.395639 TGCAGAAACGTCCGTAGAATTT 58.604 40.909 0.00 0.00 0.00 1.82
630 769 2.993899 CTGCAGAAACGTCCGTAGAATT 59.006 45.455 8.42 0.00 0.00 2.17
631 770 2.607187 CTGCAGAAACGTCCGTAGAAT 58.393 47.619 8.42 0.00 0.00 2.40
632 771 1.933500 GCTGCAGAAACGTCCGTAGAA 60.934 52.381 20.43 0.00 0.00 2.10
633 772 0.388134 GCTGCAGAAACGTCCGTAGA 60.388 55.000 20.43 0.00 0.00 2.59
634 773 0.666274 TGCTGCAGAAACGTCCGTAG 60.666 55.000 20.43 0.00 0.00 3.51
635 774 0.037697 ATGCTGCAGAAACGTCCGTA 60.038 50.000 20.43 0.00 0.00 4.02
636 775 1.301716 ATGCTGCAGAAACGTCCGT 60.302 52.632 20.43 0.00 0.00 4.69
637 776 1.133253 CATGCTGCAGAAACGTCCG 59.867 57.895 20.43 0.00 0.00 4.79
638 777 0.166814 GTCATGCTGCAGAAACGTCC 59.833 55.000 20.43 0.00 0.00 4.79
639 778 0.166814 GGTCATGCTGCAGAAACGTC 59.833 55.000 20.43 0.19 0.00 4.34
640 779 0.250467 AGGTCATGCTGCAGAAACGT 60.250 50.000 20.43 1.24 0.00 3.99
641 780 0.445436 GAGGTCATGCTGCAGAAACG 59.555 55.000 20.43 2.50 0.00 3.60
642 781 1.818642 AGAGGTCATGCTGCAGAAAC 58.181 50.000 20.43 2.26 0.00 2.78
643 782 3.920231 ATAGAGGTCATGCTGCAGAAA 57.080 42.857 20.43 4.69 0.00 2.52
644 783 3.198417 TGAATAGAGGTCATGCTGCAGAA 59.802 43.478 20.43 7.68 0.00 3.02
645 784 2.767960 TGAATAGAGGTCATGCTGCAGA 59.232 45.455 20.43 2.70 0.00 4.26
646 785 3.189618 TGAATAGAGGTCATGCTGCAG 57.810 47.619 10.11 10.11 0.00 4.41
647 786 3.632643 TTGAATAGAGGTCATGCTGCA 57.367 42.857 4.13 4.13 0.00 4.41
648 787 4.970662 TTTTGAATAGAGGTCATGCTGC 57.029 40.909 0.00 0.00 0.00 5.25
692 831 7.712264 TTTTTCTTTTGCAACATAGACCATG 57.288 32.000 0.00 0.00 40.78 3.66
733 872 6.974932 TGCTGCAGATTGTTTTTACAAAAA 57.025 29.167 20.43 0.00 35.67 1.94
734 873 6.760298 TCATGCTGCAGATTGTTTTTACAAAA 59.240 30.769 20.43 0.00 32.94 2.44
735 874 6.200665 GTCATGCTGCAGATTGTTTTTACAAA 59.799 34.615 20.43 0.00 32.94 2.83
736 875 5.691305 GTCATGCTGCAGATTGTTTTTACAA 59.309 36.000 20.43 0.00 0.00 2.41
737 876 5.221880 GTCATGCTGCAGATTGTTTTTACA 58.778 37.500 20.43 1.35 0.00 2.41
738 877 4.622740 GGTCATGCTGCAGATTGTTTTTAC 59.377 41.667 20.43 7.16 0.00 2.01
739 878 4.523943 AGGTCATGCTGCAGATTGTTTTTA 59.476 37.500 20.43 0.00 0.00 1.52
740 879 3.322828 AGGTCATGCTGCAGATTGTTTTT 59.677 39.130 20.43 0.00 0.00 1.94
741 880 2.895404 AGGTCATGCTGCAGATTGTTTT 59.105 40.909 20.43 1.32 0.00 2.43
742 881 2.522185 AGGTCATGCTGCAGATTGTTT 58.478 42.857 20.43 1.65 0.00 2.83
