Multiple sequence alignment - TraesCS2B01G093200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G093200 chr2B 100.000 2917 0 0 430 3346 53657640 53660556 0.000000e+00 5387.0
1 TraesCS2B01G093200 chr2B 93.758 817 50 1 2472 3287 53584255 53585071 0.000000e+00 1225.0
2 TraesCS2B01G093200 chr2B 82.064 1182 193 17 2115 3287 53666331 53667502 0.000000e+00 990.0
3 TraesCS2B01G093200 chr2B 85.988 835 88 13 822 1636 53665515 53666340 0.000000e+00 867.0
4 TraesCS2B01G093200 chr2B 89.940 666 60 4 978 1636 53583114 53583779 0.000000e+00 852.0
5 TraesCS2B01G093200 chr2B 90.504 337 32 0 2115 2451 53583770 53584106 2.370000e-121 446.0
6 TraesCS2B01G093200 chr2B 100.000 111 0 0 1 111 53657211 53657321 4.380000e-49 206.0
7 TraesCS2B01G093200 chr2B 81.921 177 28 4 444 618 797539843 797539669 2.690000e-31 147.0
8 TraesCS2B01G093200 chr2B 91.045 67 6 0 3278 3344 697141594 697141528 1.280000e-14 91.6
9 TraesCS2B01G093200 chr2B 91.045 67 6 0 3278 3344 697156563 697156497 1.280000e-14 91.6
10 TraesCS2B01G093200 chrUn 91.970 1183 81 6 2115 3287 24905213 24906391 0.000000e+00 1646.0
11 TraesCS2B01G093200 chrUn 88.390 1025 85 15 2115 3105 24900939 24901963 0.000000e+00 1203.0
12 TraesCS2B01G093200 chrUn 91.399 872 49 12 777 1636 24904365 24905222 0.000000e+00 1171.0
13 TraesCS2B01G093200 chrUn 82.727 1181 186 16 2115 3287 24911442 24912612 0.000000e+00 1035.0
14 TraesCS2B01G093200 chrUn 84.082 1024 110 24 660 1636 24910434 24911451 0.000000e+00 939.0
15 TraesCS2B01G093200 chrUn 90.240 666 58 3 978 1636 24900283 24900948 0.000000e+00 863.0
16 TraesCS2B01G093200 chr2A 89.771 1222 79 12 431 1636 35653713 35654904 0.000000e+00 1522.0
17 TraesCS2B01G093200 chr2A 92.843 992 69 2 2115 3105 35654895 35655885 0.000000e+00 1437.0
18 TraesCS2B01G093200 chr2A 94.155 941 54 1 2347 3287 35650164 35651103 0.000000e+00 1432.0
19 TraesCS2B01G093200 chr2A 86.606 1202 107 23 2121 3287 35635020 35636202 0.000000e+00 1279.0
20 TraesCS2B01G093200 chr2A 89.790 666 58 5 978 1636 35634361 35635023 0.000000e+00 845.0
21 TraesCS2B01G093200 chr2A 82.286 175 27 4 443 616 738116988 738117159 7.480000e-32 148.0
22 TraesCS2B01G093200 chr2A 91.667 48 3 1 3223 3269 35655948 35655995 7.750000e-07 65.8
23 TraesCS2B01G093200 chr3B 99.378 482 3 0 1636 2117 637616150 637615669 0.000000e+00 874.0
24 TraesCS2B01G093200 chr3B 98.545 481 7 0 1636 2116 564026572 564026092 0.000000e+00 850.0
25 TraesCS2B01G093200 chr3B 97.500 480 12 0 1636 2115 221532072 221531593 0.000000e+00 821.0
26 TraesCS2B01G093200 chr3B 81.714 175 30 2 444 618 95459153 95458981 9.680000e-31 145.0
27 TraesCS2B01G093200 chr3B 81.250 176 30 3 444 618 12631040 12630867 4.500000e-29 139.0
28 TraesCS2B01G093200 chr3B 89.041 73 6 2 3274 3344 487221485 487221413 4.600000e-14 89.8
29 TraesCS2B01G093200 chr6A 99.170 482 4 0 1636 2117 93440358 93440839 0.000000e+00 869.0
30 TraesCS2B01G093200 chr6A 98.958 480 5 0 1636 2115 108088770 108088291 0.000000e+00 859.0
31 TraesCS2B01G093200 chr6A 98.333 480 8 0 1636 2115 102348770 102348291 0.000000e+00 843.0
32 TraesCS2B01G093200 chr6A 80.200 601 97 15 1025 1617 120130157 120129571 6.630000e-117 431.0
33 TraesCS2B01G093200 chr7A 94.845 485 25 0 1633 2117 464266147 464265663 0.000000e+00 758.0
34 TraesCS2B01G093200 chr5A 95.000 480 24 0 1636 2115 612708157 612707678 0.000000e+00 754.0
35 TraesCS2B01G093200 chr5A 93.939 495 30 0 1627 2121 707034464 707034958 0.000000e+00 749.0
36 TraesCS2B01G093200 chr6B 80.097 618 105 13 1025 1636 184725629 184725024 8.520000e-121 444.0
37 TraesCS2B01G093200 chr6B 96.667 60 2 0 3285 3344 417466269 417466210 2.120000e-17 100.0
38 TraesCS2B01G093200 chr4A 81.818 176 30 2 444 618 51132507 51132681 2.690000e-31 147.0
39 TraesCS2B01G093200 chr7B 81.215 181 30 4 444 622 27491028 27491206 3.480000e-30 143.0
40 TraesCS2B01G093200 chr7B 96.491 57 2 0 3285 3341 13756093 13756149 9.880000e-16 95.3
41 TraesCS2B01G093200 chr7D 80.556 180 31 4 441 618 563534505 563534682 5.820000e-28 135.0
42 TraesCS2B01G093200 chr4D 81.006 179 25 7 444 618 210449272 210449099 2.090000e-27 134.0
43 TraesCS2B01G093200 chr5B 96.491 57 2 0 3288 3344 288005382 288005326 9.880000e-16 95.3
44 TraesCS2B01G093200 chr2D 96.491 57 2 0 3288 3344 466205544 466205488 9.880000e-16 95.3
45 TraesCS2B01G093200 chr1B 96.491 57 2 0 3288 3344 486243223 486243167 9.880000e-16 95.3
46 TraesCS2B01G093200 chr3D 88.000 75 8 1 3271 3344 603574600 603574526 1.650000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G093200 chr2B 53657211 53660556 3345 False 2796.50 5387 100.000000 1 3346 2 chr2B.!!$F2 3345
1 TraesCS2B01G093200 chr2B 53665515 53667502 1987 False 928.50 990 84.026000 822 3287 2 chr2B.!!$F3 2465
2 TraesCS2B01G093200 chr2B 53583114 53585071 1957 False 841.00 1225 91.400667 978 3287 3 chr2B.!!$F1 2309
3 TraesCS2B01G093200 chrUn 24900283 24906391 6108 False 1220.75 1646 90.499750 777 3287 4 chrUn.!!$F1 2510
4 TraesCS2B01G093200 chrUn 24910434 24912612 2178 False 987.00 1035 83.404500 660 3287 2 chrUn.!!$F2 2627
5 TraesCS2B01G093200 chr2A 35650164 35655995 5831 False 1114.20 1522 92.109000 431 3287 4 chr2A.!!$F3 2856
6 TraesCS2B01G093200 chr2A 35634361 35636202 1841 False 1062.00 1279 88.198000 978 3287 2 chr2A.!!$F2 2309
7 TraesCS2B01G093200 chr6A 120129571 120130157 586 True 431.00 431 80.200000 1025 1617 1 chr6A.!!$R3 592
8 TraesCS2B01G093200 chr6B 184725024 184725629 605 True 444.00 444 80.097000 1025 1636 1 chr6B.!!$R1 611

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
81 82 0.164002 GTTCGAGTCCGCTCTTTTGC 59.836 55.0 0.0 0.0 39.53 3.68 F
1860 9349 0.036010 CCTGACGGTCAGCATTCCTT 60.036 55.0 28.5 0.0 42.98 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1947 9436 0.030638 CCAACAGCCAAAACGTGAGG 59.969 55.0 0.00 0.0 0.00 3.86 R
2816 10439 1.323271 CCGCTCTGGCCTGAACTCTA 61.323 60.0 13.89 0.0 34.44 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.359975 GCTGTGGCCTGGTGGTAC 60.360 66.667 3.32 0.00 35.27 3.34
33 34 2.845317 TGTGGCCTGGTGGTACGT 60.845 61.111 3.32 0.00 35.27 3.57
35 36 2.845317 TGGCCTGGTGGTACGTGT 60.845 61.111 3.32 0.00 35.27 4.49
36 37 2.047560 GGCCTGGTGGTACGTGTC 60.048 66.667 0.00 0.00 35.27 3.67
37 38 2.580601 GGCCTGGTGGTACGTGTCT 61.581 63.158 0.00 0.00 35.27 3.41
38 39 1.374252 GCCTGGTGGTACGTGTCTG 60.374 63.158 0.00 0.00 35.27 3.51
39 40 1.374252 CCTGGTGGTACGTGTCTGC 60.374 63.158 0.00 0.00 0.00 4.26
41 42 0.667487 CTGGTGGTACGTGTCTGCTG 60.667 60.000 0.00 0.00 0.00 4.41
42 43 2.027625 GGTGGTACGTGTCTGCTGC 61.028 63.158 0.00 0.00 0.00 5.25
43 44 1.006102 GTGGTACGTGTCTGCTGCT 60.006 57.895 0.00 0.00 0.00 4.24
44 45 1.006220 TGGTACGTGTCTGCTGCTG 60.006 57.895 0.00 0.00 0.00 4.41
45 46 2.383527 GGTACGTGTCTGCTGCTGC 61.384 63.158 8.89 8.89 40.20 5.25
46 47 2.048222 TACGTGTCTGCTGCTGCC 60.048 61.111 13.47 0.00 38.71 4.85
47 48 3.589654 TACGTGTCTGCTGCTGCCC 62.590 63.158 13.47 1.80 38.71 5.36
48 49 4.694233 CGTGTCTGCTGCTGCCCT 62.694 66.667 13.47 0.00 38.71 5.19
49 50 2.745492 GTGTCTGCTGCTGCCCTC 60.745 66.667 13.47 3.86 38.71 4.30
50 51 4.383861 TGTCTGCTGCTGCCCTCG 62.384 66.667 13.47 0.00 38.71 4.63
51 52 4.074526 GTCTGCTGCTGCCCTCGA 62.075 66.667 13.47 1.85 38.71 4.04
52 53 3.313524 TCTGCTGCTGCCCTCGAA 61.314 61.111 13.47 0.00 38.71 3.71
55 56 3.130160 GCTGCTGCCCTCGAAAGG 61.130 66.667 3.85 0.00 42.95 3.11
64 65 2.358737 CTCGAAAGGGCGCTGGTT 60.359 61.111 7.64 0.00 0.00 3.67
65 66 2.358247 TCGAAAGGGCGCTGGTTC 60.358 61.111 7.64 4.51 0.00 3.62
66 67 3.788766 CGAAAGGGCGCTGGTTCG 61.789 66.667 19.11 19.11 37.18 3.95
68 69 2.358737 AAAGGGCGCTGGTTCGAG 60.359 61.111 7.64 0.00 0.00 4.04
69 70 3.178540 AAAGGGCGCTGGTTCGAGT 62.179 57.895 7.64 0.00 0.00 4.18
75 76 2.507324 GCTGGTTCGAGTCCGCTC 60.507 66.667 13.47 0.00 38.35 5.03
76 77 2.995872 GCTGGTTCGAGTCCGCTCT 61.996 63.158 13.47 0.00 39.53 4.09
79 80 0.391597 TGGTTCGAGTCCGCTCTTTT 59.608 50.000 4.67 0.00 39.53 2.27
80 81 0.790814 GGTTCGAGTCCGCTCTTTTG 59.209 55.000 0.00 0.00 39.53 2.44
81 82 0.164002 GTTCGAGTCCGCTCTTTTGC 59.836 55.000 0.00 0.00 39.53 3.68
82 83 0.249699 TTCGAGTCCGCTCTTTTGCA 60.250 50.000 0.00 0.00 39.53 4.08
83 84 0.944311 TCGAGTCCGCTCTTTTGCAC 60.944 55.000 0.00 0.00 39.53 4.57
