Multiple sequence alignment - TraesCS2B01G093300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G093300 chr2B 100.000 2712 0 0 1 2712 53658587 53661298 0.000000e+00 5009.0
1 TraesCS2B01G093300 chr2B 93.758 817 50 1 1096 1911 53584255 53585071 0.000000e+00 1225.0
2 TraesCS2B01G093300 chr2B 82.064 1182 193 17 739 1911 53666331 53667502 0.000000e+00 990.0
3 TraesCS2B01G093300 chr2B 90.734 572 25 8 2150 2712 53645825 53646377 0.000000e+00 737.0
4 TraesCS2B01G093300 chr2B 90.504 337 32 0 739 1075 53583770 53584106 1.920000e-121 446.0
5 TraesCS2B01G093300 chr2B 86.364 264 30 3 3 260 53583516 53583779 1.590000e-72 283.0
6 TraesCS2B01G093300 chr2B 86.047 258 36 0 3 260 53666083 53666340 7.400000e-71 278.0
7 TraesCS2B01G093300 chr2B 90.741 108 10 0 1902 2009 697141594 697141487 7.830000e-31 145.0
8 TraesCS2B01G093300 chr2B 90.741 108 10 0 1902 2009 697156563 697156456 7.830000e-31 145.0
9 TraesCS2B01G093300 chr2B 89.815 108 11 0 1902 2009 697294260 697294153 3.640000e-29 139.0
10 TraesCS2B01G093300 chr2B 89.815 108 11 0 1902 2009 697340488 697340381 3.640000e-29 139.0
11 TraesCS2B01G093300 chr2B 90.385 104 10 0 1908 2011 53476211 53476108 1.310000e-28 137.0
12 TraesCS2B01G093300 chr2B 89.815 108 9 2 1912 2018 216064565 216064459 1.310000e-28 137.0
13 TraesCS2B01G093300 chrUn 91.970 1183 81 6 739 1911 24905213 24906391 0.000000e+00 1646.0
14 TraesCS2B01G093300 chrUn 88.390 1025 85 15 739 1729 24900939 24901963 0.000000e+00 1203.0
15 TraesCS2B01G093300 chrUn 82.727 1181 186 16 739 1911 24911442 24912612 0.000000e+00 1035.0
16 TraesCS2B01G093300 chrUn 88.414 725 65 13 2004 2712 24906389 24907110 0.000000e+00 856.0
17 TraesCS2B01G093300 chrUn 88.538 506 49 8 2008 2507 24902087 24902589 2.990000e-169 604.0
18 TraesCS2B01G093300 chrUn 93.798 258 16 0 3 260 24904965 24905222 3.270000e-104 388.0
19 TraesCS2B01G093300 chrUn 87.121 264 28 2 3 260 24900685 24900948 7.340000e-76 294.0
20 TraesCS2B01G093300 chrUn 86.538 260 35 0 1 260 24911192 24911451 1.230000e-73 287.0
21 TraesCS2B01G093300 chrUn 82.775 209 16 10 2495 2689 24902608 24902810 4.640000e-38 169.0
22 TraesCS2B01G093300 chr2A 92.843 992 69 2 739 1729 35654895 35655885 0.000000e+00 1437.0
23 TraesCS2B01G093300 chr2A 94.155 941 54 1 971 1911 35650164 35651103 0.000000e+00 1432.0
24 TraesCS2B01G093300 chr2A 86.606 1202 107 23 745 1911 35635020 35636202 0.000000e+00 1279.0
25 TraesCS2B01G093300 chr2A 86.364 726 45 22 2004 2708 35651101 35651793 0.000000e+00 743.0
26 TraesCS2B01G093300 chr2A 93.023 258 18 0 3 260 35654647 35654904 7.090000e-101 377.0
27 TraesCS2B01G093300 chr2A 87.594 266 24 4 1 260 35634761 35635023 1.580000e-77 300.0
28 TraesCS2B01G093300 chr2A 94.545 110 6 0 2396 2505 35636528 35636637 1.290000e-38 171.0
29 TraesCS2B01G093300 chr2A 91.667 48 3 1 1847 1893 35655948 35655995 6.270000e-07 65.8
30 TraesCS2B01G093300 chr3B 99.378 482 3 0 260 741 637616150 637615669 0.000000e+00 874.0
31 TraesCS2B01G093300 chr3B 98.545 481 7 0 260 740 564026572 564026092 0.000000e+00 850.0
32 TraesCS2B01G093300 chr3B 97.500 480 12 0 260 739 221532072 221531593 0.000000e+00 821.0
33 TraesCS2B01G093300 chr3B 90.000 110 9 2 1898 2005 487221485 487221376 1.010000e-29 141.0
34 TraesCS2B01G093300 chr6A 99.170 482 4 0 260 741 93440358 93440839 0.000000e+00 869.0
35 TraesCS2B01G093300 chr6A 98.958 480 5 0 260 739 108088770 108088291 0.000000e+00 859.0
36 TraesCS2B01G093300 chr6A 98.333 480 8 0 260 739 102348770 102348291 0.000000e+00 843.0
37 TraesCS2B01G093300 chr7A 94.845 485 25 0 257 741 464266147 464265663 0.000000e+00 758.0
38 TraesCS2B01G093300 chr5A 95.000 480 24 0 260 739 612708157 612707678 0.000000e+00 754.0
39 TraesCS2B01G093300 chr5A 93.939 495 30 0 251 745 707034464 707034958 0.000000e+00 749.0
40 TraesCS2B01G093300 chr5B 89.815 108 9 2 1912 2018 288005382 288005276 1.310000e-28 137.0
41 TraesCS2B01G093300 chr1B 89.815 108 9 2 1912 2018 486243223 486243117 1.310000e-28 137.0
42 TraesCS2B01G093300 chr3D 86.957 69 3 5 2079 2146 516187918 516187981 3.750000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G093300 chr2B 53658587 53661298 2711 False 5009.000000 5009 100.000000 1 2712 1 chr2B.!!$F2 2711
1 TraesCS2B01G093300 chr2B 53645825 53646377 552 False 737.000000 737 90.734000 2150 2712 1 chr2B.!!$F1 562
2 TraesCS2B01G093300 chr2B 53583516 53585071 1555 False 651.333333 1225 90.208667 3 1911 3 chr2B.!!$F3 1908
3 TraesCS2B01G093300 chr2B 53666083 53667502 1419 False 634.000000 990 84.055500 3 1911 2 chr2B.!!$F4 1908
4 TraesCS2B01G093300 chrUn 24900685 24907110 6425 False 737.142857 1646 88.715143 3 2712 7 chrUn.!!$F1 2709
5 TraesCS2B01G093300 chrUn 24911192 24912612 1420 False 661.000000 1035 84.632500 1 1911 2 chrUn.!!$F2 1910
6 TraesCS2B01G093300 chr2A 35650164 35655995 5831 False 810.960000 1437 91.610400 3 2708 5 chr2A.!!$F2 2705
7 TraesCS2B01G093300 chr2A 35634761 35636637 1876 False 583.333333 1279 89.581667 1 2505 3 chr2A.!!$F1 2504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 600 0.030638 CCTCACGTTTTGGCTGTTGG 59.969 55.0 0.0 0.0 0.0 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1991 11350 0.335361 ACCACATACTCCCTCCGTCT 59.665 55.0 0.0 0.0 0.0 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 2.202946 TGCAGTCGTTCCGCAACA 60.203 55.556 0.00 0.00 31.46 3.33
83 84 1.291877 GCAGTCGTTCCGCAACATCT 61.292 55.000 0.00 0.00 32.14 2.90
99 103 0.031616 ATCTGGGAGGAGGAGGTGAC 60.032 60.000 0.00 0.00 0.00 3.67
119 123 3.211963 GCCTCATCGCCGCCATTT 61.212 61.111 0.00 0.00 0.00 2.32
125 129 1.146041 ATCGCCGCCATTTCAGCTA 59.854 52.632 0.00 0.00 0.00 3.32
132 136 1.723870 CCATTTCAGCTAGTGCCGC 59.276 57.895 0.00 0.00 40.80 6.53
187 197 1.065551 CTCATCGCAGACATGACCGTA 59.934 52.381 0.00 0.00 42.51 4.02
203 213 3.220658 TACGCGCCATGATCGGGA 61.221 61.111 23.35 10.11 41.52 5.14
213 223 2.617788 CCATGATCGGGAACAGGTTCAA 60.618 50.000 13.62 0.00 41.20 2.69
223 233 1.672356 CAGGTTCAACAGGCGGGAG 60.672 63.158 0.00 0.00 0.00 4.30
253 263 2.520968 GTGCTCCAACAGGGGGTT 59.479 61.111 0.00 0.00 40.42 4.11
255 265 0.111639 GTGCTCCAACAGGGGGTTAA 59.888 55.000 0.00 0.00 40.42 2.01
256 266 0.404040 TGCTCCAACAGGGGGTTAAG 59.596 55.000 0.00 0.00 40.42 1.85
257 267 0.696501 GCTCCAACAGGGGGTTAAGA 59.303 55.000 0.00 0.00 40.42 2.10
258 268 1.285078 GCTCCAACAGGGGGTTAAGAT 59.715 52.381 0.00 0.00 40.42 2.40
259 269 2.684038 GCTCCAACAGGGGGTTAAGATC 60.684 54.545 0.00 0.00 40.42 2.75
260 270 2.576191 CTCCAACAGGGGGTTAAGATCA 59.424 50.000 0.00 0.00 37.72 2.92
261 271 3.197983 TCCAACAGGGGGTTAAGATCAT 58.802 45.455 0.00 0.00 37.72 2.45
262 272 4.376223 TCCAACAGGGGGTTAAGATCATA 58.624 43.478 0.00 0.00 37.72 2.15
263 273 4.412199 TCCAACAGGGGGTTAAGATCATAG 59.588 45.833 0.00 0.00 37.72 2.23
264 274 4.166144 CCAACAGGGGGTTAAGATCATAGT 59.834 45.833 0.00 0.00 37.72 2.12
265 275 5.340027 CCAACAGGGGGTTAAGATCATAGTT 60.340 44.000 0.00 0.00 37.72 2.24
266 276 5.373812 ACAGGGGGTTAAGATCATAGTTG 57.626 43.478 0.00 0.00 0.00 3.16
267 277 4.137543 CAGGGGGTTAAGATCATAGTTGC 58.862 47.826 0.00 0.00 0.00 4.17
268 278 3.138468 AGGGGGTTAAGATCATAGTTGCC 59.862 47.826 0.00 0.00 0.00 4.52
269 279 3.117663 GGGGGTTAAGATCATAGTTGCCA 60.118 47.826 0.00 0.00 0.00 4.92
270 280 4.447762 GGGGGTTAAGATCATAGTTGCCAT 60.448 45.833 0.00 0.00 0.00 4.40
271 281 4.520492 GGGGTTAAGATCATAGTTGCCATG 59.480 45.833 0.00 0.00 0.00 3.66
272 282 5.133221 GGGTTAAGATCATAGTTGCCATGT 58.867 41.667 0.00 0.00 0.00 3.21
273 283 5.594317 GGGTTAAGATCATAGTTGCCATGTT 59.406 40.000 0.00 0.00 0.00 2.71
274 284 6.096846 GGGTTAAGATCATAGTTGCCATGTTT 59.903 38.462 0.00 0.00 0.00 2.83
275 285 7.196331 GGTTAAGATCATAGTTGCCATGTTTC 58.804 38.462 0.00 0.00 0.00 2.78
276 286 5.841957 AAGATCATAGTTGCCATGTTTCC 57.158 39.130 0.00 0.00 0.00 3.13
277 287 3.879295 AGATCATAGTTGCCATGTTTCCG 59.121 43.478 0.00 0.00 0.00 4.30