743 882 2.211250 AGGTCATGCTGCAGATTGTT 57.789 45.000 20.43 1.99 0.00 2.83
744 883 2.211250 AAGGTCATGCTGCAGATTGT 57.789 45.000 20.43 0.00 0.00 2.71
745 884 2.230508 ACAAAGGTCATGCTGCAGATTG 59.769 45.455 20.43 13.85 0.00 2.67
746 885 2.522185 ACAAAGGTCATGCTGCAGATT 58.478 42.857 20.43 0.00 0.00 2.40
747 886 2.211250 ACAAAGGTCATGCTGCAGAT 57.789 45.000 20.43 5.31 0.00 2.90
748 887 1.610038 CAACAAAGGTCATGCTGCAGA 59.390 47.619 20.43 2.70 0.00 4.26
749 888 1.336517 CCAACAAAGGTCATGCTGCAG 60.337 52.381 10.11 10.11 0.00 4.41
750 889 0.675083 CCAACAAAGGTCATGCTGCA 59.325 50.000 4.13 4.13 0.00 4.41
751 890 0.961019 TCCAACAAAGGTCATGCTGC 59.039 50.000 0.00 0.00 0.00 5.25
752 891 2.507484 TCTCCAACAAAGGTCATGCTG 58.493 47.619 0.00 0.00 0.00 4.41
753 892 2.957402 TCTCCAACAAAGGTCATGCT 57.043 45.000 0.00 0.00 0.00 3.79
754 893 2.821969 ACATCTCCAACAAAGGTCATGC 59.178 45.455 0.00 0.00 0.00 4.06
755 894 5.242393 AGAAACATCTCCAACAAAGGTCATG 59.758 40.000 0.00 0.00 0.00 3.07
756 895 5.242393 CAGAAACATCTCCAACAAAGGTCAT 59.758 40.000 0.00 0.00 0.00 3.06
757 896 4.580167 CAGAAACATCTCCAACAAAGGTCA 59.420 41.667 0.00 0.00 0.00 4.02
758 897 4.557496 GCAGAAACATCTCCAACAAAGGTC 60.557 45.833 0.00 0.00 0.00 3.85
759 898 3.319122 GCAGAAACATCTCCAACAAAGGT 59.681 43.478 0.00 0.00 0.00 3.50
760 899 3.318839 TGCAGAAACATCTCCAACAAAGG 59.681 43.478 0.00 0.00 0.00 3.11
761 900 4.572985 TGCAGAAACATCTCCAACAAAG 57.427 40.909 0.00 0.00 0.00 2.77
762 901 4.159321 TGTTGCAGAAACATCTCCAACAAA 59.841 37.500 11.75 0.00 43.96 2.83
763 902 3.698539 TGTTGCAGAAACATCTCCAACAA 59.301 39.130 11.75 0.00 43.96 2.83
764 903 3.286353 TGTTGCAGAAACATCTCCAACA 58.714 40.909 10.44 10.44 43.96 3.33
765 904 3.988379 TGTTGCAGAAACATCTCCAAC 57.012 42.857 5.83 5.83 43.96 3.77
774 913 5.391312 AACAGGGATAATGTTGCAGAAAC 57.609 39.130 0.00 0.00 39.36 2.78
782 921 6.663093 TCAACTATTGCAACAGGGATAATGTT 59.337 34.615 9.97 0.00 41.47 2.71
783 922 6.186957 TCAACTATTGCAACAGGGATAATGT 58.813 36.000 9.97 0.00 0.00 2.71
784 923 6.238842 CCTCAACTATTGCAACAGGGATAATG 60.239 42.308 9.97 0.00 0.00 1.90
785 924 5.829924 CCTCAACTATTGCAACAGGGATAAT 59.170 40.000 9.97 0.00 0.00 1.28
786 925 5.192927 CCTCAACTATTGCAACAGGGATAA 58.807 41.667 9.97 0.00 0.00 1.75
787 926 4.385199 CCCTCAACTATTGCAACAGGGATA 60.385 45.833 9.97 0.00 41.36 2.59
788 927 3.624777 CCTCAACTATTGCAACAGGGAT 58.375 45.455 9.97 0.00 0.00 3.85