84 85 1.221466 CGAGTCCGCTCTTTTGCACA 61.221 55.000 0.00 0.00 39.53 4.57
86 87 0.663153 AGTCCGCTCTTTTGCACAAC 59.337 50.000 0.00 0.00 0.00 3.32
88 89 1.065551 GTCCGCTCTTTTGCACAACTT 59.934 47.619 0.00 0.00 0.00 2.66
89 90 1.748493 TCCGCTCTTTTGCACAACTTT 59.252 42.857 0.00 0.00 0.00 2.66
90 91 2.165437 TCCGCTCTTTTGCACAACTTTT 59.835 40.909 0.00 0.00 0.00 2.27
610 3731 9.503399 AATACGAAGGGATTAATAAATCAGGAC 57.497 33.333 0.00 0.00 42.88 3.85
618 3739 6.872547 GGATTAATAAATCAGGACGGAGGTAC 59.127 42.308 0.00 0.00 42.88 3.34
619 3740 6.795144 TTAATAAATCAGGACGGAGGTACA 57.205 37.500 0.00 0.00 0.00 2.90
622 3743 3.821421 AATCAGGACGGAGGTACAATC 57.179 47.619 0.00 0.00 0.00 2.67
699 3820 5.447954 CGTAGTGTGTGGATGAACAACAAAA 60.448 40.000 0.00 0.00 0.00 2.44
749 3870 1.524849 GGAATCTCCGCTCCCAAGC 60.525 63.158 0.00 0.00 45.56 4.01
757 3878 2.811317 GCTCCCAAGCGAGTCGTG 60.811 66.667 15.08 5.24 39.10 4.35
758 3879 2.651361 CTCCCAAGCGAGTCGTGT 59.349 61.111 15.08 0.00 0.00 4.49
759 3880 1.880894 CTCCCAAGCGAGTCGTGTA 59.119 57.895 15.08 0.00 0.00 2.90
760 3881 0.179161 CTCCCAAGCGAGTCGTGTAG 60.179 60.000 15.08 2.11 0.00 2.74
761 3882 1.153823 CCCAAGCGAGTCGTGTAGG 60.154 63.158 15.08 10.88 0.00 3.18
762 3883 1.153823 CCAAGCGAGTCGTGTAGGG 60.154 63.158 15.08 5.52 0.00 3.53
763 3884 1.592400 CCAAGCGAGTCGTGTAGGGA 61.592 60.000 15.08 0.00 0.00 4.20
764 3885 0.242825 CAAGCGAGTCGTGTAGGGAA 59.757 55.000 15.08 0.00 0.00 3.97
765 3886 1.135083 CAAGCGAGTCGTGTAGGGAAT 60.135 52.381 15.08 0.00 0.00 3.01
766 3887 0.739561 AGCGAGTCGTGTAGGGAATC 59.260 55.000 15.08 0.00 0.00 2.52
767 3888 0.739561 GCGAGTCGTGTAGGGAATCT 59.260 55.000 15.08 0.00 0.00 2.40
768 3889 1.268640 GCGAGTCGTGTAGGGAATCTC 60.269 57.143 15.08 0.00 0.00 2.75
910 4082 5.152097 CGATCGACGCCAGTTTATAATAGT 58.848 41.667 10.26 0.00 34.51 2.12
912 4084 6.965500 CGATCGACGCCAGTTTATAATAGTAT 59.035 38.462 10.26 0.00 34.51 2.12
917 4089 9.017669 CGACGCCAGTTTATAATAGTATATTCC 57.982 37.037 0.00 0.00 0.00 3.01
943 4136 1.416049 CGTGCCGCATGCGTATATC 59.584 57.895 35.55 20.00 45.60 1.63
975 4169 2.430610 CCCCAGCCTTCTCTCGAGG 61.431 68.421 13.56 3.44 37.35 4.63
1504 8993 1.723870 GCCGCCATTTCAGCTAGTG 59.276 57.895 0.00 0.00 0.00 2.74
1508 8997 1.723870 CCATTTCAGCTAGTGCCGC 59.276 57.895 0.00 0.00 40.80 6.53
1563 9052 1.065551 CTCATCGCAGACATGACCGTA 59.934 52.381 0.00 0.00 42.51 4.02
1579 9068 3.220658 TACGCGCCATGATCGGGA 61.221 61.111 23.35 10.11 41.52 5.14
1629 9118 2.520968 GTGCTCCAACAGGGGGTT 59.479 61.111 0.00 0.00 40.42 4.11
1630 9119 1.765074 GTGCTCCAACAGGGGGTTA 59.235 57.895 0.00 0.00 40.42 2.85
1631 9120 0.111639 GTGCTCCAACAGGGGGTTAA 59.888 55.000 0.00 0.00 40.42 2.01
1632 9121 0.404040 TGCTCCAACAGGGGGTTAAG 59.596 55.000 0.00 0.00 40.42 1.85
1633 9122 0.696501 GCTCCAACAGGGGGTTAAGA 59.303 55.000 0.00 0.00 40.42 2.10
1634 9123 1.285078 GCTCCAACAGGGGGTTAAGAT 59.715 52.381 0.00 0.00 40.42 2.40
1635 9124 2.684038 GCTCCAACAGGGGGTTAAGATC 60.684 54.545 0.00 0.00 40.42 2.75
1636 9125 2.576191 CTCCAACAGGGGGTTAAGATCA 59.424 50.000 0.00 0.00 37.72 2.92
1637 9126 3.197983 TCCAACAGGGGGTTAAGATCAT 58.802 45.455 0.00 0.00 37.72 2.45
1638 9127 4.376223 TCCAACAGGGGGTTAAGATCATA 58.624 43.478 0.00 0.00 37.72 2.15
1639 9128 4.412199 TCCAACAGGGGGTTAAGATCATAG 59.588 45.833 0.00 0.00 37.72 2.23
1640 9129 4.166144 CCAACAGGGGGTTAAGATCATAGT 59.834 45.833 0.00 0.00 37.72 2.12
1641 9130 5.340027 CCAACAGGGGGTTAAGATCATAGTT 60.340 44.000 0.00 0.00 37.72 2.24
1642 9131 5.373812 ACAGGGGGTTAAGATCATAGTTG 57.626 43.478 0.00 0.00 0.00 3.16
1643 9132 4.137543 CAGGGGGTTAAGATCATAGTTGC 58.862 47.826 0.00 0.00 0.00 4.17
1644 9133 3.138468 AGGGGGTTAAGATCATAGTTGCC 59.862 47.826 0.00 0.00 0.00 4.52
1645 9134 3.117663 GGGGGTTAAGATCATAGTTGCCA 60.118 47.826 0.00 0.00 0.00 4.92
1646 9135 4.447762 GGGGGTTAAGATCATAGTTGCCAT 60.448 45.833 0.00 0.00 0.00 4.40
1647 9136 4.520492 GGGGTTAAGATCATAGTTGCCATG 59.480 45.833 0.00 0.00 0.00 3.66
1648 9137 5.133221 GGGTTAAGATCATAGTTGCCATGT 58.867 41.667 0.00 0.00 0.00 3.21
1649 9138 5.594317 GGGTTAAGATCATAGTTGCCATGTT 59.406 40.000 0.00 0.00 0.00 2.71
1650 9139 6.096846 GGGTTAAGATCATAGTTGCCATGTTT 59.903 38.462 0.00 0.00 0.00 2.83
1651 9140 7.196331 GGTTAAGATCATAGTTGCCATGTTTC 58.804 38.462 0.00 0.00 0.00 2.78
1652 9141 5.841957 AAGATCATAGTTGCCATGTTTCC 57.158 39.130 0.00 0.00 0.00 3.13
1653 9142 3.879295 AGATCATAGTTGCCATGTTTCCG 59.121 43.478 0.00 0.00 0.00 4.30
1654 9143 2.364632 TCATAGTTGCCATGTTTCCGG 58.635 47.619 0.00 0.00 0.00 5.14
1655 9144 2.091541 CATAGTTGCCATGTTTCCGGT 58.908 47.619 0.00 0.00 0.00 5.28
1656 9145 3.055021 TCATAGTTGCCATGTTTCCGGTA 60.055 43.478 0.00 0.00 0.00 4.02
1657 9146 1.530323 AGTTGCCATGTTTCCGGTAC 58.470 50.000 0.00 1.45 0.00 3.34
1670 9159 2.267961 GGTACGGTGGGAGCAAGG 59.732 66.667 0.00 0.00 0.00 3.61
1671 9160 2.288025 GGTACGGTGGGAGCAAGGA 61.288 63.158 0.00 0.00 0.00 3.36
1672 9161 1.675219 GTACGGTGGGAGCAAGGAA 59.325 57.895 0.00 0.00 0.00 3.36
1673 9162 0.672711 GTACGGTGGGAGCAAGGAAC 60.673 60.000 0.00 0.00 0.00 3.62
1674 9163 2.162338 TACGGTGGGAGCAAGGAACG 62.162 60.000 0.00 0.00 0.00 3.95
1675 9164 2.359975 GGTGGGAGCAAGGAACGG 60.360 66.667 0.00 0.00 0.00 4.44
1676 9165 2.359975 GTGGGAGCAAGGAACGGG 60.360 66.667 0.00 0.00 0.00 5.28
1677 9166 2.528127 TGGGAGCAAGGAACGGGA 60.528 61.111 0.00 0.00 0.00 5.14
1678 9167 2.150719 TGGGAGCAAGGAACGGGAA 61.151 57.895 0.00 0.00 0.00 3.97
1679 9168 1.674651 GGGAGCAAGGAACGGGAAC 60.675 63.158 0.00 0.00 0.00 3.62
1691 9180 3.198582 GGGAACGAGGGACGAGAG 58.801 66.667 0.00 0.00 45.77 3.20
1702 9191 2.282251 ACGAGAGTCGGTGGCTGA 60.282 61.111 0.86 0.00 45.59 4.26
1703 9192 1.901948 ACGAGAGTCGGTGGCTGAA 60.902 57.895 0.86 0.00 45.59 3.02
1704 9193 1.289066 CGAGAGTCGGTGGCTGAAA 59.711 57.895 0.00 0.00 36.00 2.69
1705 9194 0.319555 CGAGAGTCGGTGGCTGAAAA 60.320 55.000 0.00 0.00 36.00 2.29
1706 9195 1.872237 CGAGAGTCGGTGGCTGAAAAA 60.872 52.381 0.00 0.00 36.00 1.94
1725 9214 4.645863 AAAAATAGGGTACAACGAGGGT 57.354 40.909 0.00 0.00 0.00 4.34
1726 9215 5.760484 AAAAATAGGGTACAACGAGGGTA 57.240 39.130 0.00 0.00 0.00 3.69
1727 9216 5.963214 AAAATAGGGTACAACGAGGGTAT 57.037 39.130 0.00 0.00 0.00 2.73
1728 9217 7.436320 AAAAATAGGGTACAACGAGGGTATA 57.564 36.000 0.00 0.00 0.00 1.47
1729 9218 6.410942 AAATAGGGTACAACGAGGGTATAC 57.589 41.667 0.00 0.00 0.00 1.47
1730 9219 3.386932 AGGGTACAACGAGGGTATACA 57.613 47.619 5.01 0.00 0.00 2.29
1731 9220 3.919834 AGGGTACAACGAGGGTATACAT 58.080 45.455 5.01 0.00 0.00 2.29
1732 9221 3.893813 AGGGTACAACGAGGGTATACATC 59.106 47.826 5.01 1.38 0.00 3.06
1733 9222 3.893813 GGGTACAACGAGGGTATACATCT 59.106 47.826 5.01 1.40 0.00 2.90
1734 9223 4.022503 GGGTACAACGAGGGTATACATCTC 60.023 50.000 5.01 9.79 0.00 2.75
1735 9224 4.826183 GGTACAACGAGGGTATACATCTCT 59.174 45.833 17.62 5.75 0.00 3.10
1736 9225 5.301298 GGTACAACGAGGGTATACATCTCTT 59.699 44.000 17.62 9.82 0.00 2.85
1737 9226 6.488006 GGTACAACGAGGGTATACATCTCTTA 59.512 42.308 17.62 6.47 0.00 2.10
1738 9227 6.636562 ACAACGAGGGTATACATCTCTTAG 57.363 41.667 17.62 11.68 0.00 2.18
1739 9228 6.363065 ACAACGAGGGTATACATCTCTTAGA 58.637 40.000 17.62 0.00 0.00 2.10
1740 9229 6.262720 ACAACGAGGGTATACATCTCTTAGAC 59.737 42.308 17.62 0.00 0.00 2.59
1741 9230 4.996122 ACGAGGGTATACATCTCTTAGACG 59.004 45.833 17.62 10.15 0.00 4.18
1742 9231 5.221601 ACGAGGGTATACATCTCTTAGACGA 60.222 44.000 17.62 0.00 0.00 4.20
1743 9232 5.699915 CGAGGGTATACATCTCTTAGACGAA 59.300 44.000 17.62 0.00 0.00 3.85
1744 9233 6.372103 CGAGGGTATACATCTCTTAGACGAAT 59.628 42.308 17.62 0.00 0.00 3.34
1745 9234 7.094720 CGAGGGTATACATCTCTTAGACGAATT 60.095 40.741 17.62 0.00 0.00 2.17
1746 9235 8.480133 AGGGTATACATCTCTTAGACGAATTT 57.520 34.615 5.01 0.00 0.00 1.82
1747 9236 8.925338 AGGGTATACATCTCTTAGACGAATTTT 58.075 33.333 5.01 0.00 0.00 1.82
1748 9237 9.543783 GGGTATACATCTCTTAGACGAATTTTT 57.456 33.333 5.01 0.00 0.00 1.94
1777 9266 2.389713 GACGCGATCCAATCCATTTG 57.610 50.000 15.93 0.00 34.93 2.32
1789 9278 4.920376 CAATCCATTTGGGTACGATGAAC 58.080 43.478 0.00 0.00 38.11 3.18
1790 9279 2.993937 TCCATTTGGGTACGATGAACC 58.006 47.619 0.00 0.00 38.11 3.62
1794 9283 3.302129 GGGTACGATGAACCCGGT 58.698 61.111 0.00 0.00 46.95 5.28
1795 9284 2.503775 GGGTACGATGAACCCGGTA 58.496 57.895 0.00 0.00 46.95 4.02