278 288 2.364632 TCATAGTTGCCATGTTTCCGG 58.635 47.619 0.00 0.00 0.00 5.14
279 289 2.091541 CATAGTTGCCATGTTTCCGGT 58.908 47.619 0.00 0.00 0.00 5.28
280 290 3.055021 TCATAGTTGCCATGTTTCCGGTA 60.055 43.478 0.00 0.00 0.00 4.02
281 291 1.530323 AGTTGCCATGTTTCCGGTAC 58.470 50.000 0.00 1.45 0.00 3.34
294 304 2.267961 GGTACGGTGGGAGCAAGG 59.732 66.667 0.00 0.00 0.00 3.61
295 305 2.288025 GGTACGGTGGGAGCAAGGA 61.288 63.158 0.00 0.00 0.00 3.36
296 306 1.675219 GTACGGTGGGAGCAAGGAA 59.325 57.895 0.00 0.00 0.00 3.36
297 307 0.672711 GTACGGTGGGAGCAAGGAAC 60.673 60.000 0.00 0.00 0.00 3.62
298 308 2.162338 TACGGTGGGAGCAAGGAACG 62.162 60.000 0.00 0.00 0.00 3.95
299 309 2.359975 GGTGGGAGCAAGGAACGG 60.360 66.667 0.00 0.00 0.00 4.44
300 310 2.359975 GTGGGAGCAAGGAACGGG 60.360 66.667 0.00 0.00 0.00 5.28
301 311 2.528127 TGGGAGCAAGGAACGGGA 60.528 61.111 0.00 0.00 0.00 5.14
302 312 2.150719 TGGGAGCAAGGAACGGGAA 61.151 57.895 0.00 0.00 0.00 3.97
303 313 1.674651 GGGAGCAAGGAACGGGAAC 60.675 63.158 0.00 0.00 0.00 3.62
315 325 3.198582 GGGAACGAGGGACGAGAG 58.801 66.667 0.00 0.00 45.77 3.20
326 336 2.282251 ACGAGAGTCGGTGGCTGA 60.282 61.111 0.86 0.00 45.59 4.26
327 337 1.901948 ACGAGAGTCGGTGGCTGAA 60.902 57.895 0.86 0.00 45.59 3.02
328 338 1.289066 CGAGAGTCGGTGGCTGAAA 59.711 57.895 0.00 0.00 36.00 2.69
329 339 0.319555 CGAGAGTCGGTGGCTGAAAA 60.320 55.000 0.00 0.00 36.00 2.29
330 340 1.872237 CGAGAGTCGGTGGCTGAAAAA 60.872 52.381 0.00 0.00 36.00 1.94
349 359 4.645863 AAAAATAGGGTACAACGAGGGT 57.354 40.909 0.00 0.00 0.00 4.34
350 360 5.760484 AAAAATAGGGTACAACGAGGGTA 57.240 39.130 0.00 0.00 0.00 3.69
351 361 5.963214 AAAATAGGGTACAACGAGGGTAT 57.037 39.130 0.00 0.00 0.00 2.73
352 362 7.436320 AAAAATAGGGTACAACGAGGGTATA 57.564 36.000 0.00 0.00 0.00 1.47
353 363 6.410942 AAATAGGGTACAACGAGGGTATAC 57.589 41.667 0.00 0.00 0.00 1.47
354 364 3.386932 AGGGTACAACGAGGGTATACA 57.613 47.619 5.01 0.00 0.00 2.29
355 365 3.919834 AGGGTACAACGAGGGTATACAT 58.080 45.455 5.01 0.00 0.00 2.29
356 366 3.893813 AGGGTACAACGAGGGTATACATC 59.106 47.826 5.01 1.38 0.00 3.06
357 367 3.893813 GGGTACAACGAGGGTATACATCT 59.106 47.826 5.01 1.40 0.00 2.90
358 368 4.022503 GGGTACAACGAGGGTATACATCTC 60.023 50.000 5.01 9.79 0.00 2.75
359 369 4.826183 GGTACAACGAGGGTATACATCTCT 59.174 45.833 17.62 5.75 0.00 3.10
360 370 5.301298 GGTACAACGAGGGTATACATCTCTT 59.699 44.000 17.62 9.82 0.00 2.85
361 371 6.488006 GGTACAACGAGGGTATACATCTCTTA 59.512 42.308 17.62 6.47 0.00 2.10
362 372 6.636562 ACAACGAGGGTATACATCTCTTAG 57.363 41.667 17.62 11.68 0.00 2.18
363 373 6.363065 ACAACGAGGGTATACATCTCTTAGA 58.637 40.000 17.62 0.00 0.00 2.10
364 374 6.262720 ACAACGAGGGTATACATCTCTTAGAC 59.737 42.308 17.62 0.00 0.00 2.59
365 375 4.996122 ACGAGGGTATACATCTCTTAGACG 59.004 45.833 17.62 10.15 0.00 4.18
366 376 5.221601 ACGAGGGTATACATCTCTTAGACGA 60.222 44.000 17.62 0.00 0.00 4.20
367 377 5.699915 CGAGGGTATACATCTCTTAGACGAA 59.300 44.000 17.62 0.00 0.00 3.85
368 378 6.372103 CGAGGGTATACATCTCTTAGACGAAT 59.628 42.308 17.62 0.00 0.00 3.34
369 379 7.094720 CGAGGGTATACATCTCTTAGACGAATT 60.095 40.741 17.62 0.00 0.00 2.17
370 380 8.480133 AGGGTATACATCTCTTAGACGAATTT 57.520 34.615 5.01 0.00 0.00 1.82
371 381 8.925338 AGGGTATACATCTCTTAGACGAATTTT 58.075 33.333 5.01 0.00 0.00 1.82
372 382 9.543783 GGGTATACATCTCTTAGACGAATTTTT 57.456 33.333 5.01 0.00 0.00 1.94
401 411 2.389713 GACGCGATCCAATCCATTTG 57.610 50.000 15.93 0.00 34.93 2.32
413 423 4.920376 CAATCCATTTGGGTACGATGAAC 58.080 43.478 0.00 0.00 38.11 3.18
414 424 2.993937 TCCATTTGGGTACGATGAACC 58.006 47.619 0.00 0.00 38.11 3.62
418 428 3.302129 GGGTACGATGAACCCGGT 58.698 61.111 0.00 0.00 46.95 5.28
419 429 2.503775 GGGTACGATGAACCCGGTA 58.496 57.895 0.00 0.00 46.95 4.02
420 430 0.103026 GGGTACGATGAACCCGGTAC 59.897 60.000 0.00 0.00 46.95 3.34
434 444 3.879912 GGTACGGTATCATGGGTCG 57.120 57.895 0.00 0.00 0.00 4.79
435 445 1.321474 GGTACGGTATCATGGGTCGA 58.679 55.000 0.00 0.00 0.00 4.20
436 446 1.268899 GGTACGGTATCATGGGTCGAG 59.731 57.143 0.00 0.00 0.00 4.04
437 447 1.268899 GTACGGTATCATGGGTCGAGG 59.731 57.143 0.00 0.00 0.00 4.63
438 448 0.106369 ACGGTATCATGGGTCGAGGA 60.106 55.000 0.00 0.00 0.00 3.71
439 449 1.037493 CGGTATCATGGGTCGAGGAA 58.963 55.000 0.00 0.00 0.00 3.36
440 450 1.269621 CGGTATCATGGGTCGAGGAAC 60.270 57.143 0.00 0.00 0.00 3.62
441 451 1.269621 GGTATCATGGGTCGAGGAACG 60.270 57.143 0.00 0.00 44.09 3.95
442 452 0.387929 TATCATGGGTCGAGGAACGC 59.612 55.000 0.00 0.00 42.26 4.84
443 453 1.613317 ATCATGGGTCGAGGAACGCA 61.613 55.000 0.00 0.00 44.82 5.24
444 454 1.811266 CATGGGTCGAGGAACGCAG 60.811 63.158 0.00 0.00 44.09 5.18
465 475 2.701073 TCTTGAAGAACGACGACTCC 57.299 50.000 0.00 0.00 0.00 3.85
466 476 1.268899 TCTTGAAGAACGACGACTCCC 59.731 52.381 0.00 0.00 0.00 4.30
467 477 1.269998 CTTGAAGAACGACGACTCCCT 59.730 52.381 0.00 0.00 0.00 4.20
468 478 0.596577 TGAAGAACGACGACTCCCTG 59.403 55.000 0.00 0.00 0.00 4.45
469 479 0.879765 GAAGAACGACGACTCCCTGA 59.120 55.000 0.00 0.00 0.00 3.86
470 480 0.597072 AAGAACGACGACTCCCTGAC 59.403 55.000 0.00 0.00 0.00 3.51
471 481 1.154263 GAACGACGACTCCCTGACG 60.154 63.158 0.00 0.00 39.53 4.35
472 482 2.524636 GAACGACGACTCCCTGACGG 62.525 65.000 0.00 0.00 38.09 4.79
473 483 3.054503 CGACGACTCCCTGACGGT 61.055 66.667 0.00 0.00 38.09 4.83
474 484 2.876219 GACGACTCCCTGACGGTC 59.124 66.667 0.00 0.00 38.09 4.79
475 485 1.970114 GACGACTCCCTGACGGTCA 60.970 63.158 10.88 10.88 38.09 4.02
476 486 1.924320 GACGACTCCCTGACGGTCAG 61.924 65.000 27.29 27.29 43.91 3.51
477 487 2.574399 GACTCCCTGACGGTCAGC 59.426 66.667 28.50 13.53 42.98 4.26
478 488 2.203640 ACTCCCTGACGGTCAGCA 60.204 61.111 28.50 17.41 42.98 4.41
479 489 1.608717 GACTCCCTGACGGTCAGCAT 61.609 60.000 28.50 14.96 42.98 3.79
480 490 1.194781 ACTCCCTGACGGTCAGCATT 61.195 55.000 28.50 12.06 42.98 3.56
481 491 0.460987 CTCCCTGACGGTCAGCATTC 60.461 60.000 28.50 0.00 42.98 2.67
482 492 1.450312 CCCTGACGGTCAGCATTCC 60.450 63.158 28.50 0.00 42.98 3.01
483 493 1.599047 CCTGACGGTCAGCATTCCT 59.401 57.895 28.50 0.00 42.98 3.36
484 494 0.036010 CCTGACGGTCAGCATTCCTT 60.036 55.000 28.50 0.00 42.98 3.36
485 495 1.081892 CTGACGGTCAGCATTCCTTG 58.918 55.000 23.81 0.00 37.72 3.61
486 496 0.396435 TGACGGTCAGCATTCCTTGT 59.604 50.000 6.76 0.00 0.00 3.16
487 497 1.202758 TGACGGTCAGCATTCCTTGTT 60.203 47.619 6.76 0.00 0.00 2.83
488 498 1.197721 GACGGTCAGCATTCCTTGTTG 59.802 52.381 2.62 0.00 37.86 3.33
489 499 1.238439 CGGTCAGCATTCCTTGTTGT 58.762 50.000 0.00 0.00 37.75 3.32
490 500 1.608590 CGGTCAGCATTCCTTGTTGTT 59.391 47.619 0.00 0.00 37.75 2.83
491 501 2.811431 CGGTCAGCATTCCTTGTTGTTA 59.189 45.455 0.00 0.00 37.75 2.41
492 502 3.252215 CGGTCAGCATTCCTTGTTGTTAA 59.748 43.478 0.00 0.00 37.75 2.01
493 503 4.082787 CGGTCAGCATTCCTTGTTGTTAAT 60.083 41.667 0.00 0.00 37.75 1.40
494 504 5.163513 GGTCAGCATTCCTTGTTGTTAATG 58.836 41.667 0.00 0.00 37.75 1.90
495 505 5.163513 GTCAGCATTCCTTGTTGTTAATGG 58.836 41.667 0.00 0.00 37.75 3.16
496 506 5.048083 GTCAGCATTCCTTGTTGTTAATGGA 60.048 40.000 0.00 0.00 37.75 3.41
497 507 5.716228 TCAGCATTCCTTGTTGTTAATGGAT 59.284 36.000 0.00 0.00 37.75 3.41
498 508 6.038356 CAGCATTCCTTGTTGTTAATGGATC 58.962 40.000 0.00 0.00 32.34 3.36
499 509 5.127682 AGCATTCCTTGTTGTTAATGGATCC 59.872 40.000 4.20 4.20 31.46 3.36
500 510 5.682212 GCATTCCTTGTTGTTAATGGATCCC 60.682 44.000 9.90 0.00 31.46 3.85
501 511 4.946160 TCCTTGTTGTTAATGGATCCCT 57.054 40.909 9.90 0.00 0.00 4.20
502 512 5.269554 TCCTTGTTGTTAATGGATCCCTT 57.730 39.130 9.90 8.54 0.00 3.95
503 513 5.016173 TCCTTGTTGTTAATGGATCCCTTG 58.984 41.667 9.90 0.00 0.00 3.61
504 514 4.381932 CCTTGTTGTTAATGGATCCCTTGC 60.382 45.833 9.90 4.45 0.00 4.01
505 515 3.772387 TGTTGTTAATGGATCCCTTGCA 58.228 40.909 9.90 6.99 0.00 4.08
506 516 4.155709 TGTTGTTAATGGATCCCTTGCAA 58.844 39.130 9.90 12.27 0.00 4.08
507 517 4.776837 TGTTGTTAATGGATCCCTTGCAAT 59.223 37.500 9.90 0.00 0.00 3.56
