AutoCloner

Multiple sequence alignment - TraesCS2B01G085200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G085200	chr2B	100.000	6342	0	0	1	6342	47532032	47538373	0.000000e+00	11712.0
1	TraesCS2B01G085200	chr2B	100.000	2854	0	0	6767	9620	47538798	47541651	0.000000e+00	5271.0
2	TraesCS2B01G085200	chr2B	93.550	1845	86	11	2933	4746	47637490	47639332	0.000000e+00	2717.0
3	TraesCS2B01G085200	chr2B	92.944	1488	81	17	420	1892	47635521	47636999	0.000000e+00	2145.0
4	TraesCS2B01G085200	chr2B	95.156	1342	45	7	7844	9177	47640082	47641411	0.000000e+00	2100.0
5	TraesCS2B01G085200	chr2B	93.954	827	46	4	6971	7794	47639261	47640086	0.000000e+00	1247.0
6	TraesCS2B01G085200	chr2B	91.216	444	31	2	9177	9620	47641445	47641880	1.790000e-166	597.0
7	TraesCS2B01G085200	chr2B	97.654	341	8	0	89	429	47634989	47635329	3.870000e-163	586.0
8	TraesCS2B01G085200	chr2B	82.589	448	32	24	2285	2697	47637050	47637486	4.270000e-93	353.0
9	TraesCS2B01G085200	chr2B	95.918	98	3	1	2	99	727552551	727552647	3.600000e-34	158.0
10	TraesCS2B01G085200	chr2B	96.552	87	3	0	3215	3301	798196676	798196762	2.800000e-30	145.0
11	TraesCS2B01G085200	chr2B	94.624	93	4	1	3215	3306	620595342	620595250	1.010000e-29	143.0
12	TraesCS2B01G085200	chr2B	95.455	88	4	0	3216	3303	488199350	488199263	3.620000e-29	141.0
13	TraesCS2B01G085200	chr2B	87.324	71	7	2	3242	3310	747505953	747505883	8.010000e-11	80.5
14	TraesCS2B01G085200	chr2B	84.810	79	9	2	2539	2617	374266139	374266214	1.040000e-09	76.8
15	TraesCS2B01G085200	chr2A	92.758	2237	127	8	6952	9177	31831362	31833574	0.000000e+00	3201.0
16	TraesCS2B01G085200	chr2A	91.713	1424	105	10	3299	4713	31829974	31831393	0.000000e+00	1964.0
17	TraesCS2B01G085200	chr2A	90.684	687	48	11	887	1559	31818938	31819622	0.000000e+00	900.0
18	TraesCS2B01G085200	chr2A	92.468	624	39	6	1308	1928	31820069	31820687	0.000000e+00	885.0
19	TraesCS2B01G085200	chr2A	91.736	605	27	7	2616	3218	31823545	31824128	0.000000e+00	819.0
20	TraesCS2B01G085200	chr2A	89.960	498	31	6	207	704	552531751	552531273	8.200000e-175	625.0
21	TraesCS2B01G085200	chr2A	86.667	465	32	4	9177	9620	31833608	31834063	1.120000e-133	488.0
22	TraesCS2B01G085200	chr2A	95.971	273	11	0	2269	2541	31823275	31823547	2.470000e-120	444.0
23	TraesCS2B01G085200	chr2A	93.182	220	12	1	209	428	552530126	552529910	4.330000e-83	320.0
24	TraesCS2B01G085200	chr2A	90.116	172	17	0	536	707	552528088	552527917	3.500000e-54	224.0
25	TraesCS2B01G085200	chr2A	94.382	89	5	0	123	211	607603969	607604057	4.690000e-28	137.0
26	TraesCS2B01G085200	chr2A	86.538	104	7	1	2285	2381	31819926	31820029	3.670000e-19	108.0
27	TraesCS2B01G085200	chr2A	85.542	83	5	7	2539	2619	89486318	89486241	8.010000e-11	80.5
28	TraesCS2B01G085200	chr2D	90.951	2144	102	24	7536	9620	29528918	29531028	0.000000e+00	2800.0
29	TraesCS2B01G085200	chr2D	86.695	1180	99	30	733	1892	29526435	29527576	0.000000e+00	1256.0
30	TraesCS2B01G085200	chr2D	92.397	605	30	5	2616	3219	29527876	29528465	0.000000e+00	848.0
31	TraesCS2B01G085200	chr2D	89.055	402	28	8	5370	5769	287839849	287840236	1.450000e-132	484.0
32	TraesCS2B01G085200	chr2D	86.468	436	19	9	3299	3702	29528462	29528889	8.870000e-120	442.0
33	TraesCS2B01G085200	chr2D	85.676	377	21	13	956	1326	29523667	29524016	5.490000e-97	366.0
34	TraesCS2B01G085200	chr2D	100.000	156	0	0	4940	5095	628290130	628289975	1.220000e-73	289.0
35	TraesCS2B01G085200	chr2D	92.063	189	11	3	1992	2179	537187729	537187914	7.410000e-66	263.0
36	TraesCS2B01G085200	chr2D	90.404	198	19	0	2285	2482	29527622	29527819	2.660000e-65	261.0
37	TraesCS2B01G085200	chr2D	91.304	69	6	0	1926	1994	428669898	428669966	2.860000e-15	95.3
38	TraesCS2B01G085200	chr2D	76.923	169	34	5	7136	7301	81810851	81810685	3.700000e-14	91.6
39	TraesCS2B01G085200	chr2D	97.500	40	1	0	3416	3455	57167199	57167160	1.730000e-07	69.4
40	TraesCS2B01G085200	chr2D	100.000	28	0	0	896	923	25590222	25590195	1.700000e-02	52.8
41	TraesCS2B01G085200	chr4B	92.240	1250	76	7	5096	6332	38583867	38582626	0.000000e+00	1751.0
42	TraesCS2B01G085200	chr4B	92.038	1256	79	7	5090	6332	150743500	150744747	0.000000e+00	1746.0
43	TraesCS2B01G085200	chr4B	95.187	187	9	0	4754	4940	38584054	38583868	7.310000e-76	296.0
44	TraesCS2B01G085200	chr4B	95.187	187	9	0	4754	4940	150743319	150743505	7.310000e-76	296.0
45	TraesCS2B01G085200	chr4B	95.726	117	4	1	5250	5366	535570508	535570393	4.590000e-43	187.0
46	TraesCS2B01G085200	chr4B	100.000	89	0	0	1	89	83917887	83917975	2.150000e-36	165.0
47	TraesCS2B01G085200	chr4B	95.161	62	3	0	5308	5369	535570488	535570427	2.210000e-16	99.0
48	TraesCS2B01G085200	chr4B	86.667	90	7	4	1925	2014	27399538	27399454	2.860000e-15	95.3
49	TraesCS2B01G085200	chr4B	86.792	53	5	2	2568	2620	497553448	497553498	3.750000e-04	58.4
50	TraesCS2B01G085200	chr1B	92.179	1253	73	13	5096	6330	47910337	47909092	0.000000e+00	1748.0
51	TraesCS2B01G085200	chr1B	89.630	270	9	9	437	706	136146044	136145794	9.320000e-85	326.0
52	TraesCS2B01G085200	chr1B	97.861	187	4	0	4754	4940	47910524	47910338	3.350000e-84	324.0
53	TraesCS2B01G085200	chr1B	80.345	290	46	11	7019	7301	16082857	16082572	9.790000e-50	209.0
54	TraesCS2B01G085200	chr1B	98.913	92	1	0	1	92	640492128	640492219	2.150000e-36	165.0
55	TraesCS2B01G085200	chr1B	78.571	210	33	9	7099	7302	16083425	16083628	2.820000e-25	128.0
56	TraesCS2B01G085200	chr1B	91.209	91	8	0	3460	3550	20587020	20587110	3.650000e-24	124.0
57	TraesCS2B01G085200	chr1B	96.774	62	2	0	5308	5369	47910158	47910097	4.750000e-18	104.0
58	TraesCS2B01G085200	chr1B	90.667	75	7	0	1920	1994	630918431	630918505	6.150000e-17	100.0
59	TraesCS2B01G085200	chr1B	92.647	68	5	0	1927	1994	332136157	332136224	2.210000e-16	99.0
60	TraesCS2B01G085200	chr1B	89.062	64	7	0	2182	2245	548898283	548898220	8.010000e-11	80.5
61	TraesCS2B01G085200	chr1B	88.060	67	7	1	3390	3455	431448369	431448303	2.880000e-10	78.7
62	TraesCS2B01G085200	chr1B	97.059	34	1	0	2587	2620	27074552	27074519	3.750000e-04	58.4
63	TraesCS2B01G085200	chr4D	90.632	918	70	8	5368	6283	216528030	216527127	0.000000e+00	1205.0
64	TraesCS2B01G085200	chr4D	96.800	500	16	0	207	706	90979321	90978822	0.000000e+00	835.0
65	TraesCS2B01G085200	chr4D	94.475	181	9	1	1994	2173	29656653	29656473	2.650000e-70	278.0
66	TraesCS2B01G085200	chr4D	92.632	190	11	3	1991	2179	35722299	35722486	4.430000e-68	270.0
67	TraesCS2B01G085200	chr4D	87.006	177	23	0	3703	3879	6899854	6900030	5.890000e-47	200.0
68	TraesCS2B01G085200	chr4D	89.062	64	5	2	2176	2238	379164284	379164346	2.880000e-10	78.7
69	TraesCS2B01G085200	chr3A	91.540	591	48	2	5751	6341	559809826	559810414	0.000000e+00	813.0
70	TraesCS2B01G085200	chr3A	95.719	327	13	1	5443	5769	559809486	559809811	8.560000e-145	525.0
71	TraesCS2B01G085200	chr3A	93.633	267	14	3	5090	5355	559802552	559802816	7.000000e-106	396.0
72	TraesCS2B01G085200	chr3A	96.257	187	7	0	4754	4940	559802371	559802557	3.370000e-79	307.0
73	TraesCS2B01G085200	chr3A	100.000	156	0	0	4940	5095	435414669	435414514	1.220000e-73	289.0
74	TraesCS2B01G085200	chr3A	100.000	90	0	0	1	90	130675802	130675891	5.980000e-37	167.0
75	TraesCS2B01G085200	chr3A	95.082	61	3	0	3395	3455	518646296	518646236	7.950000e-16	97.1
76	TraesCS2B01G085200	chr6D	92.939	524	37	0	5748	6271	264675045	264675568	0.000000e+00	763.0
77	TraesCS2B01G085200	chr6D	92.495	533	40	0	5751	6283	393647885	393647353	0.000000e+00	763.0
78	TraesCS2B01G085200	chr6D	89.604	404	27	6	5368	5769	54380561	54380951	5.190000e-137	499.0
79	TraesCS2B01G085200	chr6D	88.943	407	29	8	5368	5772	393648368	393647976	1.120000e-133	488.0
80	TraesCS2B01G085200	chr6D	92.147	191	11	4	1991	2180	72132357	72132170	5.730000e-67	267.0
81	TraesCS2B01G085200	chr6D	85.484	62	6	3	2571	2632	249994821	249994879	2.900000e-05	62.1
82	TraesCS2B01G085200	chr6D	92.308	39	1	2	2539	2576	123975151	123975188	5.000000e-03	54.7
83	TraesCS2B01G085200	chr5D	92.939	524	37	0	5748	6271	443809347	443809870	0.000000e+00	763.0
