Multiple sequence alignment - TraesCS2B01G087500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G087500 chr2B 100.000 2738 0 0 1 2738 49486927 49484190 0.000000e+00 5057
1 TraesCS2B01G087500 chr2B 83.497 1121 141 26 644 1743 49521306 49522403 0.000000e+00 1005
2 TraesCS2B01G087500 chr2B 81.903 967 120 28 860 1800 49599948 49600885 0.000000e+00 765
3 TraesCS2B01G087500 chr2B 76.911 654 90 35 1090 1741 49698008 49698602 5.690000e-82 315
4 TraesCS2B01G087500 chr2B 84.815 270 28 5 558 826 49697652 49697909 2.700000e-65 259
5 TraesCS2B01G087500 chr2B 75.710 634 87 35 1113 1741 49653133 49653704 3.500000e-64 255
6 TraesCS2B01G087500 chr2B 84.074 270 29 6 558 826 49665684 49665940 5.850000e-62 248
7 TraesCS2B01G087500 chr2B 87.168 226 16 5 602 826 49651541 49651754 7.570000e-61 244
8 TraesCS2B01G087500 chr2B 90.076 131 11 2 393 521 49651257 49651387 4.690000e-38 169
9 TraesCS2B01G087500 chr2B 88.596 114 11 2 393 504 49665369 49665482 1.320000e-28 137
10 TraesCS2B01G087500 chr2B 88.696 115 9 1 367 481 49697314 49697424 1.320000e-28 137
11 TraesCS2B01G087500 chr2D 89.016 1220 84 16 691 1880 30401742 30400543 0.000000e+00 1465
12 TraesCS2B01G087500 chr2D 86.003 1236 108 37 603 1818 30398766 30397576 0.000000e+00 1264
13 TraesCS2B01G087500 chr2D 83.261 1159 120 37 603 1741 30421952 30423056 0.000000e+00 998
14 TraesCS2B01G087500 chr2D 85.232 711 54 22 4 699 30402519 30401845 0.000000e+00 684
15 TraesCS2B01G087500 chr2D 91.946 447 35 1 1822 2267 30360721 30360275 2.310000e-175 625
16 TraesCS2B01G087500 chr2D 87.209 172 16 3 7 172 30359202 30359031 1.000000e-44 191
17 TraesCS2B01G087500 chr2D 77.689 251 23 18 668 896 30358606 30358367 3.700000e-24 122
18 TraesCS2B01G087500 chr2A 84.277 954 96 34 805 1740 32369679 32370596 0.000000e+00 881
19 TraesCS2B01G087500 chr2A 87.462 654 44 17 716 1347 32333856 32333219 0.000000e+00 719
20 TraesCS2B01G087500 chr2A 80.871 941 101 36 827 1730 32281040 32280142 0.000000e+00 667
21 TraesCS2B01G087500 chr2A 86.196 326 19 9 1611 1915 32330035 32329715 2.030000e-86 329
22 TraesCS2B01G087500 chr2A 88.112 286 18 11 2 284 32334973 32334701 2.630000e-85 326
23 TraesCS2B01G087500 chr2A 89.627 241 22 1 1378 1615 32333224 32332984 1.230000e-78 303
24 TraesCS2B01G087500 chr2A 85.957 235 25 5 561 792 32375455 32375684 7.570000e-61 244
25 TraesCS2B01G087500 chr2A 82.110 218 27 10 315 521 32375164 32375380 2.800000e-40 176
26 TraesCS2B01G087500 chr2A 86.395 147 14 3 523 664 32333993 32333848 3.650000e-34 156
27 TraesCS2B01G087500 chr2A 88.095 126 11 1 378 503 32334519 32334398 2.200000e-31 147
28 TraesCS2B01G087500 chr2A 86.842 114 12 3 603 714 32369395 32369507 1.030000e-24 124
29 TraesCS2B01G087500 chr7B 78.088 251 47 2 2496 2738 384201852 384202102 4.720000e-33 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G087500 chr2B 49484190 49486927 2737 True 5057.000000 5057 100.000000 1 2738 1 chr2B.!!$R1 2737
1 TraesCS2B01G087500 chr2B 49521306 49522403 1097 False 1005.000000 1005 83.497000 644 1743 1 chr2B.!!$F1 1099
2 TraesCS2B01G087500 chr2B 49599948 49600885 937 False 765.000000 765 81.903000 860 1800 1 chr2B.!!$F2 940
3 TraesCS2B01G087500 chr2B 49697314 49698602 1288 False 237.000000 315 83.474000 367 1741 3 chr2B.!!$F5 1374
4 TraesCS2B01G087500 chr2B 49651257 49653704 2447 False 222.666667 255 84.318000 393 1741 3 chr2B.!!$F3 1348
5 TraesCS2B01G087500 chr2D 30397576 30402519 4943 True 1137.666667 1465 86.750333 4 1880 3 chr2D.!!$R2 1876
6 TraesCS2B01G087500 chr2D 30421952 30423056 1104 False 998.000000 998 83.261000 603 1741 1 chr2D.!!$F1 1138
7 TraesCS2B01G087500 chr2D 30358367 30360721 2354 True 312.666667 625 85.614667 7 2267 3 chr2D.!!$R1 2260
8 TraesCS2B01G087500 chr2A 32280142 32281040 898 True 667.000000 667 80.871000 827 1730 1 chr2A.!!$R1 903
9 TraesCS2B01G087500 chr2A 32369395 32370596 1201 False 502.500000 881 85.559500 603 1740 2 chr2A.!!$F1 1137
10 TraesCS2B01G087500 chr2A 32329715 32334973 5258 True 330.000000 719 87.647833 2 1915 6 chr2A.!!$R2 1913
11 TraesCS2B01G087500 chr2A 32375164 32375684 520 False 210.000000 244 84.033500 315 792 2 chr2A.!!$F2 477

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 1813 0.034337 TCGTTTGTCCCCAGCTACAC 59.966 55.0 0.0 0.0 0.0 2.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2176 8996 0.032217 AGGAGGCAGAGGAGAGGAAG 60.032 60.0 0.0 0.0 0.0 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 1556 2.888534 GCGCGGCCGATCTAACAA 60.889 61.111 33.48 0.00 36.29 2.83
63 1577 2.203337 CACCACCACCACCACCAG 60.203 66.667 0.00 0.00 0.00 4.00
137 1661 3.056322 AGAATTGAGAAAGTGCAATGCCC 60.056 43.478 1.53 0.00 35.11 5.36
184 1709 6.645415 CGCAAGGGATTAAGGTAATACAGTAG 59.355 42.308 0.00 0.00 30.30 2.57
260 1785 0.179100 CGATTCCATCAGACAGCCGT 60.179 55.000 0.00 0.00 0.00 5.68
261 1786 1.740380 CGATTCCATCAGACAGCCGTT 60.740 52.381 0.00 0.00 0.00 4.44
262 1787 1.936547 GATTCCATCAGACAGCCGTTC 59.063 52.381 0.00 0.00 0.00 3.95
263 1788 0.389817 TTCCATCAGACAGCCGTTCG 60.390 55.000 0.00 0.00 0.00 3.95
284 1809 1.597027 CGTTCGTTTGTCCCCAGCT 60.597 57.895 0.00 0.00 0.00 4.24
286 1811 1.154197 GTTCGTTTGTCCCCAGCTAC 58.846 55.000 0.00 0.00 0.00 3.58
287 1812 0.759959 TTCGTTTGTCCCCAGCTACA 59.240 50.000 0.00 0.00 0.00 2.74
288 1813 0.034337 TCGTTTGTCCCCAGCTACAC 59.966 55.000 0.00 0.00 0.00 2.90
289 1814 0.034896 CGTTTGTCCCCAGCTACACT 59.965 55.000 0.00 0.00 0.00 3.55
290 1815 1.274167 CGTTTGTCCCCAGCTACACTA 59.726 52.381 0.00 0.00 0.00 2.74
291 1816 2.289195 CGTTTGTCCCCAGCTACACTAA 60.289 50.000 0.00 0.00 0.00 2.24
293 1818 2.018355 TGTCCCCAGCTACACTAACA 57.982 50.000 0.00 0.00 0.00 2.41
294 1819 1.621814 TGTCCCCAGCTACACTAACAC 59.378 52.381 0.00 0.00 0.00 3.32
295 1820 1.900486 GTCCCCAGCTACACTAACACT 59.100 52.381 0.00 0.00 0.00 3.55
296 1821 1.899814 TCCCCAGCTACACTAACACTG 59.100 52.381 0.00 0.00 0.00 3.66
298 1823 1.623811 CCCAGCTACACTAACACTGGT 59.376 52.381 6.60 0.00 45.26 4.00
300 1825 3.451178 CCCAGCTACACTAACACTGGTAT 59.549 47.826 6.60 0.00 45.26 2.73
334 1935 1.200020 GAATGTTCCCAGCACTTTCCG 59.800 52.381 0.00 0.00 0.00 4.30
388 2045 2.350057 AGGCAGTAGAGTAGATCGCA 57.650 50.000 0.00 0.00 0.00 5.10
389 2046 2.226330 AGGCAGTAGAGTAGATCGCAG 58.774 52.381 0.00 0.00 0.00 5.18
390 2047 1.268352 GGCAGTAGAGTAGATCGCAGG 59.732 57.143 0.00 0.00 0.00 4.85
391 2048 2.222886 GCAGTAGAGTAGATCGCAGGA 58.777 52.381 0.00 0.00 0.00 3.86
489 2148 5.867166 TGAAAAGTGTAACCGTGTTAACAC 58.133 37.500 25.73 25.73 41.97 3.32
509 2574 7.484035 AACACAAGAGTTACTGATTGAGTTC 57.516 36.000 12.16 0.00 33.21 3.01
597 2789 3.403277 GCATCAGCTACGTGCCTG 58.597 61.111 0.00 4.51 44.23 4.85
630 2826 2.485814 GCAACTTCCATGTCACTTCCTC 59.514 50.000 0.00 0.00 0.00 3.71
633 2829 0.976641 TTCCATGTCACTTCCTCGCT 59.023 50.000 0.00 0.00 0.00 4.93
675 2875 8.089115 AGATGACGAGGCTTTAATTAATTAGC 57.911 34.615 12.64 12.64 0.00 3.09
740 3064 2.354503 GGCATCTGAAACTGCTCTCTGA 60.355 50.000 2.18 0.00 38.45 3.27
795 3120 4.023536 CCACCCAACAAACATGTACAGTAC 60.024 45.833 0.00 3.49 0.00 2.73
962 3426 1.002544 CTTCCCTTCTGACTGGGTGAC 59.997 57.143 12.83 0.00 43.74 3.67
963 3427 1.185618 TCCCTTCTGACTGGGTGACG 61.186 60.000 12.83 0.00 43.74 4.35
978 3446 0.538584 TGACGATCCTGCATGCTCTT 59.461 50.000 20.33 0.84 0.00 2.85
1053 3543 2.819984 AATGCGGCGACCAACCAGAT 62.820 55.000 12.98 0.00 0.00 2.90
1055 3545 2.819595 CGGCGACCAACCAGATGG 60.820 66.667 0.00 0.00 46.38 3.51
1064 3554 2.356278 ACCAGATGGCGCAATGGT 59.644 55.556 10.83 14.37 41.22 3.55
1117 4864 2.989253 TCTCGCAGGTCGCCTTCA 60.989 61.111 0.00 0.00 37.30 3.02
1118 4865 2.811317 CTCGCAGGTCGCCTTCAC 60.811 66.667 0.00 0.00 37.30 3.18
1158 4908 4.468713 TCCTCTCATTGATCTCATCGTCT 58.531 43.478 0.00 0.00 0.00 4.18
1206 4959 0.736053 CTTCGTCCTCTCTCCCTTCG 59.264 60.000 0.00 0.00 0.00 3.79
1358 5162 2.994699 CACGGCCACCCTATCCAA 59.005 61.111 2.24 0.00 0.00 3.53
1365 5169 1.134371 GCCACCCTATCCAAGAGTGAC 60.134 57.143 0.00 0.00 0.00 3.67
1366 5170 1.137086 CCACCCTATCCAAGAGTGACG 59.863 57.143 0.00 0.00 0.00 4.35
1367 5171 2.100197 CACCCTATCCAAGAGTGACGA 58.900 52.381 0.00 0.00 0.00 4.20
1371 5178 3.576118 CCCTATCCAAGAGTGACGATGAT 59.424 47.826 0.00 0.00 0.00 2.45
1392 5199 3.466836 TGTCGTCACAGCTTCTGAATTT 58.533 40.909 0.29 0.00 35.18 1.82
1402 5209 2.682856 GCTTCTGAATTTCCGCCATGTA 59.317 45.455 0.00 0.00 0.00 2.29
1534 5356 2.050351 CGGTGTCGTCGCAGTTCT 60.050 61.111 0.00 0.00 0.00 3.01
1647 8440 2.225491 GCTAGAGATCGACGAGCTCAAT 59.775 50.000 36.18 23.26 46.10 2.57