508 518 5.248020 TGTTGTTAATGGATCCCTTGCAATT 59.752 36.000 9.90 3.59 0.00 2.32
509 519 6.438741 TGTTGTTAATGGATCCCTTGCAATTA 59.561 34.615 9.90 2.56 0.00 1.40
510 520 7.038729 TGTTGTTAATGGATCCCTTGCAATTAA 60.039 33.333 9.90 8.74 0.00 1.40
511 521 7.673641 TGTTAATGGATCCCTTGCAATTAAT 57.326 32.000 9.90 0.00 0.00 1.40
512 522 7.499292 TGTTAATGGATCCCTTGCAATTAATG 58.501 34.615 9.90 0.00 0.00 1.90
513 523 5.556006 AATGGATCCCTTGCAATTAATGG 57.444 39.130 9.90 0.00 0.00 3.16
514 524 4.262891 TGGATCCCTTGCAATTAATGGA 57.737 40.909 9.90 1.92 0.00 3.41
515 525 3.960102 TGGATCCCTTGCAATTAATGGAC 59.040 43.478 9.90 0.00 29.04 4.02
516 526 4.218312 GGATCCCTTGCAATTAATGGACT 58.782 43.478 0.00 0.00 29.04 3.85
517 527 4.651045 GGATCCCTTGCAATTAATGGACTT 59.349 41.667 0.00 0.00 29.04 3.01
518 528 5.452356 GGATCCCTTGCAATTAATGGACTTG 60.452 44.000 0.00 0.00 29.04 3.16
519 529 4.671831 TCCCTTGCAATTAATGGACTTGA 58.328 39.130 0.00 0.00 0.00 3.02
520 530 4.706476 TCCCTTGCAATTAATGGACTTGAG 59.294 41.667 0.00 0.00 0.00 3.02
521 531 4.706476 CCCTTGCAATTAATGGACTTGAGA 59.294 41.667 0.00 0.00 0.00 3.27
522 532 5.185635 CCCTTGCAATTAATGGACTTGAGAA 59.814 40.000 0.00 0.00 0.00 2.87
523 533 6.295236 CCCTTGCAATTAATGGACTTGAGAAA 60.295 38.462 0.00 0.00 0.00 2.52
524 534 6.810182 CCTTGCAATTAATGGACTTGAGAAAG 59.190 38.462 0.00 0.00 0.00 2.62
525 535 7.309377 CCTTGCAATTAATGGACTTGAGAAAGA 60.309 37.037 0.00 0.00 0.00 2.52
526 536 7.523293 TGCAATTAATGGACTTGAGAAAGAA 57.477 32.000 0.00 0.00 0.00 2.52
527 537 8.125978 TGCAATTAATGGACTTGAGAAAGAAT 57.874 30.769 0.00 0.00 0.00 2.40
528 538 8.030692 TGCAATTAATGGACTTGAGAAAGAATG 58.969 33.333 0.00 0.00 0.00 2.67
529 539 8.246180 GCAATTAATGGACTTGAGAAAGAATGA 58.754 33.333 0.00 0.00 0.00 2.57
530 540 9.784680 CAATTAATGGACTTGAGAAAGAATGAG 57.215 33.333 0.00 0.00 0.00 2.90
531 541 7.928307 TTAATGGACTTGAGAAAGAATGAGG 57.072 36.000 0.00 0.00 0.00 3.86
532 542 5.768980 ATGGACTTGAGAAAGAATGAGGA 57.231 39.130 0.00 0.00 0.00 3.71
533 543 5.157940 TGGACTTGAGAAAGAATGAGGAG 57.842 43.478 0.00 0.00 0.00 3.69
534 544 4.594920 TGGACTTGAGAAAGAATGAGGAGT 59.405 41.667 0.00 0.00 0.00 3.85
535 545 5.072329 TGGACTTGAGAAAGAATGAGGAGTT 59.928 40.000 0.00 0.00 0.00 3.01
536 546 5.641636 GGACTTGAGAAAGAATGAGGAGTTC 59.358 44.000 0.00 0.00 0.00 3.01
537 547 6.432403 ACTTGAGAAAGAATGAGGAGTTCT 57.568 37.500 0.00 0.00 37.52 3.01
538 548 6.836242 ACTTGAGAAAGAATGAGGAGTTCTT 58.164 36.000 0.00 0.00 45.23 2.52
539 549 6.709846 ACTTGAGAAAGAATGAGGAGTTCTTG 59.290 38.462 2.27 0.00 43.19 3.02
540 550 6.425210 TGAGAAAGAATGAGGAGTTCTTGA 57.575 37.500 2.27 0.00 43.19 3.02
541 551 6.462500 TGAGAAAGAATGAGGAGTTCTTGAG 58.538 40.000 2.27 0.00 43.19 3.02
542 552 6.268617 TGAGAAAGAATGAGGAGTTCTTGAGA 59.731 38.462 2.27 0.00 43.19 3.27
543 553 7.072263 AGAAAGAATGAGGAGTTCTTGAGAA 57.928 36.000 2.27 0.00 43.19 2.87
544 554 7.512992 AGAAAGAATGAGGAGTTCTTGAGAAA 58.487 34.615 2.27 0.00 43.19 2.52
545 555 7.995488 AGAAAGAATGAGGAGTTCTTGAGAAAA 59.005 33.333 2.27 0.00 43.19 2.29
546 556 7.742556 AAGAATGAGGAGTTCTTGAGAAAAG 57.257 36.000 0.73 0.00 42.58 2.27
547 557 7.072263 AGAATGAGGAGTTCTTGAGAAAAGA 57.928 36.000 0.00 0.00 35.58 2.52
548 558 7.512992 AGAATGAGGAGTTCTTGAGAAAAGAA 58.487 34.615 0.00 0.00 35.58 2.52
549 559 7.995488 AGAATGAGGAGTTCTTGAGAAAAGAAA 59.005 33.333 2.27 0.00 37.93 2.52
550 560 6.927294 TGAGGAGTTCTTGAGAAAAGAAAC 57.073 37.500 2.27 1.30 37.93 2.78
551 561 5.523916 TGAGGAGTTCTTGAGAAAAGAAACG 59.476 40.000 2.27 0.00 37.93 3.60
552 562 5.671493 AGGAGTTCTTGAGAAAAGAAACGA 58.329 37.500 2.27 0.00 37.93 3.85
553 563 5.524281 AGGAGTTCTTGAGAAAAGAAACGAC 59.476 40.000 2.27 0.00 37.93 4.34
554 564 5.293569 GGAGTTCTTGAGAAAAGAAACGACA 59.706 40.000 2.27 0.00 37.93 4.35
555 565 6.017852 GGAGTTCTTGAGAAAAGAAACGACAT 60.018 38.462 2.27 0.00 37.93 3.06
556 566 6.949449 AGTTCTTGAGAAAAGAAACGACATC 58.051 36.000 2.27 0.00 37.93 3.06
557 567 5.576337 TCTTGAGAAAAGAAACGACATCG 57.424 39.130 0.00 0.00 46.33 3.84
558 568 6.509677 GTTCTTGAGAAAAGAAACGACATCGT 60.510 38.462 0.00 0.00 44.62 3.73
559 569 8.445004 GTTCTTGAGAAAAGAAACGACATCGTG 61.445 40.741 7.84 0.00 43.12 4.35
572 582 5.006649 CGACATCGTGAGTAAATTATGCC 57.993 43.478 0.00 0.00 34.11 4.40
573 583 4.745125 CGACATCGTGAGTAAATTATGCCT 59.255 41.667 0.00 0.00 34.11 4.75
574 584 5.107837 CGACATCGTGAGTAAATTATGCCTC 60.108 44.000 0.00 0.00 34.11 4.70
575 585 5.670485 ACATCGTGAGTAAATTATGCCTCA 58.330 37.500 0.00 0.00 0.00 3.86
576 586 5.523916 ACATCGTGAGTAAATTATGCCTCAC 59.476 40.000 10.45 10.45 46.49 3.51
579 589 5.796350 GTGAGTAAATTATGCCTCACGTT 57.204 39.130 6.52 0.00 42.89 3.99
580 590 6.178239 GTGAGTAAATTATGCCTCACGTTT 57.822 37.500 6.52 0.00 42.89 3.60
581 591 6.608610 GTGAGTAAATTATGCCTCACGTTTT 58.391 36.000 6.52 0.00 42.89 2.43
582 592 6.523201 GTGAGTAAATTATGCCTCACGTTTTG 59.477 38.462 6.52 0.00 42.89 2.44
583 593 5.949735 AGTAAATTATGCCTCACGTTTTGG 58.050 37.500 0.00 0.00 0.00 3.28
584 594 2.939460 ATTATGCCTCACGTTTTGGC 57.061 45.000 14.21 14.21 46.26 4.52
585 595 1.904287 TTATGCCTCACGTTTTGGCT 58.096 45.000 19.61 10.66 46.23 4.75
586 596 1.164411 TATGCCTCACGTTTTGGCTG 58.836 50.000 19.61 0.00 46.23 4.85
587 597 0.823356 ATGCCTCACGTTTTGGCTGT 60.823 50.000 19.61 9.25 46.23 4.40
588 598 1.034838 TGCCTCACGTTTTGGCTGTT 61.035 50.000 19.61 0.00 46.23 3.16
589 599 0.594796 GCCTCACGTTTTGGCTGTTG 60.595 55.000 13.92 0.00 43.05 3.33
590 600 0.030638 CCTCACGTTTTGGCTGTTGG 59.969 55.000 0.00 0.00 0.00 3.77
591 601 1.021202 CTCACGTTTTGGCTGTTGGA 58.979 50.000 0.00 0.00 0.00 3.53
592 602 1.608590 CTCACGTTTTGGCTGTTGGAT 59.391 47.619 0.00 0.00 0.00 3.41
593 603 1.606668 TCACGTTTTGGCTGTTGGATC 59.393 47.619 0.00 0.00 0.00 3.36
594 604 0.958822 ACGTTTTGGCTGTTGGATCC 59.041 50.000 4.20 4.20 0.00 3.36
595 605 1.247567 CGTTTTGGCTGTTGGATCCT 58.752 50.000 14.23 0.00 0.00 3.24
596 606 1.068333 CGTTTTGGCTGTTGGATCCTG 60.068 52.381 14.23 1.92 0.00 3.86
597 607 2.238521 GTTTTGGCTGTTGGATCCTGA 58.761 47.619 14.23 0.00 0.00 3.86
598 608 2.627699 GTTTTGGCTGTTGGATCCTGAA 59.372 45.455 14.23 0.00 0.00 3.02
599 609 2.673775 TTGGCTGTTGGATCCTGAAA 57.326 45.000 14.23 0.00 0.00 2.69
600 610 2.905415 TGGCTGTTGGATCCTGAAAT 57.095 45.000 14.23 0.00 0.00 2.17
601 611 2.726821 TGGCTGTTGGATCCTGAAATC 58.273 47.619 14.23 0.00 0.00 2.17
602 612 2.309755 TGGCTGTTGGATCCTGAAATCT 59.690 45.455 14.23 0.00 0.00 2.40
603 613 2.686915 GGCTGTTGGATCCTGAAATCTG 59.313 50.000 14.23 0.00 0.00 2.90
604 614 3.614092 GCTGTTGGATCCTGAAATCTGA 58.386 45.455 14.23 0.00 0.00 3.27
605 615 4.012374 GCTGTTGGATCCTGAAATCTGAA 58.988 43.478 14.23 0.00 0.00 3.02
606 616 4.643784 GCTGTTGGATCCTGAAATCTGAAT 59.356 41.667 14.23 0.00 0.00 2.57
607 617 5.221009 GCTGTTGGATCCTGAAATCTGAATC 60.221 44.000 14.23 0.00 0.00 2.52
608 618 4.877823 TGTTGGATCCTGAAATCTGAATCG 59.122 41.667 14.23 0.00 0.00 3.34
609 619 5.118990 GTTGGATCCTGAAATCTGAATCGA 58.881 41.667 14.23 0.00 0.00 3.59
610 620 4.953667 TGGATCCTGAAATCTGAATCGAG 58.046 43.478 14.23 0.00 0.00 4.04
611 621 4.202295 TGGATCCTGAAATCTGAATCGAGG 60.202 45.833 14.23 0.00 0.00 4.63
612 622 4.039730 GGATCCTGAAATCTGAATCGAGGA 59.960 45.833 3.84 0.00 31.83 3.71
613 623 4.662468 TCCTGAAATCTGAATCGAGGAG 57.338 45.455 0.00 0.00 0.00 3.69
614 624 3.129871 CCTGAAATCTGAATCGAGGAGC 58.870 50.000 0.00 0.00 0.00 4.70
615 625 3.431346 CCTGAAATCTGAATCGAGGAGCA 60.431 47.826 0.00 0.00 0.00 4.26
616 626 3.790091 TGAAATCTGAATCGAGGAGCAG 58.210 45.455 0.00 0.00 0.00 4.24
617 627 2.906691 AATCTGAATCGAGGAGCAGG 57.093 50.000 0.00 0.00 0.00 4.85
618 628 0.392336 ATCTGAATCGAGGAGCAGGC 59.608 55.000 0.00 0.00 0.00 4.85
619 629 0.685785 TCTGAATCGAGGAGCAGGCT 60.686 55.000 0.00 0.00 0.00 4.58
620 630 0.530211 CTGAATCGAGGAGCAGGCTG 60.530 60.000 10.94 10.94 0.00 4.85
621 631 1.886777 GAATCGAGGAGCAGGCTGC 60.887 63.158 31.56 31.56 45.46 5.25
639 649 2.582436 GGGGACGCCGAATCTTCA 59.418 61.111 0.00 0.00 0.00 3.02