789 928 2.290896 CCCTCAACTATTGCAACAGGGA 60.291 50.000 9.97 5.50 41.36 4.20
790 929 2.094675 CCCTCAACTATTGCAACAGGG 58.905 52.381 9.97 9.82 35.52 4.45
791 930 2.489329 CACCCTCAACTATTGCAACAGG 59.511 50.000 9.97 4.79 0.00 4.00
792 931 2.095059 GCACCCTCAACTATTGCAACAG 60.095 50.000 2.42 2.42 33.24 3.16
793 932 1.885887 GCACCCTCAACTATTGCAACA 59.114 47.619 0.00 0.00 33.24 3.33
794 933 1.885887 TGCACCCTCAACTATTGCAAC 59.114 47.619 0.00 0.00 40.15 4.17
795 934 2.284754 TGCACCCTCAACTATTGCAA 57.715 45.000 0.00 0.00 40.15 4.08
796 935 2.284754 TTGCACCCTCAACTATTGCA 57.715 45.000 0.00 0.00 41.33 4.08
797 936 2.099756 GGATTGCACCCTCAACTATTGC 59.900 50.000 0.00 0.00 0.00 3.56
798 937 2.355756 CGGATTGCACCCTCAACTATTG 59.644 50.000 0.00 0.00 0.00 1.90
799 938 2.238646 TCGGATTGCACCCTCAACTATT 59.761 45.455 0.00 0.00 0.00 1.73
800 939 1.837439 TCGGATTGCACCCTCAACTAT 59.163 47.619 0.00 0.00 0.00 2.12
801 940 1.271856 TCGGATTGCACCCTCAACTA 58.728 50.000 0.00 0.00 0.00 2.24
802 941 0.620556 ATCGGATTGCACCCTCAACT 59.379 50.000 0.00 0.00 0.00 3.16
803 942 0.734889 CATCGGATTGCACCCTCAAC 59.265 55.000 0.00 0.00 0.00 3.18
804 943 0.617935 TCATCGGATTGCACCCTCAA 59.382 50.000 0.00 0.00 0.00 3.02
805 944 0.107703 GTCATCGGATTGCACCCTCA 60.108 55.000 0.00 0.00 0.00 3.86
806 945 1.154205 CGTCATCGGATTGCACCCTC 61.154 60.000 0.00 0.00 0.00 4.30
807 946 1.153369 CGTCATCGGATTGCACCCT 60.153 57.895 0.00 0.00 0.00 4.34
808 947 2.823829 GCGTCATCGGATTGCACCC 61.824 63.158 0.00 0.00 37.56 4.61
809 948 2.709475 GCGTCATCGGATTGCACC 59.291 61.111 0.00 0.00 37.56 5.01
810 949 2.040213 CTGGCGTCATCGGATTGCAC 62.040 60.000 0.00 0.00 37.56 4.57
811 950 1.815003 CTGGCGTCATCGGATTGCA 60.815 57.895 0.00 0.00 37.56 4.08
812 951 0.882042 ATCTGGCGTCATCGGATTGC 60.882 55.000 0.00 0.00 37.56 3.56
813 952 1.143305 GATCTGGCGTCATCGGATTG 58.857 55.000 0.00 0.00 37.56 2.67
814 953 1.043816 AGATCTGGCGTCATCGGATT 58.956 50.000 0.00 0.00 37.56 3.01
815 954 1.911057 TAGATCTGGCGTCATCGGAT 58.089 50.000 5.18 0.00 37.56 4.18
816 955 1.337071 GTTAGATCTGGCGTCATCGGA 59.663 52.381 5.18 0.00 37.56 4.55
817 956 1.772182 GTTAGATCTGGCGTCATCGG 58.228 55.000 5.18 0.00 37.56 4.18
818 957 1.399572 CGTTAGATCTGGCGTCATCG 58.600 55.000 5.18 0.00 40.37 3.84
819 958 1.772182 CCGTTAGATCTGGCGTCATC 58.228 55.000 5.18 0.00 0.00 2.92