1764 8567 9.727627 CTTTGAGAGCAATAGGATTAATTTGAC 57.272 33.333 2.46 0.00 33.25 3.18
1796 8599 3.883830 ACTAGGTTGAGATGAGCAGTG 57.116 47.619 0.00 0.00 0.00 3.66
1820 8623 5.720202 AGGTTCTTTCTTTTGTGTTGTTCC 58.280 37.500 0.00 0.00 0.00 3.62
1821 8624 4.868171 GGTTCTTTCTTTTGTGTTGTTCCC 59.132 41.667 0.00 0.00 0.00 3.97
1843 8663 7.132805 TCCCATATATATACCCAGAACCTCTG 58.867 42.308 0.00 0.00 43.91 3.35
1850 8670 2.320587 CCAGAACCTCTGCGTGTGC 61.321 63.158 0.00 0.00 42.98 4.57
1872 8692 3.705604 GAGGTTGTTTGTGGTGTGAATG 58.294 45.455 0.00 0.00 0.00 2.67
1875 8695 4.037923 AGGTTGTTTGTGGTGTGAATGATC 59.962 41.667 0.00 0.00 0.00 2.92
1883 8703 3.308053 GTGGTGTGAATGATCGATGTCAG 59.692 47.826 0.54 0.00 0.00 3.51
1887 8707 2.033065 GTGAATGATCGATGTCAGCTGC 60.033 50.000 9.47 4.92 0.00 5.25
1902 8722 1.728971 AGCTGCTTTCAACTCGATTCG 59.271 47.619 0.00 0.00 0.00 3.34
1912 8732 1.014044 ACTCGATTCGCGTGCACATT 61.014 50.000 18.64 0.00 41.80 2.71
1915 8735 0.629767 CGATTCGCGTGCACATTTTG 59.370 50.000 18.64 0.39 34.64 2.44
1916 8736 0.984109 GATTCGCGTGCACATTTTGG 59.016 50.000 18.64 0.00 0.00 3.28
1917 8737 0.595588 ATTCGCGTGCACATTTTGGA 59.404 45.000 18.64 1.10 0.00 3.53
1918 8738 0.040514 TTCGCGTGCACATTTTGGAG 60.041 50.000 18.64 0.86 0.00 3.86
1919 8739 2.082366 CGCGTGCACATTTTGGAGC 61.082 57.895 18.64 8.32 0.00 4.70
1920 8740 1.007502 GCGTGCACATTTTGGAGCA 60.008 52.632 18.64 0.00 31.76 4.26
1921 8741 1.277495 GCGTGCACATTTTGGAGCAC 61.277 55.000 18.64 13.77 44.45 4.40
1922 8742 0.311790 CGTGCACATTTTGGAGCACT 59.688 50.000 18.64 0.00 45.16 4.40
1923 8743 1.774639 GTGCACATTTTGGAGCACTG 58.225 50.000 13.17 0.00 44.48 3.66
1924 8744 1.067516 GTGCACATTTTGGAGCACTGT 59.932 47.619 13.17 0.00 44.48 3.55
1925 8745 1.067364 TGCACATTTTGGAGCACTGTG 59.933 47.619 2.76 2.76 40.06 3.66
1926 8746 1.067516 GCACATTTTGGAGCACTGTGT 59.932 47.619 9.86 0.00 39.45 3.72
1927 8747 2.859806 GCACATTTTGGAGCACTGTGTC 60.860 50.000 9.86 5.84 39.45 3.67
1928 8748 1.603802 ACATTTTGGAGCACTGTGTCG 59.396 47.619 9.86 0.00 0.00 4.35
1929 8749 1.603802 CATTTTGGAGCACTGTGTCGT 59.396 47.619 9.86 0.00 0.00 4.34
1930 8750 1.013596 TTTTGGAGCACTGTGTCGTG 58.986 50.000 9.86 0.00 37.94 4.35
1940 8760 2.463653 CACTGTGTCGTGCAAATTTTCG 59.536 45.455 0.00 0.00 0.00 3.46
1941 8761 1.447938 CTGTGTCGTGCAAATTTTCGC 59.552 47.619 0.00 0.00 0.00 4.70
1942 8762 1.202188 TGTGTCGTGCAAATTTTCGCA 60.202 42.857 2.43 0.90 35.30 5.10
1943 8763 1.849219 GTGTCGTGCAAATTTTCGCAA 59.151 42.857 4.89 0.00 40.44 4.85
1944 8764 2.470999 GTGTCGTGCAAATTTTCGCAAT 59.529 40.909 4.89 0.00 40.44 3.56
1945 8765 3.060607 GTGTCGTGCAAATTTTCGCAATT 60.061 39.130 4.89 0.00 40.44 2.32
1946 8766 3.060674 TGTCGTGCAAATTTTCGCAATTG 60.061 39.130 4.89 0.00 40.44 2.32
1947 8767 2.097007 TCGTGCAAATTTTCGCAATTGC 60.097 40.909 20.76 20.76 46.29 3.56
1948 8768 2.096811 CGTGCAAATTTTCGCAATTGCT 60.097 40.909 26.86 6.07 46.27 3.91
1949 8769 3.472431 GTGCAAATTTTCGCAATTGCTC 58.528 40.909 26.86 0.76 46.27 4.26
1950 8770 2.479656 TGCAAATTTTCGCAATTGCTCC 59.520 40.909 26.86 0.00 46.27 4.70
1951 8771 2.479656 GCAAATTTTCGCAATTGCTCCA 59.520 40.909 26.86 9.02 43.58 3.86
1952 8772 3.125658 GCAAATTTTCGCAATTGCTCCAT 59.874 39.130 26.86 11.37 43.58 3.41
1953 8773 4.643953 CAAATTTTCGCAATTGCTCCATG 58.356 39.130 26.86 11.97 39.32 3.66
1954 8774 1.712401 TTTTCGCAATTGCTCCATGC 58.288 45.000 26.86 0.64 43.25 4.06
1955 8775 0.889994 TTTCGCAATTGCTCCATGCT 59.110 45.000 26.86 0.00 43.37 3.79
1956 8776 0.452987 TTCGCAATTGCTCCATGCTC 59.547 50.000 26.86 0.00 43.37 4.26
1957 8777 1.065273 CGCAATTGCTCCATGCTCC 59.935 57.895 26.86 0.00 43.37 4.70
1958 8778 1.659622 CGCAATTGCTCCATGCTCCA 61.660 55.000 26.86 0.00 43.37 3.86
1959 8779 0.533491 GCAATTGCTCCATGCTCCAA 59.467 50.000 23.21 0.00 43.37 3.53
1960 8780 1.066716 GCAATTGCTCCATGCTCCAAA 60.067 47.619 23.21 0.00 43.37 3.28
1961 8781 2.613474 GCAATTGCTCCATGCTCCAAAA 60.613 45.455 23.21 0.00 43.37 2.44
1962 8782 3.869065 CAATTGCTCCATGCTCCAAAAT 58.131 40.909 0.00 0.00 43.37 1.82
1963 8783 4.258543 CAATTGCTCCATGCTCCAAAATT 58.741 39.130 0.00 0.00 43.37 1.82
1964 8784 5.421277 CAATTGCTCCATGCTCCAAAATTA 58.579 37.500 0.00 0.00 43.37 1.40
1965 8785 5.680594 ATTGCTCCATGCTCCAAAATTAA 57.319 34.783 0.00 0.00 43.37 1.40
1966 8786 4.454728 TGCTCCATGCTCCAAAATTAAC 57.545 40.909 0.00 0.00 43.37 2.01
1967 8787 4.088634 TGCTCCATGCTCCAAAATTAACT 58.911 39.130 0.00 0.00 43.37 2.24
1968 8788 5.260424 TGCTCCATGCTCCAAAATTAACTA 58.740 37.500 0.00 0.00 43.37 2.24
1969 8789 5.893255 TGCTCCATGCTCCAAAATTAACTAT 59.107 36.000 0.00 0.00 43.37 2.12
1970 8790 7.059788 TGCTCCATGCTCCAAAATTAACTATA 58.940 34.615 0.00 0.00 43.37 1.31
1971 8791 7.229306 TGCTCCATGCTCCAAAATTAACTATAG 59.771 37.037 0.00 0.00 43.37 1.31
1972 8792 7.308830 GCTCCATGCTCCAAAATTAACTATAGG 60.309 40.741 4.43 0.00 38.95 2.57
1973 8793 7.811282 TCCATGCTCCAAAATTAACTATAGGA 58.189 34.615 4.43 0.00 0.00 2.94
1974 8794 8.448008 TCCATGCTCCAAAATTAACTATAGGAT 58.552 33.333 4.43 0.00 0.00 3.24
1975 8795 9.082313 CCATGCTCCAAAATTAACTATAGGATT 57.918 33.333 4.43 0.00 0.00 3.01
1991 8811 9.406113 ACTATAGGATTTAGTAACAGAACGTCT 57.594 33.333 4.43 0.00 0.00 4.18
1996 8816 9.768662 AGGATTTAGTAACAGAACGTCTAAAAA 57.231 29.630 7.25 0.00 35.32 1.94
1997 8817 9.803130 GGATTTAGTAACAGAACGTCTAAAAAC 57.197 33.333 7.25 5.60 35.32 2.43
2007 8827 9.292846 ACAGAACGTCTAAAAACATTTTTAACC 57.707 29.630 10.03 4.17 40.79 2.85
2008 8828 8.466026 CAGAACGTCTAAAAACATTTTTAACCG 58.534 33.333 17.49 17.49 40.79 4.44
2009 8829 8.397148 AGAACGTCTAAAAACATTTTTAACCGA 58.603 29.630 21.94 11.19 40.79 4.69
2010 8830 9.172820 GAACGTCTAAAAACATTTTTAACCGAT 57.827 29.630 21.94 15.64 40.79 4.18
2011 8831 8.718047 ACGTCTAAAAACATTTTTAACCGATC 57.282 30.769 21.94 8.96 40.79 3.69
2012 8832 7.804600 ACGTCTAAAAACATTTTTAACCGATCC 59.195 33.333 21.94 5.65 40.79 3.36
2013 8833 7.271868 CGTCTAAAAACATTTTTAACCGATCCC 59.728 37.037 15.67 1.23 40.79 3.85
2014 8834 7.543172 GTCTAAAAACATTTTTAACCGATCCCC 59.457 37.037 10.03 0.00 40.79 4.81
2015 8835 6.428083 AAAAACATTTTTAACCGATCCCCT 57.572 33.333 0.45 0.00 38.50 4.79
2016 8836 7.541916 AAAAACATTTTTAACCGATCCCCTA 57.458 32.000 0.45 0.00 38.50 3.53
2017 8837 7.727578 AAAACATTTTTAACCGATCCCCTAT 57.272 32.000 0.00 0.00 0.00 2.57
2018 8838 8.826293 AAAACATTTTTAACCGATCCCCTATA 57.174 30.769 0.00 0.00 0.00 1.31
2019 8839 8.826293 AAACATTTTTAACCGATCCCCTATAA 57.174 30.769 0.00 0.00 0.00 0.98
2020 8840 7.812690 ACATTTTTAACCGATCCCCTATAAC 57.187 36.000 0.00 0.00 0.00 1.89
2021 8841 6.774170 ACATTTTTAACCGATCCCCTATAACC 59.226 38.462 0.00 0.00 0.00 2.85
2022 8842 4.605640 TTTAACCGATCCCCTATAACCG 57.394 45.455 0.00 0.00 0.00 4.44
2023 8843 1.345063 AACCGATCCCCTATAACCGG 58.655 55.000 0.00 0.00 42.30 5.28
2024 8844 0.189327 ACCGATCCCCTATAACCGGT 59.811 55.000 0.00 0.00 44.37 5.28
2025 8845 1.345063 CCGATCCCCTATAACCGGTT 58.655 55.000 25.64 25.64 33.02 4.44
2026 8846 2.158325 ACCGATCCCCTATAACCGGTTA 60.158 50.000 28.40 28.40 46.64 2.85
2027 8847 2.494870 CCGATCCCCTATAACCGGTTAG 59.505 54.545 29.49 19.82 33.02 2.34
2028 8848 3.424703 CGATCCCCTATAACCGGTTAGA 58.575 50.000 29.49 24.82 0.00 2.10
2029 8849 3.828451 CGATCCCCTATAACCGGTTAGAA 59.172 47.826 29.49 19.60 0.00 2.10
2030 8850 4.281688 CGATCCCCTATAACCGGTTAGAAA 59.718 45.833 29.49 17.34 0.00 2.52
2031 8851 5.221501 CGATCCCCTATAACCGGTTAGAAAA 60.222 44.000 29.49 11.18 0.00 2.29
2032 8852 5.619132 TCCCCTATAACCGGTTAGAAAAG 57.381 43.478 29.49 21.86 0.00 2.27
2033 8853 5.032170 TCCCCTATAACCGGTTAGAAAAGT 58.968 41.667 29.49 15.77 0.00 2.66
2034 8854 5.488561 TCCCCTATAACCGGTTAGAAAAGTT 59.511 40.000 29.49 15.09 0.00 2.66
2035 8855 6.671779 TCCCCTATAACCGGTTAGAAAAGTTA 59.328 38.462 29.49 15.39 0.00 2.24
2036 8856 7.181845 TCCCCTATAACCGGTTAGAAAAGTTAA 59.818 37.037 29.49 7.37 0.00 2.01
2037 8857 7.828717 CCCCTATAACCGGTTAGAAAAGTTAAA 59.171 37.037 29.49 6.83 0.00 1.52
2038 8858 8.886719 CCCTATAACCGGTTAGAAAAGTTAAAG 58.113 37.037 29.49 11.66 0.00 1.85
2039 8859 9.440773 CCTATAACCGGTTAGAAAAGTTAAAGT 57.559 33.333 29.49 12.39 0.00 2.66
2041 8861 5.428496 ACCGGTTAGAAAAGTTAAAGTGC 57.572 39.130 0.00 0.00 0.00 4.40
2042 8862 4.883006 ACCGGTTAGAAAAGTTAAAGTGCA 59.117 37.500 0.00 0.00 0.00 4.57
2043 8863 5.008316 ACCGGTTAGAAAAGTTAAAGTGCAG 59.992 40.000 0.00 0.00 0.00 4.41
2044 8864 5.008316 CCGGTTAGAAAAGTTAAAGTGCAGT 59.992 40.000 0.00 0.00 0.00 4.40
2045 8865 6.459161 CCGGTTAGAAAAGTTAAAGTGCAGTT 60.459 38.462 0.00 0.00 0.00 3.16
2046 8866 6.970613 CGGTTAGAAAAGTTAAAGTGCAGTTT 59.029 34.615 22.43 22.43 0.00 2.66