640 650 1.146263 GGGGACGCCGAATCTTCAT 59.854 57.895 0.00 0.00 0.00 2.57
641 651 0.880718 GGGGACGCCGAATCTTCATC 60.881 60.000 0.00 0.00 0.00 2.92
642 652 1.215655 GGGACGCCGAATCTTCATCG 61.216 60.000 0.00 0.00 39.92 3.84
643 653 0.248907 GGACGCCGAATCTTCATCGA 60.249 55.000 0.00 0.00 42.76 3.59
644 654 1.556564 GACGCCGAATCTTCATCGAA 58.443 50.000 0.00 0.00 42.76 3.71
645 655 2.128035 GACGCCGAATCTTCATCGAAT 58.872 47.619 0.00 0.00 42.76 3.34
646 656 2.128035 ACGCCGAATCTTCATCGAATC 58.872 47.619 0.00 0.00 42.76 2.52
647 657 1.123217 CGCCGAATCTTCATCGAATCG 59.877 52.381 0.00 0.00 42.76 3.34
648 658 2.128035 GCCGAATCTTCATCGAATCGT 58.872 47.619 1.52 0.00 42.76 3.73
649 659 3.305964 GCCGAATCTTCATCGAATCGTA 58.694 45.455 1.52 0.00 42.76 3.43
650 660 3.119792 GCCGAATCTTCATCGAATCGTAC 59.880 47.826 1.52 0.00 42.76 3.67
651 661 3.669122 CCGAATCTTCATCGAATCGTACC 59.331 47.826 1.52 0.00 42.76 3.34
652 662 3.358115 CGAATCTTCATCGAATCGTACCG 59.642 47.826 1.52 0.00 42.76 4.02
653 663 4.534168 GAATCTTCATCGAATCGTACCGA 58.466 43.478 1.52 0.00 41.13 4.69
654 664 4.563337 ATCTTCATCGAATCGTACCGAA 57.437 40.909 1.52 1.15 39.99 4.30
655 665 4.563337 TCTTCATCGAATCGTACCGAAT 57.437 40.909 1.52 0.00 39.99 3.34
656 666 4.534168 TCTTCATCGAATCGTACCGAATC 58.466 43.478 1.52 0.00 39.99 2.52
657 667 3.278367 TCATCGAATCGTACCGAATCC 57.722 47.619 1.52 0.00 39.99 3.01
658 668 1.976728 CATCGAATCGTACCGAATCCG 59.023 52.381 1.52 0.00 39.99 4.18
659 669 1.298602 TCGAATCGTACCGAATCCGA 58.701 50.000 1.52 0.00 39.99 4.55
660 670 1.003545 TCGAATCGTACCGAATCCGAC 60.004 52.381 1.52 0.00 39.99 4.79
661 671 1.763634 GAATCGTACCGAATCCGACC 58.236 55.000 0.00 0.00 39.99 4.79
662 672 1.336125 GAATCGTACCGAATCCGACCT 59.664 52.381 0.00 0.00 39.99 3.85
663 673 0.950116 ATCGTACCGAATCCGACCTC 59.050 55.000 0.00 0.00 39.99 3.85
664 674 1.010350 CGTACCGAATCCGACCTCG 60.010 63.158 0.00 0.00 38.22 4.63
665 675 1.709147 CGTACCGAATCCGACCTCGT 61.709 60.000 0.00 0.00 38.22 4.18
666 676 0.453390 GTACCGAATCCGACCTCGTT 59.547 55.000 0.00 0.00 38.22 3.85
667 677 0.734889 TACCGAATCCGACCTCGTTC 59.265 55.000 0.00 0.00 38.22 3.95
668 678 1.226888 CCGAATCCGACCTCGTTCC 60.227 63.158 0.00 0.00 38.22 3.62
669 679 1.226888 CGAATCCGACCTCGTTCCC 60.227 63.158 0.00 0.00 38.22 3.97
670 680 1.226888 GAATCCGACCTCGTTCCCG 60.227 63.158 0.00 0.00 37.74 5.14
671 681 1.660560 GAATCCGACCTCGTTCCCGA 61.661 60.000 0.00 0.00 41.73 5.14
672 682 1.252904 AATCCGACCTCGTTCCCGAA 61.253 55.000 0.00 0.00 43.69 4.30
673 683 1.041447 ATCCGACCTCGTTCCCGAAT 61.041 55.000 0.00 0.00 43.69 3.34
674 684 1.226888 CCGACCTCGTTCCCGAATC 60.227 63.158 0.00 0.00 43.69 2.52
675 685 1.226888 CGACCTCGTTCCCGAATCC 60.227 63.158 0.00 0.00 43.69 3.01
676 686 1.226888 GACCTCGTTCCCGAATCCG 60.227 63.158 0.00 0.00 43.69 4.18
677 687 1.660560 GACCTCGTTCCCGAATCCGA 61.661 60.000 0.00 0.00 43.69 4.55
678 688 1.041447 ACCTCGTTCCCGAATCCGAT 61.041 55.000 0.00 0.00 43.69 4.18
679 689 0.104304 CCTCGTTCCCGAATCCGATT 59.896 55.000 0.00 0.00 43.69 3.34
680 690 1.488527 CTCGTTCCCGAATCCGATTC 58.511 55.000 10.64 10.64 43.69 2.52
681 691 0.103572 TCGTTCCCGAATCCGATTCC 59.896 55.000 14.28 0.92 40.86 3.01
682 692 1.213094 CGTTCCCGAATCCGATTCCG 61.213 60.000 14.28 8.61 38.22 4.30
693 703 3.588277 CGATTCCGGGTCGATGAAT 57.412 52.632 20.80 3.31 41.40 2.57
694 704 1.419374 CGATTCCGGGTCGATGAATC 58.581 55.000 20.80 11.06 41.40 2.52
713 723 2.203451 GGATCGAGGGACGGCCTA 60.203 66.667 7.57 0.00 42.82 3.93
714 724 2.562876 GGATCGAGGGACGGCCTAC 61.563 68.421 7.57 0.00 42.82 3.18
715 725 2.521224 ATCGAGGGACGGCCTACC 60.521 66.667 7.57 3.54 42.82 3.18
725 735 3.709633 GGCCTACCGTTCCCCGTT 61.710 66.667 0.00 0.00 33.66 4.44
726 736 2.348620 GCCTACCGTTCCCCGTTT 59.651 61.111 0.00 0.00 33.66 3.60
727 737 1.742880 GCCTACCGTTCCCCGTTTC 60.743 63.158 0.00 0.00 33.66 2.78
728 738 1.078918 CCTACCGTTCCCCGTTTCC 60.079 63.158 0.00 0.00 33.66 3.13
729 739 1.446618 CTACCGTTCCCCGTTTCCG 60.447 63.158 0.00 0.00 33.66 4.30
741 751 2.304751 CGTTTCCGGCTACTATGGTT 57.695 50.000 0.00 0.00 0.00 3.67
742 752 3.441496 CGTTTCCGGCTACTATGGTTA 57.559 47.619 0.00 0.00 0.00 2.85
743 753 3.784338 CGTTTCCGGCTACTATGGTTAA 58.216 45.455 0.00 0.00 0.00 2.01
750 760 4.283722 CCGGCTACTATGGTTAAGATCCTT 59.716 45.833 0.00 0.00 0.00 3.36
753 763 5.927115 GGCTACTATGGTTAAGATCCTTTCG 59.073 44.000 0.00 0.00 0.00 3.46
766 776 2.056359 TCCTTTCGGGGTTTAACCTCA 58.944 47.619 14.96 0.00 39.25 3.86
771 781 0.107848 CGGGGTTTAACCTCAGCGAT 60.108 55.000 14.96 0.00 39.25 4.58
783 793 0.757188 TCAGCGATCTCTTCCCCTCC 60.757 60.000 0.00 0.00 0.00 4.30
787 797 0.187361 CGATCTCTTCCCCTCCTCCT 59.813 60.000 0.00 0.00 0.00 3.69
801 811 3.302347 CTCCTGGCTCGTCGGCTTT 62.302 63.158 5.82 0.00 39.32 3.51
804 814 1.961277 CTGGCTCGTCGGCTTTGTT 60.961 57.895 5.82 0.00 39.32 2.83
867 877 2.202663 GAGCTCATCGACTGCGCA 60.203 61.111 10.98 10.98 38.07 6.09
967 977 1.333177 GGACGTGCTCCTCAGGATAT 58.667 55.000 0.00 0.00 35.89 1.63
1017 1027 1.389609 CCATGGGAGCCATCAAGTGC 61.390 60.000 2.85 0.00 43.15 4.40
1059 1074 4.142687 CGCCCGACTAATTGTTTTCATTCT 60.143 41.667 0.00 0.00 0.00 2.40
1060 1075 5.064198 CGCCCGACTAATTGTTTTCATTCTA 59.936 40.000 0.00 0.00 0.00 2.10
1209 1353 1.961793 AAAGCACAAGCCGAAGTACA 58.038 45.000 0.00 0.00 43.56 2.90
1298 6405 0.534412 CATCAAGGAGACGCTCAGGT 59.466 55.000 8.71 0.00 31.08 4.00
1351 6458 3.281240 CCCACTGAGGCATGCAAC 58.719 61.111 21.36 12.96 35.39 4.17
1411 6518 1.374252 GAACACGTGGGCGATCTGT 60.374 57.895 21.57 0.00 42.00 3.41
1491 6598 2.693074 GCAAAGTGGACTTCAAGGGAAA 59.307 45.455 0.00 0.00 34.61 3.13
1695 11042 2.309528 TACCTGCATGCTAAAGTCCG 57.690 50.000 20.33 0.00 0.00 4.79
1729 11076 1.449246 GCGCCTGCTTCAGATGTCT 60.449 57.895 0.00 0.00 38.39 3.41
1730 11077 0.179100 GCGCCTGCTTCAGATGTCTA 60.179 55.000 0.00 0.00 38.39 2.59
1843 11199 7.715249 GTGTCATGGTGGTAATCATAGTAATGT 59.285 37.037 0.00 0.00 34.50 2.71
1921 11280 8.884124 TTGATTATCAAATATTCCCTCCATCC 57.116 34.615 5.03 0.00 32.71 3.51
1922 11281 7.413446 TGATTATCAAATATTCCCTCCATCCC 58.587 38.462 0.00 0.00 0.00 3.85
1923 11282 6.795192 TTATCAAATATTCCCTCCATCCCA 57.205 37.500 0.00 0.00 0.00 4.37
1924 11283 5.684853 ATCAAATATTCCCTCCATCCCAA 57.315 39.130 0.00 0.00 0.00 4.12
1925 11284 5.684853 TCAAATATTCCCTCCATCCCAAT 57.315 39.130 0.00 0.00 0.00 3.16
1926 11285 6.795192 TCAAATATTCCCTCCATCCCAATA 57.205 37.500 0.00 0.00 0.00 1.90
1927 11286 7.361004 TCAAATATTCCCTCCATCCCAATAT 57.639 36.000 0.00 0.00 0.00 1.28
1928 11287 8.475445 TCAAATATTCCCTCCATCCCAATATA 57.525 34.615 0.00 0.00 0.00 0.86
1929 11288 8.910188 TCAAATATTCCCTCCATCCCAATATAA 58.090 33.333 0.00 0.00 0.00 0.98
1930 11289 9.193806 CAAATATTCCCTCCATCCCAATATAAG 57.806 37.037 0.00 0.00 0.00 1.73
1931 11290 8.482378 AATATTCCCTCCATCCCAATATAAGT 57.518 34.615 0.00 0.00 0.00 2.24
1932 11291 5.582950 TTCCCTCCATCCCAATATAAGTG 57.417 43.478 0.00 0.00 0.00 3.16
1933 11292 4.577096 TCCCTCCATCCCAATATAAGTGT 58.423 43.478 0.00 0.00 0.00 3.55
1934 11293 4.597507 TCCCTCCATCCCAATATAAGTGTC 59.402 45.833 0.00 0.00 0.00 3.67
1935 11294 4.599241 CCCTCCATCCCAATATAAGTGTCT 59.401 45.833 0.00 0.00 0.00 3.41
1936 11295 5.073691 CCCTCCATCCCAATATAAGTGTCTT 59.926 44.000 0.00 0.00 0.00 3.01
1937 11296 6.272324 CCCTCCATCCCAATATAAGTGTCTTA 59.728 42.308 0.00 0.00 0.00 2.10
1938 11297 7.202186 CCCTCCATCCCAATATAAGTGTCTTAA 60.202 40.741 0.00 0.00 0.00 1.85
1939 11298 7.661847 CCTCCATCCCAATATAAGTGTCTTAAC 59.338 40.741 0.00 0.00 0.00 2.01
1940 11299 8.331931 TCCATCCCAATATAAGTGTCTTAACT 57.668 34.615 0.00 0.00 0.00 2.24
1941 11300 8.778059 TCCATCCCAATATAAGTGTCTTAACTT 58.222 33.333 0.00 0.00 42.89 2.66
1942 11301 9.408648 CCATCCCAATATAAGTGTCTTAACTTT 57.591 33.333 0.00 0.00 40.77 2.66
1944 11303 9.975218 ATCCCAATATAAGTGTCTTAACTTTGT 57.025 29.630 0.00 0.00 40.77 2.83
1952 11311 9.857957 ATAAGTGTCTTAACTTTGTACTAGCTC 57.142 33.333 0.00 0.00 40.77 4.09