820 959 0.249489 GCCGTTAGATCTGGCGTCAT 60.249 55.000 5.18 0.00 39.30 3.06
821 960 1.141019 GCCGTTAGATCTGGCGTCA 59.859 57.895 5.18 0.00 39.30 4.35
822 961 4.014065 GCCGTTAGATCTGGCGTC 57.986 61.111 5.18 0.00 39.30 5.19
826 965 1.658717 CGCGAGCCGTTAGATCTGG 60.659 63.158 0.00 0.00 0.00 3.86
827 966 1.658717 CCGCGAGCCGTTAGATCTG 60.659 63.158 8.23 0.00 34.38 2.90
828 967 2.722487 CCGCGAGCCGTTAGATCT 59.278 61.111 8.23 0.00 34.38 2.75
829 968 3.030882 GCCGCGAGCCGTTAGATC 61.031 66.667 8.23 0.00 34.35 2.75
844 983 1.033202 TTTAAAAGATCGGCCGGGCC 61.033 55.000 28.61 28.61 46.75 5.80
845 984 0.812549 TTTTAAAAGATCGGCCGGGC 59.187 50.000 27.83 20.04 0.00 6.13
846 985 2.750712 TCTTTTTAAAAGATCGGCCGGG 59.249 45.455 27.83 0.00 0.00 5.73
847 986 4.598062 GATCTTTTTAAAAGATCGGCCGG 58.402 43.478 31.59 6.80 41.99 6.13
854 993 4.438744 CGCCGGCTGATCTTTTTAAAAGAT 60.439 41.667 26.87 26.87 39.53 2.40
855 994 3.119990 CGCCGGCTGATCTTTTTAAAAGA 60.120 43.478 26.68 20.42 0.00 2.52
856 995 3.171277 CGCCGGCTGATCTTTTTAAAAG 58.829 45.455 26.68 10.89 0.00 2.27
857 996 2.094957 CCGCCGGCTGATCTTTTTAAAA 60.095 45.455 26.68 0.00 0.00 1.52
858 997 1.470890 CCGCCGGCTGATCTTTTTAAA 59.529 47.619 26.68 0.00 0.00 1.52
859 998 1.091537 CCGCCGGCTGATCTTTTTAA 58.908 50.000 26.68 0.00 0.00 1.52
860 999 0.250793 TCCGCCGGCTGATCTTTTTA 59.749 50.000 26.68 0.00 0.00 1.52
861 1000 1.002624 TCCGCCGGCTGATCTTTTT 60.003 52.632 26.68 0.00 0.00 1.94
862 1001 1.745489 GTCCGCCGGCTGATCTTTT 60.745 57.895 26.68 0.00 0.00 2.27
863 1002 2.125106 GTCCGCCGGCTGATCTTT 60.125 61.111 26.68 0.00 0.00 2.52
864 1003 4.514577 CGTCCGCCGGCTGATCTT 62.515 66.667 26.68 0.00 0.00 2.40
880 1019 4.451150 TTCAGGGGCTGCTACGCG 62.451 66.667 3.53 3.53 0.00 6.01
881 1020 2.512515 CTTCAGGGGCTGCTACGC 60.513 66.667 0.00 0.00 0.00 4.42
882 1021 1.142748 CTCTTCAGGGGCTGCTACG 59.857 63.158 0.00 0.00 0.00 3.51
883 1022 0.978146 TCCTCTTCAGGGGCTGCTAC 60.978 60.000 0.00 0.00 40.80 3.58
884 1023 0.252696 TTCCTCTTCAGGGGCTGCTA 60.253 55.000 0.00 0.00 40.80 3.49
885 1024 1.539869 TTCCTCTTCAGGGGCTGCT 60.540 57.895 0.00 0.00 40.80 4.24
886 1025 1.077858 CTTCCTCTTCAGGGGCTGC 60.078 63.158 0.00 0.00 40.80 5.25
887 1026 1.077858 GCTTCCTCTTCAGGGGCTG 60.078 63.158 0.00 0.00 40.80 4.85
888 1027 2.664081 CGCTTCCTCTTCAGGGGCT 61.664 63.158 0.00 0.00 40.80 5.19
889 1028 2.124942 CGCTTCCTCTTCAGGGGC 60.125 66.667 0.00 0.00 40.80 5.80