1796 9285 0.103026 GGGTACGATGAACCCGGTAC 59.897 60.000 0.00 0.00 46.95 3.34
1810 9299 3.879912 GGTACGGTATCATGGGTCG 57.120 57.895 0.00 0.00 0.00 4.79
1811 9300 1.321474 GGTACGGTATCATGGGTCGA 58.679 55.000 0.00 0.00 0.00 4.20
1812 9301 1.268899 GGTACGGTATCATGGGTCGAG 59.731 57.143 0.00 0.00 0.00 4.04
1813 9302 1.268899 GTACGGTATCATGGGTCGAGG 59.731 57.143 0.00 0.00 0.00 4.63
1814 9303 0.106369 ACGGTATCATGGGTCGAGGA 60.106 55.000 0.00 0.00 0.00 3.71
1815 9304 1.037493 CGGTATCATGGGTCGAGGAA 58.963 55.000 0.00 0.00 0.00 3.36
1816 9305 1.269621 CGGTATCATGGGTCGAGGAAC 60.270 57.143 0.00 0.00 0.00 3.62
1817 9306 1.269621 GGTATCATGGGTCGAGGAACG 60.270 57.143 0.00 0.00 44.09 3.95
1818 9307 0.387929 TATCATGGGTCGAGGAACGC 59.612 55.000 0.00 0.00 42.26 4.84
1819 9308 1.613317 ATCATGGGTCGAGGAACGCA 61.613 55.000 0.00 0.00 44.82 5.24
1820 9309 1.811266 CATGGGTCGAGGAACGCAG 60.811 63.158 0.00 0.00 44.09 5.18
1841 9330 2.701073 TCTTGAAGAACGACGACTCC 57.299 50.000 0.00 0.00 0.00 3.85
1842 9331 1.268899 TCTTGAAGAACGACGACTCCC 59.731 52.381 0.00 0.00 0.00 4.30
1843 9332 1.269998 CTTGAAGAACGACGACTCCCT 59.730 52.381 0.00 0.00 0.00 4.20
1844 9333 0.596577 TGAAGAACGACGACTCCCTG 59.403 55.000 0.00 0.00 0.00 4.45
1845 9334 0.879765 GAAGAACGACGACTCCCTGA 59.120 55.000 0.00 0.00 0.00 3.86
1846 9335 0.597072 AAGAACGACGACTCCCTGAC 59.403 55.000 0.00 0.00 0.00 3.51
1847 9336 1.154263 GAACGACGACTCCCTGACG 60.154 63.158 0.00 0.00 39.53 4.35
1848 9337 2.524636 GAACGACGACTCCCTGACGG 62.525 65.000 0.00 0.00 38.09 4.79
1849 9338 3.054503 CGACGACTCCCTGACGGT 61.055 66.667 0.00 0.00 38.09 4.83
1850 9339 2.876219 GACGACTCCCTGACGGTC 59.124 66.667 0.00 0.00 38.09 4.79
1851 9340 1.970114 GACGACTCCCTGACGGTCA 60.970 63.158 10.88 10.88 38.09 4.02
1852 9341 1.924320 GACGACTCCCTGACGGTCAG 61.924 65.000 27.29 27.29 43.91 3.51
1853 9342 2.574399 GACTCCCTGACGGTCAGC 59.426 66.667 28.50 13.53 42.98 4.26
1854 9343 2.203640 ACTCCCTGACGGTCAGCA 60.204 61.111 28.50 17.41 42.98 4.41
1855 9344 1.608717 GACTCCCTGACGGTCAGCAT 61.609 60.000 28.50 14.96 42.98 3.79
1856 9345 1.194781 ACTCCCTGACGGTCAGCATT 61.195 55.000 28.50 12.06 42.98 3.56
1857 9346 0.460987 CTCCCTGACGGTCAGCATTC 60.461 60.000 28.50 0.00 42.98 2.67
1858 9347 1.450312 CCCTGACGGTCAGCATTCC 60.450 63.158 28.50 0.00 42.98 3.01
1859 9348 1.599047 CCTGACGGTCAGCATTCCT 59.401 57.895 28.50 0.00 42.98 3.36
1860 9349 0.036010 CCTGACGGTCAGCATTCCTT 60.036 55.000 28.50 0.00 42.98 3.36
1861 9350 1.081892 CTGACGGTCAGCATTCCTTG 58.918 55.000 23.81 0.00 37.72 3.61
1862 9351 0.396435 TGACGGTCAGCATTCCTTGT 59.604 50.000 6.76 0.00 0.00 3.16
1863 9352 1.202758 TGACGGTCAGCATTCCTTGTT 60.203 47.619 6.76 0.00 0.00 2.83
1864 9353 1.197721 GACGGTCAGCATTCCTTGTTG 59.802 52.381 2.62 0.00 37.86 3.33
1865 9354 1.238439 CGGTCAGCATTCCTTGTTGT 58.762 50.000 0.00 0.00 37.75 3.32
1866 9355 1.608590 CGGTCAGCATTCCTTGTTGTT 59.391 47.619 0.00 0.00 37.75 2.83
1867 9356 2.811431 CGGTCAGCATTCCTTGTTGTTA 59.189 45.455 0.00 0.00 37.75 2.41
1868 9357 3.252215 CGGTCAGCATTCCTTGTTGTTAA 59.748 43.478 0.00 0.00 37.75 2.01
1869 9358 4.082787 CGGTCAGCATTCCTTGTTGTTAAT 60.083 41.667 0.00 0.00 37.75 1.40
1870 9359 5.163513 GGTCAGCATTCCTTGTTGTTAATG 58.836 41.667 0.00 0.00 37.75 1.90
1871 9360 5.163513 GTCAGCATTCCTTGTTGTTAATGG 58.836 41.667 0.00 0.00 37.75 3.16
1872 9361 5.048083 GTCAGCATTCCTTGTTGTTAATGGA 60.048 40.000 0.00 0.00 37.75 3.41
1873 9362 5.716228 TCAGCATTCCTTGTTGTTAATGGAT 59.284 36.000 0.00 0.00 37.75 3.41
1874 9363 6.038356 CAGCATTCCTTGTTGTTAATGGATC 58.962 40.000 0.00 0.00 32.34 3.36
1875 9364 5.127682 AGCATTCCTTGTTGTTAATGGATCC 59.872 40.000 4.20 4.20 31.46 3.36
1876 9365 5.682212 GCATTCCTTGTTGTTAATGGATCCC 60.682 44.000 9.90 0.00 31.46 3.85
1877 9366 4.946160 TCCTTGTTGTTAATGGATCCCT 57.054 40.909 9.90 0.00 0.00 4.20
1878 9367 5.269554 TCCTTGTTGTTAATGGATCCCTT 57.730 39.130 9.90 8.54 0.00 3.95
1879 9368 5.016173 TCCTTGTTGTTAATGGATCCCTTG 58.984 41.667 9.90 0.00 0.00 3.61
1880 9369 4.381932 CCTTGTTGTTAATGGATCCCTTGC 60.382 45.833 9.90 4.45 0.00 4.01
1881 9370 3.772387 TGTTGTTAATGGATCCCTTGCA 58.228 40.909 9.90 6.99 0.00 4.08
1882 9371 4.155709 TGTTGTTAATGGATCCCTTGCAA 58.844 39.130 9.90 12.27 0.00 4.08
1883 9372 4.776837 TGTTGTTAATGGATCCCTTGCAAT 59.223 37.500 9.90 0.00 0.00 3.56
1884 9373 5.248020 TGTTGTTAATGGATCCCTTGCAATT 59.752 36.000 9.90 3.59 0.00 2.32
1885 9374 6.438741 TGTTGTTAATGGATCCCTTGCAATTA 59.561 34.615 9.90 2.56 0.00 1.40
1886 9375 7.038729 TGTTGTTAATGGATCCCTTGCAATTAA 60.039 33.333 9.90 8.74 0.00 1.40
1887 9376 7.673641 TGTTAATGGATCCCTTGCAATTAAT 57.326 32.000 9.90 0.00 0.00 1.40
1888 9377 7.499292 TGTTAATGGATCCCTTGCAATTAATG 58.501 34.615 9.90 0.00 0.00 1.90
1889 9378 5.556006 AATGGATCCCTTGCAATTAATGG 57.444 39.130 9.90 0.00 0.00 3.16
1890 9379 4.262891 TGGATCCCTTGCAATTAATGGA 57.737 40.909 9.90 1.92 0.00 3.41
1891 9380 3.960102 TGGATCCCTTGCAATTAATGGAC 59.040 43.478 9.90 0.00 29.04 4.02
1892 9381 4.218312 GGATCCCTTGCAATTAATGGACT 58.782 43.478 0.00 0.00 29.04 3.85
1893 9382 4.651045 GGATCCCTTGCAATTAATGGACTT 59.349 41.667 0.00 0.00 29.04 3.01
1894 9383 5.452356 GGATCCCTTGCAATTAATGGACTTG 60.452 44.000 0.00 0.00 29.04 3.16
1895 9384 4.671831 TCCCTTGCAATTAATGGACTTGA 58.328 39.130 0.00 0.00 0.00 3.02
1896 9385 4.706476 TCCCTTGCAATTAATGGACTTGAG 59.294 41.667 0.00 0.00 0.00 3.02
1897 9386 4.706476 CCCTTGCAATTAATGGACTTGAGA 59.294 41.667 0.00 0.00 0.00 3.27
1898 9387 5.185635 CCCTTGCAATTAATGGACTTGAGAA 59.814 40.000 0.00 0.00 0.00 2.87
1899 9388 6.295236 CCCTTGCAATTAATGGACTTGAGAAA 60.295 38.462 0.00 0.00 0.00 2.52
1900 9389 6.810182 CCTTGCAATTAATGGACTTGAGAAAG 59.190 38.462 0.00 0.00 0.00 2.62
1901 9390 7.309377 CCTTGCAATTAATGGACTTGAGAAAGA 60.309 37.037 0.00 0.00 0.00 2.52
1902 9391 7.523293 TGCAATTAATGGACTTGAGAAAGAA 57.477 32.000 0.00 0.00 0.00 2.52
1903 9392 8.125978 TGCAATTAATGGACTTGAGAAAGAAT 57.874 30.769 0.00 0.00 0.00 2.40
1904 9393 8.030692 TGCAATTAATGGACTTGAGAAAGAATG 58.969 33.333 0.00 0.00 0.00 2.67
1905 9394 8.246180 GCAATTAATGGACTTGAGAAAGAATGA 58.754 33.333 0.00 0.00 0.00 2.57
1906 9395 9.784680 CAATTAATGGACTTGAGAAAGAATGAG 57.215 33.333 0.00 0.00 0.00 2.90
1907 9396 7.928307 TTAATGGACTTGAGAAAGAATGAGG 57.072 36.000 0.00 0.00 0.00 3.86
1908 9397 5.768980 ATGGACTTGAGAAAGAATGAGGA 57.231 39.130 0.00 0.00 0.00 3.71
1909 9398 5.157940 TGGACTTGAGAAAGAATGAGGAG 57.842 43.478 0.00 0.00 0.00 3.69
1910 9399 4.594920 TGGACTTGAGAAAGAATGAGGAGT 59.405 41.667 0.00 0.00 0.00 3.85
1911 9400 5.072329 TGGACTTGAGAAAGAATGAGGAGTT 59.928 40.000 0.00 0.00 0.00 3.01
1912 9401 5.641636 GGACTTGAGAAAGAATGAGGAGTTC 59.358 44.000 0.00 0.00 0.00 3.01
1913 9402 6.432403 ACTTGAGAAAGAATGAGGAGTTCT 57.568 37.500 0.00 0.00 37.52 3.01
1914 9403 6.836242 ACTTGAGAAAGAATGAGGAGTTCTT 58.164 36.000 0.00 0.00 45.23 2.52
1915 9404 6.709846 ACTTGAGAAAGAATGAGGAGTTCTTG 59.290 38.462 2.27 0.00 43.19 3.02
1916 9405 6.425210 TGAGAAAGAATGAGGAGTTCTTGA 57.575 37.500 2.27 0.00 43.19 3.02
1917 9406 6.462500 TGAGAAAGAATGAGGAGTTCTTGAG 58.538 40.000 2.27 0.00 43.19 3.02
1918 9407 6.268617 TGAGAAAGAATGAGGAGTTCTTGAGA 59.731 38.462 2.27 0.00 43.19 3.27
1919 9408 7.072263 AGAAAGAATGAGGAGTTCTTGAGAA 57.928 36.000 2.27 0.00 43.19 2.87
1920 9409 7.512992 AGAAAGAATGAGGAGTTCTTGAGAAA 58.487 34.615 2.27 0.00 43.19 2.52
1921 9410 7.995488 AGAAAGAATGAGGAGTTCTTGAGAAAA 59.005 33.333 2.27 0.00 43.19 2.29
1922 9411 7.742556 AAGAATGAGGAGTTCTTGAGAAAAG 57.257 36.000 0.73 0.00 42.58 2.27
1923 9412 7.072263 AGAATGAGGAGTTCTTGAGAAAAGA 57.928 36.000 0.00 0.00 35.58 2.52
1924 9413 7.512992 AGAATGAGGAGTTCTTGAGAAAAGAA 58.487 34.615 0.00 0.00 35.58 2.52
1925 9414 7.995488 AGAATGAGGAGTTCTTGAGAAAAGAAA 59.005 33.333 2.27 0.00 37.93 2.52
1926 9415 6.927294 TGAGGAGTTCTTGAGAAAAGAAAC 57.073 37.500 2.27 1.30 37.93 2.78
1927 9416 5.523916 TGAGGAGTTCTTGAGAAAAGAAACG 59.476 40.000 2.27 0.00 37.93 3.60
1928 9417 5.671493 AGGAGTTCTTGAGAAAAGAAACGA 58.329 37.500 2.27 0.00 37.93 3.85
1929 9418 5.524281 AGGAGTTCTTGAGAAAAGAAACGAC 59.476 40.000 2.27 0.00 37.93 4.34
1930 9419 5.293569 GGAGTTCTTGAGAAAAGAAACGACA 59.706 40.000 2.27 0.00 37.93 4.35
1931 9420 6.017852 GGAGTTCTTGAGAAAAGAAACGACAT 60.018 38.462 2.27 0.00 37.93 3.06