2047 8867 7.486870 CGGTTAGAAAAGTTAAAGTGCAGTTTT 59.513 33.333 23.82 12.42 0.00 2.43
2048 8868 9.791820 GGTTAGAAAAGTTAAAGTGCAGTTTTA 57.208 29.630 23.82 13.01 0.00 1.52
2052 8872 8.957466 AGAAAAGTTAAAGTGCAGTTTTACTCT 58.043 29.630 29.09 21.81 30.10 3.24
2053 8873 9.569167 GAAAAGTTAAAGTGCAGTTTTACTCTT 57.431 29.630 29.09 24.36 30.10 2.85
2054 8874 9.569167 AAAAGTTAAAGTGCAGTTTTACTCTTC 57.431 29.630 29.09 9.79 30.10 2.87
2055 8875 8.507524 AAGTTAAAGTGCAGTTTTACTCTTCT 57.492 30.769 29.09 16.64 30.10 2.85
2056 8876 9.609346 AAGTTAAAGTGCAGTTTTACTCTTCTA 57.391 29.630 29.09 7.50 30.10 2.10
2057 8877 9.609346 AGTTAAAGTGCAGTTTTACTCTTCTAA 57.391 29.630 25.52 9.97 25.76 2.10
2058 8878 9.647679 GTTAAAGTGCAGTTTTACTCTTCTAAC 57.352 33.333 23.82 14.41 0.00 2.34
2059 8879 7.859325 AAAGTGCAGTTTTACTCTTCTAACA 57.141 32.000 13.86 0.00 0.00 2.41
2060 8880 7.484035 AAGTGCAGTTTTACTCTTCTAACAG 57.516 36.000 0.00 0.00 0.00 3.16
2061 8881 5.992217 AGTGCAGTTTTACTCTTCTAACAGG 59.008 40.000 0.00 0.00 0.00 4.00
2062 8882 5.989777 GTGCAGTTTTACTCTTCTAACAGGA 59.010 40.000 0.00 0.00 0.00 3.86
2063 8883 6.482308 GTGCAGTTTTACTCTTCTAACAGGAA 59.518 38.462 0.00 0.00 0.00 3.36
2064 8884 6.482308 TGCAGTTTTACTCTTCTAACAGGAAC 59.518 38.462 0.00 0.00 0.00 3.62
2065 8885 6.073167 GCAGTTTTACTCTTCTAACAGGAACC 60.073 42.308 0.00 0.00 0.00 3.62
2066 8886 7.217906 CAGTTTTACTCTTCTAACAGGAACCT 58.782 38.462 0.00 0.00 0.00 3.50
2067 8887 8.365647 CAGTTTTACTCTTCTAACAGGAACCTA 58.634 37.037 0.00 0.00 0.00 3.08
2068 8888 8.931568 AGTTTTACTCTTCTAACAGGAACCTAA 58.068 33.333 0.00 0.00 0.00 2.69
2069 8889 8.986847 GTTTTACTCTTCTAACAGGAACCTAAC 58.013 37.037 0.00 0.00 0.00 2.34
2070 8890 5.741962 ACTCTTCTAACAGGAACCTAACC 57.258 43.478 0.00 0.00 0.00 2.85
2071 8891 4.220163 ACTCTTCTAACAGGAACCTAACCG 59.780 45.833 0.00 0.00 0.00 4.44
2072 8892 4.410099 TCTTCTAACAGGAACCTAACCGA 58.590 43.478 0.00 0.00 0.00 4.69
2073 8893 5.021458 TCTTCTAACAGGAACCTAACCGAT 58.979 41.667 0.00 0.00 0.00 4.18
2074 8894 4.996788 TCTAACAGGAACCTAACCGATC 57.003 45.455 0.00 0.00 0.00 3.69
2075 8895 4.346730 TCTAACAGGAACCTAACCGATCA 58.653 43.478 0.00 0.00 0.00 2.92
2076 8896 3.329929 AACAGGAACCTAACCGATCAC 57.670 47.619 0.00 0.00 0.00 3.06
2077 8897 1.553704 ACAGGAACCTAACCGATCACC 59.446 52.381 0.00 0.00 0.00 4.02
2078 8898 1.553248 CAGGAACCTAACCGATCACCA 59.447 52.381 0.00 0.00 0.00 4.17
2079 8899 2.027561 CAGGAACCTAACCGATCACCAA 60.028 50.000 0.00 0.00 0.00 3.67
2080 8900 2.844348 AGGAACCTAACCGATCACCAAT 59.156 45.455 0.00 0.00 0.00 3.16
2081 8901 4.035112 AGGAACCTAACCGATCACCAATA 58.965 43.478 0.00 0.00 0.00 1.90
2082 8902 4.124970 GGAACCTAACCGATCACCAATAC 58.875 47.826 0.00 0.00 0.00 1.89
2083 8903 4.383335 GGAACCTAACCGATCACCAATACA 60.383 45.833 0.00 0.00 0.00 2.29
2084 8904 4.133013 ACCTAACCGATCACCAATACAC 57.867 45.455 0.00 0.00 0.00 2.90
2085 8905 3.120792 CCTAACCGATCACCAATACACG 58.879 50.000 0.00 0.00 0.00 4.49
2086 8906 2.754946 AACCGATCACCAATACACGT 57.245 45.000 0.00 0.00 0.00 4.49
2087 8907 2.754946 ACCGATCACCAATACACGTT 57.245 45.000 0.00 0.00 0.00 3.99
2088 8908 3.872511 ACCGATCACCAATACACGTTA 57.127 42.857 0.00 0.00 0.00 3.18
2089 8909 3.777478 ACCGATCACCAATACACGTTAG 58.223 45.455 0.00 0.00 0.00 2.34
2090 8910 3.194116 ACCGATCACCAATACACGTTAGT 59.806 43.478 0.00 0.00 0.00 2.24
2115 8935 6.644191 GAGTAAGAAATTTACTCGGACACC 57.356 41.667 10.31 0.00 40.74 4.16
2131 8951 4.142687 CGGACACCGCAAATCTTCTTATTT 60.143 41.667 0.00 0.00 41.17 1.40
2133 8953 6.156519 GGACACCGCAAATCTTCTTATTTTT 58.843 36.000 0.00 0.00 0.00 1.94
2134 8954 7.309920 GGACACCGCAAATCTTCTTATTTTTA 58.690 34.615 0.00 0.00 0.00 1.52
2137 8957 8.021396 ACACCGCAAATCTTCTTATTTTTACTC 58.979 33.333 0.00 0.00 0.00 2.59
2138 8958 7.484959 CACCGCAAATCTTCTTATTTTTACTCC 59.515 37.037 0.00 0.00 0.00 3.85
2139 8959 7.175990 ACCGCAAATCTTCTTATTTTTACTCCA 59.824 33.333 0.00 0.00 0.00 3.86
2140 8960 7.484959 CCGCAAATCTTCTTATTTTTACTCCAC 59.515 37.037 0.00 0.00 0.00 4.02
2141 8961 8.237267 CGCAAATCTTCTTATTTTTACTCCACT 58.763 33.333 0.00 0.00 0.00 4.00
2142 8962 9.346725 GCAAATCTTCTTATTTTTACTCCACTG 57.653 33.333 0.00 0.00 0.00 3.66
2144 8964 8.870075 AATCTTCTTATTTTTACTCCACTGCT 57.130 30.769 0.00 0.00 0.00 4.24
2146 8966 6.590292 TCTTCTTATTTTTACTCCACTGCTCG 59.410 38.462 0.00 0.00 0.00 5.03
2148 8968 1.519408 TTTTTACTCCACTGCTCGGC 58.481 50.000 0.00 0.00 0.00 5.54
2149 8969 0.669318 TTTTACTCCACTGCTCGGCG 60.669 55.000 0.00 0.00 0.00 6.46
2150 8970 2.501223 TTTACTCCACTGCTCGGCGG 62.501 60.000 7.21 0.00 41.29 6.13
2157 8977 3.826754 CTGCTCGGCGGCTGAGTA 61.827 66.667 32.79 28.92 38.95 2.59
2158 8978 3.356639 CTGCTCGGCGGCTGAGTAA 62.357 63.158 32.79 22.70 38.95 2.24
2159 8979 2.125673 GCTCGGCGGCTGAGTAAA 60.126 61.111 32.79 3.94 38.95 2.01
2160 8980 1.740296 GCTCGGCGGCTGAGTAAAA 60.740 57.895 32.79 3.22 38.95 1.52
2162 8982 0.389948 CTCGGCGGCTGAGTAAAACT 60.390 55.000 26.94 0.00 32.64 2.66
2163 8983 0.034337 TCGGCGGCTGAGTAAAACTT 59.966 50.000 7.57 0.00 0.00 2.66
2165 8985 1.809684 GGCGGCTGAGTAAAACTTCT 58.190 50.000 0.00 0.00 0.00 2.85
2166 8986 1.732809 GGCGGCTGAGTAAAACTTCTC 59.267 52.381 0.00 0.00 0.00 2.87
2167 8987 2.613223 GGCGGCTGAGTAAAACTTCTCT 60.613 50.000 0.00 0.00 0.00 3.10
2168 8988 2.668945 GCGGCTGAGTAAAACTTCTCTC 59.331 50.000 0.00 0.00 0.00 3.20
2169 8989 3.254892 CGGCTGAGTAAAACTTCTCTCC 58.745 50.000 0.00 0.00 0.00 3.71
2170 8990 3.601435 GGCTGAGTAAAACTTCTCTCCC 58.399 50.000 0.00 0.00 0.00 4.30
2171 8991 3.262151 GGCTGAGTAAAACTTCTCTCCCT 59.738 47.826 0.00 0.00 0.00 4.20
2174 8994 5.623596 GCTGAGTAAAACTTCTCTCCCTCTC 60.624 48.000 0.00 0.00 0.00 3.20
2176 8996 5.712917 TGAGTAAAACTTCTCTCCCTCTCTC 59.287 44.000 0.00 0.00 0.00 3.20
2177 8997 5.899278 AGTAAAACTTCTCTCCCTCTCTCT 58.101 41.667 0.00 0.00 0.00 3.10
2178 8998 6.319715 AGTAAAACTTCTCTCCCTCTCTCTT 58.680 40.000 0.00 0.00 0.00 2.85
2179 8999 5.738619 AAAACTTCTCTCCCTCTCTCTTC 57.261 43.478 0.00 0.00 0.00 2.87
2180 9000 3.382083 ACTTCTCTCCCTCTCTCTTCC 57.618 52.381 0.00 0.00 0.00 3.46
2182 9002 3.053619 ACTTCTCTCCCTCTCTCTTCCTC 60.054 52.174 0.00 0.00 0.00 3.71
2183 9003 2.858644 TCTCTCCCTCTCTCTTCCTCT 58.141 52.381 0.00 0.00 0.00 3.69
2184 9004 2.777692 TCTCTCCCTCTCTCTTCCTCTC 59.222 54.545 0.00 0.00 0.00 3.20
2186 9006 1.852965 CTCCCTCTCTCTTCCTCTCCT 59.147 57.143 0.00 0.00 0.00 3.69
2189 9009 2.423373 CCCTCTCTCTTCCTCTCCTCTG 60.423 59.091 0.00 0.00 0.00 3.35
2190 9010 2.301346 CTCTCTCTTCCTCTCCTCTGC 58.699 57.143 0.00 0.00 0.00 4.26
2191 9011 1.064017 TCTCTCTTCCTCTCCTCTGCC 60.064 57.143 0.00 0.00 0.00 4.85
2192 9012 1.006813 TCTCTTCCTCTCCTCTGCCT 58.993 55.000 0.00 0.00 0.00 4.75
2196 9016 0.032615 TTCCTCTCCTCTGCCTCCTC 60.033 60.000 0.00 0.00 0.00 3.71
2197 9017 0.923729 TCCTCTCCTCTGCCTCCTCT 60.924 60.000 0.00 0.00 0.00 3.69
2198 9018 0.032217 CCTCTCCTCTGCCTCCTCTT 60.032 60.000 0.00 0.00 0.00 2.85
2199 9019 1.402787 CTCTCCTCTGCCTCCTCTTC 58.597 60.000 0.00 0.00 0.00 2.87
2201 9021 1.113788 CTCCTCTGCCTCCTCTTCTG 58.886 60.000 0.00 0.00 0.00 3.02
2203 9023 0.823460 CCTCTGCCTCCTCTTCTGTC 59.177 60.000 0.00 0.00 0.00 3.51
2204 9024 1.554836 CTCTGCCTCCTCTTCTGTCA 58.445 55.000 0.00 0.00 0.00 3.58
2205 9025 2.109774 CTCTGCCTCCTCTTCTGTCAT 58.890 52.381 0.00 0.00 0.00 3.06
2206 9026 2.101249 CTCTGCCTCCTCTTCTGTCATC 59.899 54.545 0.00 0.00 0.00 2.92
2208 9028 0.529555 GCCTCCTCTTCTGTCATCGC 60.530 60.000 0.00 0.00 0.00 4.58
2210 9030 0.103937 CTCCTCTTCTGTCATCGCCC 59.896 60.000 0.00 0.00 0.00 6.13
2211 9031 1.144936 CCTCTTCTGTCATCGCCCC 59.855 63.158 0.00 0.00 0.00 5.80
2212 9032 1.227089 CTCTTCTGTCATCGCCCCG 60.227 63.158 0.00 0.00 0.00 5.73
2213 9033 2.892425 CTTCTGTCATCGCCCCGC 60.892 66.667 0.00 0.00 0.00 6.13
2214 9034 4.467084 TTCTGTCATCGCCCCGCC 62.467 66.667 0.00 0.00 0.00 6.13
2244 9064 4.785453 CCTGCCCTTCCCGCTGTC 62.785 72.222 0.00 0.00 0.00 3.51
2245 9065 4.785453 CTGCCCTTCCCGCTGTCC 62.785 72.222 0.00 0.00 0.00 4.02
2249 9069 3.787001 CCTTCCCGCTGTCCCCTC 61.787 72.222 0.00 0.00 0.00 4.30
2250 9070 2.685380 CTTCCCGCTGTCCCCTCT 60.685 66.667 0.00 0.00 0.00 3.69
2251 9071 2.683933 TTCCCGCTGTCCCCTCTC 60.684 66.667 0.00 0.00 0.00 3.20
2252 9072 4.779733 TCCCGCTGTCCCCTCTCC 62.780 72.222 0.00 0.00 0.00 3.71
2254 9074 3.151022 CCGCTGTCCCCTCTCCTC 61.151 72.222 0.00 0.00 0.00 3.71
2255 9075 3.151022 CGCTGTCCCCTCTCCTCC 61.151 72.222 0.00 0.00 0.00 4.30
2256 9076 2.766229 GCTGTCCCCTCTCCTCCC 60.766 72.222 0.00 0.00 0.00 4.30
2257 9077 2.780693 CTGTCCCCTCTCCTCCCA 59.219 66.667 0.00 0.00 0.00 4.37
2258 9078 1.081092 CTGTCCCCTCTCCTCCCAA 59.919 63.158 0.00 0.00 0.00 4.12