890 1029 1.842381 AACCGCTTCCTCTTCAGGGG 61.842 60.000 0.94 0.94 46.31 4.79
891 1030 0.674895 CAACCGCTTCCTCTTCAGGG 60.675 60.000 0.00 0.00 40.80 4.45
892 1031 0.035458 ACAACCGCTTCCTCTTCAGG 59.965 55.000 0.00 0.00 42.01 3.86
893 1032 1.801178 GAACAACCGCTTCCTCTTCAG 59.199 52.381 0.00 0.00 0.00 3.02
894 1033 1.416401 AGAACAACCGCTTCCTCTTCA 59.584 47.619 0.00 0.00 0.00 3.02
895 1034 2.171341 AGAACAACCGCTTCCTCTTC 57.829 50.000 0.00 0.00 0.00 2.87
900 1039 3.562557 TCTGTTTTAGAACAACCGCTTCC 59.437 43.478 0.03 0.00 44.65 3.46
915 1054 4.513318 CGCTCCTTCTTCTTTCTCTGTTTT 59.487 41.667 0.00 0.00 0.00 2.43
917 1056 3.556004 CCGCTCCTTCTTCTTTCTCTGTT 60.556 47.826 0.00 0.00 0.00 3.16
918 1057 2.028567 CCGCTCCTTCTTCTTTCTCTGT 60.029 50.000 0.00 0.00 0.00 3.41
919 1058 2.028567 ACCGCTCCTTCTTCTTTCTCTG 60.029 50.000 0.00 0.00 0.00 3.35
920 1059 2.252714 ACCGCTCCTTCTTCTTTCTCT 58.747 47.619 0.00 0.00 0.00 3.10
921 1060 2.753055 ACCGCTCCTTCTTCTTTCTC 57.247 50.000 0.00 0.00 0.00 2.87
923 1062 2.077627 GGAACCGCTCCTTCTTCTTTC 58.922 52.381 0.00 0.00 41.61 2.62
934 1073 1.197949 GCTCTTTTCTTGGAACCGCTC 59.802 52.381 0.00 0.00 0.00 5.03
945 1084 1.349357 GGGACTGGAGTGCTCTTTTCT 59.651 52.381 0.00 0.00 36.56 2.52
946 1085 1.072331 TGGGACTGGAGTGCTCTTTTC 59.928 52.381 0.00 0.00 36.56 2.29
951 1090 2.219325 CTCGTGGGACTGGAGTGCTC 62.219 65.000 0.00 0.00 36.56 4.26
1246 1452 4.096003 CAGGACGGGGGCGAACAT 62.096 66.667 0.00 0.00 0.00 2.71
1432 1644 1.987855 TCTTGAACTCCGGCGGGAT 60.988 57.895 27.98 11.97 42.83 3.85
1515 1727 3.589654 CTTGAACGGGCTGGAGCGA 62.590 63.158 0.00 0.00 43.26 4.93
1582 1794 0.907486 TCGGTCTCGGAGGAGTAGAA 59.093 55.000 4.96 0.00 41.26 2.10
1759 1980 3.491104 GGCCTCTGACTTGGTAGTTATCG 60.491 52.174 0.00 0.00 33.84 2.92
1800 2021 1.393539 CGGTAAAGCACTGGACGATTG 59.606 52.381 0.00 0.00 0.00 2.67
2178 2420 2.441164 GGAGAGAGAGAGGCCGCA 60.441 66.667 9.88 0.00 0.00 5.69
2342 2629 3.827898 GCTACCGCGCTCAGGAGT 61.828 66.667 5.56 0.00 0.00 3.85
2445 2833 2.342648 GACGACCACCTCCACCAC 59.657 66.667 0.00 0.00 0.00 4.16
2446 2834 3.299977 CGACGACCACCTCCACCA 61.300 66.667 0.00 0.00 0.00 4.17
2447 2835 2.348888 ATCGACGACCACCTCCACC 61.349 63.158 0.00 0.00 0.00 4.61
2448 2836 1.153823 CATCGACGACCACCTCCAC 60.154 63.158 0.00 0.00 0.00 4.02
2449 2837 1.303806 TCATCGACGACCACCTCCA 60.304 57.895 0.00 0.00 0.00 3.86