1953 11312 7.527568 AGTGTCTTAACTTTGTACTAGCTCT 57.472 36.000 0.00 0.00 0.00 4.09
1954 11313 8.632906 AGTGTCTTAACTTTGTACTAGCTCTA 57.367 34.615 0.00 0.00 0.00 2.43
1955 11314 8.732531 AGTGTCTTAACTTTGTACTAGCTCTAG 58.267 37.037 0.00 2.55 39.04 2.43
1957 11316 9.730705 TGTCTTAACTTTGTACTAGCTCTAGTA 57.269 33.333 11.59 11.59 43.98 1.82
1995 11354 7.178712 AGTTTGAGACACTTATTTTGAGACG 57.821 36.000 0.00 0.00 0.00 4.18
1996 11355 6.202954 AGTTTGAGACACTTATTTTGAGACGG 59.797 38.462 0.00 0.00 0.00 4.79
1997 11356 5.462530 TGAGACACTTATTTTGAGACGGA 57.537 39.130 0.00 0.00 0.00 4.69
1998 11357 5.470368 TGAGACACTTATTTTGAGACGGAG 58.530 41.667 0.00 0.00 0.00 4.63
1999 11358 4.822026 AGACACTTATTTTGAGACGGAGG 58.178 43.478 0.00 0.00 0.00 4.30
2000 11359 3.933332 GACACTTATTTTGAGACGGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
2001 11360 3.581332 ACACTTATTTTGAGACGGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
2002 11361 4.184629 CACTTATTTTGAGACGGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
2003 11362 3.838903 ACTTATTTTGAGACGGAGGGAGT 59.161 43.478 0.00 0.00 0.00 3.85
2004 11363 5.021458 ACTTATTTTGAGACGGAGGGAGTA 58.979 41.667 0.00 0.00 0.00 2.59
2005 11364 5.661759 ACTTATTTTGAGACGGAGGGAGTAT 59.338 40.000 0.00 0.00 0.00 2.12
2006 11365 3.887621 TTTTGAGACGGAGGGAGTATG 57.112 47.619 0.00 0.00 0.00 2.39
2020 11379 3.117512 GGGAGTATGTGGTTTCCCATCAT 60.118 47.826 3.58 0.00 46.96 2.45
2103 11462 2.352814 CGTGTGAACTCCCTTCTGGTAG 60.353 54.545 0.00 0.00 34.77 3.18
2109 11468 2.606378 ACTCCCTTCTGGTAGTTTCGT 58.394 47.619 0.00 0.00 34.77 3.85
2127 11486 2.433664 CCACGTTCGCCACCCTAC 60.434 66.667 0.00 0.00 0.00 3.18
2147 11506 0.834687 TGAGGGTACTGGCGGTTTCT 60.835 55.000 3.31 0.00 0.00 2.52
2151 11510 1.012486 GGTACTGGCGGTTTCTCGTG 61.012 60.000 3.31 0.00 0.00 4.35
2184 11550 6.015180 CCACCTGATTGGAGAATCTTCAAAAA 60.015 38.462 8.21 0.00 39.24 1.94
2525 11894 8.551205 TCGACATTCAAATGAATAGTAGAATGC 58.449 33.333 9.62 5.53 43.57 3.56
2527 11896 8.757982 ACATTCAAATGAATAGTAGAATGCCT 57.242 30.769 9.62 0.00 43.57 4.75
2543 11916 9.530633 GTAGAATGCCTTAGATTAATATACCCG 57.469 37.037 0.00 0.00 0.00 5.28
2561 11934 3.090037 CCCGTGAAAAGTAGGAGAGAGA 58.910 50.000 0.00 0.00 0.00 3.10
2562 11935 3.510360 CCCGTGAAAAGTAGGAGAGAGAA 59.490 47.826 0.00 0.00 0.00 2.87
2563 11936 4.381079 CCCGTGAAAAGTAGGAGAGAGAAG 60.381 50.000 0.00 0.00 0.00 2.85
2564 11937 4.459685 CCGTGAAAAGTAGGAGAGAGAAGA 59.540 45.833 0.00 0.00 0.00 2.87
2565 11938 5.392595 CCGTGAAAAGTAGGAGAGAGAAGAG 60.393 48.000 0.00 0.00 0.00 2.85
2566 11939 5.413213 CGTGAAAAGTAGGAGAGAGAAGAGA 59.587 44.000 0.00 0.00 0.00 3.10
2567 11940 6.072397 CGTGAAAAGTAGGAGAGAGAAGAGAA 60.072 42.308 0.00 0.00 0.00 2.87
2568 11941 7.522399 CGTGAAAAGTAGGAGAGAGAAGAGAAA 60.522 40.741 0.00 0.00 0.00 2.52
2569 11942 8.311109 GTGAAAAGTAGGAGAGAGAAGAGAAAT 58.689 37.037 0.00 0.00 0.00 2.17
2570 11943 9.535170 TGAAAAGTAGGAGAGAGAAGAGAAATA 57.465 33.333 0.00 0.00 0.00 1.40
2648 12043 9.116067 TGCATTATAGGAAAATGGTAGTGTAAC 57.884 33.333 0.00 0.00 35.34 2.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
80 81 0.031616 GTCACCTCCTCCTCCCAGAT 60.032 60.000 0.00 0.00 0.00 2.90
83 84 2.037367 CGTCACCTCCTCCTCCCA 59.963 66.667 0.00 0.00 0.00 4.37
107 111 0.882042 CTAGCTGAAATGGCGGCGAT 60.882 55.000 12.98 0.00 44.79 4.58
132 136 1.734477 CTGACGTTGACAGGCTCGG 60.734 63.158 0.00 0.00 0.00 4.63
139 149 2.729491 CGCTCGCTGACGTTGACA 60.729 61.111 0.00 0.00 41.18 3.58
187 197 4.155733 TTCCCGATCATGGCGCGT 62.156 61.111 8.43 0.00 0.00 6.01
203 213 1.528309 CCCGCCTGTTGAACCTGTT 60.528 57.895 0.00 0.00 0.00 3.16
213 223 3.003763 GGAACTCCTCCCGCCTGT 61.004 66.667 0.00 0.00 38.44 4.00
223 233 1.599576 GAGCACCTCCAGGAACTCC 59.400 63.158 0.00 0.00 34.60 3.85
244 254 4.385310 GCAACTATGATCTTAACCCCCTGT 60.385 45.833 0.00 0.00 0.00 4.00
253 263 5.527214 CGGAAACATGGCAACTATGATCTTA 59.473 40.000 0.00 0.00 37.61 2.10
255 265 3.879295 CGGAAACATGGCAACTATGATCT 59.121 43.478 0.00 0.00 37.61 2.75
256 266 3.003689 CCGGAAACATGGCAACTATGATC 59.996 47.826 0.00 0.00 37.61 2.92
257 267 2.951642 CCGGAAACATGGCAACTATGAT 59.048 45.455 0.00 0.00 37.61 2.45
258 268 2.290641 ACCGGAAACATGGCAACTATGA 60.291 45.455 9.46 0.00 37.61 2.15
259 269 2.091541 ACCGGAAACATGGCAACTATG 58.908 47.619 9.46 0.00 37.61 2.23
260 270 2.507407 ACCGGAAACATGGCAACTAT 57.493 45.000 9.46 0.00 37.61 2.12
261 271 2.702261 GTACCGGAAACATGGCAACTA 58.298 47.619 9.46 0.00 37.61 2.24
262 272 1.530323 GTACCGGAAACATGGCAACT 58.470 50.000 9.46 0.00 37.61 3.16
263 273 0.167251 CGTACCGGAAACATGGCAAC 59.833 55.000 9.46 0.00 0.00 4.17
264 274 2.545875 CGTACCGGAAACATGGCAA 58.454 52.632 9.46 0.00 0.00 4.52
265 275 4.287580 CGTACCGGAAACATGGCA 57.712 55.556 9.46 0.00 0.00 4.92
276 286 2.125673 CTTGCTCCCACCGTACCG 60.126 66.667 0.00 0.00 0.00 4.02
277 287 1.833787 TTCCTTGCTCCCACCGTACC 61.834 60.000 0.00 0.00 0.00 3.34
278 288 0.672711 GTTCCTTGCTCCCACCGTAC 60.673 60.000 0.00 0.00 0.00 3.67
279 289 1.675219 GTTCCTTGCTCCCACCGTA 59.325 57.895 0.00 0.00 0.00 4.02
280 290 2.430367 GTTCCTTGCTCCCACCGT 59.570 61.111 0.00 0.00 0.00 4.83
281 291 2.742372 CGTTCCTTGCTCCCACCG 60.742 66.667 0.00 0.00 0.00 4.94
282 292 2.359975 CCGTTCCTTGCTCCCACC 60.360 66.667 0.00 0.00 0.00 4.61
283 293 2.359975 CCCGTTCCTTGCTCCCAC 60.360 66.667 0.00 0.00 0.00 4.61
284 294 2.150719 TTCCCGTTCCTTGCTCCCA 61.151 57.895 0.00 0.00 0.00 4.37
285 295 1.674651 GTTCCCGTTCCTTGCTCCC 60.675 63.158 0.00 0.00 0.00 4.30
286 296 2.033194 CGTTCCCGTTCCTTGCTCC 61.033 63.158 0.00 0.00 0.00 4.70
287 297 1.005394 TCGTTCCCGTTCCTTGCTC 60.005 57.895 0.00 0.00 35.01 4.26
288 298 1.004918 CTCGTTCCCGTTCCTTGCT 60.005 57.895 0.00 0.00 35.01 3.91
289 299 2.033194 CCTCGTTCCCGTTCCTTGC 61.033 63.158 0.00 0.00 35.01 4.01
290 300 1.375523 CCCTCGTTCCCGTTCCTTG 60.376 63.158 0.00 0.00 35.01 3.61
291 301 1.534717 TCCCTCGTTCCCGTTCCTT 60.535 57.895 0.00 0.00 35.01 3.36
292 302 2.118951 TCCCTCGTTCCCGTTCCT 59.881 61.111 0.00 0.00 35.01 3.36
293 303 2.263852 GTCCCTCGTTCCCGTTCC 59.736 66.667 0.00 0.00 35.01 3.62
294 304 2.126189 CGTCCCTCGTTCCCGTTC 60.126 66.667 0.00 0.00 35.01 3.95
295 305 2.598394 TCGTCCCTCGTTCCCGTT 60.598 61.111 0.00 0.00 40.80 4.44
296 306 3.060615 CTCGTCCCTCGTTCCCGT 61.061 66.667 0.00 0.00 40.80 5.28
297 307 2.749044 TCTCGTCCCTCGTTCCCG 60.749 66.667 0.00 0.00 40.80 5.14
298 308 1.655885 GACTCTCGTCCCTCGTTCCC 61.656 65.000 0.00 0.00 40.80 3.97
299 309 1.801983 GACTCTCGTCCCTCGTTCC 59.198 63.158 0.00 0.00 40.80 3.62
300 310 1.424635 CGACTCTCGTCCCTCGTTC 59.575 63.158 0.00 0.00 40.80 3.95
301 311 2.039405 CCGACTCTCGTCCCTCGTT 61.039 63.158 0.00 0.00 38.40 3.85
302 312 2.436292 CCGACTCTCGTCCCTCGT 60.436 66.667 0.00 0.00 38.40 4.18
303 313 2.436292 ACCGACTCTCGTCCCTCG 60.436 66.667 0.00 0.00 38.40 4.63
304 314 2.408241 CCACCGACTCTCGTCCCTC 61.408 68.421 0.00 0.00 38.40 4.30
305 315 2.361357 CCACCGACTCTCGTCCCT 60.361 66.667 0.00 0.00 38.40 4.20
306 316 4.131088 GCCACCGACTCTCGTCCC 62.131 72.222 0.00 0.00 38.40 4.46
307 317 3.063084 AGCCACCGACTCTCGTCC 61.063 66.667 0.00 0.00 38.40 4.79
308 318 1.863662 TTCAGCCACCGACTCTCGTC 61.864 60.000 0.00 0.00 38.40 4.20
309 319 1.461091 TTTCAGCCACCGACTCTCGT 61.461 55.000 0.00 0.00 38.40 4.18
310 320 0.319555 TTTTCAGCCACCGACTCTCG 60.320 55.000 0.00 0.00 40.07 4.04
311 321 1.878953 TTTTTCAGCCACCGACTCTC 58.121 50.000 0.00 0.00 0.00 3.20
328 338 4.645863 ACCCTCGTTGTACCCTATTTTT 57.354 40.909 0.00 0.00 0.00 1.94
329 339 5.963214 ATACCCTCGTTGTACCCTATTTT 57.037 39.130 0.00 0.00 0.00 1.82
330 340 5.898972 TGTATACCCTCGTTGTACCCTATTT 59.101 40.000 0.00 0.00 0.00 1.40
331 341 5.457686 TGTATACCCTCGTTGTACCCTATT 58.542 41.667 0.00 0.00 0.00 1.73
332 342 5.065613 TGTATACCCTCGTTGTACCCTAT 57.934 43.478 0.00 0.00 0.00 2.57
333 343 4.518278 TGTATACCCTCGTTGTACCCTA 57.482 45.455 0.00 0.00 0.00 3.53