84	TraesCS2B01G085200	chr5D	90.722	194	16	2	1991	2184	348748658	348748467	3.450000e-64	257.0
85	TraesCS2B01G085200	chr5D	86.792	106	11	3	122	227	430647627	430647525	2.200000e-21	115.0
86	TraesCS2B01G085200	chr5D	90.805	87	4	3	1928	2014	320886290	320886208	7.900000e-21	113.0
87	TraesCS2B01G085200	chr5D	83.117	77	5	7	2543	2619	529771961	529772029	8.070000e-06	63.9
88	TraesCS2B01G085200	chr5B	94.012	501	30	0	207	707	214018701	214018201	0.000000e+00	760.0
89	TraesCS2B01G085200	chr5B	89.835	423	29	7	2597	3014	257333783	257334196	1.840000e-146	531.0
90	TraesCS2B01G085200	chr5B	89.598	423	30	7	2597	3014	257529872	257530285	8.560000e-145	525.0
91	TraesCS2B01G085200	chr5B	93.443	183	9	3	1993	2173	92234688	92234869	1.590000e-67	268.0
92	TraesCS2B01G085200	chr5B	92.473	186	13	1	3012	3196	257334295	257334480	2.060000e-66	265.0
93	TraesCS2B01G085200	chr5B	87.923	207	25	0	2322	2528	257333449	257333655	2.680000e-60	244.0
94	TraesCS2B01G085200	chr5B	87.923	207	25	0	2322	2528	257529537	257529743	2.680000e-60	244.0
95	TraesCS2B01G085200	chr5B	83.806	247	31	7	3703	3942	14337772	14338016	9.720000e-55	226.0
96	TraesCS2B01G085200	chr5B	88.360	189	13	2	3012	3199	257530384	257530564	1.630000e-52	219.0
97	TraesCS2B01G085200	chr5B	80.070	286	47	10	7023	7302	658463826	658463545	4.550000e-48	204.0
98	TraesCS2B01G085200	chr5B	91.667	96	7	1	123	218	523524559	523524653	2.180000e-26	132.0
99	TraesCS2B01G085200	chr5B	89.189	74	7	1	2182	2255	264287023	264286951	3.700000e-14	91.6
100	TraesCS2B01G085200	chr5B	97.222	36	1	0	89	124	214018735	214018700	2.900000e-05	62.1
101	TraesCS2B01G085200	chr5B	100.000	28	0	0	2257	2284	105763739	105763712	1.700000e-02	52.8
102	TraesCS2B01G085200	chr3D	92.748	524	38	0	5748	6271	497711547	497712070	0.000000e+00	758.0
103	TraesCS2B01G085200	chr3D	89.356	404	27	7	5368	5769	497711146	497711535	2.410000e-135	494.0
104	TraesCS2B01G085200	chr3D	92.632	190	11	3	1990	2177	506177125	506177313	4.430000e-68	270.0
105	TraesCS2B01G085200	chr3D	95.455	88	4	0	3213	3300	571465091	571465178	3.620000e-29	141.0
106	TraesCS2B01G085200	chr3D	91.209	91	8	0	122	212	3826904	3826814	3.650000e-24	124.0
107	TraesCS2B01G085200	chr6A	83.254	627	79	5	4063	4686	12075024	12074421	3.930000e-153	553.0
108	TraesCS2B01G085200	chr6A	85.625	320	32	8	3706	4022	12075336	12075028	3.350000e-84	324.0
109	TraesCS2B01G085200	chr6A	85.876	177	25	0	3703	3879	411897923	411898099	1.280000e-43	189.0
110	TraesCS2B01G085200	chr1D	89.604	404	27	6	5368	5769	113844727	113845117	5.190000e-137	499.0
111	TraesCS2B01G085200	chr1D	95.541	157	1	2	4940	5095	254483363	254483514	7.460000e-61	246.0
112	TraesCS2B01G085200	chr1D	97.500	40	1	0	3416	3455	291537124	291537085	1.730000e-07	69.4
113	TraesCS2B01G085200	chr1D	97.500	40	1	0	3416	3455	390665276	390665237	1.730000e-07	69.4
114	TraesCS2B01G085200	chr1D	90.196	51	2	3	2235	2284	468248420	468248468	8.070000e-06	63.9
115	TraesCS2B01G085200	chr7D	87.469	407	27	8	5368	5772	166365630	166365246	1.910000e-121	448.0
116	TraesCS2B01G085200	chr7D	85.870	184	25	1	3697	3879	529482738	529482555	2.740000e-45	195.0
117	TraesCS2B01G085200	chr7D	88.372	86	6	3	1929	2014	162791996	162791915	6.150000e-17	100.0
118	TraesCS2B01G085200	chr7D	88.235	85	6	3	1930	2014	220974954	220974874	2.210000e-16	99.0
119	TraesCS2B01G085200	chr7D	90.323	62	4	2	2181	2240	13035105	13035044	8.010000e-11	80.5
120	TraesCS2B01G085200	chr7D	94.737	38	2	0	2247	2284	195654073	195654110	1.040000e-04	60.2
121	TraesCS2B01G085200	chr7D	94.286	35	2	0	2250	2284	131462773	131462807	5.000000e-03	54.7
122	TraesCS2B01G085200	chr6B	87.578	322	33	6	3706	4022	19237633	19237314	5.490000e-97	366.0
123	TraesCS2B01G085200	chr6B	92.063	189	10	5	1992	2177	116820939	116821125	2.660000e-65	261.0
124	TraesCS2B01G085200	chr6B	85.106	235	32	3	4399	4630	19237012	19236778	4.490000e-58	237.0
125	TraesCS2B01G085200	chr6B	77.778	306	45	12	4063	4355	19237310	19237015	5.980000e-37	167.0
126	TraesCS2B01G085200	chr6B	96.774	93	2	1	3211	3303	6785933	6786024	4.650000e-33	154.0
127	TraesCS2B01G085200	chrUn	100.000	156	0	0	4940	5095	446839431	446839276	1.220000e-73	289.0
128	TraesCS2B01G085200	chrUn	95.541	157	1	2	4940	5095	443804740	443804589	7.460000e-61	246.0
129	TraesCS2B01G085200	chrUn	87.845	181	18	3	3702	3879	231478724	231478903	9.790000e-50	209.0
130	TraesCS2B01G085200	chrUn	87.166	187	20	3	3702	3885	244854378	244854193	9.790000e-50	209.0
131	TraesCS2B01G085200	chrUn	78.966	290	46	11	7025	7301	30124288	30124001	5.930000e-42	183.0
132	TraesCS2B01G085200	chrUn	91.935	62	4	1	2176	2237	323910793	323910853	1.720000e-12	86.1
133	TraesCS2B01G085200	chrUn	91.935	62	4	1	2176	2237	323913968	323914028	1.720000e-12	86.1
134	TraesCS2B01G085200	chrUn	91.935	62	4	1	2176	2237	391739837	391739777	1.720000e-12	86.1
135	TraesCS2B01G085200	chr3B	100.000	156	0	0	4940	5095	201499924	201500079	1.220000e-73	289.0
136	TraesCS2B01G085200	chr3B	99.359	156	1	0	4940	5095	765995027	765994872	5.690000e-72	283.0
137	TraesCS2B01G085200	chr3B	99.301	143	1	0	4940	5082	605367768	605367626	9.580000e-65	259.0
138	TraesCS2B01G085200	chr3B	97.647	85	2	0	3216	3300	719826059	719826143	7.790000e-31	147.0
139	TraesCS2B01G085200	chr3B	95.455	88	4	0	3213	3300	804117482	804117569	3.620000e-29	141.0
140	TraesCS2B01G085200	chr3B	95.238	84	4	0	115	198	270890794	270890877	6.060000e-27	134.0
141	TraesCS2B01G085200	chr3B	88.776	98	11	0	116	213	44782075	44781978	4.720000e-23	121.0
142	TraesCS2B01G085200	chr3B	89.333	75	7	1	1920	1994	547060458	547060531	1.030000e-14	93.5
143	TraesCS2B01G085200	chr3B	88.235	68	7	1	3389	3455	797128512	797128445	8.010000e-11	80.5
144	TraesCS2B01G085200	chr3B	80.488	82	9	6	2538	2619	160276575	160276649	1.000000e-03	56.5
145	TraesCS2B01G085200	chr1A	100.000	156	0	0	4940	5095	554472212	554472057	1.220000e-73	289.0
146	TraesCS2B01G085200	chr1A	79.570	279	42	8	7038	7302	583772477	583772200	1.650000e-42	185.0
147	TraesCS2B01G085200	chr1A	84.270	89	9	5	2533	2619	489569100	489569185	2.230000e-11	82.4
148	TraesCS2B01G085200	chr5A	92.553	188	13	1	4754	4940	483017729	483017916	1.590000e-67	268.0
149	TraesCS2B01G085200	chr5A	92.063	189	13	2	1992	2179	71460202	71460389	2.060000e-66	265.0
150	TraesCS2B01G085200	chr5A	95.000	120	5	1	5247	5366	483017994	483018112	4.590000e-43	187.0
151	TraesCS2B01G085200	chr5A	98.913	92	1	0	1	92	378899273	378899182	2.150000e-36	165.0
152	TraesCS2B01G085200	chr5A	84.138	145	18	5	7029	7171	545124131	545124272	1.690000e-27	135.0
153	TraesCS2B01G085200	chr5A	94.118	85	5	0	117	201	546827616	546827532	7.840000e-26	130.0
154	TraesCS2B01G085200	chr5A	89.000	100	7	4	100	198	512022279	512022375	4.720000e-23	121.0
155	TraesCS2B01G085200	chr5A	96.774	62	2	0	5308	5369	483018017	483018078	4.750000e-18	104.0
156	TraesCS2B01G085200	chr5A	95.000	60	2	1	5270	5329	483018054	483018112	1.030000e-14	93.5
157	TraesCS2B01G085200	chr5A	86.567	67	9	0	2176	2242	678281265	678281331	3.730000e-09	75.0
158	TraesCS2B01G085200	chr7B	77.802	455	85	8	254	706	270529838	270530278	5.730000e-67	267.0
159	TraesCS2B01G085200	chr7B	77.363	455	87	9	254	706	270536107	270536547	1.240000e-63	255.0
160	TraesCS2B01G085200	chr7B	77.143	455	88	8	254	706	270537729	270538169	5.770000e-62	250.0
161	TraesCS2B01G085200	chr7B	98.925	93	1	0	1	93	672480106	672480014	5.980000e-37	167.0
162	TraesCS2B01G085200	chr7B	98.913	92	0	1	1	92	23313131	23313221	7.730000e-36	163.0
163	TraesCS2B01G085200	chr7B	95.506	89	4	0	3216	3304	292839278	292839366	1.010000e-29	143.0
164	TraesCS2B01G085200	chr7B	93.846	65	4	0	1930	1994	176003394	176003458	2.210000e-16	99.0
165	TraesCS2B01G085200	chr7B	92.188	64	4	1	2178	2240	714425199	714425136	1.330000e-13	89.8
166	TraesCS2B01G085200	chr7B	92.105	38	3	0	2247	2284	159549677	159549714	5.000000e-03	54.7
167	TraesCS2B01G085200	chr7A	78.338	397	74	8	254	647	42915646	42915259	7.460000e-61	246.0