1932 9421 6.949449 AGTTCTTGAGAAAAGAAACGACATC 58.051 36.000 2.27 0.00 37.93 3.06
1933 9422 5.576337 TCTTGAGAAAAGAAACGACATCG 57.424 39.130 0.00 0.00 46.33 3.84
1934 9423 6.509677 GTTCTTGAGAAAAGAAACGACATCGT 60.510 38.462 0.00 0.00 44.62 3.73
1935 9424 8.445004 GTTCTTGAGAAAAGAAACGACATCGTG 61.445 40.741 7.84 0.00 43.12 4.35
1948 9437 5.006649 CGACATCGTGAGTAAATTATGCC 57.993 43.478 0.00 0.00 34.11 4.40
1949 9438 4.745125 CGACATCGTGAGTAAATTATGCCT 59.255 41.667 0.00 0.00 34.11 4.75
1950 9439 5.107837 CGACATCGTGAGTAAATTATGCCTC 60.108 44.000 0.00 0.00 34.11 4.70
1951 9440 5.670485 ACATCGTGAGTAAATTATGCCTCA 58.330 37.500 0.00 0.00 0.00 3.86
1952 9441 5.523916 ACATCGTGAGTAAATTATGCCTCAC 59.476 40.000 10.45 10.45 46.49 3.51
1955 9444 5.796350 GTGAGTAAATTATGCCTCACGTT 57.204 39.130 6.52 0.00 42.89 3.99
1956 9445 6.178239 GTGAGTAAATTATGCCTCACGTTT 57.822 37.500 6.52 0.00 42.89 3.60
1957 9446 6.608610 GTGAGTAAATTATGCCTCACGTTTT 58.391 36.000 6.52 0.00 42.89 2.43
1958 9447 6.523201 GTGAGTAAATTATGCCTCACGTTTTG 59.477 38.462 6.52 0.00 42.89 2.44
1959 9448 5.949735 AGTAAATTATGCCTCACGTTTTGG 58.050 37.500 0.00 0.00 0.00 3.28
1960 9449 2.939460 ATTATGCCTCACGTTTTGGC 57.061 45.000 14.21 14.21 46.26 4.52
1961 9450 1.904287 TTATGCCTCACGTTTTGGCT 58.096 45.000 19.61 10.66 46.23 4.75
1962 9451 1.164411 TATGCCTCACGTTTTGGCTG 58.836 50.000 19.61 0.00 46.23 4.85
1963 9452 0.823356 ATGCCTCACGTTTTGGCTGT 60.823 50.000 19.61 9.25 46.23 4.40
1964 9453 1.034838 TGCCTCACGTTTTGGCTGTT 61.035 50.000 19.61 0.00 46.23 3.16
1965 9454 0.594796 GCCTCACGTTTTGGCTGTTG 60.595 55.000 13.92 0.00 43.05 3.33
1966 9455 0.030638 CCTCACGTTTTGGCTGTTGG 59.969 55.000 0.00 0.00 0.00 3.77
1967 9456 1.021202 CTCACGTTTTGGCTGTTGGA 58.979 50.000 0.00 0.00 0.00 3.53
1968 9457 1.608590 CTCACGTTTTGGCTGTTGGAT 59.391 47.619 0.00 0.00 0.00 3.41
1969 9458 1.606668 TCACGTTTTGGCTGTTGGATC 59.393 47.619 0.00 0.00 0.00 3.36
1970 9459 0.958822 ACGTTTTGGCTGTTGGATCC 59.041 50.000 4.20 4.20 0.00 3.36
1971 9460 1.247567 CGTTTTGGCTGTTGGATCCT 58.752 50.000 14.23 0.00 0.00 3.24
1972 9461 1.068333 CGTTTTGGCTGTTGGATCCTG 60.068 52.381 14.23 1.92 0.00 3.86
1973 9462 2.238521 GTTTTGGCTGTTGGATCCTGA 58.761 47.619 14.23 0.00 0.00 3.86
1974 9463 2.627699 GTTTTGGCTGTTGGATCCTGAA 59.372 45.455 14.23 0.00 0.00 3.02
1975 9464 2.673775 TTGGCTGTTGGATCCTGAAA 57.326 45.000 14.23 0.00 0.00 2.69
1976 9465 2.905415 TGGCTGTTGGATCCTGAAAT 57.095 45.000 14.23 0.00 0.00 2.17
1977 9466 2.726821 TGGCTGTTGGATCCTGAAATC 58.273 47.619 14.23 0.00 0.00 2.17
1978 9467 2.309755 TGGCTGTTGGATCCTGAAATCT 59.690 45.455 14.23 0.00 0.00 2.40
1979 9468 2.686915 GGCTGTTGGATCCTGAAATCTG 59.313 50.000 14.23 0.00 0.00 2.90
1980 9469 3.614092 GCTGTTGGATCCTGAAATCTGA 58.386 45.455 14.23 0.00 0.00 3.27
1981 9470 4.012374 GCTGTTGGATCCTGAAATCTGAA 58.988 43.478 14.23 0.00 0.00 3.02
1982 9471 4.643784 GCTGTTGGATCCTGAAATCTGAAT 59.356 41.667 14.23 0.00 0.00 2.57
1983 9472 5.221009 GCTGTTGGATCCTGAAATCTGAATC 60.221 44.000 14.23 0.00 0.00 2.52
1984 9473 4.877823 TGTTGGATCCTGAAATCTGAATCG 59.122 41.667 14.23 0.00 0.00 3.34
1985 9474 5.118990 GTTGGATCCTGAAATCTGAATCGA 58.881 41.667 14.23 0.00 0.00 3.59
1986 9475 4.953667 TGGATCCTGAAATCTGAATCGAG 58.046 43.478 14.23 0.00 0.00 4.04
1987 9476 4.202295 TGGATCCTGAAATCTGAATCGAGG 60.202 45.833 14.23 0.00 0.00 4.63
1988 9477 4.039730 GGATCCTGAAATCTGAATCGAGGA 59.960 45.833 3.84 0.00 31.83 3.71
1989 9478 4.662468 TCCTGAAATCTGAATCGAGGAG 57.338 45.455 0.00 0.00 0.00 3.69
1990 9479 3.129871 CCTGAAATCTGAATCGAGGAGC 58.870 50.000 0.00 0.00 0.00 4.70
1991 9480 3.431346 CCTGAAATCTGAATCGAGGAGCA 60.431 47.826 0.00 0.00 0.00 4.26
1992 9481 3.790091 TGAAATCTGAATCGAGGAGCAG 58.210 45.455 0.00 0.00 0.00 4.24
1993 9482 2.906691 AATCTGAATCGAGGAGCAGG 57.093 50.000 0.00 0.00 0.00 4.85
1994 9483 0.392336 ATCTGAATCGAGGAGCAGGC 59.608 55.000 0.00 0.00 0.00 4.85
1995 9484 0.685785 TCTGAATCGAGGAGCAGGCT 60.686 55.000 0.00 0.00 0.00 4.58
1996 9485 0.530211 CTGAATCGAGGAGCAGGCTG 60.530 60.000 10.94 10.94 0.00 4.85
1997 9486 1.886777 GAATCGAGGAGCAGGCTGC 60.887 63.158 31.56 31.56 45.46 5.25
2015 9504 2.582436 GGGGACGCCGAATCTTCA 59.418 61.111 0.00 0.00 0.00 3.02
2016 9505 1.146263 GGGGACGCCGAATCTTCAT 59.854 57.895 0.00 0.00 0.00 2.57
2017 9506 0.880718 GGGGACGCCGAATCTTCATC 60.881 60.000 0.00 0.00 0.00 2.92
2018 9507 1.215655 GGGACGCCGAATCTTCATCG 61.216 60.000 0.00 0.00 39.92 3.84
2019 9508 0.248907 GGACGCCGAATCTTCATCGA 60.249 55.000 0.00 0.00 42.76 3.59
2020 9509 1.556564 GACGCCGAATCTTCATCGAA 58.443 50.000 0.00 0.00 42.76 3.71
2021 9510 2.128035 GACGCCGAATCTTCATCGAAT 58.872 47.619 0.00 0.00 42.76 3.34
2022 9511 2.128035 ACGCCGAATCTTCATCGAATC 58.872 47.619 0.00 0.00 42.76 2.52
2023 9512 1.123217 CGCCGAATCTTCATCGAATCG 59.877 52.381 0.00 0.00 42.76 3.34
2024 9513 2.128035 GCCGAATCTTCATCGAATCGT 58.872 47.619 1.52 0.00 42.76 3.73
2025 9514 3.305964 GCCGAATCTTCATCGAATCGTA 58.694 45.455 1.52 0.00 42.76 3.43
2026 9515 3.119792 GCCGAATCTTCATCGAATCGTAC 59.880 47.826 1.52 0.00 42.76 3.67
2027 9516 3.669122 CCGAATCTTCATCGAATCGTACC 59.331 47.826 1.52 0.00 42.76 3.34
2028 9517 3.358115 CGAATCTTCATCGAATCGTACCG 59.642 47.826 1.52 0.00 42.76 4.02
2029 9518 4.534168 GAATCTTCATCGAATCGTACCGA 58.466 43.478 1.52 0.00 41.13 4.69
2030 9519 4.563337 ATCTTCATCGAATCGTACCGAA 57.437 40.909 1.52 1.15 39.99 4.30
2031 9520 4.563337 TCTTCATCGAATCGTACCGAAT 57.437 40.909 1.52 0.00 39.99 3.34
2032 9521 4.534168 TCTTCATCGAATCGTACCGAATC 58.466 43.478 1.52 0.00 39.99 2.52
2033 9522 3.278367 TCATCGAATCGTACCGAATCC 57.722 47.619 1.52 0.00 39.99 3.01
2034 9523 1.976728 CATCGAATCGTACCGAATCCG 59.023 52.381 1.52 0.00 39.99 4.18
2035 9524 1.298602 TCGAATCGTACCGAATCCGA 58.701 50.000 1.52 0.00 39.99 4.55
2036 9525 1.003545 TCGAATCGTACCGAATCCGAC 60.004 52.381 1.52 0.00 39.99 4.79
2037 9526 1.763634 GAATCGTACCGAATCCGACC 58.236 55.000 0.00 0.00 39.99 4.79
2038 9527 1.336125 GAATCGTACCGAATCCGACCT 59.664 52.381 0.00 0.00 39.99 3.85
2039 9528 0.950116 ATCGTACCGAATCCGACCTC 59.050 55.000 0.00 0.00 39.99 3.85
2040 9529 1.010350 CGTACCGAATCCGACCTCG 60.010 63.158 0.00 0.00 38.22 4.63
2041 9530 1.709147 CGTACCGAATCCGACCTCGT 61.709 60.000 0.00 0.00 38.22 4.18
2042 9531 0.453390 GTACCGAATCCGACCTCGTT 59.547 55.000 0.00 0.00 38.22 3.85
2043 9532 0.734889 TACCGAATCCGACCTCGTTC 59.265 55.000 0.00 0.00 38.22 3.95
2044 9533 1.226888 CCGAATCCGACCTCGTTCC 60.227 63.158 0.00 0.00 38.22 3.62
2045 9534 1.226888 CGAATCCGACCTCGTTCCC 60.227 63.158 0.00 0.00 38.22 3.97
2046 9535 1.226888 GAATCCGACCTCGTTCCCG 60.227 63.158 0.00 0.00 37.74 5.14
2047 9536 1.660560 GAATCCGACCTCGTTCCCGA 61.661 60.000 0.00 0.00 41.73 5.14
2048 9537 1.252904 AATCCGACCTCGTTCCCGAA 61.253 55.000 0.00 0.00 43.69 4.30
2049 9538 1.041447 ATCCGACCTCGTTCCCGAAT 61.041 55.000 0.00 0.00 43.69 3.34
2050 9539 1.226888 CCGACCTCGTTCCCGAATC 60.227 63.158 0.00 0.00 43.69 2.52
2051 9540 1.226888 CGACCTCGTTCCCGAATCC 60.227 63.158 0.00 0.00 43.69 3.01
2052 9541 1.226888 GACCTCGTTCCCGAATCCG 60.227 63.158 0.00 0.00 43.69 4.18
2053 9542 1.660560 GACCTCGTTCCCGAATCCGA 61.661 60.000 0.00 0.00 43.69 4.55
2054 9543 1.041447 ACCTCGTTCCCGAATCCGAT 61.041 55.000 0.00 0.00 43.69 4.18
2055 9544 0.104304 CCTCGTTCCCGAATCCGATT 59.896 55.000 0.00 0.00 43.69 3.34
2056 9545 1.488527 CTCGTTCCCGAATCCGATTC 58.511 55.000 10.64 10.64 43.69 2.52
2057 9546 0.103572 TCGTTCCCGAATCCGATTCC 59.896 55.000 14.28 0.92 40.86 3.01
2058 9547 1.213094 CGTTCCCGAATCCGATTCCG 61.213 60.000 14.28 8.61 38.22 4.30
2069 9558 3.588277 CGATTCCGGGTCGATGAAT 57.412 52.632 20.80 3.31 41.40 2.57
2070 9559 1.419374 CGATTCCGGGTCGATGAATC 58.581 55.000 20.80 11.06 41.40 2.52
2089 9578 2.203451 GGATCGAGGGACGGCCTA 60.203 66.667 7.57 0.00 42.82 3.93
2090 9579 2.562876 GGATCGAGGGACGGCCTAC 61.563 68.421 7.57 0.00 42.82 3.18
2091 9580 2.521224 ATCGAGGGACGGCCTACC 60.521 66.667 7.57 3.54 42.82 3.18
2101 9590 3.709633 GGCCTACCGTTCCCCGTT 61.710 66.667 0.00 0.00 33.66 4.44
2102 9591 2.348620 GCCTACCGTTCCCCGTTT 59.651 61.111 0.00 0.00 33.66 3.60
2103 9592 1.742880 GCCTACCGTTCCCCGTTTC 60.743 63.158 0.00 0.00 33.66 2.78
2104 9593 1.078918 CCTACCGTTCCCCGTTTCC 60.079 63.158 0.00 0.00 33.66 3.13
2105 9594 1.446618 CTACCGTTCCCCGTTTCCG 60.447 63.158 0.00 0.00 33.66 4.30