2260 9080 0.621571 TGTCCCCTCTCCTCCCAATG 60.622 60.000 0.00 0.00 0.00 2.82
2261 9081 1.004758 TCCCCTCTCCTCCCAATGG 59.995 63.158 0.00 0.00 0.00 3.16
2262 9082 2.761465 CCCCTCTCCTCCCAATGGC 61.761 68.421 0.00 0.00 0.00 4.40
2264 9084 2.507944 CTCTCCTCCCAATGGCCG 59.492 66.667 0.00 0.00 0.00 6.13
2265 9085 3.089874 TCTCCTCCCAATGGCCGG 61.090 66.667 0.00 0.00 0.00 6.13
2266 9086 3.089874 CTCCTCCCAATGGCCGGA 61.090 66.667 5.05 7.41 32.25 5.14
2269 9089 2.830370 CTCCCAATGGCCGGAAGC 60.830 66.667 5.05 0.00 42.60 3.86
2270 9090 4.794648 TCCCAATGGCCGGAAGCG 62.795 66.667 5.05 0.00 45.17 4.68
2273 9093 3.814268 CAATGGCCGGAAGCGGTG 61.814 66.667 5.05 0.00 45.17 4.94
2285 10146 2.809010 GCGGTGGCTAGAGGTCTC 59.191 66.667 0.00 0.00 35.83 3.36
2289 10150 2.442272 TGGCTAGAGGTCTCCGCC 60.442 66.667 16.93 16.93 43.09 6.13
2336 10197 4.112341 CCCCGGTCGTCGTCTGTC 62.112 72.222 0.00 0.00 37.11 3.51
2337 10198 4.456253 CCCGGTCGTCGTCTGTCG 62.456 72.222 0.00 0.00 41.41 4.35
2344 10205 3.735029 GTCGTCTGTCGCCGGTCT 61.735 66.667 1.90 0.00 39.67 3.85
2346 10207 3.432588 CGTCTGTCGCCGGTCTCT 61.433 66.667 1.90 0.00 0.00 3.10
2347 10208 2.486042 GTCTGTCGCCGGTCTCTC 59.514 66.667 1.90 0.00 0.00 3.20
2348 10209 3.125573 TCTGTCGCCGGTCTCTCG 61.126 66.667 1.90 0.00 0.00 4.04
2349 10210 3.125573 CTGTCGCCGGTCTCTCGA 61.126 66.667 1.90 0.00 0.00 4.04
2350 10211 3.102107 CTGTCGCCGGTCTCTCGAG 62.102 68.421 5.93 5.93 32.54 4.04
2351 10212 4.539881 GTCGCCGGTCTCTCGAGC 62.540 72.222 7.81 0.00 32.54 5.03
2357 10218 3.878519 GGTCTCTCGAGCCGTCGG 61.879 72.222 7.81 6.99 46.80 4.79
2374 10235 3.134127 GCGTGTCCCATGCCCTTC 61.134 66.667 0.00 0.00 40.14 3.46
2377 10238 1.678970 GTGTCCCATGCCCTTCCAC 60.679 63.158 0.00 0.00 0.00 4.02
2378 10239 2.438434 GTCCCATGCCCTTCCACG 60.438 66.667 0.00 0.00 0.00 4.94
2379 10240 4.424711 TCCCATGCCCTTCCACGC 62.425 66.667 0.00 0.00 0.00 5.34
2388 10249 3.458163 CTTCCACGCCGCTCCCTA 61.458 66.667 0.00 0.00 0.00 3.53
2389 10250 2.762459 TTCCACGCCGCTCCCTAT 60.762 61.111 0.00 0.00 0.00 2.57
2390 10251 2.701163 CTTCCACGCCGCTCCCTATC 62.701 65.000 0.00 0.00 0.00 2.08
2393 10254 2.913060 ACGCCGCTCCCTATCCTC 60.913 66.667 0.00 0.00 0.00 3.71
2394 10255 3.686045 CGCCGCTCCCTATCCTCC 61.686 72.222 0.00 0.00 0.00 4.30
2395 10256 3.315140 GCCGCTCCCTATCCTCCC 61.315 72.222 0.00 0.00 0.00 4.30
2396 10257 2.201490 CCGCTCCCTATCCTCCCA 59.799 66.667 0.00 0.00 0.00 4.37
2397 10258 1.459539 CCGCTCCCTATCCTCCCAA 60.460 63.158 0.00 0.00 0.00 4.12
2398 10259 0.838122 CCGCTCCCTATCCTCCCAAT 60.838 60.000 0.00 0.00 0.00 3.16
2399 10260 0.322975 CGCTCCCTATCCTCCCAATG 59.677 60.000 0.00 0.00 0.00 2.82
2403 10264 0.687354 CCCTATCCTCCCAATGGACG 59.313 60.000 0.00 0.00 35.03 4.79
2404 10265 0.687354 CCTATCCTCCCAATGGACGG 59.313 60.000 0.00 0.00 35.03 4.79
2407 10268 0.839946 ATCCTCCCAATGGACGGAAG 59.160 55.000 12.28 0.00 39.71 3.46
2408 10269 1.452108 CCTCCCAATGGACGGAAGC 60.452 63.158 0.00 0.00 35.03 3.86
2409 10270 1.815421 CTCCCAATGGACGGAAGCG 60.815 63.158 0.00 0.00 35.03 4.68
2411 10272 2.046314 CCAATGGACGGAAGCGGT 60.046 61.111 0.00 0.00 0.00 5.68
2412 10273 2.398554 CCAATGGACGGAAGCGGTG 61.399 63.158 0.00 0.00 0.00 4.94
2413 10274 2.046314 AATGGACGGAAGCGGTGG 60.046 61.111 0.00 0.00 0.00 4.61
2414 10275 4.778143 ATGGACGGAAGCGGTGGC 62.778 66.667 0.00 0.00 40.37 5.01
2420 10281 4.785453 GGAAGCGGTGGCCAGAGG 62.785 72.222 5.11 0.00 41.24 3.69
2422 10283 3.959991 GAAGCGGTGGCCAGAGGTC 62.960 68.421 5.11 0.00 41.24 3.85
2425 10286 3.775654 CGGTGGCCAGAGGTCTCC 61.776 72.222 5.11 0.00 37.58 3.71
2446 10307 4.819761 GCCGATCCGCTGCACAGA 62.820 66.667 0.81 0.00 0.00 3.41
2447 10308 2.107750 CCGATCCGCTGCACAGAT 59.892 61.111 0.81 0.00 0.00 2.90
2449 10310 1.953138 CGATCCGCTGCACAGATCC 60.953 63.158 14.82 3.01 34.22 3.36
2451 10312 4.819761 TCCGCTGCACAGATCCGC 62.820 66.667 0.81 0.00 0.00 5.54
2454 10315 4.479993 GCTGCACAGATCCGCCCT 62.480 66.667 0.81 0.00 0.00 5.19
2455 10316 2.513204 CTGCACAGATCCGCCCTG 60.513 66.667 0.00 0.00 37.64 4.45
2456 10317 4.783621 TGCACAGATCCGCCCTGC 62.784 66.667 0.00 0.00 35.14 4.85
2458 10319 4.100084 CACAGATCCGCCCTGCCA 62.100 66.667 0.00 0.00 35.14 4.92
2459 10320 4.101448 ACAGATCCGCCCTGCCAC 62.101 66.667 0.00 0.00 35.14 5.01
2483 10344 2.887568 CAGGTCATCGTCTGCCGC 60.888 66.667 0.00 0.00 36.19 6.53
2484 10345 4.148825 AGGTCATCGTCTGCCGCC 62.149 66.667 0.00 0.00 36.19 6.13
2492 10353 4.863925 GTCTGCCGCCGCTCTCTC 62.864 72.222 0.00 0.00 35.36 3.20
2522 10383 2.438434 CGTCCCATGCCCTTCCAC 60.438 66.667 0.00 0.00 0.00 4.02
2523 10384 2.438434 GTCCCATGCCCTTCCACG 60.438 66.667 0.00 0.00 0.00 4.94
2524 10385 4.424711 TCCCATGCCCTTCCACGC 62.425 66.667 0.00 0.00 0.00 5.34
2533 10394 4.821589 CTTCCACGCCGCTCCCTC 62.822 72.222 0.00 0.00 0.00 4.30
2541 10402 4.465446 CCGCTCCCTCTCCTCCCA 62.465 72.222 0.00 0.00 0.00 4.37
2542 10403 2.837291 CGCTCCCTCTCCTCCCAG 60.837 72.222 0.00 0.00 0.00 4.45
2543 10404 2.366570 GCTCCCTCTCCTCCCAGT 59.633 66.667 0.00 0.00 0.00 4.00
2544 10405 2.063378 GCTCCCTCTCCTCCCAGTG 61.063 68.421 0.00 0.00 0.00 3.66
2545 10406 1.382420 CTCCCTCTCCTCCCAGTGG 60.382 68.421 0.63 0.63 0.00 4.00
2546 10407 3.086600 CCCTCTCCTCCCAGTGGC 61.087 72.222 2.61 0.00 0.00 5.01
2547 10408 3.086600 CCTCTCCTCCCAGTGGCC 61.087 72.222 2.61 0.00 0.00 5.36
2569 10430 4.554036 GCGATGGCCAGGGGTCTC 62.554 72.222 13.05 0.79 0.00 3.36
2570 10431 3.866582 CGATGGCCAGGGGTCTCC 61.867 72.222 13.05 0.00 0.00 3.71
2578 10439 4.361971 AGGGGTCTCCGCTGTCGA 62.362 66.667 4.60 0.00 45.23 4.20
2579 10440 3.148279 GGGGTCTCCGCTGTCGAT 61.148 66.667 0.00 0.00 38.10 3.59
2580 10441 2.722201 GGGGTCTCCGCTGTCGATT 61.722 63.158 0.00 0.00 38.10 3.34
2582 10443 1.227002 GGTCTCCGCTGTCGATTCC 60.227 63.158 0.00 0.00 38.10 3.01
2583 10444 1.227002 GTCTCCGCTGTCGATTCCC 60.227 63.158 0.00 0.00 38.10 3.97
2584 10445 1.680989 TCTCCGCTGTCGATTCCCA 60.681 57.895 0.00 0.00 38.10 4.37
2585 10446 1.227089 CTCCGCTGTCGATTCCCAG 60.227 63.158 0.00 0.00 38.10 4.45
2588 10449 3.567797 GCTGTCGATTCCCAGCGC 61.568 66.667 9.64 0.00 43.99 5.92
2589 10450 2.125552 CTGTCGATTCCCAGCGCA 60.126 61.111 11.47 0.00 0.00 6.09
2590 10451 2.125552 TGTCGATTCCCAGCGCAG 60.126 61.111 11.47 0.00 0.00 5.18
2591 10452 2.184322 GTCGATTCCCAGCGCAGA 59.816 61.111 11.47 0.00 0.00 4.26
2592 10453 1.227380 GTCGATTCCCAGCGCAGAT 60.227 57.895 11.47 0.00 0.00 2.90
2594 10455 0.530650 TCGATTCCCAGCGCAGATTC 60.531 55.000 11.47 8.39 0.00 2.52
2597 11769 1.091771 ATTCCCAGCGCAGATTCGTG 61.092 55.000 11.47 0.00 0.00 4.35
2602 11774 2.401195 GCGCAGATTCGTGCTTCC 59.599 61.111 0.30 0.00 41.62 3.46
2608 11780 0.254178 AGATTCGTGCTTCCATGCCT 59.746 50.000 0.00 0.00 0.00 4.75
2613 11785 1.214589 GTGCTTCCATGCCTGCAAG 59.785 57.895 0.00 0.00 37.17 4.01
2614 11786 1.228644 TGCTTCCATGCCTGCAAGT 60.229 52.632 0.00 0.00 32.12 3.16
2615 11787 1.246056 TGCTTCCATGCCTGCAAGTC 61.246 55.000 0.00 0.00 32.12 3.01
2616 11788 1.798735 CTTCCATGCCTGCAAGTCG 59.201 57.895 0.00 0.00 0.00 4.18
2623 11795 3.114616 CCTGCAAGTCGTCGCCTG 61.115 66.667 0.00 0.00 0.00 4.85
2624 11796 3.782244 CTGCAAGTCGTCGCCTGC 61.782 66.667 6.19 6.19 0.00 4.85
2627 11799 4.717629 CAAGTCGTCGCCTGCCGA 62.718 66.667 0.00 0.00 45.15 5.54
2637 11809 4.069232 CCTGCCGACGCTTCCTCA 62.069 66.667 0.00 0.00 35.36 3.86
2640 11812 2.048127 GCCGACGCTTCCTCAAGT 60.048 61.111 0.00 0.00 31.45 3.16
2641 11813 2.095252 GCCGACGCTTCCTCAAGTC 61.095 63.158 0.00 0.00 31.45 3.01
2643 11815 3.464628 GACGCTTCCTCAAGTCGC 58.535 61.111 0.00 0.00 34.47 5.19
2644 11816 2.048127 ACGCTTCCTCAAGTCGCC 60.048 61.111 0.00 0.00 34.47 5.54
2645 11817 2.262915 CGCTTCCTCAAGTCGCCT 59.737 61.111 0.00 0.00 31.45 5.52
2646 11818 1.807573 CGCTTCCTCAAGTCGCCTC 60.808 63.158 0.00 0.00 31.45 4.70
2647 11819 1.448717 GCTTCCTCAAGTCGCCTCC 60.449 63.158 0.00 0.00 31.45 4.30
2650 11822 0.970937 TTCCTCAAGTCGCCTCCGAT 60.971 55.000 0.00 0.00 46.38 4.18
2651 11823 1.066587 CCTCAAGTCGCCTCCGATC 59.933 63.158 0.00 0.00 46.38 3.69
2652 11824 1.066587 CTCAAGTCGCCTCCGATCC 59.933 63.158 0.00 0.00 46.38 3.36
2654 11826 4.208686 AAGTCGCCTCCGATCCGC 62.209 66.667 0.00 0.00 46.38 5.54
2659 11831 4.610714 GCCTCCGATCCGCCCTTC 62.611 72.222 0.00 0.00 0.00 3.46
2660 11832 3.930012 CCTCCGATCCGCCCTTCC 61.930 72.222 0.00 0.00 0.00 3.46
2661 11833 3.930012 CTCCGATCCGCCCTTCCC 61.930 72.222 0.00 0.00 0.00 3.97
2664 11836 4.547367 CGATCCGCCCTTCCCCAC 62.547 72.222 0.00 0.00 0.00 4.61
2670 11842 3.739613 GCCCTTCCCCACCCGATT 61.740 66.667 0.00 0.00 0.00 3.34
2671 11843 2.595655 CCCTTCCCCACCCGATTC 59.404 66.667 0.00 0.00 0.00 2.52