168	TraesCS2B01G085200	chr7A	79.381	291	46	13	7019	7301	700075686	700075970	9.860000e-45	193.0
169	TraesCS2B01G085200	chr7A	78.378	222	39	9	7099	7313	700074680	700074461	1.690000e-27	135.0
170	TraesCS2B01G085200	chr4A	100.000	91	0	0	1	91	628842298	628842388	1.660000e-37	169.0
171	TraesCS2B01G085200	chr4A	97.872	94	2	0	1	94	294060587	294060680	7.730000e-36	163.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G085200	chr2B	47532032	47541651	9619	False	8491.500000	11712	100.000000	1	9620	2	chr2B.!!$F4	9619
1	TraesCS2B01G085200	chr2B	47634989	47641880	6891	False	1392.142857	2717	92.437571	89	9620	7	chr2B.!!$F5	9531
2	TraesCS2B01G085200	chr2A	31829974	31834063	4089	False	1884.333333	3201	90.379333	3299	9620	3	chr2A.!!$F3	6321
3	TraesCS2B01G085200	chr2A	31818938	31824128	5190	False	631.200000	900	91.479400	887	3218	5	chr2A.!!$F2	2331
4	TraesCS2B01G085200	chr2A	552527917	552531751	3834	True	389.666667	625	91.086000	207	707	3	chr2A.!!$R2	500
5	TraesCS2B01G085200	chr2D	29523667	29531028	7361	False	995.500000	2800	88.765167	733	9620	6	chr2D.!!$F4	8887
6	TraesCS2B01G085200	chr4B	38582626	38584054	1428	True	1023.500000	1751	93.713500	4754	6332	2	chr4B.!!$R2	1578
7	TraesCS2B01G085200	chr4B	150743319	150744747	1428	False	1021.000000	1746	93.612500	4754	6332	2	chr4B.!!$F3	1578
8	TraesCS2B01G085200	chr1B	47909092	47910524	1432	True	725.333333	1748	95.604667	4754	6330	3	chr1B.!!$R6	1576
9	TraesCS2B01G085200	chr4D	216527127	216528030	903	True	1205.000000	1205	90.632000	5368	6283	1	chr4D.!!$R3	915
10	TraesCS2B01G085200	chr3A	559809486	559810414	928	False	669.000000	813	93.629500	5443	6341	2	chr3A.!!$F3	898
11	TraesCS2B01G085200	chr6D	264675045	264675568	523	False	763.000000	763	92.939000	5748	6271	1	chr6D.!!$F4	523
12	TraesCS2B01G085200	chr6D	393647353	393648368	1015	True	625.500000	763	90.719000	5368	6283	2	chr6D.!!$R2	915
13	TraesCS2B01G085200	chr5D	443809347	443809870	523	False	763.000000	763	92.939000	5748	6271	1	chr5D.!!$F1	523
14	TraesCS2B01G085200	chr5B	214018201	214018735	534	True	411.050000	760	95.617000	89	707	2	chr5B.!!$R4	618
15	TraesCS2B01G085200	chr5B	257333449	257334480	1031	False	346.666667	531	90.077000	2322	3196	3	chr5B.!!$F4	874
16	TraesCS2B01G085200	chr5B	257529537	257530564	1027	False	329.333333	525	88.627000	2322	3199	3	chr5B.!!$F5	877
17	TraesCS2B01G085200	chr3D	497711146	497712070	924	False	626.000000	758	91.052000	5368	6271	2	chr3D.!!$F3	903
18	TraesCS2B01G085200	chr6A	12074421	12075336	915	True	438.500000	553	84.439500	3706	4686	2	chr6A.!!$R1	980
19	TraesCS2B01G085200	chr6B	19236778	19237633	855	True	256.666667	366	83.487333	3706	4630	3	chr6B.!!$R1	924
20	TraesCS2B01G085200	chr7B	270536107	270538169	2062	False	252.500000	255	77.253000	254	706	2	chr7B.!!$F6	452

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
74	75	0.107410	TGTGCTTCACGTTTGACCCT	60.107	50.0	0.00	0.00	37.14	4.34	F
1184	4826	0.456221	GTCGAGATGACCCACGATGT	59.544	55.0	0.00	0.00	42.04	3.06	F
1947	6346	0.105607	GTACTCCCTCCCTCCGGAAT	60.106	60.0	5.23	0.00	37.86	3.01	F
3693	11235	0.322187	ACACCTCGTTTACCCATGGC	60.322	55.0	6.09	0.00	0.00	4.40	F
4974	12547	0.108945	GCAGCTTGCAAATGGAGTCC	60.109	55.0	0.73	0.73	44.26	3.85	F
5001	12574	0.097674	GCCGCAGCTTGTGAAGTATG	59.902	55.0	0.00	0.00	35.50	2.39	F
6817	15264	0.034616	GATGGGATCGAGGAAGCTGG	59.965	60.0	0.00	0.00	0.00	4.85	F
6861	15308	0.035439	CATACCGGTTTGGGCTGACT	60.035	55.0	15.04	0.00	44.64	3.41	F
6880	15327	0.105658	TTATGCCGAGGACTAGGGCT	60.106	55.0	13.09	4.28	46.97	5.19	F
6935	15382	0.310543	ACGCTAACAACGTACGACCA	59.689	50.0	24.41	1.03	43.02	4.02	F
8202	16653	0.250234	TGGAGATTGACCCAGAAGCG	59.750	55.0	0.00	0.00	0.00	4.68	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1940	6339	1.002201	TCCGCAACAAGTAATTCCGGA	59.998	47.619	0.00	0.00	40.62	5.14	R
2604	9576	0.178912	ACCCTTGTACTCCCTCCGTT	60.179	55.000	0.00	0.00	0.00	4.44	R
3850	11395	1.410083	GCAAATGGTGGGCTCCATCTA	60.410	52.381	13.21	0.00	46.14	1.98	R
4982	12555	0.097674	CATACTTCACAAGCTGCGGC	59.902	55.000	10.33	10.33	39.06	6.53	R
6798	15245	0.034616	CCAGCTTCCTCGATCCCATC	59.965	60.000	0.00	0.00	0.00	3.51	R
6842	15289	0.035439	AGTCAGCCCAAACCGGTATG	60.035	55.000	8.00	0.00	0.00	2.39	R
8102	16553	0.593128	GCATTTCAGTTGTGAGCGGT	59.407	50.000	0.00	0.00	32.98	5.68	R
8137	16588	2.428171	GCTTATGAAAATCAGCCCAGCA	59.572	45.455	0.00	0.00	0.00	4.41	R
8202	16653	4.023707	GGCATACTGTTAGCAATCCATGAC	60.024	45.833	0.00	0.00	0.00	3.06	R
8528	16979	4.578928	TGAATTCACCATCAGCATCATCAG	59.421	41.667	3.38	0.00	0.00	2.90	R
9225	17722	0.318120	CAAGCATCCAAAAACGCCCT	59.682	50.000	0.00	0.00	0.00	5.19	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
19	20	2.218953	TCGAACCGGCACTATTGATC	57.781	50.000	0.00	0.00	0.00	2.92
20	21	1.478916	TCGAACCGGCACTATTGATCA	59.521	47.619	0.00	0.00	0.00	2.92
21	22	1.593006	CGAACCGGCACTATTGATCAC	59.407	52.381	0.00	0.00	0.00	3.06
22	23	2.627945	GAACCGGCACTATTGATCACA	58.372	47.619	0.00	0.00	0.00	3.58
23	24	3.206150	GAACCGGCACTATTGATCACAT	58.794	45.455	0.00	0.00	0.00	3.21
24	25	3.281727	ACCGGCACTATTGATCACATT	57.718	42.857	0.00	0.00	0.00	2.71
25	26	4.415881	ACCGGCACTATTGATCACATTA	57.584	40.909	0.00	0.00	0.00	1.90
26	27	4.380531	ACCGGCACTATTGATCACATTAG	58.619	43.478	0.00	0.00	36.58	1.73
27	28	4.141711	ACCGGCACTATTGATCACATTAGT	60.142	41.667	0.00	0.53	41.10	2.24
31	32	5.334435	CACTATTGATCACATTAGTGCCG	57.666	43.478	19.08	4.84	45.30	5.69
32	33	4.212004	CACTATTGATCACATTAGTGCCGG	59.788	45.833	19.08	0.00	45.30	6.13
33	34	2.779755	TTGATCACATTAGTGCCGGT	57.220	45.000	1.90	0.00	45.49	5.28
34	35	2.779755	TGATCACATTAGTGCCGGTT	57.220	45.000	1.90	0.00	45.49	4.44
37	38	3.823873	TGATCACATTAGTGCCGGTTTTT	59.176	39.130	1.90	0.00	45.49	1.94
57	58	5.517322	TTTTTACAAACCGGCACTAATGT	57.483	34.783	0.00	0.11	0.00	2.71
58	59	4.491234	TTTACAAACCGGCACTAATGTG	57.509	40.909	0.00	0.00	46.37	3.21
70	71	4.466567	CACTAATGTGCTTCACGTTTGA	57.533	40.909	16.11	0.00	40.16	2.69
71	72	4.211389	CACTAATGTGCTTCACGTTTGAC	58.789	43.478	16.11	0.00	40.16	3.18
72	73	2.774439	AATGTGCTTCACGTTTGACC	57.226	45.000	0.00	0.00	40.16	4.02
73	74	0.951558	ATGTGCTTCACGTTTGACCC	59.048	50.000	0.00	0.00	37.14	4.46
74	75	0.107410	TGTGCTTCACGTTTGACCCT	60.107	50.000	0.00	0.00	37.14	4.34
76	77	1.404035	GTGCTTCACGTTTGACCCTTT	59.596	47.619	0.00	0.00	0.00	3.11
78	79	2.494073	TGCTTCACGTTTGACCCTTTTT	59.506	40.909	0.00	0.00	0.00	1.94
79	80	3.113322	GCTTCACGTTTGACCCTTTTTC	58.887	45.455	0.00	0.00	0.00	2.29
81	82	4.035909	GCTTCACGTTTGACCCTTTTTCTA	59.964	41.667	0.00	0.00	0.00	2.10
82	83	5.488645	TTCACGTTTGACCCTTTTTCTAC	57.511	39.130	0.00	0.00	0.00	2.59
83	84	4.773013	TCACGTTTGACCCTTTTTCTACT	58.227	39.130	0.00	0.00	0.00	2.57
85	86	5.987347	TCACGTTTGACCCTTTTTCTACTAG	59.013	40.000	0.00	0.00	0.00	2.57
86	87	5.756833	CACGTTTGACCCTTTTTCTACTAGT	59.243	40.000	0.00	0.00	0.00	2.57
87	88	5.756833	ACGTTTGACCCTTTTTCTACTAGTG	59.243	40.000	5.39	0.00	0.00	2.74
137	138	2.754648	AGGTACTGCCTCCGTTTCA	58.245	52.632	0.00	0.00	46.96	2.69
138	139	1.053424	AGGTACTGCCTCCGTTTCAA	58.947	50.000	0.00	0.00	46.96	2.69
139	140	1.418637	AGGTACTGCCTCCGTTTCAAA	59.581	47.619	0.00	0.00	46.96	2.69
141	142	2.817844	GGTACTGCCTCCGTTTCAAAAT	59.182	45.455	0.00	0.00	0.00	1.82
142	143	4.004982	GGTACTGCCTCCGTTTCAAAATA	58.995	43.478	0.00	0.00	0.00	1.40
143	144	4.094442	GGTACTGCCTCCGTTTCAAAATAG	59.906	45.833	0.00	0.00	0.00	1.73
145	146	4.589908	ACTGCCTCCGTTTCAAAATAGAT	58.410	39.130	0.00	0.00	0.00	1.98
147	148	4.584874	TGCCTCCGTTTCAAAATAGATGA	58.415	39.130	0.00	0.00	0.00	2.92
150	151	5.220681	GCCTCCGTTTCAAAATAGATGACTC	60.221	44.000	0.00	0.00	0.00	3.36
151	152	5.874810	CCTCCGTTTCAAAATAGATGACTCA	59.125	40.000	0.00	0.00	0.00	3.41
152	153	6.371548	CCTCCGTTTCAAAATAGATGACTCAA	59.628	38.462	0.00	0.00	0.00	3.02
153	154	7.066284	CCTCCGTTTCAAAATAGATGACTCAAT	59.934	37.037	0.00	0.00	0.00	2.57