334 344 3.386932 TGTATACCCTCGTTGTACCCT 57.613 47.619 0.00 0.00 0.00 4.34
335 345 3.893813 AGATGTATACCCTCGTTGTACCC 59.106 47.826 0.00 0.00 0.00 3.69
336 346 4.826183 AGAGATGTATACCCTCGTTGTACC 59.174 45.833 13.43 0.00 32.52 3.34
337 347 6.388435 AAGAGATGTATACCCTCGTTGTAC 57.612 41.667 13.43 0.00 32.52 2.90
338 348 7.443575 GTCTAAGAGATGTATACCCTCGTTGTA 59.556 40.741 13.08 6.87 32.52 2.41
339 349 6.262720 GTCTAAGAGATGTATACCCTCGTTGT 59.737 42.308 13.08 6.32 32.52 3.32
340 350 6.566187 CGTCTAAGAGATGTATACCCTCGTTG 60.566 46.154 13.08 11.77 32.52 4.10
341 351 5.469421 CGTCTAAGAGATGTATACCCTCGTT 59.531 44.000 13.08 11.11 32.52 3.85
342 352 4.996122 CGTCTAAGAGATGTATACCCTCGT 59.004 45.833 13.43 13.04 32.52 4.18
343 353 5.236282 TCGTCTAAGAGATGTATACCCTCG 58.764 45.833 13.43 5.29 33.10 4.63
344 354 7.690952 ATTCGTCTAAGAGATGTATACCCTC 57.309 40.000 12.10 12.10 33.10 4.30
345 355 8.480133 AAATTCGTCTAAGAGATGTATACCCT 57.520 34.615 0.00 0.00 33.10 4.34
346 356 9.543783 AAAAATTCGTCTAAGAGATGTATACCC 57.456 33.333 0.00 0.00 33.10 3.69
369 379 3.460103 GATCGCGTCCCCACTATAAAAA 58.540 45.455 5.77 0.00 0.00 1.94
370 380 2.224113 GGATCGCGTCCCCACTATAAAA 60.224 50.000 5.77 0.00 41.50 1.52
371 381 1.342174 GGATCGCGTCCCCACTATAAA 59.658 52.381 5.77 0.00 41.50 1.40
372 382 0.963962 GGATCGCGTCCCCACTATAA 59.036 55.000 5.77 0.00 41.50 0.98
373 383 2.649831 GGATCGCGTCCCCACTATA 58.350 57.895 5.77 0.00 41.50 1.31
374 384 3.456317 GGATCGCGTCCCCACTAT 58.544 61.111 5.77 0.00 41.50 2.12
382 392 2.389713 CAAATGGATTGGATCGCGTC 57.610 50.000 5.77 2.75 35.27 5.19
391 401 4.202010 GGTTCATCGTACCCAAATGGATTG 60.202 45.833 0.00 0.00 38.84 2.67
392 402 3.951680 GGTTCATCGTACCCAAATGGATT 59.048 43.478 0.00 0.00 37.39 3.01
393 403 3.551846 GGTTCATCGTACCCAAATGGAT 58.448 45.455 0.00 0.00 37.39 3.41
394 404 2.993937 GGTTCATCGTACCCAAATGGA 58.006 47.619 0.00 0.00 37.39 3.41
402 412 0.248621 CGTACCGGGTTCATCGTACC 60.249 60.000 4.31 0.00 34.82 3.34
403 413 0.248621 CCGTACCGGGTTCATCGTAC 60.249 60.000 4.31 0.00 44.15 3.67
404 414 2.105984 CCGTACCGGGTTCATCGTA 58.894 57.895 4.31 0.00 44.15 3.43
405 415 2.887360 CCGTACCGGGTTCATCGT 59.113 61.111 4.31 0.00 44.15 3.73
415 425 0.039798 CGACCCATGATACCGTACCG 60.040 60.000 0.00 0.00 0.00 4.02
416 426 1.268899 CTCGACCCATGATACCGTACC 59.731 57.143 0.00 0.00 0.00 3.34
417 427 1.268899 CCTCGACCCATGATACCGTAC 59.731 57.143 0.00 0.00 0.00 3.67
418 428 1.143481 TCCTCGACCCATGATACCGTA 59.857 52.381 0.00 0.00 0.00 4.02
419 429 0.106369 TCCTCGACCCATGATACCGT 60.106 55.000 0.00 0.00 0.00 4.83
420 430 1.037493 TTCCTCGACCCATGATACCG 58.963 55.000 0.00 0.00 0.00 4.02
421 431 1.269621 CGTTCCTCGACCCATGATACC 60.270 57.143 0.00 0.00 42.86 2.73
422 432 1.868519 GCGTTCCTCGACCCATGATAC 60.869 57.143 0.00 0.00 42.86 2.24
423 433 0.387929 GCGTTCCTCGACCCATGATA 59.612 55.000 0.00 0.00 42.86 2.15
424 434 1.144057 GCGTTCCTCGACCCATGAT 59.856 57.895 0.00 0.00 42.86 2.45
425 435 2.225791 CTGCGTTCCTCGACCCATGA 62.226 60.000 0.00 0.00 42.86 3.07
426 436 1.811266 CTGCGTTCCTCGACCCATG 60.811 63.158 0.00 0.00 42.86 3.66
427 437 1.827399 AACTGCGTTCCTCGACCCAT 61.827 55.000 0.00 0.00 42.86 4.00
428 438 2.430382 GAACTGCGTTCCTCGACCCA 62.430 60.000 9.40 0.00 42.86 4.51
429 439 1.737008 GAACTGCGTTCCTCGACCC 60.737 63.158 9.40 0.00 42.86 4.46
430 440 0.319641 AAGAACTGCGTTCCTCGACC 60.320 55.000 14.85 0.00 42.85 4.79
431 441 0.784778 CAAGAACTGCGTTCCTCGAC 59.215 55.000 14.85 0.00 42.85 4.20
432 442 0.671796 TCAAGAACTGCGTTCCTCGA 59.328 50.000 14.85 8.50 42.85 4.04
433 443 1.457303 CTTCAAGAACTGCGTTCCTCG 59.543 52.381 14.85 6.82 42.85 4.63
434 444 2.755650 TCTTCAAGAACTGCGTTCCTC 58.244 47.619 14.85 0.00 42.85 3.71
435 445 2.910688 TCTTCAAGAACTGCGTTCCT 57.089 45.000 14.85 3.11 42.85 3.36
445 455 2.288030 GGGAGTCGTCGTTCTTCAAGAA 60.288 50.000 0.00 0.00 0.00 2.52
446 456 1.268899 GGGAGTCGTCGTTCTTCAAGA 59.731 52.381 0.00 0.00 0.00 3.02
447 457 1.269998 AGGGAGTCGTCGTTCTTCAAG 59.730 52.381 0.00 0.00 0.00 3.02
448 458 1.000607 CAGGGAGTCGTCGTTCTTCAA 60.001 52.381 0.00 0.00 0.00 2.69
449 459 0.596577 CAGGGAGTCGTCGTTCTTCA 59.403 55.000 0.00 0.00 0.00 3.02
450 460 0.879765 TCAGGGAGTCGTCGTTCTTC 59.120 55.000 0.00 0.00 0.00 2.87
451 461 0.597072 GTCAGGGAGTCGTCGTTCTT 59.403 55.000 0.00 0.00 0.00 2.52
452 462 1.575576 CGTCAGGGAGTCGTCGTTCT 61.576 60.000 0.00 0.00 0.00 3.01
453 463 1.154263 CGTCAGGGAGTCGTCGTTC 60.154 63.158 0.00 0.00 0.00 3.95
454 464 2.623915 CCGTCAGGGAGTCGTCGTT 61.624 63.158 0.00 0.00 38.47 3.85
455 465 3.054503 CCGTCAGGGAGTCGTCGT 61.055 66.667 0.00 0.00 38.47 4.34
456 466 3.036783 GACCGTCAGGGAGTCGTCG 62.037 68.421 0.00 0.00 43.47 5.12
457 467 1.924320 CTGACCGTCAGGGAGTCGTC 61.924 65.000 19.29 0.00 40.71 4.20
458 468 1.972223 CTGACCGTCAGGGAGTCGT 60.972 63.158 19.29 0.00 40.71 4.34
459 469 2.878429 CTGACCGTCAGGGAGTCG 59.122 66.667 19.29 0.00 40.71 4.18
460 470 1.608717 ATGCTGACCGTCAGGGAGTC 61.609 60.000 26.24 12.16 44.43 3.36
461 471 1.194781 AATGCTGACCGTCAGGGAGT 61.195 55.000 26.24 8.28 44.43 3.85
462 472 0.460987 GAATGCTGACCGTCAGGGAG 60.461 60.000 26.24 5.97 44.43 4.30
463 473 1.596934 GAATGCTGACCGTCAGGGA 59.403 57.895 26.24 11.52 44.43 4.20
464 474 1.450312 GGAATGCTGACCGTCAGGG 60.450 63.158 26.24 7.00 44.43 4.45
465 475 0.036010 AAGGAATGCTGACCGTCAGG 60.036 55.000 26.24 11.10 44.43 3.86
466 476 1.081892 CAAGGAATGCTGACCGTCAG 58.918 55.000 22.14 22.14 46.90 3.51
467 477 0.396435 ACAAGGAATGCTGACCGTCA 59.604 50.000 0.29 0.29 0.00 4.35
468 478 1.197721 CAACAAGGAATGCTGACCGTC 59.802 52.381 0.00 0.00 0.00 4.79
469 479 1.238439 CAACAAGGAATGCTGACCGT 58.762 50.000 0.00 0.00 0.00 4.83
470 480 1.238439 ACAACAAGGAATGCTGACCG 58.762 50.000 0.00 0.00 0.00 4.79
471 481 4.846779 TTAACAACAAGGAATGCTGACC 57.153 40.909 0.00 0.00 0.00 4.02
472 482 5.048083 TCCATTAACAACAAGGAATGCTGAC 60.048 40.000 0.00 0.00 0.00 3.51
473 483 5.076182 TCCATTAACAACAAGGAATGCTGA 58.924 37.500 0.00 0.00 0.00 4.26
474 484 5.389859 TCCATTAACAACAAGGAATGCTG 57.610 39.130 0.00 0.00 0.00 4.41
475 485 5.127682 GGATCCATTAACAACAAGGAATGCT 59.872 40.000 6.95 0.00 31.17 3.79
476 486 5.351458 GGATCCATTAACAACAAGGAATGC 58.649 41.667 6.95 0.00 31.17 3.56
477 487 5.658190 AGGGATCCATTAACAACAAGGAATG 59.342 40.000 15.23 0.00 31.17 2.67
478 488 5.842339 AGGGATCCATTAACAACAAGGAAT 58.158 37.500 15.23 0.00 31.17 3.01
479 489 5.269554 AGGGATCCATTAACAACAAGGAA 57.730 39.130 15.23 0.00 31.17 3.36
480 490 4.946160 AGGGATCCATTAACAACAAGGA 57.054 40.909 15.23 0.00 0.00 3.36
481 491 4.381932 GCAAGGGATCCATTAACAACAAGG 60.382 45.833 12.07 0.00 0.00 3.61
482 492 4.220382 TGCAAGGGATCCATTAACAACAAG 59.780 41.667 12.07 0.00 0.00 3.16
483 493 4.155709 TGCAAGGGATCCATTAACAACAA 58.844 39.130 12.07 0.00 0.00 2.83
484 494 3.772387 TGCAAGGGATCCATTAACAACA 58.228 40.909 12.07 2.88 0.00 3.33
485 495 4.799564 TTGCAAGGGATCCATTAACAAC 57.200 40.909 12.07 0.23 0.00 3.32
486 496 7.487822 TTAATTGCAAGGGATCCATTAACAA 57.512 32.000 21.87 21.87 0.00 2.83
487 497 7.418827 CCATTAATTGCAAGGGATCCATTAACA 60.419 37.037 12.07 10.46 30.83 2.41
488 498 6.930722 CCATTAATTGCAAGGGATCCATTAAC 59.069 38.462 12.07 7.82 30.83 2.01
489 499 6.843333 TCCATTAATTGCAAGGGATCCATTAA 59.157 34.615 12.07 12.37 33.61 1.40
490 500 6.267471 GTCCATTAATTGCAAGGGATCCATTA 59.733 38.462 12.07 3.65 40.25 1.90
491 501 5.070847 GTCCATTAATTGCAAGGGATCCATT 59.929 40.000 15.23 10.59 40.25 3.16
492 502 4.590222 GTCCATTAATTGCAAGGGATCCAT 59.410 41.667 15.23 2.55 40.25 3.41
493 503 3.960102 GTCCATTAATTGCAAGGGATCCA 59.040 43.478 15.23 0.00 40.25 3.41
494 504 4.218312 AGTCCATTAATTGCAAGGGATCC 58.782 43.478 4.94 1.92 40.25 3.36
495 505 5.360714 TCAAGTCCATTAATTGCAAGGGATC 59.639 40.000 4.94 2.80 40.25 3.36
496 506 5.271598 TCAAGTCCATTAATTGCAAGGGAT 58.728 37.500 4.94 0.00 40.25 3.85
497 507 4.671831 TCAAGTCCATTAATTGCAAGGGA 58.328 39.130 4.94 3.97 36.08 4.20
498 508 4.706476 TCTCAAGTCCATTAATTGCAAGGG 59.294 41.667 4.94 1.48 0.00 3.95