2672 11844 2.001269 CCCTTCCCCACCCGATTCT 61.001 63.158 0.00 0.00 0.00 2.40
2675 11847 0.759346 CTTCCCCACCCGATTCTAGG 59.241 60.000 0.00 0.00 0.00 3.02
2676 11848 0.340558 TTCCCCACCCGATTCTAGGA 59.659 55.000 0.00 0.00 0.00 2.94
2677 11849 0.566176 TCCCCACCCGATTCTAGGAT 59.434 55.000 0.00 0.00 0.00 3.24
2678 11850 1.061657 TCCCCACCCGATTCTAGGATT 60.062 52.381 0.00 0.00 0.00 3.01
2679 11851 1.774856 CCCCACCCGATTCTAGGATTT 59.225 52.381 0.00 0.00 0.00 2.17
2681 11853 2.224548 CCCACCCGATTCTAGGATTTCC 60.225 54.545 0.00 0.00 0.00 3.13
2682 11854 2.224548 CCACCCGATTCTAGGATTTCCC 60.225 54.545 0.00 0.00 36.42 3.97
2683 11855 1.692519 ACCCGATTCTAGGATTTCCCG 59.307 52.381 0.00 0.00 40.87 5.14
2684 11856 1.002087 CCCGATTCTAGGATTTCCCGG 59.998 57.143 0.00 0.00 40.87 5.73
2687 11859 2.610727 CGATTCTAGGATTTCCCGGAGC 60.611 54.545 0.73 0.00 40.87 4.70
2689 11861 1.705873 TCTAGGATTTCCCGGAGCTC 58.294 55.000 0.73 4.71 40.87 4.09
2691 11863 0.763223 TAGGATTTCCCGGAGCTCCC 60.763 60.000 27.20 10.71 40.87 4.30
2693 11865 1.448069 GATTTCCCGGAGCTCCCTC 59.552 63.158 27.20 10.22 37.37 4.30
2718 11890 2.043248 GCCACCCTCGAGGACCTA 60.043 66.667 33.39 0.00 39.89 3.08
2719 11891 2.424733 GCCACCCTCGAGGACCTAC 61.425 68.421 33.39 13.80 39.89 3.18
2720 11892 1.000019 CCACCCTCGAGGACCTACA 60.000 63.158 33.39 0.00 39.89 2.74
2721 11893 0.397254 CCACCCTCGAGGACCTACAT 60.397 60.000 33.39 5.90 39.89 2.29
2722 11894 1.033574 CACCCTCGAGGACCTACATC 58.966 60.000 33.39 0.00 39.89 3.06
2726 11898 2.331805 CGAGGACCTACATCGGCG 59.668 66.667 0.00 0.00 46.77 6.46
2727 11899 2.478890 CGAGGACCTACATCGGCGT 61.479 63.158 6.85 0.00 46.77 5.68
2728 11900 1.814527 GAGGACCTACATCGGCGTT 59.185 57.895 6.85 0.00 0.00 4.84
2729 11901 0.175073 GAGGACCTACATCGGCGTTT 59.825 55.000 6.85 0.00 0.00 3.60
2730 11902 0.108329 AGGACCTACATCGGCGTTTG 60.108 55.000 6.85 8.94 0.00 2.93
2731 11903 1.087771 GGACCTACATCGGCGTTTGG 61.088 60.000 6.85 5.85 0.00 3.28
2732 11904 1.702491 GACCTACATCGGCGTTTGGC 61.702 60.000 6.85 0.00 42.51 4.52
2733 11905 1.743623 CCTACATCGGCGTTTGGCA 60.744 57.895 6.85 0.00 46.16 4.92
2734 11906 1.705337 CCTACATCGGCGTTTGGCAG 61.705 60.000 6.85 7.90 46.16 4.85
2735 11907 2.309764 CTACATCGGCGTTTGGCAGC 62.310 60.000 6.85 0.00 46.16 5.25
2736 11908 4.817063 CATCGGCGTTTGGCAGCG 62.817 66.667 6.85 8.79 46.16 5.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.357279 AGGGGGACAAGCAGCAGC 62.357 66.667 0.00 0.00 42.56 5.25
42 1556 3.018193 TGGTGGTGGTGGTGGTGT 61.018 61.111 0.00 0.00 0.00 4.16
73 1587 4.081185 TTGGCAGCGAGATCGGCA 62.081 61.111 13.19 2.51 40.23 5.69
137 1661 3.564225 GGTCACCCAACAACTCACTAAAG 59.436 47.826 0.00 0.00 0.00 1.85
160 1684 7.506971 ACTACTGTATTACCTTAATCCCTTGC 58.493 38.462 0.00 0.00 0.00 4.01
161 1685 9.978044 GTACTACTGTATTACCTTAATCCCTTG 57.022 37.037 4.49 0.00 0.00 3.61
184 1709 2.032675 GCTGGCAGGTAGTAGTACGTAC 59.967 54.545 18.10 18.10 0.00 3.67
260 1785 0.929615 GGGACAAACGAACGAACGAA 59.070 50.000 11.97 0.00 37.03 3.85
261 1786 0.875474 GGGGACAAACGAACGAACGA 60.875 55.000 11.97 0.00 37.03 3.85
262 1787 1.152989 TGGGGACAAACGAACGAACG 61.153 55.000 0.14 0.00 37.44 3.95
263 1788 0.584876 CTGGGGACAAACGAACGAAC 59.415 55.000 0.14 0.00 42.06 3.95
286 1811 9.095065 GACCAAATACTAATACCAGTGTTAGTG 57.905 37.037 22.70 12.38 43.90 2.74
287 1812 8.262933 GGACCAAATACTAATACCAGTGTTAGT 58.737 37.037 19.55 19.55 45.32 2.24
288 1813 7.437267 CGGACCAAATACTAATACCAGTGTTAG 59.563 40.741 11.44 11.44 39.31 2.34
289 1814 7.123997 TCGGACCAAATACTAATACCAGTGTTA 59.876 37.037 0.00 0.00 30.63 2.41
290 1815 6.070653 TCGGACCAAATACTAATACCAGTGTT 60.071 38.462 0.00 0.00 31.94 3.32
291 1816 5.422970 TCGGACCAAATACTAATACCAGTGT 59.577 40.000 0.00 0.00 0.00 3.55
293 1818 6.549433 TTCGGACCAAATACTAATACCAGT 57.451 37.500 0.00 0.00 0.00 4.00
294 1819 6.990349 ACATTCGGACCAAATACTAATACCAG 59.010 38.462 0.00 0.00 0.00 4.00
295 1820 6.891388 ACATTCGGACCAAATACTAATACCA 58.109 36.000 0.00 0.00 0.00 3.25
296 1821 7.041576 GGAACATTCGGACCAAATACTAATACC 60.042 40.741 0.00 0.00 0.00 2.73
298 1823 6.993902 GGGAACATTCGGACCAAATACTAATA 59.006 38.462 0.00 0.00 0.00 0.98
300 1825 5.187687 GGGAACATTCGGACCAAATACTAA 58.812 41.667 0.00 0.00 0.00 2.24
388 2045 3.392616 AGTTGACAGTGATGTTCCTTCCT 59.607 43.478 0.00 0.00 0.00 3.36
389 2046 3.499918 CAGTTGACAGTGATGTTCCTTCC 59.500 47.826 0.00 0.00 0.00 3.46
390 2047 4.024556 CACAGTTGACAGTGATGTTCCTTC 60.025 45.833 0.00 0.00 35.69 3.46
391 2048 3.879295 CACAGTTGACAGTGATGTTCCTT 59.121 43.478 0.00 0.00 35.69 3.36
430 2087 2.594303 CTTGCAAGCCACCCACGA 60.594 61.111 14.65 0.00 0.00 4.35
462 2119 4.609691 ACACGGTTACACTTTTCAGTTG 57.390 40.909 0.00 0.00 0.00 3.16
489 2148 6.459066 TCTGGAACTCAATCAGTAACTCTTG 58.541 40.000 0.00 0.00 32.30 3.02
509 2574 1.414181 AGTAGATGGGCGACATTCTGG 59.586 52.381 2.62 0.00 40.72 3.86
597 2789 2.293170 GGAAGTTGCTCATCCTTAGCC 58.707 52.381 0.00 0.00 39.30 3.93
613 2805 1.066573 AGCGAGGAAGTGACATGGAAG 60.067 52.381 0.00 0.00 0.00 3.46
630 2826 8.609176 GTCATCTCCTTAGATAGAGTATAAGCG 58.391 40.741 0.00 0.00 40.65 4.68
633 2829 9.878667 CTCGTCATCTCCTTAGATAGAGTATAA 57.121 37.037 0.00 0.00 40.65 0.98
675 2875 0.539438 TGTTTAAGCAGGGGTGCCAG 60.539 55.000 0.00 0.00 34.90 4.85
740 3064 3.708631 TGGGATCCAAACACAAACACAAT 59.291 39.130 15.23 0.00 0.00 2.71
795 3120 4.051922 GGTGAAGCAATGATACTCCTACG 58.948 47.826 0.00 0.00 0.00 3.51
962 3426 2.674954 CTCTAAGAGCATGCAGGATCG 58.325 52.381 21.98 3.52 0.00 3.69
978 3446 2.675317 GCTCGCTTCTTTCCTTGCTCTA 60.675 50.000 0.00 0.00 0.00 2.43
1053 3543 1.677518 CCAGTAGTAACCATTGCGCCA 60.678 52.381 4.18 0.00 0.00 5.69
1055 3545 0.377203 GCCAGTAGTAACCATTGCGC 59.623 55.000 0.00 0.00 0.00 6.09
1064 3554 1.445410 CTGCGCGTGCCAGTAGTAA 60.445 57.895 19.87 0.00 41.78 2.24
1352 5156 4.261197 CGACATCATCGTCACTCTTGGATA 60.261 45.833 0.00 0.00 46.25 2.59
1365 5169 6.955716 TCAGAAGCTGTGACGACATCATCG 62.956 50.000 0.00 0.00 43.53 3.84
1366 5170 2.602211 CAGAAGCTGTGACGACATCATC 59.398 50.000 0.00 0.00 40.28 2.92
1367 5171 2.232208 TCAGAAGCTGTGACGACATCAT 59.768 45.455 0.00 0.00 40.28 2.45
1371 5178 2.820059 ATTCAGAAGCTGTGACGACA 57.180 45.000 0.00 0.00 32.61 4.35
1379 5186 1.167851 TGGCGGAAATTCAGAAGCTG 58.832 50.000 0.00 0.00 0.00 4.24
1380 5187 1.747355 CATGGCGGAAATTCAGAAGCT 59.253 47.619 0.00 0.00 0.00 3.74
1392 5199 0.390603 CTTGAACGGTACATGGCGGA 60.391 55.000 0.00 0.00 0.00 5.54
1402 5209 0.877071 CATGCTTGAGCTTGAACGGT 59.123 50.000 12.10 0.00 45.61 4.83
1488 5307 2.860735 CTCTCGTTTAATCCCTTGCTCG 59.139 50.000 0.00 0.00 0.00 5.03
1534 5356 0.323451 TCCTCGAGCCTAGCTGACAA 60.323 55.000 6.99 0.00 39.88 3.18
1718 8515 1.045407 TTAGACGACCTGTTGCTGGT 58.955 50.000 0.00 0.00 38.38 4.00
1768 8571 8.250143 TGCTCATCTCAACCTAGTAAATCATA 57.750 34.615 0.00 0.00 0.00 2.15
1796 8599 5.805486 GGAACAACACAAAAGAAAGAACCTC 59.195 40.000 0.00 0.00 0.00 3.85
1820 8623 6.821388 GCAGAGGTTCTGGGTATATATATGG 58.179 44.000 5.44 0.00 44.43 2.74
1843 8663 1.654137 CAAACAACCTCGCACACGC 60.654 57.895 0.00 0.00 39.84 5.34
1850 8670 1.374560 TCACACCACAAACAACCTCG 58.625 50.000 0.00 0.00 0.00 4.63
1872 8692 2.274437 TGAAAGCAGCTGACATCGATC 58.726 47.619 20.43 5.58 0.00 3.69
1875 8695 1.802960 AGTTGAAAGCAGCTGACATCG 59.197 47.619 20.43 0.00 34.03 3.84
1883 8703 1.788344 GCGAATCGAGTTGAAAGCAGC 60.788 52.381 6.91 0.00 0.00 5.25
1887 8707 1.783416 GCACGCGAATCGAGTTGAAAG 60.783 52.381 15.93 0.00 37.87 2.62
1902 8722 1.007502 TGCTCCAAAATGTGCACGC 60.008 52.632 13.13 7.25 0.00 5.34
1912 8732 2.689083 CACGACACAGTGCTCCAAA 58.311 52.632 0.00 0.00 35.17 3.28
1919 8739 2.463653 CGAAAATTTGCACGACACAGTG 59.536 45.455 0.00 0.00 44.47 3.66
1920 8740 2.715268 CGAAAATTTGCACGACACAGT 58.285 42.857 0.00 0.00 0.00 3.55
1921 8741 1.447938 GCGAAAATTTGCACGACACAG 59.552 47.619 13.93 0.00 37.52 3.66
1922 8742 1.202188 TGCGAAAATTTGCACGACACA 60.202 42.857 13.93 3.50 42.41 3.72
1923 8743 1.471964 TGCGAAAATTTGCACGACAC 58.528 45.000 13.93 1.53 42.41 3.67
1924 8744 2.194800 TTGCGAAAATTTGCACGACA 57.805 40.000 7.56 9.61 46.66 4.35
1925 8745 3.459435 CAATTGCGAAAATTTGCACGAC 58.541 40.909 7.56 7.84 46.66 4.34
1926 8746 2.097007 GCAATTGCGAAAATTTGCACGA 60.097 40.909 15.87 0.00 46.66 4.35
1927 8747 2.096811 AGCAATTGCGAAAATTTGCACG 60.097 40.909 24.02 5.70 46.66 5.34
1928 8748 3.472431 GAGCAATTGCGAAAATTTGCAC 58.528 40.909 24.02 6.67 46.66 4.57
1946 8766 4.725790 AGTTAATTTTGGAGCATGGAGC 57.274 40.909 0.00 0.00 46.19 4.70
1947 8767 7.939039 TCCTATAGTTAATTTTGGAGCATGGAG 59.061 37.037 0.00 0.00 0.00 3.86