154	155	8.335532	TCCGTTTCAAAATAGATGACTCAATT	57.664	30.769	0.00	0.00	0.00	2.32
155	156	8.792633	TCCGTTTCAAAATAGATGACTCAATTT	58.207	29.630	0.00	0.00	0.00	1.82
156	157	9.410556	CCGTTTCAAAATAGATGACTCAATTTT	57.589	29.630	0.00	0.00	33.07	1.82
194	195	9.778741	AGTACAAAGTTGAGTCATCTATTTTGA	57.221	29.630	15.99	3.46	38.91	2.69
197	198	9.736023	ACAAAGTTGAGTCATCTATTTTGAAAC	57.264	29.630	15.99	0.00	38.91	2.78
198	199	9.734620	CAAAGTTGAGTCATCTATTTTGAAACA	57.265	29.630	4.14	0.00	38.91	2.83
199	200	9.956720	AAAGTTGAGTCATCTATTTTGAAACAG	57.043	29.630	4.14	0.00	0.00	3.16
200	201	8.908786	AGTTGAGTCATCTATTTTGAAACAGA	57.091	30.769	1.70	0.00	0.00	3.41
201	202	9.342308	AGTTGAGTCATCTATTTTGAAACAGAA	57.658	29.630	1.70	0.00	0.00	3.02
202	203	9.950680	GTTGAGTCATCTATTTTGAAACAGAAA	57.049	29.630	0.00	0.00	0.00	2.52
204	205	9.559732	TGAGTCATCTATTTTGAAACAGAAAGA	57.440	29.630	0.00	0.00	0.00	2.52
710	4349	1.029681	CTCATGGTCGTATCACGGGA	58.970	55.000	0.00	0.00	42.81	5.14
763	4402	1.201722	CGTTCGACGTCCGTGTGAAA	61.202	55.000	10.58	0.00	36.74	2.69
801	4440	1.450669	GCGTAGAAAATGGGGCGGA	60.451	57.895	0.00	0.00	0.00	5.54
897	4536	0.597637	GTCATACACGGAGCGGATGG	60.598	60.000	0.00	0.00	0.00	3.51
1184	4826	0.456221	GTCGAGATGACCCACGATGT	59.544	55.000	0.00	0.00	42.04	3.06
1257	4899	1.993653	CACCATGGAGGCCTTCTCA	59.006	57.895	21.47	9.68	44.19	3.27
1455	5812	3.164268	TGGACCCAGATGACAATTTTGG	58.836	45.455	0.00	0.00	0.00	3.28
1465	5822	0.743688	ACAATTTTGGTCGTGCTGCA	59.256	45.000	0.00	0.00	0.00	4.41
1470	5827	0.602638	TTTGGTCGTGCTGCAGGTAG	60.603	55.000	20.27	5.28	0.00	3.18
1570	5934	4.980434	CCTTTCTGCTGTTTGATTTGACAG	59.020	41.667	0.00	0.00	44.67	3.51
1571	5935	5.450965	CCTTTCTGCTGTTTGATTTGACAGT	60.451	40.000	5.52	0.00	43.94	3.55
1612	5979	3.157087	TCTGCAAGGAATTTGTTCTCCC	58.843	45.455	0.00	0.00	39.08	4.30
1620	5987	5.458595	AGGAATTTGTTCTCCCTTTGAACT	58.541	37.500	7.89	0.00	42.86	3.01
1630	5997	7.228706	TGTTCTCCCTTTGAACTTCAGATTTAC	59.771	37.037	7.89	0.00	42.86	2.01
1631	5998	7.079451	TCTCCCTTTGAACTTCAGATTTACT	57.921	36.000	0.00	0.00	0.00	2.24
1632	5999	7.162082	TCTCCCTTTGAACTTCAGATTTACTC	58.838	38.462	0.00	0.00	0.00	2.59
1659	6026	0.603065	GTGCCTTTTGATGTGGACCC	59.397	55.000	0.00	0.00	0.00	4.46
1672	6039	3.420893	TGTGGACCCTTGCTTTATCAAG	58.579	45.455	0.00	0.00	42.23	3.02
1712	6080	9.092876	ACGCAAATGAACTTTTCTAAAATTTCA	57.907	25.926	17.73	17.73	45.36	2.69
1781	6149	6.806739	GTGTTGGTTAGGTTAAGATCAAATGC	59.193	38.462	0.00	0.00	0.00	3.56
1929	6328	9.503369	AAAATGGTACTCCCTCTATAAACTAGT	57.497	33.333	0.00	0.00	0.00	2.57
1931	6330	9.585369	AATGGTACTCCCTCTATAAACTAGTAC	57.415	37.037	0.00	0.00	37.93	2.73
1932	6331	8.342327	TGGTACTCCCTCTATAAACTAGTACT	57.658	38.462	0.00	0.00	38.44	2.73
1933	6332	8.435982	TGGTACTCCCTCTATAAACTAGTACTC	58.564	40.741	0.00	0.00	38.44	2.59
1934	6333	7.882791	GGTACTCCCTCTATAAACTAGTACTCC	59.117	44.444	0.00	0.00	38.44	3.85
1935	6334	6.851318	ACTCCCTCTATAAACTAGTACTCCC	58.149	44.000	0.00	0.00	0.00	4.30
1936	6335	6.624860	ACTCCCTCTATAAACTAGTACTCCCT	59.375	42.308	0.00	0.00	0.00	4.20
1937	6336	7.089106	TCCCTCTATAAACTAGTACTCCCTC	57.911	44.000	0.00	0.00	0.00	4.30
1938	6337	6.045341	TCCCTCTATAAACTAGTACTCCCTCC	59.955	46.154	0.00	0.00	0.00	4.30
1939	6338	6.247676	CCTCTATAAACTAGTACTCCCTCCC	58.752	48.000	0.00	0.00	0.00	4.30
1940	6339	6.045813	CCTCTATAAACTAGTACTCCCTCCCT	59.954	46.154	0.00	0.00	0.00	4.20
1941	6340	7.089106	TCTATAAACTAGTACTCCCTCCCTC	57.911	44.000	0.00	0.00	0.00	4.30
1942	6341	3.401589	AAACTAGTACTCCCTCCCTCC	57.598	52.381	0.00	0.00	0.00	4.30
1943	6342	0.845337	ACTAGTACTCCCTCCCTCCG	59.155	60.000	0.00	0.00	0.00	4.63
1944	6343	0.110869	CTAGTACTCCCTCCCTCCGG	59.889	65.000	0.00	0.00	0.00	5.14
1945	6344	0.327867	TAGTACTCCCTCCCTCCGGA	60.328	60.000	2.93	2.93	36.45	5.14
1946	6345	1.219824	AGTACTCCCTCCCTCCGGAA	61.220	60.000	5.23	0.00	37.86	4.30
1947	6346	0.105607	GTACTCCCTCCCTCCGGAAT	60.106	60.000	5.23	0.00	37.86	3.01
1948	6347	0.640495	TACTCCCTCCCTCCGGAATT	59.360	55.000	5.23	0.00	37.86	2.17
1949	6348	0.640495	ACTCCCTCCCTCCGGAATTA	59.360	55.000	5.23	0.00	37.86	1.40
1950	6349	1.049402	CTCCCTCCCTCCGGAATTAC	58.951	60.000	5.23	0.00	37.86	1.89
1951	6350	0.640495	TCCCTCCCTCCGGAATTACT	59.360	55.000	5.23	0.00	37.86	2.24
1952	6351	1.009183	TCCCTCCCTCCGGAATTACTT	59.991	52.381	5.23	0.00	37.86	2.24
1953	6352	1.141053	CCCTCCCTCCGGAATTACTTG	59.859	57.143	5.23	0.00	37.86	3.16
1954	6353	1.838077	CCTCCCTCCGGAATTACTTGT	59.162	52.381	5.23	0.00	37.86	3.16
1955	6354	2.238898	CCTCCCTCCGGAATTACTTGTT	59.761	50.000	5.23	0.00	37.86	2.83
1956	6355	3.270877	CTCCCTCCGGAATTACTTGTTG	58.729	50.000	5.23	0.00	37.86	3.33
1957	6356	1.743394	CCCTCCGGAATTACTTGTTGC	59.257	52.381	5.23	0.00	0.00	4.17
1958	6357	1.396996	CCTCCGGAATTACTTGTTGCG	59.603	52.381	5.23	0.00	39.63	4.85
1962	6361	3.757745	CGGAATTACTTGTTGCGGAAT	57.242	42.857	0.00	0.00	36.87	3.01
1963	6362	4.091453	CGGAATTACTTGTTGCGGAATT	57.909	40.909	0.00	0.00	36.87	2.17
1964	6363	3.851403	CGGAATTACTTGTTGCGGAATTG	59.149	43.478	0.00	0.00	36.87	2.32
1965	6364	4.173256	GGAATTACTTGTTGCGGAATTGG	58.827	43.478	0.00	0.00	0.00	3.16
1966	6365	4.082463	GGAATTACTTGTTGCGGAATTGGA	60.082	41.667	0.00	0.00	0.00	3.53
1967	6366	5.394115	GGAATTACTTGTTGCGGAATTGGAT	60.394	40.000	0.00	0.00	0.00	3.41
1968	6367	6.183360	GGAATTACTTGTTGCGGAATTGGATA	60.183	38.462	0.00	0.00	0.00	2.59
1969	6368	6.767524	ATTACTTGTTGCGGAATTGGATAA	57.232	33.333	0.00	0.00	0.00	1.75
1970	6369	6.576662	TTACTTGTTGCGGAATTGGATAAA	57.423	33.333	0.00	0.00	0.00	1.40
1971	6370	5.461032	ACTTGTTGCGGAATTGGATAAAA	57.539	34.783	0.00	0.00	0.00	1.52
1972	6371	5.848406	ACTTGTTGCGGAATTGGATAAAAA	58.152	33.333	0.00	0.00	0.00	1.94
1973	6372	6.463360	ACTTGTTGCGGAATTGGATAAAAAT	58.537	32.000	0.00	0.00	0.00	1.82
1974	6373	6.368516	ACTTGTTGCGGAATTGGATAAAAATG	59.631	34.615	0.00	0.00	0.00	2.32
1975	6374	5.174395	TGTTGCGGAATTGGATAAAAATGG	58.826	37.500	0.00	0.00	0.00	3.16
1976	6375	5.047021	TGTTGCGGAATTGGATAAAAATGGA	60.047	36.000	0.00	0.00	0.00	3.41
1977	6376	5.867903	TGCGGAATTGGATAAAAATGGAT	57.132	34.783	0.00	0.00	0.00	3.41
1978	6377	5.599732	TGCGGAATTGGATAAAAATGGATG	58.400	37.500	0.00	0.00	0.00	3.51
1979	6378	5.128499	TGCGGAATTGGATAAAAATGGATGT	59.872	36.000	0.00	0.00	0.00	3.06
1980	6379	6.322456	TGCGGAATTGGATAAAAATGGATGTA	59.678	34.615	0.00	0.00	0.00	2.29
1981	6380	7.015098	TGCGGAATTGGATAAAAATGGATGTAT	59.985	33.333	0.00	0.00	0.00	2.29
1982	6381	7.542130	GCGGAATTGGATAAAAATGGATGTATC	59.458	37.037	0.00	0.00	0.00	2.24
1983	6382	8.796475	CGGAATTGGATAAAAATGGATGTATCT	58.204	33.333	0.00	0.00	0.00	1.98
2009	6408	6.742559	AACTAAAAGGTTCTGTCTAGGACA	57.257	37.500	0.43	0.43	40.50	4.02
2010	6409	6.099159	ACTAAAAGGTTCTGTCTAGGACAC	57.901	41.667	0.00	0.00	37.67	3.67
2011	6410	5.601313	ACTAAAAGGTTCTGTCTAGGACACA	59.399	40.000	0.00	0.00	37.67	3.72
2012	6411	5.568620	AAAAGGTTCTGTCTAGGACACAT	57.431	39.130	0.00	0.00	37.67	3.21
2013	6412	4.810191	AAGGTTCTGTCTAGGACACATC	57.190	45.455	0.00	0.00	37.67	3.06
2014	6413	4.054359	AGGTTCTGTCTAGGACACATCT	57.946	45.455	0.00	0.00	37.67	2.90
2015	6414	5.194473	AGGTTCTGTCTAGGACACATCTA	57.806	43.478	0.00	0.00	37.67	1.98
2016	6415	5.197451	AGGTTCTGTCTAGGACACATCTAG	58.803	45.833	0.00	0.00	37.67	2.43
2017	6416	5.044772	AGGTTCTGTCTAGGACACATCTAGA	60.045	44.000	0.00	0.00	37.67	2.43
2018	6417	5.830991	GGTTCTGTCTAGGACACATCTAGAT	59.169	44.000	0.00	0.00	43.25	1.98
2019	6418	6.238897	GGTTCTGTCTAGGACACATCTAGATG	60.239	46.154	27.63	27.63	43.25	2.90
2059	6458	5.728471	CATCTAAACTGATGTCCACTCTGT	58.272	41.667	0.00	0.00	39.05	3.41
2060	6459	5.808366	TCTAAACTGATGTCCACTCTGTT	57.192	39.130	0.00	0.00	36.66	3.16
2061	6460	6.174720	TCTAAACTGATGTCCACTCTGTTT	57.825	37.500	11.33	11.33	43.11	2.83
2062	6461	5.991606	TCTAAACTGATGTCCACTCTGTTTG	59.008	40.000	14.59	7.92	41.71	2.93
2063	6462	3.845781	ACTGATGTCCACTCTGTTTGT	57.154	42.857	0.00	0.00	0.00	2.83
2064	6463	3.470709	ACTGATGTCCACTCTGTTTGTG	58.529	45.455	0.00	0.00	35.39	3.33