2117 9606 2.304751 CGTTTCCGGCTACTATGGTT 57.695 50.000 0.00 0.00 0.00 3.67
2142 9631 2.056359 TCCTTTCGGGGTTTAACCTCA 58.944 47.619 14.96 0.00 39.25 3.86
2147 9636 0.107848 CGGGGTTTAACCTCAGCGAT 60.108 55.000 14.96 0.00 39.25 4.58
2177 9666 3.302347 CTCCTGGCTCGTCGGCTTT 62.302 63.158 5.82 0.00 39.32 3.51
2343 9832 1.333177 GGACGTGCTCCTCAGGATAT 58.667 55.000 0.00 0.00 35.89 1.63
2393 9882 1.389609 CCATGGGAGCCATCAAGTGC 61.390 60.000 2.85 0.00 43.15 4.40
2418 9907 0.754217 AGTGGTAAGCTATCGCCCGA 60.754 55.000 0.00 0.00 36.60 5.14
2435 9929 4.142687 CGCCCGACTAATTGTTTTCATTCT 60.143 41.667 0.00 0.00 0.00 2.40
2436 9930 5.064198 CGCCCGACTAATTGTTTTCATTCTA 59.936 40.000 0.00 0.00 0.00 2.10
2554 10176 1.406069 CGGAGTTGATGAGGAACCCAG 60.406 57.143 0.00 0.00 0.00 4.45
2585 10208 1.961793 AAAGCACAAGCCGAAGTACA 58.038 45.000 0.00 0.00 43.56 2.90
2674 10297 0.534412 CATCAAGGAGACGCTCAGGT 59.466 55.000 8.71 0.00 31.08 4.00
2727 10350 3.281240 CCCACTGAGGCATGCAAC 58.719 61.111 21.36 12.96 35.39 4.17
2867 10490 2.693074 GCAAAGTGGACTTCAAGGGAAA 59.307 45.455 0.00 0.00 34.61 3.13
3071 10694 2.309528 TACCTGCATGCTAAAGTCCG 57.690 50.000 20.33 0.00 0.00 4.79
3105 10728 1.449246 GCGCCTGCTTCAGATGTCT 60.449 57.895 0.00 0.00 38.39 3.41
3106 10729 0.179100 GCGCCTGCTTCAGATGTCTA 60.179 55.000 0.00 0.00 38.39 2.59
3219 10851 7.715249 GTGTCATGGTGGTAATCATAGTAATGT 59.285 37.037 0.00 0.00 34.50 2.71
3297 10930 8.884124 TTGATTATCAAATATTCCCTCCATCC 57.116 34.615 5.03 0.00 32.71 3.51
3298 10931 7.413446 TGATTATCAAATATTCCCTCCATCCC 58.587 38.462 0.00 0.00 0.00 3.85
3299 10932 6.795192 TTATCAAATATTCCCTCCATCCCA 57.205 37.500 0.00 0.00 0.00 4.37
3300 10933 5.684853 ATCAAATATTCCCTCCATCCCAA 57.315 39.130 0.00 0.00 0.00 4.12
3301 10934 5.684853 TCAAATATTCCCTCCATCCCAAT 57.315 39.130 0.00 0.00 0.00 3.16
3302 10935 6.795192 TCAAATATTCCCTCCATCCCAATA 57.205 37.500 0.00 0.00 0.00 1.90
3303 10936 7.361004 TCAAATATTCCCTCCATCCCAATAT 57.639 36.000 0.00 0.00 0.00 1.28
3304 10937 8.475445 TCAAATATTCCCTCCATCCCAATATA 57.525 34.615 0.00 0.00 0.00 0.86
3305 10938 8.910188 TCAAATATTCCCTCCATCCCAATATAA 58.090 33.333 0.00 0.00 0.00 0.98
3306 10939 9.193806 CAAATATTCCCTCCATCCCAATATAAG 57.806 37.037 0.00 0.00 0.00 1.73
3307 10940 8.482378 AATATTCCCTCCATCCCAATATAAGT 57.518 34.615 0.00 0.00 0.00 2.24
3308 10941 5.582950 TTCCCTCCATCCCAATATAAGTG 57.417 43.478 0.00 0.00 0.00 3.16
3309 10942 4.577096 TCCCTCCATCCCAATATAAGTGT 58.423 43.478 0.00 0.00 0.00 3.55
3310 10943 4.597507 TCCCTCCATCCCAATATAAGTGTC 59.402 45.833 0.00 0.00 0.00 3.67
3311 10944 4.599241 CCCTCCATCCCAATATAAGTGTCT 59.401 45.833 0.00 0.00 0.00 3.41
3312 10945 5.073691 CCCTCCATCCCAATATAAGTGTCTT 59.926 44.000 0.00 0.00 0.00 3.01
3313 10946 6.272324 CCCTCCATCCCAATATAAGTGTCTTA 59.728 42.308 0.00 0.00 0.00 2.10
3314 10947 7.202186 CCCTCCATCCCAATATAAGTGTCTTAA 60.202 40.741 0.00 0.00 0.00 1.85
3315 10948 7.661847 CCTCCATCCCAATATAAGTGTCTTAAC 59.338 40.741 0.00 0.00 0.00 2.01
3316 10949 8.331931 TCCATCCCAATATAAGTGTCTTAACT 57.668 34.615 0.00 0.00 0.00 2.24
3317 10950 8.778059 TCCATCCCAATATAAGTGTCTTAACTT 58.222 33.333 0.00 0.00 42.89 2.66
3318 10951 9.408648 CCATCCCAATATAAGTGTCTTAACTTT 57.591 33.333 0.00 0.00 40.77 2.66
3320 10953 9.975218 ATCCCAATATAAGTGTCTTAACTTTGT 57.025 29.630 0.00 0.00 40.77 2.83
3328 10961 9.857957 ATAAGTGTCTTAACTTTGTACTAGCTC 57.142 33.333 0.00 0.00 40.77 4.09
3329 10962 7.527568 AGTGTCTTAACTTTGTACTAGCTCT 57.472 36.000 0.00 0.00 0.00 4.09
3330 10963 8.632906 AGTGTCTTAACTTTGTACTAGCTCTA 57.367 34.615 0.00 0.00 0.00 2.43
3331 10964 8.732531 AGTGTCTTAACTTTGTACTAGCTCTAG 58.267 37.037 0.00 2.55 39.04 2.43
3333 10966 9.730705 TGTCTTAACTTTGTACTAGCTCTAGTA 57.269 33.333 11.59 11.59 43.98 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.762535 GCCACAGCCACTAGTAGAAA 57.237 50.000 3.59 0.00 0.00 2.52
15 16 2.047274 CGTACCACCAGGCCACAG 60.047 66.667 5.01 0.00 39.06 3.66
16 17 2.845317 ACGTACCACCAGGCCACA 60.845 61.111 5.01 0.00 39.06 4.17
18 19 2.845317 ACACGTACCACCAGGCCA 60.845 61.111 5.01 0.00 39.06 5.36
19 20 2.047560 GACACGTACCACCAGGCC 60.048 66.667 0.00 0.00 39.06 5.19
20 21 1.374252 CAGACACGTACCACCAGGC 60.374 63.158 0.00 0.00 39.06 4.85
24 25 2.027625 GCAGCAGACACGTACCACC 61.028 63.158 0.00 0.00 0.00 4.61
25 26 1.006102 AGCAGCAGACACGTACCAC 60.006 57.895 0.00 0.00 0.00 4.16
27 28 2.383527 GCAGCAGCAGACACGTACC 61.384 63.158 0.00 0.00 41.58 3.34
28 29 2.383527 GGCAGCAGCAGACACGTAC 61.384 63.158 2.65 0.00 44.61 3.67
29 30 2.048222 GGCAGCAGCAGACACGTA 60.048 61.111 2.65 0.00 44.61 3.57
31 32 4.694233 AGGGCAGCAGCAGACACG 62.694 66.667 2.65 0.00 44.61 4.49
33 34 4.383861 CGAGGGCAGCAGCAGACA 62.384 66.667 2.65 0.00 44.61 3.41
35 36 2.793160 CTTTCGAGGGCAGCAGCAGA 62.793 60.000 2.65 0.00 44.61 4.26
36 37 2.359107 TTTCGAGGGCAGCAGCAG 60.359 61.111 2.65 0.00 44.61 4.24
37 38 2.359107 CTTTCGAGGGCAGCAGCA 60.359 61.111 2.65 0.00 44.61 4.41
38 39 3.130160 CCTTTCGAGGGCAGCAGC 61.130 66.667 0.00 0.00 41.10 5.25
39 40 2.437359 CCCTTTCGAGGGCAGCAG 60.437 66.667 0.00 0.00 42.99 4.24
46 47 3.901797 AACCAGCGCCCTTTCGAGG 62.902 63.158 2.29 0.00 34.05 4.63
47 48 2.358737 AACCAGCGCCCTTTCGAG 60.359 61.111 2.29 0.00 0.00 4.04
48 49 2.358247 GAACCAGCGCCCTTTCGA 60.358 61.111 2.29 0.00 0.00 3.71
49 50 3.788766 CGAACCAGCGCCCTTTCG 61.789 66.667 17.10 17.10 35.36 3.46
50 51 2.358247 TCGAACCAGCGCCCTTTC 60.358 61.111 2.29 2.79 0.00 2.62
51 52 2.358737 CTCGAACCAGCGCCCTTT 60.359 61.111 2.29 0.00 0.00 3.11
52 53 3.591254 GACTCGAACCAGCGCCCTT 62.591 63.158 2.29 0.00 0.00 3.95
57 58 4.421479 AGCGGACTCGAACCAGCG 62.421 66.667 8.65 0.00 39.00 5.18
58 59 2.507324 GAGCGGACTCGAACCAGC 60.507 66.667 8.65 11.13 39.00 4.85
66 67 0.944386 TTGTGCAAAAGAGCGGACTC 59.056 50.000 0.00 0.00 43.82 3.36
68 69 0.663153 AGTTGTGCAAAAGAGCGGAC 59.337 50.000 0.00 0.00 37.31 4.79
69 70 1.388547 AAGTTGTGCAAAAGAGCGGA 58.611 45.000 0.00 0.00 37.31 5.54
509 3630 6.203338 GTCACGGAAAGTAGTATTGGTGAAAA 59.797 38.462 0.00 0.00 35.25 2.29
512 3633 4.281435 TGTCACGGAAAGTAGTATTGGTGA 59.719 41.667 0.00 0.00 0.00 4.02
515 3636 4.092968 GCTTGTCACGGAAAGTAGTATTGG 59.907 45.833 0.00 0.00 0.00 3.16
521 3642 5.178623 TGTTAATGCTTGTCACGGAAAGTAG 59.821 40.000 0.00 0.00 0.00 2.57
524 3645 4.481930 TGTTAATGCTTGTCACGGAAAG 57.518 40.909 0.00 0.00 0.00 2.62
528 3649 4.981674 ACAAAATGTTAATGCTTGTCACGG 59.018 37.500 0.00 0.00 0.00 4.94
589 3710 6.531021 TCCGTCCTGATTTATTAATCCCTTC 58.469 40.000 2.18 0.00 39.56 3.46
597 3718 6.795144 TTGTACCTCCGTCCTGATTTATTA 57.205 37.500 0.00 0.00 0.00 0.98
610 3731 3.028850 TGGAAGTAGGATTGTACCTCCG 58.971 50.000 6.06 0.00 36.61 4.63
618 3739 5.602978 ACTACCCATAGTGGAAGTAGGATTG 59.397 44.000 13.41 0.00 40.96 2.67
619 3740 5.789535 ACTACCCATAGTGGAAGTAGGATT 58.210 41.667 13.41 0.00 40.96 3.01
622 3743 4.805744 AGACTACCCATAGTGGAAGTAGG 58.194 47.826 13.41 0.00 41.98 3.18
672 3793 3.904571 TGTTCATCCACACACTACGTAC 58.095 45.455 0.00 0.00 0.00 3.67
712 3833 3.104512 TCCCTACAAGATCGTGATGGTT 58.895 45.455 15.90 0.00 0.00 3.67
725 3846 1.120530 GGAGCGGAGATTCCCTACAA 58.879 55.000 0.00 0.00 31.13 2.41
746 3867 1.134560 GATTCCCTACACGACTCGCTT 59.865 52.381 0.00 0.00 0.00 4.68
749 3870 1.334243 GGAGATTCCCTACACGACTCG 59.666 57.143 0.00 0.00 0.00 4.18
750 3871 1.334243 CGGAGATTCCCTACACGACTC 59.666 57.143 0.00 0.00 31.13 3.36
751 3872 1.390565 CGGAGATTCCCTACACGACT 58.609 55.000 0.00 0.00 31.13 4.18
752 3873 0.248949 GCGGAGATTCCCTACACGAC 60.249 60.000 0.00 0.00 31.13 4.34
753 3874 0.395311 AGCGGAGATTCCCTACACGA 60.395 55.000 0.00 0.00 31.13 4.35
754 3875 0.030908 GAGCGGAGATTCCCTACACG 59.969 60.000 0.00 0.00 31.13 4.49
755 3876 0.389757 GGAGCGGAGATTCCCTACAC 59.610 60.000 0.00 0.00 31.13 2.90
756 3877 0.759436 GGGAGCGGAGATTCCCTACA 60.759 60.000 2.31 0.00 45.65 2.74
757 3878 2.051105 GGGAGCGGAGATTCCCTAC 58.949 63.158 2.31 0.00 45.65 3.18
758 3879 4.621269 GGGAGCGGAGATTCCCTA 57.379 61.111 2.31 0.00 45.65 3.53
761 3882 1.668867 GCTAGGGAGCGGAGATTCC 59.331 63.158 0.00 0.00 39.39 3.01
775 3896 4.152045 CCAAGGATACGTACTACTCGCTAG 59.848 50.000 0.00 0.00 46.39 3.42
870 4033 3.915010 GCTATGCGAGCGAGACAG 58.085 61.111 0.00 0.00 42.62 3.51
906 4069 5.512576 GGCACGGACCAAAGGAATATACTAT 60.513 44.000 0.00 0.00 0.00 2.12