499 509 5.902613 TCTCAAGTCCATTAATTGCAAGG 57.097 39.130 4.94 0.00 0.00 3.61
500 510 7.596494 TCTTTCTCAAGTCCATTAATTGCAAG 58.404 34.615 4.94 0.00 0.00 4.01
501 511 7.523293 TCTTTCTCAAGTCCATTAATTGCAA 57.477 32.000 0.00 0.00 0.00 4.08
502 512 7.523293 TTCTTTCTCAAGTCCATTAATTGCA 57.477 32.000 0.00 0.00 0.00 4.08
503 513 8.246180 TCATTCTTTCTCAAGTCCATTAATTGC 58.754 33.333 0.00 0.00 0.00 3.56
504 514 9.784680 CTCATTCTTTCTCAAGTCCATTAATTG 57.215 33.333 0.00 0.00 0.00 2.32
505 515 8.964772 CCTCATTCTTTCTCAAGTCCATTAATT 58.035 33.333 0.00 0.00 0.00 1.40
506 516 8.331740 TCCTCATTCTTTCTCAAGTCCATTAAT 58.668 33.333 0.00 0.00 0.00 1.40
507 517 7.689299 TCCTCATTCTTTCTCAAGTCCATTAA 58.311 34.615 0.00 0.00 0.00 1.40
508 518 7.038017 ACTCCTCATTCTTTCTCAAGTCCATTA 60.038 37.037 0.00 0.00 0.00 1.90
509 519 6.131972 TCCTCATTCTTTCTCAAGTCCATT 57.868 37.500 0.00 0.00 0.00 3.16
510 520 5.250313 ACTCCTCATTCTTTCTCAAGTCCAT 59.750 40.000 0.00 0.00 0.00 3.41
511 521 4.594920 ACTCCTCATTCTTTCTCAAGTCCA 59.405 41.667 0.00 0.00 0.00 4.02
512 522 5.159273 ACTCCTCATTCTTTCTCAAGTCC 57.841 43.478 0.00 0.00 0.00 3.85
513 523 6.463360 AGAACTCCTCATTCTTTCTCAAGTC 58.537 40.000 0.00 0.00 32.32 3.01
514 524 6.432403 AGAACTCCTCATTCTTTCTCAAGT 57.568 37.500 0.00 0.00 32.32 3.16
515 525 6.933521 TCAAGAACTCCTCATTCTTTCTCAAG 59.066 38.462 0.00 0.00 42.46 3.02
516 526 6.830912 TCAAGAACTCCTCATTCTTTCTCAA 58.169 36.000 0.00 0.00 42.46 3.02
517 527 6.268617 TCTCAAGAACTCCTCATTCTTTCTCA 59.731 38.462 0.00 0.00 42.46 3.27
518 528 6.696411 TCTCAAGAACTCCTCATTCTTTCTC 58.304 40.000 0.00 0.00 42.46 2.87
519 529 6.678568 TCTCAAGAACTCCTCATTCTTTCT 57.321 37.500 0.00 0.00 42.46 2.52
520 530 7.736447 TTTCTCAAGAACTCCTCATTCTTTC 57.264 36.000 0.00 0.00 42.46 2.62
521 531 7.995488 TCTTTTCTCAAGAACTCCTCATTCTTT 59.005 33.333 0.00 0.00 42.46 2.52
522 532 7.512992 TCTTTTCTCAAGAACTCCTCATTCTT 58.487 34.615 0.00 0.00 45.24 2.52
523 533 7.072263 TCTTTTCTCAAGAACTCCTCATTCT 57.928 36.000 0.00 0.00 38.05 2.40
524 534 7.736447 TTCTTTTCTCAAGAACTCCTCATTC 57.264 36.000 0.00 0.00 33.13 2.67
525 535 7.254932 CGTTTCTTTTCTCAAGAACTCCTCATT 60.255 37.037 0.00 0.00 36.14 2.57
526 536 6.203723 CGTTTCTTTTCTCAAGAACTCCTCAT 59.796 38.462 0.00 0.00 36.14 2.90
527 537 5.523916 CGTTTCTTTTCTCAAGAACTCCTCA 59.476 40.000 0.00 0.00 36.14 3.86
528 538 5.753921 TCGTTTCTTTTCTCAAGAACTCCTC 59.246 40.000 0.00 0.00 36.14 3.71
529 539 5.524281 GTCGTTTCTTTTCTCAAGAACTCCT 59.476 40.000 0.00 0.00 36.14 3.69
530 540 5.293569 TGTCGTTTCTTTTCTCAAGAACTCC 59.706 40.000 0.00 0.00 36.14 3.85
531 541 6.345920 TGTCGTTTCTTTTCTCAAGAACTC 57.654 37.500 0.00 0.00 36.14 3.01
532 542 6.292381 CGATGTCGTTTCTTTTCTCAAGAACT 60.292 38.462 0.00 0.00 36.14 3.01
533 543 5.841296 CGATGTCGTTTCTTTTCTCAAGAAC 59.159 40.000 0.00 0.00 36.14 3.01
534 544 5.974300 CGATGTCGTTTCTTTTCTCAAGAA 58.026 37.500 0.00 0.00 34.73 2.52
535 545 5.576337 CGATGTCGTTTCTTTTCTCAAGA 57.424 39.130 0.00 0.00 34.11 3.02
550 560 4.745125 AGGCATAATTTACTCACGATGTCG 59.255 41.667 0.11 0.11 46.33 4.35
551 561 5.753438 TGAGGCATAATTTACTCACGATGTC 59.247 40.000 0.00 0.00 35.24 3.06
552 562 5.523916 GTGAGGCATAATTTACTCACGATGT 59.476 40.000 7.76 0.00 46.84 3.06
553 563 5.978878 GTGAGGCATAATTTACTCACGATG 58.021 41.667 7.76 0.00 46.84 3.84
558 568 6.348950 CCAAAACGTGAGGCATAATTTACTCA 60.349 38.462 0.00 0.00 37.61 3.41
559 569 6.027749 CCAAAACGTGAGGCATAATTTACTC 58.972 40.000 0.00 0.00 0.00 2.59
560 570 5.949735 CCAAAACGTGAGGCATAATTTACT 58.050 37.500 0.00 0.00 0.00 2.24
571 581 0.030638 CCAACAGCCAAAACGTGAGG 59.969 55.000 0.00 0.00 0.00 3.86
572 582 1.021202 TCCAACAGCCAAAACGTGAG 58.979 50.000 0.00 0.00 0.00 3.51
573 583 1.606668 GATCCAACAGCCAAAACGTGA 59.393 47.619 0.00 0.00 0.00 4.35
574 584 1.335872 GGATCCAACAGCCAAAACGTG 60.336 52.381 6.95 0.00 0.00 4.49
575 585 0.958822 GGATCCAACAGCCAAAACGT 59.041 50.000 6.95 0.00 0.00 3.99
576 586 1.068333 CAGGATCCAACAGCCAAAACG 60.068 52.381 15.82 0.00 30.00 3.60
577 587 2.238521 TCAGGATCCAACAGCCAAAAC 58.761 47.619 15.82 0.00 30.00 2.43
578 588 2.673775 TCAGGATCCAACAGCCAAAA 57.326 45.000 15.82 0.00 30.00 2.44
579 589 2.673775 TTCAGGATCCAACAGCCAAA 57.326 45.000 15.82 0.00 30.00 3.28
580 590 2.673775 TTTCAGGATCCAACAGCCAA 57.326 45.000 15.82 0.00 30.00 4.52
581 591 2.309755 AGATTTCAGGATCCAACAGCCA 59.690 45.455 15.82 0.00 30.00 4.75
582 592 2.686915 CAGATTTCAGGATCCAACAGCC 59.313 50.000 15.82 0.00 0.00 4.85
583 593 3.614092 TCAGATTTCAGGATCCAACAGC 58.386 45.455 15.82 0.00 0.00 4.40
584 594 5.007430 CGATTCAGATTTCAGGATCCAACAG 59.993 44.000 15.82 0.57 0.00 3.16
585 595 4.877823 CGATTCAGATTTCAGGATCCAACA 59.122 41.667 15.82 0.00 0.00 3.33
586 596 5.118990 TCGATTCAGATTTCAGGATCCAAC 58.881 41.667 15.82 0.00 0.00 3.77
587 597 5.357742 TCGATTCAGATTTCAGGATCCAA 57.642 39.130 15.82 0.00 0.00 3.53
588 598 4.202295 CCTCGATTCAGATTTCAGGATCCA 60.202 45.833 15.82 0.00 0.00 3.41
589 599 4.039730 TCCTCGATTCAGATTTCAGGATCC 59.960 45.833 2.48 2.48 0.00 3.36
590 600 5.207110 TCCTCGATTCAGATTTCAGGATC 57.793 43.478 0.00 0.00 0.00 3.36
591 601 4.502950 GCTCCTCGATTCAGATTTCAGGAT 60.503 45.833 0.00 0.00 0.00 3.24
592 602 3.181471 GCTCCTCGATTCAGATTTCAGGA 60.181 47.826 0.00 0.00 0.00 3.86
593 603 3.129871 GCTCCTCGATTCAGATTTCAGG 58.870 50.000 0.00 0.00 0.00 3.86
594 604 3.790091 TGCTCCTCGATTCAGATTTCAG 58.210 45.455 0.00 0.00 0.00 3.02
595 605 3.431346 CCTGCTCCTCGATTCAGATTTCA 60.431 47.826 0.00 0.00 0.00 2.69
596 606 3.129871 CCTGCTCCTCGATTCAGATTTC 58.870 50.000 0.00 0.00 0.00 2.17
597 607 2.744494 GCCTGCTCCTCGATTCAGATTT 60.744 50.000 0.00 0.00 0.00 2.17
598 608 1.202627 GCCTGCTCCTCGATTCAGATT 60.203 52.381 0.00 0.00 0.00 2.40
599 609 0.392336 GCCTGCTCCTCGATTCAGAT 59.608 55.000 0.00 0.00 0.00 2.90
600 610 0.685785 AGCCTGCTCCTCGATTCAGA 60.686 55.000 0.00 0.00 0.00 3.27
601 611 0.530211 CAGCCTGCTCCTCGATTCAG 60.530 60.000 0.00 0.00 0.00 3.02
602 612 1.519246 CAGCCTGCTCCTCGATTCA 59.481 57.895 0.00 0.00 0.00 2.57
603 613 1.886777 GCAGCCTGCTCCTCGATTC 60.887 63.158 10.04 0.00 40.96 2.52
604 614 2.188994 GCAGCCTGCTCCTCGATT 59.811 61.111 10.04 0.00 40.96 3.34
605 615 4.218578 CGCAGCCTGCTCCTCGAT 62.219 66.667 15.80 0.00 42.25 3.59
622 632 0.880718 GATGAAGATTCGGCGTCCCC 60.881 60.000 6.85 0.00 0.00 4.81
623 633 1.215655 CGATGAAGATTCGGCGTCCC 61.216 60.000 6.85 0.00 33.05 4.46
624 634 0.248907 TCGATGAAGATTCGGCGTCC 60.249 55.000 6.85 0.00 37.22 4.79
625 635 1.556564 TTCGATGAAGATTCGGCGTC 58.443 50.000 6.85 0.00 37.22 5.19
626 636 2.128035 GATTCGATGAAGATTCGGCGT 58.872 47.619 6.85 0.00 37.22 5.68
627 637 1.123217 CGATTCGATGAAGATTCGGCG 59.877 52.381 0.00 0.00 39.14 6.46
628 638 2.128035 ACGATTCGATGAAGATTCGGC 58.872 47.619 13.95 0.00 43.84 5.54
629 639 3.669122 GGTACGATTCGATGAAGATTCGG 59.331 47.826 13.95 0.43 43.84 4.30
630 640 4.870315 GGTACGATTCGATGAAGATTCG 57.130 45.455 13.95 8.94 44.58 3.34
643 653 4.198919 CGAGGTCGGATTCGGTACGATT 62.199 54.545 0.00 0.00 46.68 3.34
644 654 2.735025 CGAGGTCGGATTCGGTACGAT 61.735 57.143 0.00 0.00 46.68 3.73
646 656 1.010350 CGAGGTCGGATTCGGTACG 60.010 63.158 0.00 0.00 45.33 3.67
647 657 0.453390 AACGAGGTCGGATTCGGTAC 59.547 55.000 15.86 0.00 44.95 3.34
648 658 0.734889 GAACGAGGTCGGATTCGGTA 59.265 55.000 15.86 0.00 44.95 4.02
649 659 1.509923 GAACGAGGTCGGATTCGGT 59.490 57.895 15.86 11.18 44.95 4.69
650 660 1.226888 GGAACGAGGTCGGATTCGG 60.227 63.158 15.86 2.91 44.95 4.30
651 661 1.226888 GGGAACGAGGTCGGATTCG 60.227 63.158 4.13 11.65 44.95 3.34
652 662 4.829588 GGGAACGAGGTCGGATTC 57.170 61.111 4.13 0.00 44.95 2.52
664 674 2.601562 CGGAATCGGATTCGGGAAC 58.398 57.895 23.25 10.70 40.17 3.62
675 685 1.419374 GATTCATCGACCCGGAATCG 58.581 55.000 18.79 18.79 38.02 3.34
687 697 1.067495 GTCCCTCGATCCCGATTCATC 60.067 57.143 0.00 0.00 44.62 2.92
688 698 0.969894 GTCCCTCGATCCCGATTCAT 59.030 55.000 0.00 0.00 44.62 2.57
689 699 1.452953 CGTCCCTCGATCCCGATTCA 61.453 60.000 0.00 0.00 44.62 2.57