2075	6474	6.867662	CACTCTGTTTGTGGTCTAATTTCT	57.132	37.500	0.00	0.00	0.00	2.52
2076	6475	7.264373	CACTCTGTTTGTGGTCTAATTTCTT	57.736	36.000	0.00	0.00	0.00	2.52
2077	6476	7.707104	CACTCTGTTTGTGGTCTAATTTCTTT	58.293	34.615	0.00	0.00	0.00	2.52
2078	6477	8.190784	CACTCTGTTTGTGGTCTAATTTCTTTT	58.809	33.333	0.00	0.00	0.00	2.27
2079	6478	8.190784	ACTCTGTTTGTGGTCTAATTTCTTTTG	58.809	33.333	0.00	0.00	0.00	2.44
2080	6479	8.062065	TCTGTTTGTGGTCTAATTTCTTTTGT	57.938	30.769	0.00	0.00	0.00	2.83
2081	6480	8.188139	TCTGTTTGTGGTCTAATTTCTTTTGTC	58.812	33.333	0.00	0.00	0.00	3.18
2082	6481	7.262048	TGTTTGTGGTCTAATTTCTTTTGTCC	58.738	34.615	0.00	0.00	0.00	4.02
2083	6482	7.123547	TGTTTGTGGTCTAATTTCTTTTGTCCT	59.876	33.333	0.00	0.00	0.00	3.85
2084	6483	8.626526	GTTTGTGGTCTAATTTCTTTTGTCCTA	58.373	33.333	0.00	0.00	0.00	2.94
2085	6484	8.934023	TTGTGGTCTAATTTCTTTTGTCCTAT	57.066	30.769	0.00	0.00	0.00	2.57
2086	6485	8.934023	TGTGGTCTAATTTCTTTTGTCCTATT	57.066	30.769	0.00	0.00	0.00	1.73
2087	6486	9.362151	TGTGGTCTAATTTCTTTTGTCCTATTT	57.638	29.630	0.00	0.00	0.00	1.40
2136	6535	6.737720	ATATTGGTGAGAGCTTAGATGTGA	57.262	37.500	0.00	0.00	0.00	3.58
2137	6536	3.876274	TGGTGAGAGCTTAGATGTGAC	57.124	47.619	0.00	0.00	0.00	3.67
2138	6537	3.165071	TGGTGAGAGCTTAGATGTGACA	58.835	45.455	0.00	0.00	0.00	3.58
2139	6538	3.771479	TGGTGAGAGCTTAGATGTGACAT	59.229	43.478	0.00	0.00	0.00	3.06
2140	6539	4.142071	TGGTGAGAGCTTAGATGTGACATC	60.142	45.833	17.46	17.46	0.00	3.06
2141	6540	4.367450	GTGAGAGCTTAGATGTGACATCC	58.633	47.826	21.05	6.69	0.00	3.51
2142	6541	4.099266	GTGAGAGCTTAGATGTGACATCCT	59.901	45.833	21.05	11.37	0.00	3.24
2143	6542	4.713814	TGAGAGCTTAGATGTGACATCCTT	59.286	41.667	21.05	7.22	0.00	3.36
2144	6543	5.893824	TGAGAGCTTAGATGTGACATCCTTA	59.106	40.000	21.05	6.22	0.00	2.69
2145	6544	6.381133	TGAGAGCTTAGATGTGACATCCTTAA	59.619	38.462	21.05	13.11	0.00	1.85
2146	6545	7.093333	TGAGAGCTTAGATGTGACATCCTTAAA	60.093	37.037	21.05	10.18	0.00	1.52
2147	6546	7.624549	AGAGCTTAGATGTGACATCCTTAAAA	58.375	34.615	21.05	8.00	0.00	1.52
2148	6547	8.103305	AGAGCTTAGATGTGACATCCTTAAAAA	58.897	33.333	21.05	6.46	0.00	1.94
2192	6591	9.840427	AGACAAAATGAAATTAAATACGTCCAG	57.160	29.630	0.00	0.00	33.67	3.86
2193	6592	9.834628	GACAAAATGAAATTAAATACGTCCAGA	57.165	29.630	0.00	0.00	33.67	3.86
2200	6599	9.268268	TGAAATTAAATACGTCCAGATACATCC	57.732	33.333	0.00	0.00	0.00	3.51
2201	6600	9.268268	GAAATTAAATACGTCCAGATACATCCA	57.732	33.333	0.00	0.00	0.00	3.41
2202	6601	9.793259	AAATTAAATACGTCCAGATACATCCAT	57.207	29.630	0.00	0.00	0.00	3.41
2203	6602	9.793259	AATTAAATACGTCCAGATACATCCATT	57.207	29.630	0.00	0.00	0.00	3.16
2204	6603	9.793259	ATTAAATACGTCCAGATACATCCATTT	57.207	29.630	0.00	0.00	0.00	2.32
2205	6604	7.730364	AAATACGTCCAGATACATCCATTTC	57.270	36.000	0.00	0.00	0.00	2.17
2206	6605	4.073293	ACGTCCAGATACATCCATTTCC	57.927	45.455	0.00	0.00	0.00	3.13
2207	6606	3.059884	CGTCCAGATACATCCATTTCCG	58.940	50.000	0.00	0.00	0.00	4.30
2208	6607	2.808543	GTCCAGATACATCCATTTCCGC	59.191	50.000	0.00	0.00	0.00	5.54
2209	6608	1.800586	CCAGATACATCCATTTCCGCG	59.199	52.381	0.00	0.00	0.00	6.46
2210	6609	2.547855	CCAGATACATCCATTTCCGCGA	60.548	50.000	8.23	0.00	0.00	5.87
2211	6610	2.476619	CAGATACATCCATTTCCGCGAC	59.523	50.000	8.23	0.00	0.00	5.19
2212	6611	2.102420	AGATACATCCATTTCCGCGACA	59.898	45.455	8.23	0.00	0.00	4.35
2213	6612	2.388310	TACATCCATTTCCGCGACAA	57.612	45.000	8.23	0.00	0.00	3.18
2214	6613	1.086696	ACATCCATTTCCGCGACAAG	58.913	50.000	8.23	0.00	0.00	3.16
2215	6614	1.086696	CATCCATTTCCGCGACAAGT	58.913	50.000	8.23	0.00	0.00	3.16
2216	6615	2.276201	CATCCATTTCCGCGACAAGTA	58.724	47.619	8.23	0.00	0.00	2.24
2217	6616	2.459060	TCCATTTCCGCGACAAGTAA	57.541	45.000	8.23	0.00	0.00	2.24
2218	6617	2.980568	TCCATTTCCGCGACAAGTAAT	58.019	42.857	8.23	0.00	0.00	1.89
2219	6618	3.340034	TCCATTTCCGCGACAAGTAATT	58.660	40.909	8.23	0.00	0.00	1.40
2220	6619	3.754323	TCCATTTCCGCGACAAGTAATTT	59.246	39.130	8.23	0.00	0.00	1.82
2221	6620	4.095610	CCATTTCCGCGACAAGTAATTTC	58.904	43.478	8.23	0.00	0.00	2.17
2222	6621	4.378978	CCATTTCCGCGACAAGTAATTTCA	60.379	41.667	8.23	0.00	0.00	2.69
2223	6622	4.398549	TTTCCGCGACAAGTAATTTCAG	57.601	40.909	8.23	0.00	0.00	3.02
2224	6623	3.306917	TCCGCGACAAGTAATTTCAGA	57.693	42.857	8.23	0.00	0.00	3.27
2225	6624	3.857052	TCCGCGACAAGTAATTTCAGAT	58.143	40.909	8.23	0.00	0.00	2.90
2226	6625	5.001237	TCCGCGACAAGTAATTTCAGATA	57.999	39.130	8.23	0.00	0.00	1.98
2227	6626	5.041287	TCCGCGACAAGTAATTTCAGATAG	58.959	41.667	8.23	0.00	0.00	2.08
2228	6627	5.041287	CCGCGACAAGTAATTTCAGATAGA	58.959	41.667	8.23	0.00	0.00	1.98
2229	6628	5.174035	CCGCGACAAGTAATTTCAGATAGAG	59.826	44.000	8.23	0.00	0.00	2.43
2230	6629	5.174035	CGCGACAAGTAATTTCAGATAGAGG	59.826	44.000	0.00	0.00	0.00	3.69
2231	6630	5.463724	GCGACAAGTAATTTCAGATAGAGGG	59.536	44.000	0.00	0.00	0.00	4.30
2232	6631	6.683110	GCGACAAGTAATTTCAGATAGAGGGA	60.683	42.308	0.00	0.00	0.00	4.20
2233	6632	6.920758	CGACAAGTAATTTCAGATAGAGGGAG	59.079	42.308	0.00	0.00	0.00	4.30
2411	9363	3.806949	AGTGGAGCAACCCAGAAAATA	57.193	42.857	0.00	0.00	36.78	1.40
2474	9426	1.254026	TGTCCTGTTCCCACTACTCG	58.746	55.000	0.00	0.00	0.00	4.18
2523	9483	3.412386	GTGTCTTGTGCTCTTTGGGTAT	58.588	45.455	0.00	0.00	0.00	2.73
2528	9488	6.374333	TGTCTTGTGCTCTTTGGGTATAAATC	59.626	38.462	0.00	0.00	0.00	2.17
2537	9509	7.560262	GCTCTTTGGGTATAAATCCCTAAAACT	59.440	37.037	2.65	0.00	44.84	2.66
2538	9510	9.475620	CTCTTTGGGTATAAATCCCTAAAACTT	57.524	33.333	2.65	0.00	44.84	2.66
2542	9514	9.910267	TTGGGTATAAATCCCTAAAACTTACTC	57.090	33.333	2.65	0.00	44.84	2.59
2543	9515	8.496916	TGGGTATAAATCCCTAAAACTTACTCC	58.503	37.037	2.65	0.00	44.84	3.85
2544	9516	7.941238	GGGTATAAATCCCTAAAACTTACTCCC	59.059	40.741	0.00	0.00	41.58	4.30
2545	9517	8.721479	GGTATAAATCCCTAAAACTTACTCCCT	58.279	37.037	0.00	0.00	0.00	4.20
2546	9518	9.775854	GTATAAATCCCTAAAACTTACTCCCTC	57.224	37.037	0.00	0.00	0.00	4.30
2547	9519	5.712084	AATCCCTAAAACTTACTCCCTCC	57.288	43.478	0.00	0.00	0.00	4.30
2548	9520	3.102204	TCCCTAAAACTTACTCCCTCCG	58.898	50.000	0.00	0.00	0.00	4.63
2549	9521	2.836372	CCCTAAAACTTACTCCCTCCGT	59.164	50.000	0.00	0.00	0.00	4.69
2550	9522	3.262660	CCCTAAAACTTACTCCCTCCGTT	59.737	47.826	0.00	0.00	0.00	4.44
2551	9523	4.502016	CCTAAAACTTACTCCCTCCGTTC	58.498	47.826	0.00	0.00	0.00	3.95
2552	9524	3.413846	AAAACTTACTCCCTCCGTTCC	57.586	47.619	0.00	0.00	0.00	3.62
2553	9525	2.019807	AACTTACTCCCTCCGTTCCA	57.980	50.000	0.00	0.00	0.00	3.53
2554	9526	1.558233	ACTTACTCCCTCCGTTCCAG	58.442	55.000	0.00	0.00	0.00	3.86
2555	9527	1.076677	ACTTACTCCCTCCGTTCCAGA	59.923	52.381	0.00	0.00	0.00	3.86
2556	9528	2.176889	CTTACTCCCTCCGTTCCAGAA	58.823	52.381	0.00	0.00	0.00	3.02
2557	9529	2.544844	TACTCCCTCCGTTCCAGAAT	57.455	50.000	0.00	0.00	0.00	2.40
2558	9530	2.544844	ACTCCCTCCGTTCCAGAATA	57.455	50.000	0.00	0.00	0.00	1.75
2559	9531	2.108970	ACTCCCTCCGTTCCAGAATAC	58.891	52.381	0.00	0.00	0.00	1.89
2560	9532	2.292323	ACTCCCTCCGTTCCAGAATACT	60.292	50.000	0.00	0.00	0.00	2.12
2561	9533	3.053095	ACTCCCTCCGTTCCAGAATACTA	60.053	47.826	0.00	0.00	0.00	1.82
2562	9534	3.563223	TCCCTCCGTTCCAGAATACTAG	58.437	50.000	0.00	0.00	0.00	2.57
2563	9535	3.203710	TCCCTCCGTTCCAGAATACTAGA	59.796	47.826	0.00	0.00	0.00	2.43
2564	9536	4.140994	TCCCTCCGTTCCAGAATACTAGAT	60.141	45.833	0.00	0.00	0.00	1.98
2565	9537	4.021894	CCCTCCGTTCCAGAATACTAGATG	60.022	50.000	0.00	0.00	0.00	2.90
2566	9538	4.827835	CCTCCGTTCCAGAATACTAGATGA	59.172	45.833	0.00	0.00	0.00	2.92
2567	9539	5.478679	CCTCCGTTCCAGAATACTAGATGAT	59.521	44.000	0.00	0.00	0.00	2.45
2568	9540	6.349777	CCTCCGTTCCAGAATACTAGATGATC	60.350	46.154	0.00	0.00	0.00	2.92
2569	9541	5.477291	TCCGTTCCAGAATACTAGATGATCC	59.523	44.000	0.00	0.00	0.00	3.36
2570	9542	5.243954	CCGTTCCAGAATACTAGATGATCCA	59.756	44.000	0.00	0.00	0.00	3.41
2571	9543	6.239317	CCGTTCCAGAATACTAGATGATCCAA	60.239	42.308	0.00	0.00	0.00	3.53