910 4082 3.202829 GGCACGGACCAAAGGAATATA 57.797 47.619 0.00 0.00 0.00 0.86
912 4084 3.562397 GGCACGGACCAAAGGAATA 57.438 52.632 0.00 0.00 0.00 1.75
943 4136 2.565841 GCTGGGGATAAACTGCACTAG 58.434 52.381 0.00 0.00 0.00 2.57
975 4169 3.181506 CGCCTGTTATTTTCTTGAGCTCC 60.182 47.826 12.15 0.00 0.00 4.70
1483 8963 0.882042 CTAGCTGAAATGGCGGCGAT 60.882 55.000 12.98 0.00 44.79 4.58
1508 8997 1.734477 CTGACGTTGACAGGCTCGG 60.734 63.158 0.00 0.00 0.00 4.63
1515 9004 2.729491 CGCTCGCTGACGTTGACA 60.729 61.111 0.00 0.00 41.18 3.58
1563 9052 4.155733 TTCCCGATCATGGCGCGT 62.156 61.111 8.43 0.00 0.00 6.01
1579 9068 1.528309 CCCGCCTGTTGAACCTGTT 60.528 57.895 0.00 0.00 0.00 3.16
1629 9118 5.527214 CGGAAACATGGCAACTATGATCTTA 59.473 40.000 0.00 0.00 37.61 2.10
1630 9119 4.336433 CGGAAACATGGCAACTATGATCTT 59.664 41.667 0.00 0.00 37.61 2.40
1631 9120 3.879295 CGGAAACATGGCAACTATGATCT 59.121 43.478 0.00 0.00 37.61 2.75
1632 9121 3.003689 CCGGAAACATGGCAACTATGATC 59.996 47.826 0.00 0.00 37.61 2.92
1633 9122 2.951642 CCGGAAACATGGCAACTATGAT 59.048 45.455 0.00 0.00 37.61 2.45
1634 9123 2.290641 ACCGGAAACATGGCAACTATGA 60.291 45.455 9.46 0.00 37.61 2.15
1635 9124 2.091541 ACCGGAAACATGGCAACTATG 58.908 47.619 9.46 0.00 37.61 2.23
1636 9125 2.507407 ACCGGAAACATGGCAACTAT 57.493 45.000 9.46 0.00 37.61 2.12
1637 9126 2.702261 GTACCGGAAACATGGCAACTA 58.298 47.619 9.46 0.00 37.61 2.24
1638 9127 1.530323 GTACCGGAAACATGGCAACT 58.470 50.000 9.46 0.00 37.61 3.16
1639 9128 0.167251 CGTACCGGAAACATGGCAAC 59.833 55.000 9.46 0.00 0.00 4.17
1640 9129 2.545875 CGTACCGGAAACATGGCAA 58.454 52.632 9.46 0.00 0.00 4.52
1641 9130 4.287580 CGTACCGGAAACATGGCA 57.712 55.556 9.46 0.00 0.00 4.92
1652 9141 2.125673 CTTGCTCCCACCGTACCG 60.126 66.667 0.00 0.00 0.00 4.02
1653 9142 1.833787 TTCCTTGCTCCCACCGTACC 61.834 60.000 0.00 0.00 0.00 3.34
1654 9143 0.672711 GTTCCTTGCTCCCACCGTAC 60.673 60.000 0.00 0.00 0.00 3.67
1655 9144 1.675219 GTTCCTTGCTCCCACCGTA 59.325 57.895 0.00 0.00 0.00 4.02
1656 9145 2.430367 GTTCCTTGCTCCCACCGT 59.570 61.111 0.00 0.00 0.00 4.83
1657 9146 2.742372 CGTTCCTTGCTCCCACCG 60.742 66.667 0.00 0.00 0.00 4.94
1658 9147 2.359975 CCGTTCCTTGCTCCCACC 60.360 66.667 0.00 0.00 0.00 4.61
1659 9148 2.359975 CCCGTTCCTTGCTCCCAC 60.360 66.667 0.00 0.00 0.00 4.61
1660 9149 2.150719 TTCCCGTTCCTTGCTCCCA 61.151 57.895 0.00 0.00 0.00 4.37
1661 9150 1.674651 GTTCCCGTTCCTTGCTCCC 60.675 63.158 0.00 0.00 0.00 4.30
1662 9151 2.033194 CGTTCCCGTTCCTTGCTCC 61.033 63.158 0.00 0.00 0.00 4.70
1663 9152 1.005394 TCGTTCCCGTTCCTTGCTC 60.005 57.895 0.00 0.00 35.01 4.26
1664 9153 1.004918 CTCGTTCCCGTTCCTTGCT 60.005 57.895 0.00 0.00 35.01 3.91
1665 9154 2.033194 CCTCGTTCCCGTTCCTTGC 61.033 63.158 0.00 0.00 35.01 4.01
1666 9155 1.375523 CCCTCGTTCCCGTTCCTTG 60.376 63.158 0.00 0.00 35.01 3.61
1667 9156 1.534717 TCCCTCGTTCCCGTTCCTT 60.535 57.895 0.00 0.00 35.01 3.36
1668 9157 2.118951 TCCCTCGTTCCCGTTCCT 59.881 61.111 0.00 0.00 35.01 3.36
1669 9158 2.263852 GTCCCTCGTTCCCGTTCC 59.736 66.667 0.00 0.00 35.01 3.62
1670 9159 2.126189 CGTCCCTCGTTCCCGTTC 60.126 66.667 0.00 0.00 35.01 3.95
1671 9160 2.598394 TCGTCCCTCGTTCCCGTT 60.598 61.111 0.00 0.00 40.80 4.44
1672 9161 3.060615 CTCGTCCCTCGTTCCCGT 61.061 66.667 0.00 0.00 40.80 5.28
1673 9162 2.749044 TCTCGTCCCTCGTTCCCG 60.749 66.667 0.00 0.00 40.80 5.14
1674 9163 1.655885 GACTCTCGTCCCTCGTTCCC 61.656 65.000 0.00 0.00 40.80 3.97
1675 9164 1.801983 GACTCTCGTCCCTCGTTCC 59.198 63.158 0.00 0.00 40.80 3.62
1676 9165 1.424635 CGACTCTCGTCCCTCGTTC 59.575 63.158 0.00 0.00 40.80 3.95
1677 9166 2.039405 CCGACTCTCGTCCCTCGTT 61.039 63.158 0.00 0.00 38.40 3.85
1678 9167 2.436292 CCGACTCTCGTCCCTCGT 60.436 66.667 0.00 0.00 38.40 4.18
1679 9168 2.436292 ACCGACTCTCGTCCCTCG 60.436 66.667 0.00 0.00 38.40 4.63
1680 9169 2.408241 CCACCGACTCTCGTCCCTC 61.408 68.421 0.00 0.00 38.40 4.30
1681 9170 2.361357 CCACCGACTCTCGTCCCT 60.361 66.667 0.00 0.00 38.40 4.20
1682 9171 4.131088 GCCACCGACTCTCGTCCC 62.131 72.222 0.00 0.00 38.40 4.46
1683 9172 3.063084 AGCCACCGACTCTCGTCC 61.063 66.667 0.00 0.00 38.40 4.79
1684 9173 1.863662 TTCAGCCACCGACTCTCGTC 61.864 60.000 0.00 0.00 38.40 4.20
1685 9174 1.461091 TTTCAGCCACCGACTCTCGT 61.461 55.000 0.00 0.00 38.40 4.18
1686 9175 0.319555 TTTTCAGCCACCGACTCTCG 60.320 55.000 0.00 0.00 40.07 4.04
1687 9176 1.878953 TTTTTCAGCCACCGACTCTC 58.121 50.000 0.00 0.00 0.00 3.20
1704 9193 4.645863 ACCCTCGTTGTACCCTATTTTT 57.354 40.909 0.00 0.00 0.00 1.94
1705 9194 5.963214 ATACCCTCGTTGTACCCTATTTT 57.037 39.130 0.00 0.00 0.00 1.82
1706 9195 5.898972 TGTATACCCTCGTTGTACCCTATTT 59.101 40.000 0.00 0.00 0.00 1.40
1707 9196 5.457686 TGTATACCCTCGTTGTACCCTATT 58.542 41.667 0.00 0.00 0.00 1.73
1708 9197 5.065613 TGTATACCCTCGTTGTACCCTAT 57.934 43.478 0.00 0.00 0.00 2.57
1709 9198 4.518278 TGTATACCCTCGTTGTACCCTA 57.482 45.455 0.00 0.00 0.00 3.53
1710 9199 3.386932 TGTATACCCTCGTTGTACCCT 57.613 47.619 0.00 0.00 0.00 4.34
1711 9200 3.893813 AGATGTATACCCTCGTTGTACCC 59.106 47.826 0.00 0.00 0.00 3.69
1712 9201 4.826183 AGAGATGTATACCCTCGTTGTACC 59.174 45.833 13.43 0.00 32.52 3.34
1713 9202 6.388435 AAGAGATGTATACCCTCGTTGTAC 57.612 41.667 13.43 0.00 32.52 2.90
1714 9203 7.443575 GTCTAAGAGATGTATACCCTCGTTGTA 59.556 40.741 13.08 6.87 32.52 2.41
1715 9204 6.262720 GTCTAAGAGATGTATACCCTCGTTGT 59.737 42.308 13.08 6.32 32.52 3.32
1716 9205 6.566187 CGTCTAAGAGATGTATACCCTCGTTG 60.566 46.154 13.08 11.77 32.52 4.10
1717 9206 5.469421 CGTCTAAGAGATGTATACCCTCGTT 59.531 44.000 13.08 11.11 32.52 3.85
1718 9207 4.996122 CGTCTAAGAGATGTATACCCTCGT 59.004 45.833 13.43 13.04 32.52 4.18
1719 9208 5.236282 TCGTCTAAGAGATGTATACCCTCG 58.764 45.833 13.43 5.29 33.10 4.63
1720 9209 7.690952 ATTCGTCTAAGAGATGTATACCCTC 57.309 40.000 12.10 12.10 33.10 4.30
1721 9210 8.480133 AAATTCGTCTAAGAGATGTATACCCT 57.520 34.615 0.00 0.00 33.10 4.34
1722 9211 9.543783 AAAAATTCGTCTAAGAGATGTATACCC 57.456 33.333 0.00 0.00 33.10 3.69
1745 9234 3.460103 GATCGCGTCCCCACTATAAAAA 58.540 45.455 5.77 0.00 0.00 1.94
1746 9235 2.224113 GGATCGCGTCCCCACTATAAAA 60.224 50.000 5.77 0.00 41.50 1.52
1747 9236 1.342174 GGATCGCGTCCCCACTATAAA 59.658 52.381 5.77 0.00 41.50 1.40
1748 9237 0.963962 GGATCGCGTCCCCACTATAA 59.036 55.000 5.77 0.00 41.50 0.98
1749 9238 2.649831 GGATCGCGTCCCCACTATA 58.350 57.895 5.77 0.00 41.50 1.31
1750 9239 3.456317 GGATCGCGTCCCCACTAT 58.544 61.111 5.77 0.00 41.50 2.12
1758 9247 2.389713 CAAATGGATTGGATCGCGTC 57.610 50.000 5.77 2.75 35.27 5.19
1767 9256 4.202010 GGTTCATCGTACCCAAATGGATTG 60.202 45.833 0.00 0.00 38.84 2.67
1768 9257 3.951680 GGTTCATCGTACCCAAATGGATT 59.048 43.478 0.00 0.00 37.39 3.01
1769 9258 3.551846 GGTTCATCGTACCCAAATGGAT 58.448 45.455 0.00 0.00 37.39 3.41
1770 9259 2.993937 GGTTCATCGTACCCAAATGGA 58.006 47.619 0.00 0.00 37.39 3.41
1778 9267 0.248621 CGTACCGGGTTCATCGTACC 60.249 60.000 4.31 0.00 34.82 3.34
1779 9268 0.248621 CCGTACCGGGTTCATCGTAC 60.249 60.000 4.31 0.00 44.15 3.67
1780 9269 2.105984 CCGTACCGGGTTCATCGTA 58.894 57.895 4.31 0.00 44.15 3.43
1781 9270 2.887360 CCGTACCGGGTTCATCGT 59.113 61.111 4.31 0.00 44.15 3.73
1791 9280 0.039798 CGACCCATGATACCGTACCG 60.040 60.000 0.00 0.00 0.00 4.02
1792 9281 1.268899 CTCGACCCATGATACCGTACC 59.731 57.143 0.00 0.00 0.00 3.34
1793 9282 1.268899 CCTCGACCCATGATACCGTAC 59.731 57.143 0.00 0.00 0.00 3.67
1794 9283 1.143481 TCCTCGACCCATGATACCGTA 59.857 52.381 0.00 0.00 0.00 4.02
1795 9284 0.106369 TCCTCGACCCATGATACCGT 60.106 55.000 0.00 0.00 0.00 4.83
1796 9285 1.037493 TTCCTCGACCCATGATACCG 58.963 55.000 0.00 0.00 0.00 4.02
1797 9286 1.269621 CGTTCCTCGACCCATGATACC 60.270 57.143 0.00 0.00 42.86 2.73
1798 9287 1.868519 GCGTTCCTCGACCCATGATAC 60.869 57.143 0.00 0.00 42.86 2.24
1799 9288 0.387929 GCGTTCCTCGACCCATGATA 59.612 55.000 0.00 0.00 42.86 2.15
1800 9289 1.144057 GCGTTCCTCGACCCATGAT 59.856 57.895 0.00 0.00 42.86 2.45
1801 9290 2.225791 CTGCGTTCCTCGACCCATGA 62.226 60.000 0.00 0.00 42.86 3.07
1802 9291 1.811266 CTGCGTTCCTCGACCCATG 60.811 63.158 0.00 0.00 42.86 3.66
1803 9292 1.827399 AACTGCGTTCCTCGACCCAT 61.827 55.000 0.00 0.00 42.86 4.00
1804 9293 2.430382 GAACTGCGTTCCTCGACCCA 62.430 60.000 9.40 0.00 42.86 4.51