690 700 1.286260 CGTCCCTCGATCCCGATTC 59.714 63.158 0.00 0.00 44.62 2.52
691 701 2.201022 CCGTCCCTCGATCCCGATT 61.201 63.158 0.00 0.00 44.62 3.34
692 702 2.597805 CCGTCCCTCGATCCCGAT 60.598 66.667 0.00 0.00 44.62 4.18
695 705 3.804638 TAGGCCGTCCCTCGATCCC 62.805 68.421 0.00 0.00 44.96 3.85
696 706 2.203451 TAGGCCGTCCCTCGATCC 60.203 66.667 0.00 0.00 44.96 3.36
697 707 2.562876 GGTAGGCCGTCCCTCGATC 61.563 68.421 0.00 0.00 44.96 3.69
698 708 2.521224 GGTAGGCCGTCCCTCGAT 60.521 66.667 0.00 0.00 44.96 3.59
708 718 3.258228 AAACGGGGAACGGTAGGCC 62.258 63.158 0.00 0.00 45.59 5.19
709 719 1.742880 GAAACGGGGAACGGTAGGC 60.743 63.158 0.00 0.00 45.59 3.93
710 720 1.078918 GGAAACGGGGAACGGTAGG 60.079 63.158 0.00 0.00 45.59 3.18
711 721 4.604114 GGAAACGGGGAACGGTAG 57.396 61.111 0.00 0.00 45.59 3.18
723 733 5.014808 TCTTAACCATAGTAGCCGGAAAC 57.985 43.478 5.05 1.02 0.00 2.78
724 734 5.221581 GGATCTTAACCATAGTAGCCGGAAA 60.222 44.000 5.05 0.00 0.00 3.13
725 735 4.282703 GGATCTTAACCATAGTAGCCGGAA 59.717 45.833 5.05 0.00 0.00 4.30
726 736 3.830755 GGATCTTAACCATAGTAGCCGGA 59.169 47.826 5.05 0.00 0.00 5.14
727 737 3.833070 AGGATCTTAACCATAGTAGCCGG 59.167 47.826 0.00 0.00 0.00 6.13
728 738 5.470047 AAGGATCTTAACCATAGTAGCCG 57.530 43.478 0.00 0.00 0.00 5.52
729 739 5.927115 CGAAAGGATCTTAACCATAGTAGCC 59.073 44.000 0.00 0.00 0.00 3.93
750 760 0.320946 CGCTGAGGTTAAACCCCGAA 60.321 55.000 0.00 0.00 39.75 4.30
753 763 1.209747 AGATCGCTGAGGTTAAACCCC 59.790 52.381 0.00 0.00 39.75 4.95
766 776 0.469144 GAGGAGGGGAAGAGATCGCT 60.469 60.000 0.00 0.00 40.67 4.93
771 781 1.706575 CCAGGAGGAGGGGAAGAGA 59.293 63.158 0.00 0.00 36.89 3.10
783 793 3.302347 AAAGCCGACGAGCCAGGAG 62.302 63.158 0.00 0.00 0.00 3.69
787 797 0.669318 CTAACAAAGCCGACGAGCCA 60.669 55.000 0.00 0.00 0.00 4.75
867 877 0.323178 CCTCCTGGTGCTGCTTGATT 60.323 55.000 0.00 0.00 0.00 2.57
927 937 1.307976 ATAGGTCCTCCTGCTCCCCT 61.308 60.000 0.00 0.00 44.81 4.79
967 977 2.987125 GTGGCCGCCTTCCTTCTA 59.013 61.111 11.61 0.00 0.00 2.10
1209 1353 3.332485 TGGCTTCCCTTGTAGGTTGTTAT 59.668 43.478 0.00 0.00 31.93 1.89
1339 6446 1.375908 GAGGACGTTGCATGCCTCA 60.376 57.895 16.68 0.00 44.91 3.86
1345 6452 1.153628 GTAGCCGAGGACGTTGCAT 60.154 57.895 0.00 0.00 37.88 3.96
1411 6518 3.636231 CAGTGCTTGGGGTCCCGA 61.636 66.667 0.48 0.00 39.42 5.14
1440 6547 1.323271 CCGCTCTGGCCTGAACTCTA 61.323 60.000 13.89 0.00 34.44 2.43
1441 6548 2.654079 CCGCTCTGGCCTGAACTCT 61.654 63.158 13.89 0.00 34.44 3.24
1472 6579 3.976015 TGTTTCCCTTGAAGTCCACTTT 58.024 40.909 0.00 0.00 36.11 2.66
1491 6598 3.255969 ACGGTGTGTACTCAAAGTTGT 57.744 42.857 0.00 0.00 0.00 3.32
1531 6638 1.878775 GAACAGCATGCCTGGACAC 59.121 57.895 15.66 0.00 46.14 3.67
1695 11042 2.739293 GCGCTAATTAAGAGGCACAC 57.261 50.000 0.00 0.00 0.00 3.82
1729 11076 7.818997 ACTTAGTCGATCACATCCACTATTA 57.181 36.000 0.00 0.00 33.90 0.98
1730 11077 6.716934 ACTTAGTCGATCACATCCACTATT 57.283 37.500 0.00 0.00 33.90 1.73
1751 11098 3.197766 TGGAATGTTCGATCTAGCCAACT 59.802 43.478 0.00 0.00 0.00 3.16
1911 11270 4.577096 ACACTTATATTGGGATGGAGGGA 58.423 43.478 0.00 0.00 0.00 4.20
1912 11271 4.599241 AGACACTTATATTGGGATGGAGGG 59.401 45.833 0.00 0.00 0.00 4.30
1913 11272 5.832539 AGACACTTATATTGGGATGGAGG 57.167 43.478 0.00 0.00 0.00 4.30
1914 11273 8.432805 AGTTAAGACACTTATATTGGGATGGAG 58.567 37.037 0.00 0.00 0.00 3.86
1915 11274 8.331931 AGTTAAGACACTTATATTGGGATGGA 57.668 34.615 0.00 0.00 0.00 3.41
1916 11275 8.980481 AAGTTAAGACACTTATATTGGGATGG 57.020 34.615 0.00 0.00 35.10 3.51
1918 11277 9.975218 ACAAAGTTAAGACACTTATATTGGGAT 57.025 29.630 0.00 0.00 35.87 3.85
1926 11285 9.857957 GAGCTAGTACAAAGTTAAGACACTTAT 57.142 33.333 0.00 0.00 35.87 1.73
1927 11286 9.075678 AGAGCTAGTACAAAGTTAAGACACTTA 57.924 33.333 0.00 0.00 35.87 2.24
1928 11287 7.953752 AGAGCTAGTACAAAGTTAAGACACTT 58.046 34.615 0.00 0.00 38.74 3.16
1929 11288 7.527568 AGAGCTAGTACAAAGTTAAGACACT 57.472 36.000 0.00 0.00 0.00 3.55
1930 11289 8.513774 ACTAGAGCTAGTACAAAGTTAAGACAC 58.486 37.037 8.35 0.00 43.98 3.67
1931 11290 8.632906 ACTAGAGCTAGTACAAAGTTAAGACA 57.367 34.615 8.35 0.00 43.98 3.41
1969 11328 8.761497 CGTCTCAAAATAAGTGTCTCAAACTTA 58.239 33.333 0.00 0.00 42.63 2.24
1970 11329 7.254795 CCGTCTCAAAATAAGTGTCTCAAACTT 60.255 37.037 0.00 0.00 40.82 2.66
1971 11330 6.202954 CCGTCTCAAAATAAGTGTCTCAAACT 59.797 38.462 0.00 0.00 0.00 2.66
1972 11331 6.202188 TCCGTCTCAAAATAAGTGTCTCAAAC 59.798 38.462 0.00 0.00 0.00 2.93
1973 11332 6.285224 TCCGTCTCAAAATAAGTGTCTCAAA 58.715 36.000 0.00 0.00 0.00 2.69
1974 11333 5.849510 TCCGTCTCAAAATAAGTGTCTCAA 58.150 37.500 0.00 0.00 0.00 3.02
1975 11334 5.462530 TCCGTCTCAAAATAAGTGTCTCA 57.537 39.130 0.00 0.00 0.00 3.27
1976 11335 4.865365 CCTCCGTCTCAAAATAAGTGTCTC 59.135 45.833 0.00 0.00 0.00 3.36
1977 11336 4.322801 CCCTCCGTCTCAAAATAAGTGTCT 60.323 45.833 0.00 0.00 0.00 3.41
1978 11337 3.933332 CCCTCCGTCTCAAAATAAGTGTC 59.067 47.826 0.00 0.00 0.00 3.67
1979 11338 3.581332 TCCCTCCGTCTCAAAATAAGTGT 59.419 43.478 0.00 0.00 0.00 3.55
1980 11339 4.184629 CTCCCTCCGTCTCAAAATAAGTG 58.815 47.826 0.00 0.00 0.00 3.16
1981 11340 3.838903 ACTCCCTCCGTCTCAAAATAAGT 59.161 43.478 0.00 0.00 0.00 2.24
1982 11341 4.473477 ACTCCCTCCGTCTCAAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
1983 11342 5.424252 ACATACTCCCTCCGTCTCAAAATAA 59.576 40.000 0.00 0.00 0.00 1.40
1984 11343 4.960469 ACATACTCCCTCCGTCTCAAAATA 59.040 41.667 0.00 0.00 0.00 1.40
1985 11344 3.775316 ACATACTCCCTCCGTCTCAAAAT 59.225 43.478 0.00 0.00 0.00 1.82
1986 11345 3.056107 CACATACTCCCTCCGTCTCAAAA 60.056 47.826 0.00 0.00 0.00 2.44
1987 11346 2.496070 CACATACTCCCTCCGTCTCAAA 59.504 50.000 0.00 0.00 0.00 2.69
1988 11347 2.100197 CACATACTCCCTCCGTCTCAA 58.900 52.381 0.00 0.00 0.00 3.02
1989 11348 1.685180 CCACATACTCCCTCCGTCTCA 60.685 57.143 0.00 0.00 0.00 3.27
1990 11349 1.033574 CCACATACTCCCTCCGTCTC 58.966 60.000 0.00 0.00 0.00 3.36
1991 11350 0.335361 ACCACATACTCCCTCCGTCT 59.665 55.000 0.00 0.00 0.00 4.18
1992 11351 1.192428 AACCACATACTCCCTCCGTC 58.808 55.000 0.00 0.00 0.00 4.79
1993 11352 1.553704 GAAACCACATACTCCCTCCGT 59.446 52.381 0.00 0.00 0.00 4.69
1994 11353 1.134491 GGAAACCACATACTCCCTCCG 60.134 57.143 0.00 0.00 0.00 4.63
1995 11354 2.711978 GGAAACCACATACTCCCTCC 57.288 55.000 0.00 0.00 0.00 4.30
2057 11416 9.331282 CGAGGAGTAGATCTTGGAAATTTTATT 57.669 33.333 0.00 0.00 0.00 1.40
2058 11417 8.487028 ACGAGGAGTAGATCTTGGAAATTTTAT 58.513 33.333 0.00 0.00 0.00 1.40
2082 11441 0.393077 ACCAGAAGGGAGTTCACACG 59.607 55.000 0.00 0.00 41.15 4.49
2103 11462 2.239124 TGGCGAACGTGGACGAAAC 61.239 57.895 6.12 4.40 43.02 2.78
2109 11468 2.601067 TAGGGTGGCGAACGTGGA 60.601 61.111 0.00 0.00 0.00 4.02
2127 11486 0.391263 GAAACCGCCAGTACCCTCAG 60.391 60.000 0.00 0.00 0.00 3.35
2147 11506 2.847234 AGGTGGTTGAGGGCACGA 60.847 61.111 0.00 0.00 0.00 4.35
2151 11510 0.967380 CCAATCAGGTGGTTGAGGGC 60.967 60.000 4.47 0.00 33.63 5.19
2154 11513 3.423539 TTCTCCAATCAGGTGGTTGAG 57.576 47.619 4.47 1.29 39.88 3.02
2197 11563 2.620585 GCCCATAGTTCTTGAAGATGGC 59.379 50.000 6.97 4.45 36.52 4.40
2288 11655 4.228210 AGCCAAACATGGAAGAAGATCCTA 59.772 41.667 0.00 0.00 40.35 2.94
2289 11656 3.011032 AGCCAAACATGGAAGAAGATCCT 59.989 43.478 0.00 0.00 40.35 3.24
2525 11894 9.774413 ACTTTTCACGGGTATATTAATCTAAGG 57.226 33.333 0.00 0.00 0.00 2.69
2529 11898 9.151177 TCCTACTTTTCACGGGTATATTAATCT 57.849 33.333 0.00 0.00 0.00 2.40
2530 11899 9.420551 CTCCTACTTTTCACGGGTATATTAATC 57.579 37.037 0.00 0.00 0.00 1.75
2532 11901 8.537728 TCTCCTACTTTTCACGGGTATATTAA 57.462 34.615 0.00 0.00 0.00 1.40
2543 11916 6.827586 TCTCTTCTCTCTCCTACTTTTCAC 57.172 41.667 0.00 0.00 0.00 3.18
2648 12043 4.506758 CTTGAAAATACCCAAAGCCCATG 58.493 43.478 0.00 0.00 0.00 3.66
2682 12078 6.717540 ACACCACCAAATAAAGTATTGCACTA 59.282 34.615 0.00 0.00 36.04 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.