1948 8768 7.811282 TCCTATAGTTAATTTTGGAGCATGGA 58.189 34.615 0.00 0.00 0.00 3.41
1949 8769 8.641498 ATCCTATAGTTAATTTTGGAGCATGG 57.359 34.615 0.00 0.00 0.00 3.66
1965 8785 9.406113 AGACGTTCTGTTACTAAATCCTATAGT 57.594 33.333 0.00 0.00 37.39 2.12
1970 8790 9.768662 TTTTTAGACGTTCTGTTACTAAATCCT 57.231 29.630 0.00 0.00 34.54 3.24
1971 8791 9.803130 GTTTTTAGACGTTCTGTTACTAAATCC 57.197 33.333 0.00 0.00 34.54 3.01
1981 8801 9.292846 GGTTAAAAATGTTTTTAGACGTTCTGT 57.707 29.630 9.75 0.00 41.85 3.41
1982 8802 8.466026 CGGTTAAAAATGTTTTTAGACGTTCTG 58.534 33.333 18.04 7.89 41.85 3.02
1983 8803 8.397148 TCGGTTAAAAATGTTTTTAGACGTTCT 58.603 29.630 21.57 0.00 41.85 3.01
1984 8804 8.545749 TCGGTTAAAAATGTTTTTAGACGTTC 57.454 30.769 21.57 9.23 41.85 3.95
1985 8805 9.172820 GATCGGTTAAAAATGTTTTTAGACGTT 57.827 29.630 21.57 17.60 41.85 3.99
1986 8806 7.804600 GGATCGGTTAAAAATGTTTTTAGACGT 59.195 33.333 21.57 0.00 41.85 4.34
1987 8807 7.271868 GGGATCGGTTAAAAATGTTTTTAGACG 59.728 37.037 19.13 19.13 41.85 4.18
1988 8808 7.543172 GGGGATCGGTTAAAAATGTTTTTAGAC 59.457 37.037 9.75 10.47 41.85 2.59
1989 8809 7.452189 AGGGGATCGGTTAAAAATGTTTTTAGA 59.548 33.333 9.75 6.05 41.85 2.10
1990 8810 7.608153 AGGGGATCGGTTAAAAATGTTTTTAG 58.392 34.615 9.75 1.81 41.85 1.85
1991 8811 7.541916 AGGGGATCGGTTAAAAATGTTTTTA 57.458 32.000 6.59 6.59 40.53 1.52
1992 8812 6.428083 AGGGGATCGGTTAAAAATGTTTTT 57.572 33.333 8.36 8.36 42.51 1.94
1993 8813 7.727578 ATAGGGGATCGGTTAAAAATGTTTT 57.272 32.000 0.00 0.00 0.00 2.43
1994 8814 8.689061 GTTATAGGGGATCGGTTAAAAATGTTT 58.311 33.333 0.00 0.00 0.00 2.83
1995 8815 7.286087 GGTTATAGGGGATCGGTTAAAAATGTT 59.714 37.037 0.00 0.00 0.00 2.71
1996 8816 6.774170 GGTTATAGGGGATCGGTTAAAAATGT 59.226 38.462 0.00 0.00 0.00 2.71
1997 8817 6.072893 CGGTTATAGGGGATCGGTTAAAAATG 60.073 42.308 0.00 0.00 0.00 2.32
1998 8818 5.999600 CGGTTATAGGGGATCGGTTAAAAAT 59.000 40.000 0.00 0.00 0.00 1.82
1999 8819 5.367302 CGGTTATAGGGGATCGGTTAAAAA 58.633 41.667 0.00 0.00 0.00 1.94
2000 8820 4.202346 CCGGTTATAGGGGATCGGTTAAAA 60.202 45.833 0.00 0.00 33.63 1.52
2001 8821 3.324556 CCGGTTATAGGGGATCGGTTAAA 59.675 47.826 0.00 0.00 33.63 1.52
2002 8822 2.899256 CCGGTTATAGGGGATCGGTTAA 59.101 50.000 0.00 0.00 33.63 2.01
2003 8823 2.158325 ACCGGTTATAGGGGATCGGTTA 60.158 50.000 0.00 0.00 46.97 2.85
2004 8824 1.345063 CCGGTTATAGGGGATCGGTT 58.655 55.000 0.00 0.00 33.63 4.44
2005 8825 0.189327 ACCGGTTATAGGGGATCGGT 59.811 55.000 0.00 0.00 44.72 4.69
2006 8826 1.345063 AACCGGTTATAGGGGATCGG 58.655 55.000 20.78 0.00 42.69 4.18
2007 8827 3.424703 TCTAACCGGTTATAGGGGATCG 58.575 50.000 26.70 12.15 0.00 3.69
2008 8828 5.813513 TTTCTAACCGGTTATAGGGGATC 57.186 43.478 26.70 0.00 0.00 3.36
2009 8829 5.668991 ACTTTTCTAACCGGTTATAGGGGAT 59.331 40.000 26.70 8.16 0.00 3.85
2010 8830 5.032170 ACTTTTCTAACCGGTTATAGGGGA 58.968 41.667 26.70 16.99 0.00 4.81
2011 8831 5.363562 ACTTTTCTAACCGGTTATAGGGG 57.636 43.478 26.70 14.96 0.00 4.79
2012 8832 8.791327 TTTAACTTTTCTAACCGGTTATAGGG 57.209 34.615 26.70 15.32 0.00 3.53
2013 8833 9.440773 ACTTTAACTTTTCTAACCGGTTATAGG 57.559 33.333 26.70 15.68 31.07 2.57
2015 8835 8.720562 GCACTTTAACTTTTCTAACCGGTTATA 58.279 33.333 26.70 17.49 0.00 0.98
2016 8836 7.229106 TGCACTTTAACTTTTCTAACCGGTTAT 59.771 33.333 26.70 12.96 0.00 1.89
2017 8837 6.541641 TGCACTTTAACTTTTCTAACCGGTTA 59.458 34.615 25.09 25.09 0.00 2.85
2018 8838 5.357596 TGCACTTTAACTTTTCTAACCGGTT 59.642 36.000 25.64 25.64 0.00 4.44
2019 8839 4.883006 TGCACTTTAACTTTTCTAACCGGT 59.117 37.500 0.00 0.00 0.00 5.28
2020 8840 5.008316 ACTGCACTTTAACTTTTCTAACCGG 59.992 40.000 0.00 0.00 0.00 5.28
2021 8841 6.056428 ACTGCACTTTAACTTTTCTAACCG 57.944 37.500 0.00 0.00 0.00 4.44
2022 8842 8.697846 AAAACTGCACTTTAACTTTTCTAACC 57.302 30.769 0.00 0.00 0.00 2.85
2026 8846 8.957466 AGAGTAAAACTGCACTTTAACTTTTCT 58.043 29.630 0.00 0.00 0.00 2.52
2027 8847 9.569167 AAGAGTAAAACTGCACTTTAACTTTTC 57.431 29.630 0.00 0.00 0.00 2.29
2028 8848 9.569167 GAAGAGTAAAACTGCACTTTAACTTTT 57.431 29.630 12.89 4.95 0.00 2.27
2029 8849 8.957466 AGAAGAGTAAAACTGCACTTTAACTTT 58.043 29.630 12.89 4.57 0.00 2.66
2030 8850 8.507524 AGAAGAGTAAAACTGCACTTTAACTT 57.492 30.769 12.18 12.18 0.00 2.66
2031 8851 9.609346 TTAGAAGAGTAAAACTGCACTTTAACT 57.391 29.630 0.00 0.00 0.00 2.24
2032 8852 9.647679 GTTAGAAGAGTAAAACTGCACTTTAAC 57.352 33.333 0.00 0.00 0.00 2.01
2033 8853 9.386010 TGTTAGAAGAGTAAAACTGCACTTTAA 57.614 29.630 0.00 0.00 0.00 1.52
2034 8854 8.951787 TGTTAGAAGAGTAAAACTGCACTTTA 57.048 30.769 0.00 0.00 0.00 1.85
2035 8855 7.012421 CCTGTTAGAAGAGTAAAACTGCACTTT 59.988 37.037 0.00 0.00 0.00 2.66
2036 8856 6.483640 CCTGTTAGAAGAGTAAAACTGCACTT 59.516 38.462 0.00 0.00 0.00 3.16
2037 8857 5.992217 CCTGTTAGAAGAGTAAAACTGCACT 59.008 40.000 0.00 0.00 0.00 4.40
2038 8858 5.989777 TCCTGTTAGAAGAGTAAAACTGCAC 59.010 40.000 0.00 0.00 0.00 4.57
2039 8859 6.169557 TCCTGTTAGAAGAGTAAAACTGCA 57.830 37.500 0.00 0.00 0.00 4.41
2040 8860 6.073167 GGTTCCTGTTAGAAGAGTAAAACTGC 60.073 42.308 0.00 0.00 0.00 4.40
2041 8861 7.217906 AGGTTCCTGTTAGAAGAGTAAAACTG 58.782 38.462 0.00 0.00 0.00 3.16
2042 8862 7.376335 AGGTTCCTGTTAGAAGAGTAAAACT 57.624 36.000 0.00 0.00 0.00 2.66
2043 8863 8.986847 GTTAGGTTCCTGTTAGAAGAGTAAAAC 58.013 37.037 1.12 0.00 0.00 2.43
2044 8864 8.152898 GGTTAGGTTCCTGTTAGAAGAGTAAAA 58.847 37.037 1.12 0.00 0.00 1.52
2045 8865 7.524367 CGGTTAGGTTCCTGTTAGAAGAGTAAA 60.524 40.741 1.12 0.00 0.00 2.01
2046 8866 6.071728 CGGTTAGGTTCCTGTTAGAAGAGTAA 60.072 42.308 1.12 0.00 0.00 2.24
2047 8867 5.416952 CGGTTAGGTTCCTGTTAGAAGAGTA 59.583 44.000 1.12 0.00 0.00 2.59
2048 8868 4.220163 CGGTTAGGTTCCTGTTAGAAGAGT 59.780 45.833 1.12 0.00 0.00 3.24
2049 8869 4.461781 TCGGTTAGGTTCCTGTTAGAAGAG 59.538 45.833 1.12 0.00 0.00 2.85
2050 8870 4.410099 TCGGTTAGGTTCCTGTTAGAAGA 58.590 43.478 1.12 0.00 0.00 2.87
2051 8871 4.796038 TCGGTTAGGTTCCTGTTAGAAG 57.204 45.455 1.12 0.00 0.00 2.85
2052 8872 4.773674 TGATCGGTTAGGTTCCTGTTAGAA 59.226 41.667 1.12 0.00 0.00 2.10
2053 8873 4.159135 GTGATCGGTTAGGTTCCTGTTAGA 59.841 45.833 1.12 0.00 0.00 2.10
2054 8874 4.430908 GTGATCGGTTAGGTTCCTGTTAG 58.569 47.826 1.12 0.00 0.00 2.34
2055 8875 3.196254 GGTGATCGGTTAGGTTCCTGTTA 59.804 47.826 1.12 0.00 0.00 2.41
2056 8876 2.027469 GGTGATCGGTTAGGTTCCTGTT 60.027 50.000 1.12 0.00 0.00 3.16
2057 8877 1.553704 GGTGATCGGTTAGGTTCCTGT 59.446 52.381 1.12 0.00 0.00 4.00
2058 8878 1.553248 TGGTGATCGGTTAGGTTCCTG 59.447 52.381 1.12 0.00 0.00 3.86
2059 8879 1.946984 TGGTGATCGGTTAGGTTCCT 58.053 50.000 0.00 0.00 0.00 3.36
2060 8880 2.773993 TTGGTGATCGGTTAGGTTCC 57.226 50.000 0.00 0.00 0.00 3.62
2061 8881 4.569564 GTGTATTGGTGATCGGTTAGGTTC 59.430 45.833 0.00 0.00 0.00 3.62
2062 8882 4.510571 GTGTATTGGTGATCGGTTAGGTT 58.489 43.478 0.00 0.00 0.00 3.50
2063 8883 3.429822 CGTGTATTGGTGATCGGTTAGGT 60.430 47.826 0.00 0.00 0.00 3.08
2064 8884 3.120792 CGTGTATTGGTGATCGGTTAGG 58.879 50.000 0.00 0.00 0.00 2.69
2065 8885 3.777478 ACGTGTATTGGTGATCGGTTAG 58.223 45.455 0.00 0.00 0.00 2.34
2066 8886 3.872511 ACGTGTATTGGTGATCGGTTA 57.127 42.857 0.00 0.00 0.00 2.85
2067 8887 2.754946 ACGTGTATTGGTGATCGGTT 57.245 45.000 0.00 0.00 0.00 4.44
2068 8888 2.754946 AACGTGTATTGGTGATCGGT 57.245 45.000 0.00 0.00 0.00 4.69
2069 8889 3.550275 CACTAACGTGTATTGGTGATCGG 59.450 47.826 0.00 0.00 42.05 4.18
2070 8890 3.550275 CCACTAACGTGTATTGGTGATCG 59.450 47.826 3.33 0.00 42.05 3.69
2071 8891 4.751060 TCCACTAACGTGTATTGGTGATC 58.249 43.478 3.33 0.00 42.05 2.92
2072 8892 4.222145 ACTCCACTAACGTGTATTGGTGAT 59.778 41.667 15.85 5.37 42.05 3.06
2073 8893 3.575256 ACTCCACTAACGTGTATTGGTGA 59.425 43.478 15.85 1.26 42.05 4.02
2074 8894 3.921677 ACTCCACTAACGTGTATTGGTG 58.078 45.455 0.00 2.28 39.91 4.17
2075 8895 5.477984 TCTTACTCCACTAACGTGTATTGGT 59.522 40.000 0.00 0.00 39.55 3.67
2076 8896 5.957798 TCTTACTCCACTAACGTGTATTGG 58.042 41.667 0.00 0.00 39.55 3.16
2077 8897 7.878477 TTTCTTACTCCACTAACGTGTATTG 57.122 36.000 0.00 0.00 39.55 1.90
2078 8898 9.498176 AAATTTCTTACTCCACTAACGTGTATT 57.502 29.630 0.00 0.00 39.55 1.89
2080 8900 9.410556 GTAAATTTCTTACTCCACTAACGTGTA 57.589 33.333 0.00 0.00 39.55 2.90
2081 8901 8.146412 AGTAAATTTCTTACTCCACTAACGTGT 58.854 33.333 0.00 0.00 39.55 4.49
2082 8902 8.530269 AGTAAATTTCTTACTCCACTAACGTG 57.470 34.615 0.00 0.00 40.89 4.49
2083 8903 7.540055 CGAGTAAATTTCTTACTCCACTAACGT 59.460 37.037 15.53 0.00 44.84 3.99
2084 8904 7.008992 CCGAGTAAATTTCTTACTCCACTAACG 59.991 40.741 15.53 6.09 44.84 3.18
2085 8905 8.031277 TCCGAGTAAATTTCTTACTCCACTAAC 58.969 37.037 15.53 0.00 44.84 2.34