2450 2838 1.313812 ACTCATCGACGACCACCTCC 61.314 60.000 0.00 0.00 0.00 4.30
2451 2839 0.179161 CACTCATCGACGACCACCTC 60.179 60.000 0.00 0.00 0.00 3.85
2452 2840 1.595993 CCACTCATCGACGACCACCT 61.596 60.000 0.00 0.00 0.00 4.00
2453 2841 1.153823 CCACTCATCGACGACCACC 60.154 63.158 0.00 0.00 0.00 4.61
2454 2842 0.732880 CACCACTCATCGACGACCAC 60.733 60.000 0.00 0.00 0.00 4.16
2455 2843 1.584495 CACCACTCATCGACGACCA 59.416 57.895 0.00 0.00 0.00 4.02
2456 2844 1.153823 CCACCACTCATCGACGACC 60.154 63.158 0.00 0.00 0.00 4.79
2457 2845 0.179161 CTCCACCACTCATCGACGAC 60.179 60.000 0.00 0.00 0.00 4.34
2458 2846 1.313091 CCTCCACCACTCATCGACGA 61.313 60.000 0.00 0.00 0.00 4.20
2459 2847 1.139734 CCTCCACCACTCATCGACG 59.860 63.158 0.00 0.00 0.00 5.12
2460 2848 0.108615 CACCTCCACCACTCATCGAC 60.109 60.000 0.00 0.00 0.00 4.20
2461 2849 1.257750 CCACCTCCACCACTCATCGA 61.258 60.000 0.00 0.00 0.00 3.59
2462 2850 1.219124 CCACCTCCACCACTCATCG 59.781 63.158 0.00 0.00 0.00 3.84
2463 2851 1.078143 GCCACCTCCACCACTCATC 60.078 63.158 0.00 0.00 0.00 2.92
2464 2852 2.606587 GGCCACCTCCACCACTCAT 61.607 63.158 0.00 0.00 0.00 2.90
2465 2853 3.249189 GGCCACCTCCACCACTCA 61.249 66.667 0.00 0.00 0.00 3.41
2610 3001 2.487265 GCTTACTGTGGGACCCATATGG 60.487 54.545 18.51 15.41 35.28 2.74
2964 3359 3.859443 TGCCACATTTGAATGTTATGGC 58.141 40.909 21.01 21.01 46.95 4.40
3093 3497 5.163550 TGGTCGTATCCAAGTATCAGTTCTG 60.164 44.000 0.00 0.00 34.24 3.02
3094 3498 4.954202 TGGTCGTATCCAAGTATCAGTTCT 59.046 41.667 0.00 0.00 34.24 3.01
3106 3510 2.375014 TAGCATCCTGGTCGTATCCA 57.625 50.000 0.00 0.00 36.00 3.41
3140 3549 0.817654 TAGACAGTGCCGTCCAGATG 59.182 55.000 0.00 0.00 36.52 2.90
3239 3648 1.066858 ACAATCACCTGGCGTGTAGAG 60.067 52.381 0.00 0.00 43.51 2.43
3954 4643 0.449388 CAAATTCAGGACCAGCTCGC 59.551 55.000 0.00 0.00 0.00 5.03
4018 4707 3.181475 ACCAGATACACATAGGCAGAACG 60.181 47.826 0.00 0.00 0.00 3.95
4030 4723 6.281405 CCCATCTGTTACTAACCAGATACAC 58.719 44.000 2.13 0.00 32.14 2.90
4043 4736 4.535526 AACCAAATTGCCCATCTGTTAC 57.464 40.909 0.00 0.00 0.00 2.50
4052 4745 3.832490 ACCTAGAGAAAACCAAATTGCCC 59.168 43.478 0.00 0.00 0.00 5.36
4085 4780 1.538512 GCTCAATGAGAACTGCAGCAA 59.461 47.619 15.38 0.00 0.00 3.91
4131 4826 6.425577 TTTCAGGTAACATGTAAATACCGC 57.574 37.500 16.12 0.00 43.11 5.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.