2572	9544	7.382110	CGTTCCAGAATACTAGATGATCCAAT	58.618	38.462	0.00	0.00	0.00	3.16
2573	9545	7.875041	CGTTCCAGAATACTAGATGATCCAATT	59.125	37.037	0.00	0.00	0.00	2.32
2574	9546	9.566432	GTTCCAGAATACTAGATGATCCAATTT	57.434	33.333	0.00	0.00	0.00	1.82
2576	9548	9.565090	TCCAGAATACTAGATGATCCAATTTTG	57.435	33.333	0.00	0.00	0.00	2.44
2577	9549	9.347240	CCAGAATACTAGATGATCCAATTTTGT	57.653	33.333	0.00	0.00	0.00	2.83
2611	9583	7.786178	TGTATCATCTATTTTGAAACGGAGG	57.214	36.000	0.00	0.00	0.00	4.30
2612	9584	6.765989	TGTATCATCTATTTTGAAACGGAGGG	59.234	38.462	0.00	0.00	0.00	4.30
2613	9585	5.429681	TCATCTATTTTGAAACGGAGGGA	57.570	39.130	0.00	0.00	0.00	4.20
2614	9586	5.428253	TCATCTATTTTGAAACGGAGGGAG	58.572	41.667	0.00	0.00	0.00	4.30
2629	9726	1.201424	GGGAGTACAAGGGTAGGTGG	58.799	60.000	0.00	0.00	0.00	4.61
2763	10157	6.603237	TGATCTATAAACCACAAATGCTCG	57.397	37.500	0.00	0.00	0.00	5.03
2799	10193	4.989279	CCTGCATGGTTAACTAGCATTT	57.011	40.909	16.36	0.00	42.12	2.32
2852	10247	3.369175	AGAGTCATACAGCTGACATGGA	58.631	45.455	23.35	7.44	46.45	3.41
2853	10248	3.131933	AGAGTCATACAGCTGACATGGAC	59.868	47.826	23.35	18.30	46.45	4.02
2854	10249	2.833943	AGTCATACAGCTGACATGGACA	59.166	45.455	23.35	4.95	46.45	4.02
2855	10250	2.932614	GTCATACAGCTGACATGGACAC	59.067	50.000	23.35	12.78	44.03	3.67
2856	10251	2.566724	TCATACAGCTGACATGGACACA	59.433	45.455	23.35	4.25	0.00	3.72
2857	10252	3.198417	TCATACAGCTGACATGGACACAT	59.802	43.478	23.35	0.00	37.99	3.21
2900	10298	7.339721	TCTGTATTAACTGGAGTGTAGAAGGAG	59.660	40.741	0.00	0.00	0.00	3.69
2956	10354	4.836825	CTGATTGGGTGACTTCTATGTGT	58.163	43.478	0.00	0.00	0.00	3.72
2963	10361	6.170506	TGGGTGACTTCTATGTGTGAAATAC	58.829	40.000	0.00	0.00	0.00	1.89
2964	10362	5.291128	GGGTGACTTCTATGTGTGAAATACG	59.709	44.000	0.00	0.00	0.00	3.06
2998	10397	2.143925	GGCTGAACGTTTTAGTGAGCT	58.856	47.619	0.46	0.00	33.41	4.09
3020	10520	5.572896	GCTTGCACATTTCATGTAGTTAACC	59.427	40.000	0.88	0.00	42.70	2.85
3028	10528	6.612247	TTTCATGTAGTTAACCACACACTG	57.388	37.500	9.09	4.69	0.00	3.66
3291	10798	6.557291	AAAACGTTTTACATTATGGGACGA	57.443	33.333	24.13	0.00	33.67	4.20
3382	10894	7.397892	TTTTTGAAATATTCCTGCGACCATA	57.602	32.000	0.00	0.00	0.00	2.74
3504	11020	5.452078	AGTGCTAGTCAGAGCTCATATTC	57.548	43.478	17.77	1.53	43.27	1.75
3693	11235	0.322187	ACACCTCGTTTACCCATGGC	60.322	55.000	6.09	0.00	0.00	4.40
3704	11246	0.539438	ACCCATGGCTTTTGAGCGAA	60.539	50.000	6.09	0.00	35.24	4.70
3800	11343	7.170393	ACCACTAATTTTTGGCCTAATCTTC	57.830	36.000	3.32	0.00	36.20	2.87
3801	11344	6.154534	ACCACTAATTTTTGGCCTAATCTTCC	59.845	38.462	3.32	0.00	36.20	3.46
3850	11395	4.511527	GCCCATCTGATGACGATTATGAT	58.488	43.478	18.92	0.00	0.00	2.45
3953	11500	1.007963	TCCCTGAAACTACCCCGATCT	59.992	52.381	0.00	0.00	0.00	2.75
3958	11505	4.589374	CCTGAAACTACCCCGATCTAGATT	59.411	45.833	6.70	0.00	0.00	2.40
3978	11525	2.367202	GGATCGAGCAACCCCCTCA	61.367	63.158	1.84	0.00	0.00	3.86
4269	11819	0.671781	GTTCCAGAGCGCATCACTGT	60.672	55.000	11.47	0.00	32.40	3.55
4582	12155	3.650950	ATGTGCCCGTGCCCTCTT	61.651	61.111	0.00	0.00	36.33	2.85
4869	12442	6.763610	TGTTGCACGTACCATATCATTGAATA	59.236	34.615	0.00	0.00	0.00	1.75
4874	12447	9.151471	GCACGTACCATATCATTGAATAAGTAT	57.849	33.333	0.00	0.00	0.00	2.12
4940	12513	7.713073	TGTGTCCATTTACATTCGATAAGCATA	59.287	33.333	0.00	0.00	0.00	3.14
4941	12514	8.556194	GTGTCCATTTACATTCGATAAGCATAA	58.444	33.333	0.00	0.00	0.00	1.90
4942	12515	9.283768	TGTCCATTTACATTCGATAAGCATAAT	57.716	29.630	0.00	0.00	0.00	1.28
4943	12516	9.546909	GTCCATTTACATTCGATAAGCATAATG	57.453	33.333	0.00	0.00	35.83	1.90
4944	12517	9.500785	TCCATTTACATTCGATAAGCATAATGA	57.499	29.630	0.00	0.00	34.26	2.57
4954	12527	8.996024	TCGATAAGCATAATGAAATTATCCGA	57.004	30.769	0.00	0.00	46.08	4.55
4955	12528	9.087424	TCGATAAGCATAATGAAATTATCCGAG	57.913	33.333	0.00	0.00	46.08	4.63
4956	12529	7.848051	CGATAAGCATAATGAAATTATCCGAGC	59.152	37.037	0.00	0.00	46.08	5.03
4957	12530	6.882610	AAGCATAATGAAATTATCCGAGCA	57.117	33.333	0.00	0.00	46.08	4.26
4958	12531	6.492007	AGCATAATGAAATTATCCGAGCAG	57.508	37.500	0.00	0.00	46.08	4.24
4959	12532	5.091431	GCATAATGAAATTATCCGAGCAGC	58.909	41.667	0.00	0.00	46.08	5.25
4960	12533	5.106396	GCATAATGAAATTATCCGAGCAGCT	60.106	40.000	0.00	0.00	46.08	4.24
4961	12534	6.569226	GCATAATGAAATTATCCGAGCAGCTT	60.569	38.462	0.00	0.00	46.08	3.74
4962	12535	4.825546	ATGAAATTATCCGAGCAGCTTG	57.174	40.909	2.08	2.08	0.00	4.01
4963	12536	2.355756	TGAAATTATCCGAGCAGCTTGC	59.644	45.455	3.76	0.47	45.46	4.01
4964	12537	6.893262	AATGAAATTATCCGAGCAGCTTGCA	61.893	40.000	3.76	0.00	39.85	4.08
4965	12538	8.290959	AATGAAATTATCCGAGCAGCTTGCAA	62.291	38.462	3.76	0.00	39.85	4.08
4966	12539	9.659503	AATGAAATTATCCGAGCAGCTTGCAAA	62.660	37.037	3.76	0.00	39.85	3.68
4973	12546	3.413522	GCAGCTTGCAAATGGAGTC	57.586	52.632	11.99	0.00	44.26	3.36
4974	12547	0.108945	GCAGCTTGCAAATGGAGTCC	60.109	55.000	0.73	0.73	44.26	3.85
4975	12548	1.542492	CAGCTTGCAAATGGAGTCCT	58.458	50.000	11.33	0.00	0.00	3.85
4976	12549	1.201647	CAGCTTGCAAATGGAGTCCTG	59.798	52.381	11.33	1.23	0.00	3.86
4977	12550	1.074405	AGCTTGCAAATGGAGTCCTGA	59.926	47.619	11.33	0.00	0.00	3.86
4978	12551	1.888512	GCTTGCAAATGGAGTCCTGAA	59.111	47.619	11.33	0.00	0.00	3.02
4979	12552	2.352127	GCTTGCAAATGGAGTCCTGAAC	60.352	50.000	11.33	0.00	0.00	3.18
4980	12553	2.957402	TGCAAATGGAGTCCTGAACT	57.043	45.000	11.33	0.00	42.42	3.01
4981	12554	4.326826	CTTGCAAATGGAGTCCTGAACTA	58.673	43.478	11.33	0.00	38.74	2.24
4982	12555	3.942829	TGCAAATGGAGTCCTGAACTAG	58.057	45.455	11.33	0.00	38.74	2.57
4983	12556	2.680339	GCAAATGGAGTCCTGAACTAGC	59.320	50.000	11.33	2.00	38.74	3.42
4984	12557	3.274288	CAAATGGAGTCCTGAACTAGCC	58.726	50.000	11.33	0.00	38.74	3.93
4985	12558	1.115467	ATGGAGTCCTGAACTAGCCG	58.885	55.000	11.33	0.00	38.74	5.52
4986	12559	1.142097	GGAGTCCTGAACTAGCCGC	59.858	63.158	0.41	0.00	38.74	6.53
4987	12560	1.605058	GGAGTCCTGAACTAGCCGCA	61.605	60.000	0.41	0.00	38.74	5.69
4988	12561	0.179124	GAGTCCTGAACTAGCCGCAG	60.179	60.000	0.00	0.00	38.74	5.18
4989	12562	1.811679	GTCCTGAACTAGCCGCAGC	60.812	63.158	0.00	0.00	40.32	5.25
4999	12572	3.966215	GCCGCAGCTTGTGAAGTA	58.034	55.556	0.00	0.00	35.50	2.24
5000	12573	2.471255	GCCGCAGCTTGTGAAGTAT	58.529	52.632	0.00	0.00	35.50	2.12
5001	12574	0.097674	GCCGCAGCTTGTGAAGTATG	59.902	55.000	0.00	0.00	35.50	2.39
5002	12575	0.729116	CCGCAGCTTGTGAAGTATGG	59.271	55.000	0.00	0.00	0.00	2.74
5003	12576	1.675714	CCGCAGCTTGTGAAGTATGGA	60.676	52.381	0.00	0.00	0.00	3.41
5004	12577	2.076100	CGCAGCTTGTGAAGTATGGAA	58.924	47.619	0.00	0.00	0.00	3.53
5005	12578	2.094894	CGCAGCTTGTGAAGTATGGAAG	59.905	50.000	0.00	0.00	0.00	3.46
5006	12579	2.421424	GCAGCTTGTGAAGTATGGAAGG	59.579	50.000	0.00	0.00	0.00	3.46
5007	12580	2.421424	CAGCTTGTGAAGTATGGAAGGC	59.579	50.000	0.00	0.00	0.00	4.35
5008	12581	1.398390	GCTTGTGAAGTATGGAAGGCG	59.602	52.381	0.00	0.00	0.00	5.52
5009	12582	2.935238	GCTTGTGAAGTATGGAAGGCGA	60.935	50.000	0.00	0.00	0.00	5.54
5010	12583	3.535561	CTTGTGAAGTATGGAAGGCGAT	58.464	45.455	0.00	0.00	0.00	4.58
5011	12584	3.179443	TGTGAAGTATGGAAGGCGATC	57.821	47.619	0.00	0.00	0.00	3.69
5012	12585	2.499693	TGTGAAGTATGGAAGGCGATCA	59.500	45.455	0.00	0.00	0.00	2.92
5013	12586	3.055458	TGTGAAGTATGGAAGGCGATCAA	60.055	43.478	0.00	0.00	0.00	2.57
5014	12587	3.938963	GTGAAGTATGGAAGGCGATCAAA	59.061	43.478	0.00	0.00	0.00	2.69
5015	12588	4.576463	GTGAAGTATGGAAGGCGATCAAAT	59.424	41.667	0.00	0.00	0.00	2.32
5016	12589	5.066505	GTGAAGTATGGAAGGCGATCAAATT	59.933	40.000	0.00	0.00	0.00	1.82
5017	12590	5.296780	TGAAGTATGGAAGGCGATCAAATTC	59.703	40.000	0.00	0.00	0.00	2.17
5018	12591	3.809832	AGTATGGAAGGCGATCAAATTCG	59.190	43.478	0.00	0.00	41.99	3.34
5019	12592	2.394930	TGGAAGGCGATCAAATTCGA	57.605	45.000	0.00	0.00	41.62	3.71
5020	12593	2.279741	TGGAAGGCGATCAAATTCGAG	58.720	47.619	0.00	0.00	41.62	4.04
5021	12594	2.280628	GGAAGGCGATCAAATTCGAGT	58.719	47.619	0.00	0.00	41.62	4.18