2086 8906 8.031277 GTCCGAGTAAATTTCTTACTCCACTAA 58.969 37.037 15.53 0.00 44.84 2.24
2087 8907 7.177216 TGTCCGAGTAAATTTCTTACTCCACTA 59.823 37.037 15.53 2.42 44.84 2.74
2088 8908 6.014840 TGTCCGAGTAAATTTCTTACTCCACT 60.015 38.462 15.53 0.85 44.84 4.00
2089 8909 6.090493 GTGTCCGAGTAAATTTCTTACTCCAC 59.910 42.308 15.53 13.88 44.84 4.02
2090 8910 6.161381 GTGTCCGAGTAAATTTCTTACTCCA 58.839 40.000 15.53 7.96 44.84 3.86
2091 8911 5.579904 GGTGTCCGAGTAAATTTCTTACTCC 59.420 44.000 15.53 6.01 44.84 3.85
2109 8929 4.965119 AATAAGAAGATTTGCGGTGTCC 57.035 40.909 0.00 0.00 0.00 4.02
2110 8930 8.021396 AGTAAAAATAAGAAGATTTGCGGTGTC 58.979 33.333 0.00 0.00 0.00 3.67
2112 8932 7.484959 GGAGTAAAAATAAGAAGATTTGCGGTG 59.515 37.037 0.00 0.00 0.00 4.94
2114 8934 7.484959 GTGGAGTAAAAATAAGAAGATTTGCGG 59.515 37.037 0.00 0.00 0.00 5.69
2115 8935 8.237267 AGTGGAGTAAAAATAAGAAGATTTGCG 58.763 33.333 0.00 0.00 0.00 4.85
2118 8938 9.301897 AGCAGTGGAGTAAAAATAAGAAGATTT 57.698 29.630 0.00 0.00 0.00 2.17
2120 8940 7.278868 CGAGCAGTGGAGTAAAAATAAGAAGAT 59.721 37.037 0.00 0.00 0.00 2.40
2121 8941 6.590292 CGAGCAGTGGAGTAAAAATAAGAAGA 59.410 38.462 0.00 0.00 0.00 2.87
2122 8942 6.183360 CCGAGCAGTGGAGTAAAAATAAGAAG 60.183 42.308 0.00 0.00 0.00 2.85
2125 8945 4.201822 GCCGAGCAGTGGAGTAAAAATAAG 60.202 45.833 0.00 0.00 0.00 1.73
2131 8951 1.080093 CGCCGAGCAGTGGAGTAAA 60.080 57.895 0.00 0.00 0.00 2.01
2133 8953 3.449227 CCGCCGAGCAGTGGAGTA 61.449 66.667 0.00 0.00 39.99 2.59
2140 8960 2.835701 TTTACTCAGCCGCCGAGCAG 62.836 60.000 3.38 0.00 33.58 4.24
2141 8961 2.443260 TTTTACTCAGCCGCCGAGCA 62.443 55.000 3.38 0.00 33.58 4.26
2142 8962 1.740296 TTTTACTCAGCCGCCGAGC 60.740 57.895 3.38 0.00 33.58 5.03
2144 8964 0.034337 AAGTTTTACTCAGCCGCCGA 59.966 50.000 0.00 0.00 0.00 5.54
2146 8966 1.732809 GAGAAGTTTTACTCAGCCGCC 59.267 52.381 0.00 0.00 33.86 6.13
2148 8968 3.254892 GGAGAGAAGTTTTACTCAGCCG 58.745 50.000 0.00 0.00 35.83 5.52
2149 8969 3.262151 AGGGAGAGAAGTTTTACTCAGCC 59.738 47.826 0.00 0.00 35.83 4.85
2150 8970 4.221924 AGAGGGAGAGAAGTTTTACTCAGC 59.778 45.833 0.00 0.00 35.83 4.26
2151 8971 5.714806 AGAGAGGGAGAGAAGTTTTACTCAG 59.285 44.000 0.00 0.00 35.83 3.35
2152 8972 5.646215 AGAGAGGGAGAGAAGTTTTACTCA 58.354 41.667 0.00 0.00 35.83 3.41
2153 8973 5.949952 AGAGAGAGGGAGAGAAGTTTTACTC 59.050 44.000 0.00 0.00 0.00 2.59
2155 8975 6.350696 GGAAGAGAGAGGGAGAGAAGTTTTAC 60.351 46.154 0.00 0.00 0.00 2.01
2157 8977 4.530553 GGAAGAGAGAGGGAGAGAAGTTTT 59.469 45.833 0.00 0.00 0.00 2.43
2158 8978 4.093743 GGAAGAGAGAGGGAGAGAAGTTT 58.906 47.826 0.00 0.00 0.00 2.66
2159 8979 3.336694 AGGAAGAGAGAGGGAGAGAAGTT 59.663 47.826 0.00 0.00 0.00 2.66
2160 8980 2.926329 AGGAAGAGAGAGGGAGAGAAGT 59.074 50.000 0.00 0.00 0.00 3.01
2162 8982 3.197983 AGAGGAAGAGAGAGGGAGAGAA 58.802 50.000 0.00 0.00 0.00 2.87
2163 8983 2.777692 GAGAGGAAGAGAGAGGGAGAGA 59.222 54.545 0.00 0.00 0.00 3.10
2165 8985 1.850345 GGAGAGGAAGAGAGAGGGAGA 59.150 57.143 0.00 0.00 0.00 3.71
2166 8986 1.852965 AGGAGAGGAAGAGAGAGGGAG 59.147 57.143 0.00 0.00 0.00 4.30
2167 8987 1.850345 GAGGAGAGGAAGAGAGAGGGA 59.150 57.143 0.00 0.00 0.00 4.20
2168 8988 1.852965 AGAGGAGAGGAAGAGAGAGGG 59.147 57.143 0.00 0.00 0.00 4.30
2169 8989 2.936202 CAGAGGAGAGGAAGAGAGAGG 58.064 57.143 0.00 0.00 0.00 3.69
2170 8990 2.301346 GCAGAGGAGAGGAAGAGAGAG 58.699 57.143 0.00 0.00 0.00 3.20
2171 8991 1.064017 GGCAGAGGAGAGGAAGAGAGA 60.064 57.143 0.00 0.00 0.00 3.10
2174 8994 1.402787 GAGGCAGAGGAGAGGAAGAG 58.597 60.000 0.00 0.00 0.00 2.85
2176 8996 0.032217 AGGAGGCAGAGGAGAGGAAG 60.032 60.000 0.00 0.00 0.00 3.46
2177 8997 0.032615 GAGGAGGCAGAGGAGAGGAA 60.033 60.000 0.00 0.00 0.00 3.36
2178 8998 0.923729 AGAGGAGGCAGAGGAGAGGA 60.924 60.000 0.00 0.00 0.00 3.71
2179 8999 0.032217 AAGAGGAGGCAGAGGAGAGG 60.032 60.000 0.00 0.00 0.00 3.69
2180 9000 1.063717 AGAAGAGGAGGCAGAGGAGAG 60.064 57.143 0.00 0.00 0.00 3.20
2182 9002 1.113788 CAGAAGAGGAGGCAGAGGAG 58.886 60.000 0.00 0.00 0.00 3.69
2183 9003 0.411452 ACAGAAGAGGAGGCAGAGGA 59.589 55.000 0.00 0.00 0.00 3.71
2184 9004 0.823460 GACAGAAGAGGAGGCAGAGG 59.177 60.000 0.00 0.00 0.00 3.69
2186 9006 2.106566 GATGACAGAAGAGGAGGCAGA 58.893 52.381 0.00 0.00 0.00 4.26
2189 9009 0.529555 GCGATGACAGAAGAGGAGGC 60.530 60.000 0.00 0.00 0.00 4.70
2190 9010 0.103937 GGCGATGACAGAAGAGGAGG 59.896 60.000 0.00 0.00 0.00 4.30
2191 9011 0.103937 GGGCGATGACAGAAGAGGAG 59.896 60.000 0.00 0.00 0.00 3.69
2192 9012 1.330655 GGGGCGATGACAGAAGAGGA 61.331 60.000 0.00 0.00 0.00 3.71
2196 9016 2.892425 GCGGGGCGATGACAGAAG 60.892 66.667 0.00 0.00 0.00 2.85
2197 9017 4.467084 GGCGGGGCGATGACAGAA 62.467 66.667 0.00 0.00 0.00 3.02
2227 9047 4.785453 GACAGCGGGAAGGGCAGG 62.785 72.222 0.00 0.00 0.00 4.85
2228 9048 4.785453 GGACAGCGGGAAGGGCAG 62.785 72.222 0.00 0.00 0.00 4.85
2232 9052 3.787001 GAGGGGACAGCGGGAAGG 61.787 72.222 0.00 0.00 0.00 3.46
2233 9053 2.685380 AGAGGGGACAGCGGGAAG 60.685 66.667 0.00 0.00 0.00 3.46
2234 9054 2.683933 GAGAGGGGACAGCGGGAA 60.684 66.667 0.00 0.00 0.00 3.97
2235 9055 4.779733 GGAGAGGGGACAGCGGGA 62.780 72.222 0.00 0.00 0.00 5.14
2236 9056 4.787280 AGGAGAGGGGACAGCGGG 62.787 72.222 0.00 0.00 0.00 6.13
2238 9058 3.151022 GGAGGAGAGGGGACAGCG 61.151 72.222 0.00 0.00 0.00 5.18
2239 9059 2.766229 GGGAGGAGAGGGGACAGC 60.766 72.222 0.00 0.00 0.00 4.40
2240 9060 0.327000 ATTGGGAGGAGAGGGGACAG 60.327 60.000 0.00 0.00 0.00 3.51
2241 9061 0.621571 CATTGGGAGGAGAGGGGACA 60.622 60.000 0.00 0.00 0.00 4.02
2242 9062 1.348775 CCATTGGGAGGAGAGGGGAC 61.349 65.000 0.00 0.00 35.59 4.46
2243 9063 1.004758 CCATTGGGAGGAGAGGGGA 59.995 63.158 0.00 0.00 35.59 4.81
2244 9064 2.761465 GCCATTGGGAGGAGAGGGG 61.761 68.421 4.53 0.00 35.59 4.79
2245 9065 2.761465 GGCCATTGGGAGGAGAGGG 61.761 68.421 4.53 0.00 35.59 4.30
2246 9066 2.922234 GGCCATTGGGAGGAGAGG 59.078 66.667 4.53 0.00 35.59 3.69
2247 9067 2.507944 CGGCCATTGGGAGGAGAG 59.492 66.667 2.24 0.00 35.59 3.20
2249 9069 2.615227 CTTCCGGCCATTGGGAGGAG 62.615 65.000 2.24 0.00 41.50 3.69
2250 9070 2.612430 TTCCGGCCATTGGGAGGA 60.612 61.111 2.24 0.00 39.69 3.71
2251 9071 2.124151 CTTCCGGCCATTGGGAGG 60.124 66.667 2.24 0.00 35.59 4.30
2252 9072 2.830370 GCTTCCGGCCATTGGGAG 60.830 66.667 2.24 0.34 34.98 4.30
2264 9084 2.299503 GACCTCTAGCCACCGCTTCC 62.300 65.000 0.00 0.00 45.55 3.46
2265 9085 1.142097 GACCTCTAGCCACCGCTTC 59.858 63.158 0.00 0.00 45.55 3.86
2266 9086 1.305381 AGACCTCTAGCCACCGCTT 60.305 57.895 0.00 0.00 45.55 4.68
2269 9089 2.482333 CGGAGACCTCTAGCCACCG 61.482 68.421 0.00 0.00 0.00 4.94
2270 9090 2.787567 GCGGAGACCTCTAGCCACC 61.788 68.421 0.00 0.00 0.00 4.61
2272 9092 2.442272 GGCGGAGACCTCTAGCCA 60.442 66.667 22.20 0.00 45.42 4.75
2273 9093 3.597728 CGGCGGAGACCTCTAGCC 61.598 72.222 19.34 19.34 43.97 3.93
2274 9094 4.273257 GCGGCGGAGACCTCTAGC 62.273 72.222 9.78 8.63 34.39 3.42
2275 9095 3.955101 CGCGGCGGAGACCTCTAG 61.955 72.222 15.84 0.00 0.00 2.43
2330 10191 2.486042 GAGAGACCGGCGACAGAC 59.514 66.667 9.30 0.00 0.00 3.51
2331 10192 3.125573 CGAGAGACCGGCGACAGA 61.126 66.667 9.30 0.00 0.00 3.41
2333 10194 3.125573 CTCGAGAGACCGGCGACA 61.126 66.667 9.30 0.00 35.39 4.35
2334 10195 4.539881 GCTCGAGAGACCGGCGAC 62.540 72.222 18.75 1.53 35.39 5.19
2340 10201 3.878519 CCGACGGCTCGAGAGACC 61.879 72.222 18.75 7.09 43.06 3.85
2341 10202 4.539881 GCCGACGGCTCGAGAGAC 62.540 72.222 31.30 8.58 46.69 3.36
2362 10223 4.424711 GCGTGGAAGGGCATGGGA 62.425 66.667 0.00 0.00 0.00 4.37
2371 10232 2.701163 GATAGGGAGCGGCGTGGAAG 62.701 65.000 9.37 0.00 0.00 3.46
2372 10233 2.762459 ATAGGGAGCGGCGTGGAA 60.762 61.111 9.37 0.00 0.00 3.53
2374 10235 4.301027 GGATAGGGAGCGGCGTGG 62.301 72.222 9.37 0.00 0.00 4.94
2377 10238 3.686045 GGAGGATAGGGAGCGGCG 61.686 72.222 0.51 0.51 0.00 6.46
2378 10239 3.315140 GGGAGGATAGGGAGCGGC 61.315 72.222 0.00 0.00 0.00 6.53
2379 10240 0.838122 ATTGGGAGGATAGGGAGCGG 60.838 60.000 0.00 0.00 0.00 5.52
2381 10242 0.695347 CCATTGGGAGGATAGGGAGC 59.305 60.000 0.00 0.00 35.59 4.70
2382 10243 1.981495 GTCCATTGGGAGGATAGGGAG 59.019 57.143 2.09 0.00 46.12 4.30
2390 10251 1.452108 GCTTCCGTCCATTGGGAGG 60.452 63.158 2.09 6.92 46.12 4.30
2393 10254 2.824041 CCGCTTCCGTCCATTGGG 60.824 66.667 2.09 0.00 0.00 4.12
2394 10255 2.046314 ACCGCTTCCGTCCATTGG 60.046 61.111 0.00 0.00 0.00 3.16
2395 10256 2.398554 CCACCGCTTCCGTCCATTG 61.399 63.158 0.00 0.00 0.00 2.82
2396 10257 2.046314 CCACCGCTTCCGTCCATT 60.046 61.111 0.00 0.00 0.00 3.16
2397 10258 4.778143 GCCACCGCTTCCGTCCAT 62.778 66.667 0.00 0.00 0.00 3.41
2403 10264 4.785453 CCTCTGGCCACCGCTTCC 62.785 72.222 0.00 0.00 34.44 3.46