1805 9294 1.737008 GAACTGCGTTCCTCGACCC 60.737 63.158 9.40 0.00 42.86 4.46
1806 9295 0.319641 AAGAACTGCGTTCCTCGACC 60.320 55.000 14.85 0.00 42.85 4.79
1807 9296 0.784778 CAAGAACTGCGTTCCTCGAC 59.215 55.000 14.85 0.00 42.85 4.20
1808 9297 0.671796 TCAAGAACTGCGTTCCTCGA 59.328 50.000 14.85 8.50 42.85 4.04
1809 9298 1.457303 CTTCAAGAACTGCGTTCCTCG 59.543 52.381 14.85 6.82 42.85 4.63
1810 9299 2.755650 TCTTCAAGAACTGCGTTCCTC 58.244 47.619 14.85 0.00 42.85 3.71
1811 9300 2.910688 TCTTCAAGAACTGCGTTCCT 57.089 45.000 14.85 3.11 42.85 3.36
1821 9310 2.288030 GGGAGTCGTCGTTCTTCAAGAA 60.288 50.000 0.00 0.00 0.00 2.52
1822 9311 1.268899 GGGAGTCGTCGTTCTTCAAGA 59.731 52.381 0.00 0.00 0.00 3.02
1823 9312 1.269998 AGGGAGTCGTCGTTCTTCAAG 59.730 52.381 0.00 0.00 0.00 3.02
1824 9313 1.000607 CAGGGAGTCGTCGTTCTTCAA 60.001 52.381 0.00 0.00 0.00 2.69
1825 9314 0.596577 CAGGGAGTCGTCGTTCTTCA 59.403 55.000 0.00 0.00 0.00 3.02
1826 9315 0.879765 TCAGGGAGTCGTCGTTCTTC 59.120 55.000 0.00 0.00 0.00 2.87
1827 9316 0.597072 GTCAGGGAGTCGTCGTTCTT 59.403 55.000 0.00 0.00 0.00 2.52
1828 9317 1.575576 CGTCAGGGAGTCGTCGTTCT 61.576 60.000 0.00 0.00 0.00 3.01
1829 9318 1.154263 CGTCAGGGAGTCGTCGTTC 60.154 63.158 0.00 0.00 0.00 3.95
1830 9319 2.623915 CCGTCAGGGAGTCGTCGTT 61.624 63.158 0.00 0.00 38.47 3.85
1831 9320 3.054503 CCGTCAGGGAGTCGTCGT 61.055 66.667 0.00 0.00 38.47 4.34
1832 9321 3.036783 GACCGTCAGGGAGTCGTCG 62.037 68.421 0.00 0.00 43.47 5.12
1833 9322 1.924320 CTGACCGTCAGGGAGTCGTC 61.924 65.000 19.29 0.00 40.71 4.20
1834 9323 1.972223 CTGACCGTCAGGGAGTCGT 60.972 63.158 19.29 0.00 40.71 4.34
1835 9324 2.878429 CTGACCGTCAGGGAGTCG 59.122 66.667 19.29 0.00 40.71 4.18
1836 9325 1.608717 ATGCTGACCGTCAGGGAGTC 61.609 60.000 26.24 12.16 44.43 3.36
1837 9326 1.194781 AATGCTGACCGTCAGGGAGT 61.195 55.000 26.24 8.28 44.43 3.85
1838 9327 0.460987 GAATGCTGACCGTCAGGGAG 60.461 60.000 26.24 5.97 44.43 4.30
1839 9328 1.596934 GAATGCTGACCGTCAGGGA 59.403 57.895 26.24 11.52 44.43 4.20
1840 9329 1.450312 GGAATGCTGACCGTCAGGG 60.450 63.158 26.24 7.00 44.43 4.45
1841 9330 0.036010 AAGGAATGCTGACCGTCAGG 60.036 55.000 26.24 11.10 44.43 3.86
1842 9331 1.081892 CAAGGAATGCTGACCGTCAG 58.918 55.000 22.14 22.14 46.90 3.51
1843 9332 0.396435 ACAAGGAATGCTGACCGTCA 59.604 50.000 0.29 0.29 0.00 4.35
1844 9333 1.197721 CAACAAGGAATGCTGACCGTC 59.802 52.381 0.00 0.00 0.00 4.79
1845 9334 1.238439 CAACAAGGAATGCTGACCGT 58.762 50.000 0.00 0.00 0.00 4.83
1846 9335 1.238439 ACAACAAGGAATGCTGACCG 58.762 50.000 0.00 0.00 0.00 4.79
1847 9336 4.846779 TTAACAACAAGGAATGCTGACC 57.153 40.909 0.00 0.00 0.00 4.02
1848 9337 5.048083 TCCATTAACAACAAGGAATGCTGAC 60.048 40.000 0.00 0.00 0.00 3.51
1849 9338 5.076182 TCCATTAACAACAAGGAATGCTGA 58.924 37.500 0.00 0.00 0.00 4.26
1850 9339 5.389859 TCCATTAACAACAAGGAATGCTG 57.610 39.130 0.00 0.00 0.00 4.41
1851 9340 5.127682 GGATCCATTAACAACAAGGAATGCT 59.872 40.000 6.95 0.00 31.17 3.79
1852 9341 5.351458 GGATCCATTAACAACAAGGAATGC 58.649 41.667 6.95 0.00 31.17 3.56
1853 9342 5.658190 AGGGATCCATTAACAACAAGGAATG 59.342 40.000 15.23 0.00 31.17 2.67
1854 9343 5.842339 AGGGATCCATTAACAACAAGGAAT 58.158 37.500 15.23 0.00 31.17 3.01
1855 9344 5.269554 AGGGATCCATTAACAACAAGGAA 57.730 39.130 15.23 0.00 31.17 3.36
1856 9345 4.946160 AGGGATCCATTAACAACAAGGA 57.054 40.909 15.23 0.00 0.00 3.36
1857 9346 4.381932 GCAAGGGATCCATTAACAACAAGG 60.382 45.833 12.07 0.00 0.00 3.61
1858 9347 4.220382 TGCAAGGGATCCATTAACAACAAG 59.780 41.667 12.07 0.00 0.00 3.16
1859 9348 4.155709 TGCAAGGGATCCATTAACAACAA 58.844 39.130 12.07 0.00 0.00 2.83
1860 9349 3.772387 TGCAAGGGATCCATTAACAACA 58.228 40.909 12.07 2.88 0.00 3.33
1861 9350 4.799564 TTGCAAGGGATCCATTAACAAC 57.200 40.909 12.07 0.23 0.00 3.32
1862 9351 7.487822 TTAATTGCAAGGGATCCATTAACAA 57.512 32.000 21.87 21.87 0.00 2.83
1863 9352 7.418827 CCATTAATTGCAAGGGATCCATTAACA 60.419 37.037 12.07 10.46 30.83 2.41
1864 9353 6.930722 CCATTAATTGCAAGGGATCCATTAAC 59.069 38.462 12.07 7.82 30.83 2.01
1865 9354 6.843333 TCCATTAATTGCAAGGGATCCATTAA 59.157 34.615 12.07 12.37 33.61 1.40
1866 9355 6.267471 GTCCATTAATTGCAAGGGATCCATTA 59.733 38.462 12.07 3.65 40.25 1.90
1867 9356 5.070847 GTCCATTAATTGCAAGGGATCCATT 59.929 40.000 15.23 10.59 40.25 3.16
1868 9357 4.590222 GTCCATTAATTGCAAGGGATCCAT 59.410 41.667 15.23 2.55 40.25 3.41
1869 9358 3.960102 GTCCATTAATTGCAAGGGATCCA 59.040 43.478 15.23 0.00 40.25 3.41
1870 9359 4.218312 AGTCCATTAATTGCAAGGGATCC 58.782 43.478 4.94 1.92 40.25 3.36
1871 9360 5.360714 TCAAGTCCATTAATTGCAAGGGATC 59.639 40.000 4.94 2.80 40.25 3.36
1872 9361 5.271598 TCAAGTCCATTAATTGCAAGGGAT 58.728 37.500 4.94 0.00 40.25 3.85
1873 9362 4.671831 TCAAGTCCATTAATTGCAAGGGA 58.328 39.130 4.94 3.97 36.08 4.20
1874 9363 4.706476 TCTCAAGTCCATTAATTGCAAGGG 59.294 41.667 4.94 1.48 0.00 3.95
1875 9364 5.902613 TCTCAAGTCCATTAATTGCAAGG 57.097 39.130 4.94 0.00 0.00 3.61
1876 9365 7.596494 TCTTTCTCAAGTCCATTAATTGCAAG 58.404 34.615 4.94 0.00 0.00 4.01
1877 9366 7.523293 TCTTTCTCAAGTCCATTAATTGCAA 57.477 32.000 0.00 0.00 0.00 4.08
1878 9367 7.523293 TTCTTTCTCAAGTCCATTAATTGCA 57.477 32.000 0.00 0.00 0.00 4.08
1879 9368 8.246180 TCATTCTTTCTCAAGTCCATTAATTGC 58.754 33.333 0.00 0.00 0.00 3.56
1880 9369 9.784680 CTCATTCTTTCTCAAGTCCATTAATTG 57.215 33.333 0.00 0.00 0.00 2.32
1881 9370 8.964772 CCTCATTCTTTCTCAAGTCCATTAATT 58.035 33.333 0.00 0.00 0.00 1.40
1882 9371 8.331740 TCCTCATTCTTTCTCAAGTCCATTAAT 58.668 33.333 0.00 0.00 0.00 1.40
1883 9372 7.689299 TCCTCATTCTTTCTCAAGTCCATTAA 58.311 34.615 0.00 0.00 0.00 1.40
1884 9373 7.038017 ACTCCTCATTCTTTCTCAAGTCCATTA 60.038 37.037 0.00 0.00 0.00 1.90
1885 9374 6.131972 TCCTCATTCTTTCTCAAGTCCATT 57.868 37.500 0.00 0.00 0.00 3.16
1886 9375 5.250313 ACTCCTCATTCTTTCTCAAGTCCAT 59.750 40.000 0.00 0.00 0.00 3.41
1887 9376 4.594920 ACTCCTCATTCTTTCTCAAGTCCA 59.405 41.667 0.00 0.00 0.00 4.02
1888 9377 5.159273 ACTCCTCATTCTTTCTCAAGTCC 57.841 43.478 0.00 0.00 0.00 3.85
1889 9378 6.463360 AGAACTCCTCATTCTTTCTCAAGTC 58.537 40.000 0.00 0.00 32.32 3.01
1890 9379 6.432403 AGAACTCCTCATTCTTTCTCAAGT 57.568 37.500 0.00 0.00 32.32 3.16
1891 9380 6.933521 TCAAGAACTCCTCATTCTTTCTCAAG 59.066 38.462 0.00 0.00 42.46 3.02
1892 9381 6.830912 TCAAGAACTCCTCATTCTTTCTCAA 58.169 36.000 0.00 0.00 42.46 3.02
1893 9382 6.268617 TCTCAAGAACTCCTCATTCTTTCTCA 59.731 38.462 0.00 0.00 42.46 3.27
1894 9383 6.696411 TCTCAAGAACTCCTCATTCTTTCTC 58.304 40.000 0.00 0.00 42.46 2.87
1895 9384 6.678568 TCTCAAGAACTCCTCATTCTTTCT 57.321 37.500 0.00 0.00 42.46 2.52
1896 9385 7.736447 TTTCTCAAGAACTCCTCATTCTTTC 57.264 36.000 0.00 0.00 42.46 2.62
1897 9386 7.995488 TCTTTTCTCAAGAACTCCTCATTCTTT 59.005 33.333 0.00 0.00 42.46 2.52
1898 9387 7.512992 TCTTTTCTCAAGAACTCCTCATTCTT 58.487 34.615 0.00 0.00 45.24 2.52
1899 9388 7.072263 TCTTTTCTCAAGAACTCCTCATTCT 57.928 36.000 0.00 0.00 38.05 2.40
1900 9389 7.736447 TTCTTTTCTCAAGAACTCCTCATTC 57.264 36.000 0.00 0.00 33.13 2.67
1901 9390 7.254932 CGTTTCTTTTCTCAAGAACTCCTCATT 60.255 37.037 0.00 0.00 36.14 2.57
1902 9391 6.203723 CGTTTCTTTTCTCAAGAACTCCTCAT 59.796 38.462 0.00 0.00 36.14 2.90
1903 9392 5.523916 CGTTTCTTTTCTCAAGAACTCCTCA 59.476 40.000 0.00 0.00 36.14 3.86
1904 9393 5.753921 TCGTTTCTTTTCTCAAGAACTCCTC 59.246 40.000 0.00 0.00 36.14 3.71
1905 9394 5.524281 GTCGTTTCTTTTCTCAAGAACTCCT 59.476 40.000 0.00 0.00 36.14 3.69
1906 9395 5.293569 TGTCGTTTCTTTTCTCAAGAACTCC 59.706 40.000 0.00 0.00 36.14 3.85
1907 9396 6.345920 TGTCGTTTCTTTTCTCAAGAACTC 57.654 37.500 0.00 0.00 36.14 3.01
1908 9397 6.292381 CGATGTCGTTTCTTTTCTCAAGAACT 60.292 38.462 0.00 0.00 36.14 3.01
1909 9398 5.841296 CGATGTCGTTTCTTTTCTCAAGAAC 59.159 40.000 0.00 0.00 36.14 3.01
1910 9399 5.974300 CGATGTCGTTTCTTTTCTCAAGAA 58.026 37.500 0.00 0.00 34.73 2.52
1911 9400 5.576337 CGATGTCGTTTCTTTTCTCAAGA 57.424 39.130 0.00 0.00 34.11 3.02
1926 9415 4.745125 AGGCATAATTTACTCACGATGTCG 59.255 41.667 0.11 0.11 46.33 4.35
1927 9416 5.753438 TGAGGCATAATTTACTCACGATGTC 59.247 40.000 0.00 0.00 35.24 3.06
1928 9417 5.523916 GTGAGGCATAATTTACTCACGATGT 59.476 40.000 7.76 0.00 46.84 3.06
1929 9418 5.978878 GTGAGGCATAATTTACTCACGATG 58.021 41.667 7.76 0.00 46.84 3.84
1934 9423 6.348950 CCAAAACGTGAGGCATAATTTACTCA 60.349 38.462 0.00 0.00 37.61 3.41