5022	12595	2.678336	GGAAGGCGATCAAATTCGAGTT	59.322	45.455	0.00	0.00	41.62	3.01
5023	12596	3.242446	GGAAGGCGATCAAATTCGAGTTC	60.242	47.826	0.00	0.09	41.62	3.01
5024	12597	1.927174	AGGCGATCAAATTCGAGTTCG	59.073	47.619	0.00	0.00	41.62	3.95
5033	12606	3.494378	TCGAGTTCGAGCCGGTAG	58.506	61.111	1.90	0.00	44.22	3.18
5034	12607	1.078918	TCGAGTTCGAGCCGGTAGA	60.079	57.895	1.90	0.00	44.22	2.59
5035	12608	0.463295	TCGAGTTCGAGCCGGTAGAT	60.463	55.000	1.90	0.00	44.22	1.98
5036	12609	1.202568	TCGAGTTCGAGCCGGTAGATA	60.203	52.381	1.90	0.00	44.22	1.98
5037	12610	1.070041	CGAGTTCGAGCCGGTAGATAC	60.070	57.143	1.90	0.00	43.02	2.24
5038	12611	2.220313	GAGTTCGAGCCGGTAGATACT	58.780	52.381	1.90	1.47	0.00	2.12
5039	12612	3.397482	GAGTTCGAGCCGGTAGATACTA	58.603	50.000	1.90	0.00	0.00	1.82
5040	12613	4.002316	GAGTTCGAGCCGGTAGATACTAT	58.998	47.826	1.90	0.00	0.00	2.12
5041	12614	4.396522	AGTTCGAGCCGGTAGATACTATT	58.603	43.478	1.90	0.00	0.00	1.73
5042	12615	4.215827	AGTTCGAGCCGGTAGATACTATTG	59.784	45.833	1.90	0.00	0.00	1.90
5043	12616	4.011966	TCGAGCCGGTAGATACTATTGA	57.988	45.455	1.90	0.00	0.00	2.57
5044	12617	4.586884	TCGAGCCGGTAGATACTATTGAT	58.413	43.478	1.90	0.00	0.00	2.57
5045	12618	5.737860	TCGAGCCGGTAGATACTATTGATA	58.262	41.667	1.90	0.00	0.00	2.15
5046	12619	6.175471	TCGAGCCGGTAGATACTATTGATAA	58.825	40.000	1.90	0.00	0.00	1.75
5047	12620	6.315642	TCGAGCCGGTAGATACTATTGATAAG	59.684	42.308	1.90	0.00	0.00	1.73
5048	12621	6.093771	CGAGCCGGTAGATACTATTGATAAGT	59.906	42.308	1.90	0.00	0.00	2.24
5049	12622	7.279536	CGAGCCGGTAGATACTATTGATAAGTA	59.720	40.741	1.90	0.00	34.11	2.24
5050	12623	8.508883	AGCCGGTAGATACTATTGATAAGTAG	57.491	38.462	1.90	0.00	33.15	2.57
5051	12624	8.327271	AGCCGGTAGATACTATTGATAAGTAGA	58.673	37.037	1.90	0.00	33.15	2.59
5052	12625	9.122779	GCCGGTAGATACTATTGATAAGTAGAT	57.877	37.037	1.90	0.00	33.15	1.98
5145	12718	9.577110	CTTAAATTAGATGCAGCTTTGAAATGA	57.423	29.630	11.02	0.00	0.00	2.57
5245	12823	3.589988	AGTTTGTCGCTCTCCAACTATG	58.410	45.455	0.00	0.00	0.00	2.23
5338	12916	6.072452	TGTTGCATCATATTTGTAACCGACAA	60.072	34.615	11.46	0.00	46.56	3.18
5421	12999	3.806380	TCCTTAACGCAAACCAGTAACA	58.194	40.909	0.00	0.00	0.00	2.41
5635	13387	5.357032	GGGTAGTTTCCCAGTTGTAATCATG	59.643	44.000	0.00	0.00	46.30	3.07
5672	13424	3.635373	TCCGGGTATGATCTAGTGTGAAC	59.365	47.826	0.00	0.00	0.00	3.18
5794	13704	2.726821	TGAAATCAATCCAGTGCCCTC	58.273	47.619	0.00	0.00	0.00	4.30
5968	13908	7.507733	AGATTTCCTAGCTTATGCAGAAATG	57.492	36.000	20.78	0.00	41.37	2.32
6105	14100	2.137177	TACCAGAAGCAAGCCCACCC	62.137	60.000	0.00	0.00	0.00	4.61
6163	14610	2.002505	AGATAGATCCACCACCTCCG	57.997	55.000	0.00	0.00	0.00	4.63
6173	14620	1.153168	CCACCTCCGCGAATCCAAT	60.153	57.895	8.23	0.00	0.00	3.16
6178	14625	0.882042	CTCCGCGAATCCAATGGAGG	60.882	60.000	8.23	2.94	42.00	4.30
6219	14666	1.134250	TCAATGAATTCCGATCCGCCA	60.134	47.619	2.27	0.00	0.00	5.69
6229	14676	1.595382	GATCCGCCATCCCGAACTG	60.595	63.158	0.00	0.00	0.00	3.16
6274	14721	4.643387	GAGGTTGGTGCGCCTGGT	62.643	66.667	18.96	0.00	34.81	4.00
6305	14752	1.587054	CTCGAGGTCCTTTGCGAGT	59.413	57.895	16.65	0.00	43.65	4.18
6786	15233	4.168291	GGAAGGAGGGAGCGGCAG	62.168	72.222	1.45	0.00	0.00	4.85
6787	15234	4.168291	GAAGGAGGGAGCGGCAGG	62.168	72.222	1.45	0.00	0.00	4.85
6801	15248	4.105727	CAGGCTGTGCTCGAGATG	57.894	61.111	18.75	3.32	0.00	2.90
6802	15249	1.521010	CAGGCTGTGCTCGAGATGG	60.521	63.158	18.75	3.70	0.00	3.51
6803	15250	2.202987	GGCTGTGCTCGAGATGGG	60.203	66.667	18.75	4.08	0.00	4.00
6804	15251	2.725312	GGCTGTGCTCGAGATGGGA	61.725	63.158	18.75	0.00	0.00	4.37
6805	15252	1.445095	GCTGTGCTCGAGATGGGAT	59.555	57.895	18.75	0.00	0.00	3.85
6806	15253	0.599728	GCTGTGCTCGAGATGGGATC	60.600	60.000	18.75	0.00	0.00	3.36
6807	15254	0.318529	CTGTGCTCGAGATGGGATCG	60.319	60.000	18.75	0.00	41.50	3.69
6808	15255	0.751643	TGTGCTCGAGATGGGATCGA	60.752	55.000	18.75	0.00	46.26	3.59
6812	15259	3.821306	TCGAGATGGGATCGAGGAA	57.179	52.632	0.00	0.00	43.79	3.36
6813	15260	1.610363	TCGAGATGGGATCGAGGAAG	58.390	55.000	0.00	0.00	43.79	3.46
6814	15261	0.038709	CGAGATGGGATCGAGGAAGC	60.039	60.000	0.00	0.00	42.76	3.86
6815	15262	1.337118	GAGATGGGATCGAGGAAGCT	58.663	55.000	0.00	0.00	0.00	3.74
6816	15263	1.000731	GAGATGGGATCGAGGAAGCTG	59.999	57.143	0.00	0.00	0.00	4.24
6817	15264	0.034616	GATGGGATCGAGGAAGCTGG	59.965	60.000	0.00	0.00	0.00	4.85
6818	15265	1.414061	ATGGGATCGAGGAAGCTGGG	61.414	60.000	0.00	0.00	0.00	4.45
6819	15266	1.762460	GGGATCGAGGAAGCTGGGA	60.762	63.158	0.00	0.00	0.00	4.37
6820	15267	1.124477	GGGATCGAGGAAGCTGGGAT	61.124	60.000	0.00	0.00	0.00	3.85
6821	15268	0.761802	GGATCGAGGAAGCTGGGATT	59.238	55.000	0.00	0.00	0.00	3.01
6822	15269	1.141858	GGATCGAGGAAGCTGGGATTT	59.858	52.381	0.00	0.00	0.00	2.17
6823	15270	2.422093	GGATCGAGGAAGCTGGGATTTT	60.422	50.000	0.00	0.00	0.00	1.82
6824	15271	2.879103	TCGAGGAAGCTGGGATTTTT	57.121	45.000	0.00	0.00	0.00	1.94
6848	15295	4.737855	TTCTTTTCTCTCCTCCATACCG	57.262	45.455	0.00	0.00	0.00	4.02
6849	15296	3.031736	TCTTTTCTCTCCTCCATACCGG	58.968	50.000	0.00	0.00	0.00	5.28
6850	15297	2.544844	TTTCTCTCCTCCATACCGGT	57.455	50.000	13.98	13.98	35.57	5.28
6851	15298	2.544844	TTCTCTCCTCCATACCGGTT	57.455	50.000	15.04	0.00	35.57	4.44
6852	15299	2.544844	TCTCTCCTCCATACCGGTTT	57.455	50.000	15.04	0.14	35.57	3.27
6853	15300	2.108168	TCTCTCCTCCATACCGGTTTG	58.892	52.381	15.04	16.37	35.57	2.93
6854	15301	1.139058	CTCTCCTCCATACCGGTTTGG	59.861	57.143	31.72	31.72	46.41	3.28
6855	15302	0.180406	CTCCTCCATACCGGTTTGGG	59.820	60.000	34.80	26.31	44.64	4.12
6856	15303	1.453197	CCTCCATACCGGTTTGGGC	60.453	63.158	34.80	0.00	44.64	5.36
6857	15304	1.607612	CTCCATACCGGTTTGGGCT	59.392	57.895	34.80	3.92	44.64	5.19
6858	15305	0.748005	CTCCATACCGGTTTGGGCTG	60.748	60.000	34.80	23.72	44.64	4.85
6859	15306	1.202099	TCCATACCGGTTTGGGCTGA	61.202	55.000	34.80	18.86	44.64	4.26
6860	15307	1.029947	CCATACCGGTTTGGGCTGAC	61.030	60.000	30.41	0.00	44.64	3.51
6861	15308	0.035439	CATACCGGTTTGGGCTGACT	60.035	55.000	15.04	0.00	44.64	3.41
6862	15309	0.696501	ATACCGGTTTGGGCTGACTT	59.303	50.000	15.04	0.00	44.64	3.01
6863	15310	1.350071	TACCGGTTTGGGCTGACTTA	58.650	50.000	15.04	0.00	44.64	2.24
6864	15311	0.696501	ACCGGTTTGGGCTGACTTAT	59.303	50.000	0.00	0.00	44.64	1.73
6865	15312	1.094785	CCGGTTTGGGCTGACTTATG	58.905	55.000	0.00	0.00	0.00	1.90
6866	15313	0.451783	CGGTTTGGGCTGACTTATGC	59.548	55.000	0.00	0.00	0.00	3.14
6871	15318	4.445699	GGCTGACTTATGCCGAGG	57.554	61.111	0.00	0.00	39.71	4.63
6872	15319	1.823295	GGCTGACTTATGCCGAGGA	59.177	57.895	0.00	0.00	39.71	3.71
6873	15320	0.530870	GGCTGACTTATGCCGAGGAC	60.531	60.000	0.00	0.00	39.71	3.85
6874	15321	0.461961	GCTGACTTATGCCGAGGACT	59.538	55.000	0.00	0.00	0.00	3.85
6875	15322	1.681793	GCTGACTTATGCCGAGGACTA	59.318	52.381	0.00	0.00	0.00	2.59
6876	15323	2.287909	GCTGACTTATGCCGAGGACTAG	60.288	54.545	0.00	0.00	0.00	2.57
6877	15324	2.294791	CTGACTTATGCCGAGGACTAGG	59.705	54.545	0.00	0.00	0.00	3.02
6878	15325	1.614413	GACTTATGCCGAGGACTAGGG	59.386	57.143	0.00	0.00	0.00	3.53
6880	15327	0.105658	TTATGCCGAGGACTAGGGCT	60.106	55.000	13.09	4.28	46.97	5.19
6881	15328	0.827925	TATGCCGAGGACTAGGGCTG	60.828	60.000	13.09	0.00	46.97	4.85
6882	15329	2.442272	GCCGAGGACTAGGGCTGA	60.442	66.667	6.62	0.00	43.52	4.26
6883	15330	2.058595	GCCGAGGACTAGGGCTGAA	61.059	63.158	6.62	0.00	43.52	3.02
6884	15331	1.403687	GCCGAGGACTAGGGCTGAAT	61.404	60.000	6.62	0.00	43.52	2.57
6885	15332	1.996798	CCGAGGACTAGGGCTGAATA	58.003	55.000	0.00	0.00	0.00	1.75
6886	15333	1.889829	CCGAGGACTAGGGCTGAATAG	59.110	57.143	0.00	0.00	0.00	1.73
6901	15348	5.295431	CTGAATAGCAAAAACATCACGGA	57.705	39.130	0.00	0.00	0.00	4.69
6902	15349	5.041951	TGAATAGCAAAAACATCACGGAC	57.958	39.130	0.00	0.00	0.00	4.79
6903	15350	4.759693	TGAATAGCAAAAACATCACGGACT	59.240	37.500	0.00	0.00	0.00	3.85
6904	15351	5.240623	TGAATAGCAAAAACATCACGGACTT	59.759	36.000	0.00	0.00	0.00	3.01