2404 10265 3.959991 GACCTCTGGCCACCGCTTC 62.960 68.421 0.00 0.00 34.44 3.86
2407 10268 4.459089 GAGACCTCTGGCCACCGC 62.459 72.222 0.00 0.00 0.00 5.68
2408 10269 3.775654 GGAGACCTCTGGCCACCG 61.776 72.222 0.00 0.00 0.00 4.94
2409 10270 3.775654 CGGAGACCTCTGGCCACC 61.776 72.222 0.00 0.00 32.43 4.61
2429 10290 4.819761 TCTGTGCAGCGGATCGGC 62.820 66.667 16.92 16.92 36.38 5.54
2430 10291 1.953138 GATCTGTGCAGCGGATCGG 60.953 63.158 16.93 0.00 46.42 4.18
2433 10294 2.107750 CGGATCTGTGCAGCGGAT 59.892 61.111 9.49 9.49 45.41 4.18
2434 10295 4.819761 GCGGATCTGTGCAGCGGA 62.820 66.667 2.89 0.00 36.82 5.54
2437 10298 4.479993 AGGGCGGATCTGTGCAGC 62.480 66.667 2.89 0.00 0.00 5.25
2438 10299 2.513204 CAGGGCGGATCTGTGCAG 60.513 66.667 2.89 0.00 0.00 4.41
2439 10300 4.783621 GCAGGGCGGATCTGTGCA 62.784 66.667 10.01 0.00 34.89 4.57
2441 10302 4.100084 TGGCAGGGCGGATCTGTG 62.100 66.667 2.89 0.00 34.89 3.66
2442 10303 4.101448 GTGGCAGGGCGGATCTGT 62.101 66.667 2.89 0.00 34.89 3.41
2461 10322 3.461773 AGACGATGACCTGCGGGG 61.462 66.667 18.00 5.11 41.89 5.73
2462 10323 2.202797 CAGACGATGACCTGCGGG 60.203 66.667 11.02 11.02 38.88 6.13
2463 10324 2.887568 GCAGACGATGACCTGCGG 60.888 66.667 0.00 0.00 44.99 5.69
2475 10336 4.863925 GAGAGAGCGGCGGCAGAC 62.864 72.222 19.21 9.21 43.41 3.51
2504 10365 4.424711 TGGAAGGGCATGGGACGC 62.425 66.667 0.00 0.00 0.00 5.19
2505 10366 2.438434 GTGGAAGGGCATGGGACG 60.438 66.667 0.00 0.00 0.00 4.79
2506 10367 2.438434 CGTGGAAGGGCATGGGAC 60.438 66.667 0.00 0.00 0.00 4.46
2516 10377 4.821589 GAGGGAGCGGCGTGGAAG 62.822 72.222 9.37 0.00 0.00 3.46
2524 10385 4.465446 TGGGAGGAGAGGGAGCGG 62.465 72.222 0.00 0.00 0.00 5.52
2525 10386 2.837291 CTGGGAGGAGAGGGAGCG 60.837 72.222 0.00 0.00 0.00 5.03
2526 10387 2.063378 CACTGGGAGGAGAGGGAGC 61.063 68.421 0.00 0.00 0.00 4.70
2527 10388 1.382420 CCACTGGGAGGAGAGGGAG 60.382 68.421 0.00 0.00 35.59 4.30
2528 10389 2.780693 CCACTGGGAGGAGAGGGA 59.219 66.667 0.00 0.00 35.59 4.20
2529 10390 3.086600 GCCACTGGGAGGAGAGGG 61.087 72.222 0.00 0.00 35.59 4.30
2530 10391 3.086600 GGCCACTGGGAGGAGAGG 61.087 72.222 0.00 0.00 35.59 3.69
2552 10413 4.554036 GAGACCCCTGGCCATCGC 62.554 72.222 5.51 0.00 0.00 4.58
2553 10414 3.866582 GGAGACCCCTGGCCATCG 61.867 72.222 5.51 0.00 0.00 3.84
2554 10415 3.866582 CGGAGACCCCTGGCCATC 61.867 72.222 5.51 0.00 0.00 3.51
2559 10420 3.775654 GACAGCGGAGACCCCTGG 61.776 72.222 7.26 0.00 36.00 4.45
2561 10422 3.663815 ATCGACAGCGGAGACCCCT 62.664 63.158 0.00 0.00 38.28 4.79
2563 10424 1.227002 GAATCGACAGCGGAGACCC 60.227 63.158 0.00 0.00 38.28 4.46
2564 10425 1.227002 GGAATCGACAGCGGAGACC 60.227 63.158 0.00 0.00 38.28 3.85
2565 10426 1.227002 GGGAATCGACAGCGGAGAC 60.227 63.158 0.00 0.00 38.28 3.36
2566 10427 1.667154 CTGGGAATCGACAGCGGAGA 61.667 60.000 0.00 0.00 38.28 3.71
2567 10428 1.227089 CTGGGAATCGACAGCGGAG 60.227 63.158 0.00 0.00 38.28 4.63
2568 10429 2.892640 CTGGGAATCGACAGCGGA 59.107 61.111 0.00 0.00 38.28 5.54
2574 10435 0.811616 AATCTGCGCTGGGAATCGAC 60.812 55.000 14.70 0.00 0.00 4.20
2575 10436 0.530650 GAATCTGCGCTGGGAATCGA 60.531 55.000 14.70 0.00 0.00 3.59
2578 10439 1.091771 CACGAATCTGCGCTGGGAAT 61.092 55.000 14.70 0.24 33.86 3.01
2579 10440 1.741401 CACGAATCTGCGCTGGGAA 60.741 57.895 14.70 0.00 33.86 3.97
2580 10441 2.125552 CACGAATCTGCGCTGGGA 60.126 61.111 14.70 7.56 33.86 4.37
2582 10443 2.301902 GAAGCACGAATCTGCGCTGG 62.302 60.000 14.70 4.50 42.42 4.85
2583 10444 1.059994 GAAGCACGAATCTGCGCTG 59.940 57.895 9.73 8.88 42.42 5.18
2584 10445 2.103042 GGAAGCACGAATCTGCGCT 61.103 57.895 9.73 0.00 42.42 5.92
2585 10446 1.709147 ATGGAAGCACGAATCTGCGC 61.709 55.000 0.00 0.00 42.42 6.09
2587 10448 0.248377 GCATGGAAGCACGAATCTGC 60.248 55.000 0.00 0.00 37.44 4.26
2588 10449 0.379669 GGCATGGAAGCACGAATCTG 59.620 55.000 0.00 0.00 35.83 2.90
2589 10450 0.254178 AGGCATGGAAGCACGAATCT 59.746 50.000 0.00 0.00 35.83 2.40
2590 10451 0.379669 CAGGCATGGAAGCACGAATC 59.620 55.000 0.00 0.00 35.83 2.52
2591 10452 1.660560 GCAGGCATGGAAGCACGAAT 61.661 55.000 0.00 0.00 35.83 3.34
2592 10453 2.334946 GCAGGCATGGAAGCACGAA 61.335 57.895 0.00 0.00 35.83 3.85
2594 10455 2.537792 CTTGCAGGCATGGAAGCACG 62.538 60.000 19.51 0.00 46.10 5.34
2600 11772 1.375908 GACGACTTGCAGGCATGGA 60.376 57.895 0.00 0.00 0.00 3.41
2602 11774 2.780643 CGACGACTTGCAGGCATG 59.219 61.111 0.00 0.00 0.00 4.06
2623 11795 2.048127 ACTTGAGGAAGCGTCGGC 60.048 61.111 0.00 0.00 40.37 5.54
2624 11796 1.801913 CGACTTGAGGAAGCGTCGG 60.802 63.158 0.00 0.00 43.80 4.79
2626 11798 2.095252 GGCGACTTGAGGAAGCGTC 61.095 63.158 0.00 0.00 33.76 5.19
2627 11799 2.048127 GGCGACTTGAGGAAGCGT 60.048 61.111 0.00 0.00 33.76 5.07
2628 11800 1.807573 GAGGCGACTTGAGGAAGCG 60.808 63.158 0.00 0.00 44.43 4.68
2630 11802 1.153745 CGGAGGCGACTTGAGGAAG 60.154 63.158 0.00 0.00 44.43 3.46
2631 11803 0.970937 ATCGGAGGCGACTTGAGGAA 60.971 55.000 0.00 0.00 44.43 3.36
2632 11804 1.379977 ATCGGAGGCGACTTGAGGA 60.380 57.895 0.00 0.00 44.43 3.71
2633 11805 1.066587 GATCGGAGGCGACTTGAGG 59.933 63.158 0.00 0.00 44.43 3.86
2635 11807 2.771639 CGGATCGGAGGCGACTTGA 61.772 63.158 0.00 0.00 44.43 3.02
2636 11808 2.278857 CGGATCGGAGGCGACTTG 60.279 66.667 0.00 0.00 44.43 3.16
2637 11809 4.208686 GCGGATCGGAGGCGACTT 62.209 66.667 4.16 0.00 44.43 3.01
2642 11814 4.610714 GAAGGGCGGATCGGAGGC 62.611 72.222 4.16 2.05 0.00 4.70
2643 11815 3.930012 GGAAGGGCGGATCGGAGG 61.930 72.222 4.16 0.00 0.00 4.30
2644 11816 3.930012 GGGAAGGGCGGATCGGAG 61.930 72.222 4.16 0.00 0.00 4.63
2647 11819 4.547367 GTGGGGAAGGGCGGATCG 62.547 72.222 0.00 0.00 0.00 3.69
2654 11826 0.693092 TAGAATCGGGTGGGGAAGGG 60.693 60.000 0.00 0.00 0.00 3.95
2655 11827 0.759346 CTAGAATCGGGTGGGGAAGG 59.241 60.000 0.00 0.00 0.00 3.46
2656 11828 0.759346 CCTAGAATCGGGTGGGGAAG 59.241 60.000 0.00 0.00 0.00 3.46
2657 11829 0.340558 TCCTAGAATCGGGTGGGGAA 59.659 55.000 0.00 0.00 0.00 3.97
2658 11830 0.566176 ATCCTAGAATCGGGTGGGGA 59.434 55.000 0.00 0.00 0.00 4.81
2659 11831 1.435256 AATCCTAGAATCGGGTGGGG 58.565 55.000 0.00 0.00 0.00 4.96
2660 11832 2.224548 GGAAATCCTAGAATCGGGTGGG 60.225 54.545 0.00 0.00 0.00 4.61
2661 11833 2.224548 GGGAAATCCTAGAATCGGGTGG 60.225 54.545 0.00 0.00 35.95 4.61
2662 11834 2.548067 CGGGAAATCCTAGAATCGGGTG 60.548 54.545 0.00 0.00 35.95 4.61
2663 11835 1.692519 CGGGAAATCCTAGAATCGGGT 59.307 52.381 0.00 0.00 35.95 5.28
2664 11836 1.002087 CCGGGAAATCCTAGAATCGGG 59.998 57.143 0.00 0.00 32.23 5.14
2666 11838 2.610727 GCTCCGGGAAATCCTAGAATCG 60.611 54.545 0.00 0.00 35.95 3.34
2670 11842 1.705873 GAGCTCCGGGAAATCCTAGA 58.294 55.000 0.87 0.00 35.95 2.43
2671 11843 0.682292 GGAGCTCCGGGAAATCCTAG 59.318 60.000 19.06 0.00 35.95 3.02
2672 11844 0.763223 GGGAGCTCCGGGAAATCCTA 60.763 60.000 26.36 0.00 36.71 2.94
2675 11847 1.448069 GAGGGAGCTCCGGGAAATC 59.552 63.158 26.36 10.66 41.52 2.17
2676 11848 2.073101 GGAGGGAGCTCCGGGAAAT 61.073 63.158 26.36 7.74 41.52 2.17
2677 11849 2.687566 GGAGGGAGCTCCGGGAAA 60.688 66.667 26.36 0.00 41.52 3.13
2700 11872 3.674050 TAGGTCCTCGAGGGTGGCC 62.674 68.421 30.80 24.48 36.25 5.36
2702 11874 0.397254 ATGTAGGTCCTCGAGGGTGG 60.397 60.000 30.80 6.88 36.25 4.61
2703 11875 1.033574 GATGTAGGTCCTCGAGGGTG 58.966 60.000 30.80 6.21 36.25 4.61
2704 11876 0.465824 CGATGTAGGTCCTCGAGGGT 60.466 60.000 30.80 17.88 36.55 4.34
2705 11877 1.173444 CCGATGTAGGTCCTCGAGGG 61.173 65.000 30.80 12.84 36.55 4.30
2706 11878 1.797211 GCCGATGTAGGTCCTCGAGG 61.797 65.000 26.32 26.32 36.55 4.63
2707 11879 1.655329 GCCGATGTAGGTCCTCGAG 59.345 63.158 5.13 5.13 36.55 4.04
2708 11880 2.184830 CGCCGATGTAGGTCCTCGA 61.185 63.158 0.00 0.00 36.55 4.04
2709 11881 2.001361 AACGCCGATGTAGGTCCTCG 62.001 60.000 0.00 0.00 34.77 4.63
2710 11882 0.175073 AAACGCCGATGTAGGTCCTC 59.825 55.000 0.00 0.00 0.00 3.71
2711 11883 0.108329 CAAACGCCGATGTAGGTCCT 60.108 55.000 0.00 0.00 0.00 3.85
2712 11884 1.087771 CCAAACGCCGATGTAGGTCC 61.088 60.000 0.00 0.00 0.00 4.46
2713 11885 1.702491 GCCAAACGCCGATGTAGGTC 61.702 60.000 0.00 0.00 0.00 3.85
2714 11886 1.743995 GCCAAACGCCGATGTAGGT 60.744 57.895 0.00 0.00 0.00 3.08
2715 11887 1.705337 CTGCCAAACGCCGATGTAGG 61.705 60.000 0.00 0.00 36.24 3.18
2716 11888 1.715585 CTGCCAAACGCCGATGTAG 59.284 57.895 0.00 0.00 36.24 2.74
2717 11889 2.395360 GCTGCCAAACGCCGATGTA 61.395 57.895 0.00 0.00 36.24 2.29
2718 11890 3.737172 GCTGCCAAACGCCGATGT 61.737 61.111 0.00 0.00 36.24 3.06
2719 11891 4.817063 CGCTGCCAAACGCCGATG 62.817 66.667 0.00 0.00 36.24 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.