1935 9424 6.027749 CCAAAACGTGAGGCATAATTTACTC 58.972 40.000 0.00 0.00 0.00 2.59
1936 9425 5.949735 CCAAAACGTGAGGCATAATTTACT 58.050 37.500 0.00 0.00 0.00 2.24
1947 9436 0.030638 CCAACAGCCAAAACGTGAGG 59.969 55.000 0.00 0.00 0.00 3.86
1948 9437 1.021202 TCCAACAGCCAAAACGTGAG 58.979 50.000 0.00 0.00 0.00 3.51
1949 9438 1.606668 GATCCAACAGCCAAAACGTGA 59.393 47.619 0.00 0.00 0.00 4.35
1950 9439 1.335872 GGATCCAACAGCCAAAACGTG 60.336 52.381 6.95 0.00 0.00 4.49
1951 9440 0.958822 GGATCCAACAGCCAAAACGT 59.041 50.000 6.95 0.00 0.00 3.99
1952 9441 1.068333 CAGGATCCAACAGCCAAAACG 60.068 52.381 15.82 0.00 30.00 3.60
1953 9442 2.238521 TCAGGATCCAACAGCCAAAAC 58.761 47.619 15.82 0.00 30.00 2.43
1954 9443 2.673775 TCAGGATCCAACAGCCAAAA 57.326 45.000 15.82 0.00 30.00 2.44
1955 9444 2.673775 TTCAGGATCCAACAGCCAAA 57.326 45.000 15.82 0.00 30.00 3.28
1956 9445 2.673775 TTTCAGGATCCAACAGCCAA 57.326 45.000 15.82 0.00 30.00 4.52
1957 9446 2.309755 AGATTTCAGGATCCAACAGCCA 59.690 45.455 15.82 0.00 30.00 4.75
1958 9447 2.686915 CAGATTTCAGGATCCAACAGCC 59.313 50.000 15.82 0.00 0.00 4.85
1959 9448 3.614092 TCAGATTTCAGGATCCAACAGC 58.386 45.455 15.82 0.00 0.00 4.40
1960 9449 5.007430 CGATTCAGATTTCAGGATCCAACAG 59.993 44.000 15.82 0.57 0.00 3.16
1961 9450 4.877823 CGATTCAGATTTCAGGATCCAACA 59.122 41.667 15.82 0.00 0.00 3.33
1962 9451 5.118990 TCGATTCAGATTTCAGGATCCAAC 58.881 41.667 15.82 0.00 0.00 3.77
1963 9452 5.357742 TCGATTCAGATTTCAGGATCCAA 57.642 39.130 15.82 0.00 0.00 3.53
1964 9453 4.202295 CCTCGATTCAGATTTCAGGATCCA 60.202 45.833 15.82 0.00 0.00 3.41
1965 9454 4.039730 TCCTCGATTCAGATTTCAGGATCC 59.960 45.833 2.48 2.48 0.00 3.36
1966 9455 5.207110 TCCTCGATTCAGATTTCAGGATC 57.793 43.478 0.00 0.00 0.00 3.36
1967 9456 4.502950 GCTCCTCGATTCAGATTTCAGGAT 60.503 45.833 0.00 0.00 0.00 3.24
1968 9457 3.181471 GCTCCTCGATTCAGATTTCAGGA 60.181 47.826 0.00 0.00 0.00 3.86
1969 9458 3.129871 GCTCCTCGATTCAGATTTCAGG 58.870 50.000 0.00 0.00 0.00 3.86
1970 9459 3.790091 TGCTCCTCGATTCAGATTTCAG 58.210 45.455 0.00 0.00 0.00 3.02
1971 9460 3.431346 CCTGCTCCTCGATTCAGATTTCA 60.431 47.826 0.00 0.00 0.00 2.69
1972 9461 3.129871 CCTGCTCCTCGATTCAGATTTC 58.870 50.000 0.00 0.00 0.00 2.17
1973 9462 2.744494 GCCTGCTCCTCGATTCAGATTT 60.744 50.000 0.00 0.00 0.00 2.17
1974 9463 1.202627 GCCTGCTCCTCGATTCAGATT 60.203 52.381 0.00 0.00 0.00 2.40
1975 9464 0.392336 GCCTGCTCCTCGATTCAGAT 59.608 55.000 0.00 0.00 0.00 2.90
1976 9465 0.685785 AGCCTGCTCCTCGATTCAGA 60.686 55.000 0.00 0.00 0.00 3.27
1977 9466 0.530211 CAGCCTGCTCCTCGATTCAG 60.530 60.000 0.00 0.00 0.00 3.02
1978 9467 1.519246 CAGCCTGCTCCTCGATTCA 59.481 57.895 0.00 0.00 0.00 2.57
1979 9468 1.886777 GCAGCCTGCTCCTCGATTC 60.887 63.158 10.04 0.00 40.96 2.52
1980 9469 2.188994 GCAGCCTGCTCCTCGATT 59.811 61.111 10.04 0.00 40.96 3.34
1981 9470 4.218578 CGCAGCCTGCTCCTCGAT 62.219 66.667 15.80 0.00 42.25 3.59
1998 9487 0.880718 GATGAAGATTCGGCGTCCCC 60.881 60.000 6.85 0.00 0.00 4.81
1999 9488 1.215655 CGATGAAGATTCGGCGTCCC 61.216 60.000 6.85 0.00 33.05 4.46
2000 9489 0.248907 TCGATGAAGATTCGGCGTCC 60.249 55.000 6.85 0.00 37.22 4.79
2001 9490 1.556564 TTCGATGAAGATTCGGCGTC 58.443 50.000 6.85 0.00 37.22 5.19
2002 9491 2.128035 GATTCGATGAAGATTCGGCGT 58.872 47.619 6.85 0.00 37.22 5.68
2003 9492 1.123217 CGATTCGATGAAGATTCGGCG 59.877 52.381 0.00 0.00 39.14 6.46
2004 9493 2.128035 ACGATTCGATGAAGATTCGGC 58.872 47.619 13.95 0.00 43.84 5.54
2005 9494 3.669122 GGTACGATTCGATGAAGATTCGG 59.331 47.826 13.95 0.43 43.84 4.30
2006 9495 4.870315 GGTACGATTCGATGAAGATTCG 57.130 45.455 13.95 8.94 44.58 3.34
2019 9508 4.198919 CGAGGTCGGATTCGGTACGATT 62.199 54.545 0.00 0.00 46.68 3.34
2020 9509 2.735025 CGAGGTCGGATTCGGTACGAT 61.735 57.143 0.00 0.00 46.68 3.73
2022 9511 1.010350 CGAGGTCGGATTCGGTACG 60.010 63.158 0.00 0.00 45.33 3.67
2023 9512 0.453390 AACGAGGTCGGATTCGGTAC 59.547 55.000 15.86 0.00 44.95 3.34
2024 9513 0.734889 GAACGAGGTCGGATTCGGTA 59.265 55.000 15.86 0.00 44.95 4.02
2025 9514 1.509923 GAACGAGGTCGGATTCGGT 59.490 57.895 15.86 11.18 44.95 4.69
2026 9515 1.226888 GGAACGAGGTCGGATTCGG 60.227 63.158 15.86 2.91 44.95 4.30
2027 9516 1.226888 GGGAACGAGGTCGGATTCG 60.227 63.158 4.13 11.65 44.95 3.34
2028 9517 4.829588 GGGAACGAGGTCGGATTC 57.170 61.111 4.13 0.00 44.95 2.52
2040 9529 2.601562 CGGAATCGGATTCGGGAAC 58.398 57.895 23.25 10.70 40.17 3.62
2051 9540 1.419374 GATTCATCGACCCGGAATCG 58.581 55.000 18.79 18.79 38.02 3.34
2063 9552 1.067495 GTCCCTCGATCCCGATTCATC 60.067 57.143 0.00 0.00 44.62 2.92
2064 9553 0.969894 GTCCCTCGATCCCGATTCAT 59.030 55.000 0.00 0.00 44.62 2.57
2065 9554 1.452953 CGTCCCTCGATCCCGATTCA 61.453 60.000 0.00 0.00 44.62 2.57
2066 9555 1.286260 CGTCCCTCGATCCCGATTC 59.714 63.158 0.00 0.00 44.62 2.52
2067 9556 2.201022 CCGTCCCTCGATCCCGATT 61.201 63.158 0.00 0.00 44.62 3.34
2068 9557 2.597805 CCGTCCCTCGATCCCGAT 60.598 66.667 0.00 0.00 44.62 4.18
2071 9560 3.804638 TAGGCCGTCCCTCGATCCC 62.805 68.421 0.00 0.00 44.96 3.85
2072 9561 2.203451 TAGGCCGTCCCTCGATCC 60.203 66.667 0.00 0.00 44.96 3.36
2073 9562 2.562876 GGTAGGCCGTCCCTCGATC 61.563 68.421 0.00 0.00 44.96 3.69
2074 9563 2.521224 GGTAGGCCGTCCCTCGAT 60.521 66.667 0.00 0.00 44.96 3.59
2084 9573 3.258228 AAACGGGGAACGGTAGGCC 62.258 63.158 0.00 0.00 45.59 5.19
2085 9574 1.742880 GAAACGGGGAACGGTAGGC 60.743 63.158 0.00 0.00 45.59 3.93
2086 9575 1.078918 GGAAACGGGGAACGGTAGG 60.079 63.158 0.00 0.00 45.59 3.18
2087 9576 4.604114 GGAAACGGGGAACGGTAG 57.396 61.111 0.00 0.00 45.59 3.18
2099 9588 5.014808 TCTTAACCATAGTAGCCGGAAAC 57.985 43.478 5.05 1.02 0.00 2.78
2100 9589 5.221581 GGATCTTAACCATAGTAGCCGGAAA 60.222 44.000 5.05 0.00 0.00 3.13
2101 9590 4.282703 GGATCTTAACCATAGTAGCCGGAA 59.717 45.833 5.05 0.00 0.00 4.30
2102 9591 3.830755 GGATCTTAACCATAGTAGCCGGA 59.169 47.826 5.05 0.00 0.00 5.14
2103 9592 3.833070 AGGATCTTAACCATAGTAGCCGG 59.167 47.826 0.00 0.00 0.00 6.13
2104 9593 5.470047 AAGGATCTTAACCATAGTAGCCG 57.530 43.478 0.00 0.00 0.00 5.52
2105 9594 5.927115 CGAAAGGATCTTAACCATAGTAGCC 59.073 44.000 0.00 0.00 0.00 3.93
2142 9631 0.469144 GAGGAGGGGAAGAGATCGCT 60.469 60.000 0.00 0.00 40.67 4.93
2147 9636 1.706575 CCAGGAGGAGGGGAAGAGA 59.293 63.158 0.00 0.00 36.89 3.10
2343 9832 2.987125 GTGGCCGCCTTCCTTCTA 59.013 61.111 11.61 0.00 0.00 2.10
2585 10208 3.332485 TGGCTTCCCTTGTAGGTTGTTAT 59.668 43.478 0.00 0.00 31.93 1.89
2715 10338 1.375908 GAGGACGTTGCATGCCTCA 60.376 57.895 16.68 0.00 44.91 3.86
2816 10439 1.323271 CCGCTCTGGCCTGAACTCTA 61.323 60.000 13.89 0.00 34.44 2.43
2848 10471 3.976015 TGTTTCCCTTGAAGTCCACTTT 58.024 40.909 0.00 0.00 36.11 2.66
2867 10490 3.255969 ACGGTGTGTACTCAAAGTTGT 57.744 42.857 0.00 0.00 0.00 3.32
2907 10530 1.878775 GAACAGCATGCCTGGACAC 59.121 57.895 15.66 0.00 46.14 3.67
3071 10694 2.739293 GCGCTAATTAAGAGGCACAC 57.261 50.000 0.00 0.00 0.00 3.82
3105 10728 7.818997 ACTTAGTCGATCACATCCACTATTA 57.181 36.000 0.00 0.00 33.90 0.98
3106 10729 6.716934 ACTTAGTCGATCACATCCACTATT 57.283 37.500 0.00 0.00 33.90 1.73
3127 10750 3.197766 TGGAATGTTCGATCTAGCCAACT 59.802 43.478 0.00 0.00 0.00 3.16
3287 10920 4.577096 ACACTTATATTGGGATGGAGGGA 58.423 43.478 0.00 0.00 0.00 4.20
3288 10921 4.599241 AGACACTTATATTGGGATGGAGGG 59.401 45.833 0.00 0.00 0.00 4.30
3289 10922 5.832539 AGACACTTATATTGGGATGGAGG 57.167 43.478 0.00 0.00 0.00 4.30
3290 10923 8.432805 AGTTAAGACACTTATATTGGGATGGAG 58.567 37.037 0.00 0.00 0.00 3.86
3291 10924 8.331931 AGTTAAGACACTTATATTGGGATGGA 57.668 34.615 0.00 0.00 0.00 3.41
3292 10925 8.980481 AAGTTAAGACACTTATATTGGGATGG 57.020 34.615 0.00 0.00 35.10 3.51
3294 10927 9.975218 ACAAAGTTAAGACACTTATATTGGGAT 57.025 29.630 0.00 0.00 35.87 3.85
3302 10935 9.857957 GAGCTAGTACAAAGTTAAGACACTTAT 57.142 33.333 0.00 0.00 35.87 1.73
3303 10936 9.075678 AGAGCTAGTACAAAGTTAAGACACTTA 57.924 33.333 0.00 0.00 35.87 2.24
3304 10937 7.953752 AGAGCTAGTACAAAGTTAAGACACTT 58.046 34.615 0.00 0.00 38.74 3.16
3305 10938 7.527568 AGAGCTAGTACAAAGTTAAGACACT 57.472 36.000 0.00 0.00 0.00 3.55
3306 10939 8.513774 ACTAGAGCTAGTACAAAGTTAAGACAC 58.486 37.037 8.35 0.00 43.98 3.67
3307 10940 8.632906 ACTAGAGCTAGTACAAAGTTAAGACA 57.367 34.615 8.35 0.00 43.98 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.