6905	15352	5.705609	ATAGCAAAAACATCACGGACTTT	57.294	34.783	0.00	0.00	0.00	2.66
6906	15353	4.385358	AGCAAAAACATCACGGACTTTT	57.615	36.364	0.00	0.00	0.00	2.27
6907	15354	4.754322	AGCAAAAACATCACGGACTTTTT	58.246	34.783	0.00	0.00	0.00	1.94
6927	15374	3.890705	TTTGCAAAAACGCTAACAACG	57.109	38.095	10.02	0.00	0.00	4.10
6929	15376	3.670311	TGCAAAAACGCTAACAACGTA	57.330	38.095	0.00	0.00	44.30	3.57
6930	15377	3.352652	TGCAAAAACGCTAACAACGTAC	58.647	40.909	0.00	0.00	44.30	3.67
6931	15378	2.394898	GCAAAAACGCTAACAACGTACG	59.605	45.455	15.01	15.01	44.30	3.67
6932	15379	3.840662	GCAAAAACGCTAACAACGTACGA	60.841	43.478	24.41	0.00	44.30	3.43
6933	15380	3.487985	AAAACGCTAACAACGTACGAC	57.512	42.857	24.41	1.11	44.30	4.34
6934	15381	1.408422	AACGCTAACAACGTACGACC	58.592	50.000	24.41	0.78	44.30	4.79
6935	15382	0.310543	ACGCTAACAACGTACGACCA	59.689	50.000	24.41	1.03	43.02	4.02
6936	15383	0.979811	CGCTAACAACGTACGACCAG	59.020	55.000	24.41	11.79	0.00	4.00
6937	15384	1.400113	CGCTAACAACGTACGACCAGA	60.400	52.381	24.41	3.02	0.00	3.86
6938	15385	2.664916	GCTAACAACGTACGACCAGAA	58.335	47.619	24.41	1.61	0.00	3.02
6939	15386	3.052036	GCTAACAACGTACGACCAGAAA	58.948	45.455	24.41	0.00	0.00	2.52
6940	15387	3.121227	GCTAACAACGTACGACCAGAAAC	60.121	47.826	24.41	0.97	0.00	2.78
6941	15388	1.856802	ACAACGTACGACCAGAAACC	58.143	50.000	24.41	0.00	0.00	3.27
6942	15389	1.136695	ACAACGTACGACCAGAAACCA	59.863	47.619	24.41	0.00	0.00	3.67
6943	15390	2.203401	CAACGTACGACCAGAAACCAA	58.797	47.619	24.41	0.00	0.00	3.67
6944	15391	2.600470	ACGTACGACCAGAAACCAAA	57.400	45.000	24.41	0.00	0.00	3.28
6945	15392	3.116079	ACGTACGACCAGAAACCAAAT	57.884	42.857	24.41	0.00	0.00	2.32
6946	15393	3.469739	ACGTACGACCAGAAACCAAATT	58.530	40.909	24.41	0.00	0.00	1.82
6947	15394	3.878699	ACGTACGACCAGAAACCAAATTT	59.121	39.130	24.41	0.00	0.00	1.82
6948	15395	4.336153	ACGTACGACCAGAAACCAAATTTT	59.664	37.500	24.41	0.00	0.00	1.82
6949	15396	4.907582	CGTACGACCAGAAACCAAATTTTC	59.092	41.667	10.44	0.00	35.97	2.29
6950	15397	5.277634	CGTACGACCAGAAACCAAATTTTCT	60.278	40.000	10.44	0.00	44.98	2.52
6951	15398	5.592104	ACGACCAGAAACCAAATTTTCTT	57.408	34.783	0.00	0.00	42.09	2.52
6952	15399	5.972935	ACGACCAGAAACCAAATTTTCTTT	58.027	33.333	0.00	0.00	42.09	2.52
6953	15400	7.102847	ACGACCAGAAACCAAATTTTCTTTA	57.897	32.000	0.00	0.00	42.09	1.85
6954	15401	6.976349	ACGACCAGAAACCAAATTTTCTTTAC	59.024	34.615	0.00	0.00	42.09	2.01
6955	15402	7.147966	ACGACCAGAAACCAAATTTTCTTTACT	60.148	33.333	0.00	0.00	42.09	2.24
6956	15403	8.347035	CGACCAGAAACCAAATTTTCTTTACTA	58.653	33.333	0.00	0.00	42.09	1.82
7180	15629	7.816995	TCATAATCACAGTTAAAATGCCCAAAC	59.183	33.333	0.00	0.00	0.00	2.93
7190	15639	2.134789	ATGCCCAAACAGACTGATCC	57.865	50.000	10.08	0.00	0.00	3.36
7224	15674	5.509622	GCAAAAGATTAGCACGAGAATCAAC	59.490	40.000	0.00	0.00	35.00	3.18
7265	15716	4.535526	AAACTGGTGTTTTCTGCAAACT	57.464	36.364	4.66	0.00	44.68	2.66
7275	15726	6.688813	GTGTTTTCTGCAAACTTAGACTTCAG	59.311	38.462	4.66	0.00	44.68	3.02
7309	15760	3.817084	TCTGCAATTCACTCTTGTTGAGG	59.183	43.478	0.00	0.00	46.72	3.86
7608	16059	5.001232	TCTAGTTTAGGCTTGAATTTGCGT	58.999	37.500	0.00	0.00	0.00	5.24
7654	16105	4.009675	GACACATGTTTCATTGCCCTCTA	58.990	43.478	7.13	0.00	0.00	2.43
7724	16175	4.973168	ACACAGTATCAAGTCATGTGGTT	58.027	39.130	8.33	0.00	44.27	3.67
7765	16216	2.557924	TGAGGTTCATTTGCATGTGACC	59.442	45.455	1.40	4.77	37.67	4.02
7767	16218	1.269448	GGTTCATTTGCATGTGACCGT	59.731	47.619	1.40	0.00	32.11	4.83
7859	16310	5.010516	TCAATTGGTTATGTTGTTCCAGTGG	59.989	40.000	1.40	1.40	0.00	4.00
8013	16464	5.717119	AAGTATCTGATAAAGGGTTGGCT	57.283	39.130	0.00	0.00	0.00	4.75
8047	16498	2.720915	GCCTTCCTCAGCTTGAAGAAT	58.279	47.619	15.60	0.00	40.30	2.40
8102	16553	7.820044	ATTTTTGCGAGTTAGTTGACAAAAA	57.180	28.000	16.67	16.67	45.50	1.94
8137	16588	8.071177	ACTGAAATGCTTTAGGCTAAATGAAT	57.929	30.769	19.32	11.03	42.39	2.57
8202	16653	0.250234	TGGAGATTGACCCAGAAGCG	59.750	55.000	0.00	0.00	0.00	4.68
8339	16790	3.441163	ACATACGTATGTGCTACAACCG	58.559	45.455	34.29	9.56	44.66	4.44
8528	16979	2.578786	TGTGGTCATGGATGATGATGC	58.421	47.619	0.00	0.00	43.20	3.91
8669	17120	3.492137	GGGATTTGGAGCTGAAATGATGC	60.492	47.826	0.00	0.00	0.00	3.91
8745	17197	6.765512	TGTTATGTGTGATTCTCTTGTGTTCA	59.234	34.615	0.00	0.00	0.00	3.18
9172	17635	8.213518	GATGTTGCACATCCTTTATTCTAGAA	57.786	34.615	7.82	7.82	46.99	2.10
9225	17722	4.219115	CCTCTTGGCTGTCTAGAATAGGA	58.781	47.826	0.00	0.00	39.78	2.94
9258	17755	8.821686	TTTGGATGCTTGAAGATTAATCCTAA	57.178	30.769	11.92	11.05	35.61	2.69
9380	17877	3.770933	AGGCAATGCTGATTTAACCATGT	59.229	39.130	4.82	0.00	0.00	3.21
9382	17879	4.497300	GCAATGCTGATTTAACCATGTGT	58.503	39.130	0.00	0.00	0.00	3.72
9433	17950	7.446319	TGTTCTCAGTTCATCACAGAATCATTT	59.554	33.333	0.00	0.00	0.00	2.32
9483	18001	8.312564	AGATATCTGATGTATGTTCATCACAGG	58.687	37.037	3.89	0.00	45.89	4.00
9547	18065	6.260271	GGATAACCAGGCTAGAAAATACACAC	59.740	42.308	0.00	0.00	35.97	3.82
9548	18066	4.634012	ACCAGGCTAGAAAATACACACA	57.366	40.909	0.00	0.00	0.00	3.72
9549	18067	4.324267	ACCAGGCTAGAAAATACACACAC	58.676	43.478	0.00	0.00	0.00	3.82
9550	18068	4.202419	ACCAGGCTAGAAAATACACACACA	60.202	41.667	0.00	0.00	0.00	3.72
9551	18069	4.154195	CCAGGCTAGAAAATACACACACAC	59.846	45.833	0.00	0.00	0.00	3.82
9552	18070	4.754618	CAGGCTAGAAAATACACACACACA	59.245	41.667	0.00	0.00	0.00	3.72
9553	18071	5.238432	CAGGCTAGAAAATACACACACACAA	59.762	40.000	0.00	0.00	0.00	3.33
9554	18072	5.825679	AGGCTAGAAAATACACACACACAAA	59.174	36.000	0.00	0.00	0.00	2.83

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
0	1	1.478916	TGATCAATAGTGCCGGTTCGA	59.521	47.619	1.90	0.00	0.00	3.71
1	2	1.593006	GTGATCAATAGTGCCGGTTCG	59.407	52.381	1.90	0.00	0.00	3.95
2	3	2.627945	TGTGATCAATAGTGCCGGTTC	58.372	47.619	1.90	0.00	0.00	3.62
5	6	4.212004	CACTAATGTGATCAATAGTGCCGG	59.788	45.833	21.82	0.00	45.12	6.13
11	12	4.380531	ACCGGCACTAATGTGATCAATAG	58.619	43.478	0.00	3.49	46.55	1.73
12	13	4.415881	ACCGGCACTAATGTGATCAATA	57.584	40.909	0.00	0.00	46.55	1.90
13	14	3.281727	ACCGGCACTAATGTGATCAAT	57.718	42.857	0.00	0.00	46.55	2.57
14	15	2.779755	ACCGGCACTAATGTGATCAA	57.220	45.000	0.00	0.00	46.55	2.57
15	16	2.779755	AACCGGCACTAATGTGATCA	57.220	45.000	0.00	0.00	46.55	2.92
16	17	4.434713	AAAAACCGGCACTAATGTGATC	57.565	40.909	0.00	0.00	46.55	2.92
37	38	4.491234	CACATTAGTGCCGGTTTGTAAA	57.509	40.909	1.90	0.00	39.21	2.01
49	50	4.211389	GTCAAACGTGAAGCACATTAGTG	58.789	43.478	0.00	0.00	41.33	2.74
50	51	3.250040	GGTCAAACGTGAAGCACATTAGT	59.750	43.478	0.00	0.00	34.87	2.24
51	52	3.364964	GGGTCAAACGTGAAGCACATTAG	60.365	47.826	0.00	0.00	34.87	1.73
52	53	2.550606	GGGTCAAACGTGAAGCACATTA	59.449	45.455	0.00	0.00	34.87	1.90
53	54	1.336755	GGGTCAAACGTGAAGCACATT	59.663	47.619	0.00	0.00	34.87	2.71
55	56	0.107410	AGGGTCAAACGTGAAGCACA	60.107	50.000	0.00	0.00	34.87	4.57
56	57	1.021968	AAGGGTCAAACGTGAAGCAC	58.978	50.000	0.00	0.00	34.87	4.40
57	58	1.757682	AAAGGGTCAAACGTGAAGCA	58.242	45.000	0.00	0.00	34.87	3.91
58	59	2.863401	AAAAGGGTCAAACGTGAAGC	57.137	45.000	0.00	0.00	34.87	3.86
60	61	5.187687	AGTAGAAAAAGGGTCAAACGTGAA	58.812	37.500	0.00	0.00	34.87	3.18
61	62	4.773013	AGTAGAAAAAGGGTCAAACGTGA	58.227	39.130	0.00	0.00	0.00	4.35
62	63	5.756833	ACTAGTAGAAAAAGGGTCAAACGTG	59.243	40.000	3.59	0.00	0.00	4.49
65	66	8.667076	TTACACTAGTAGAAAAAGGGTCAAAC	57.333	34.615	3.59	0.00	0.00	2.93
66	67	9.112725	GTTTACACTAGTAGAAAAAGGGTCAAA	57.887	33.333	3.59	0.00	0.00	2.69
67	68	8.488668	AGTTTACACTAGTAGAAAAAGGGTCAA	58.511	33.333	3.59	0.00	0.00	3.18
68	69	7.929785	CAGTTTACACTAGTAGAAAAAGGGTCA	59.070	37.037	3.59	0.00	0.00	4.02
69	70	8.146412	TCAGTTTACACTAGTAGAAAAAGGGTC	58.854	37.037	3.59	0.00	0.00	4.46
70	71	7.930325	GTCAGTTTACACTAGTAGAAAAAGGGT	59.070	37.037	3.59	0.00	0.00	4.34
71	72	8.148999	AGTCAGTTTACACTAGTAGAAAAAGGG	58.851	37.037	3.59	0.00	0.00	3.95
72	73	9.543783	AAGTCAGTTTACACTAGTAGAAAAAGG	57.456	33.333	3.59	0.00	0.00	3.11
122	123	5.155278	TCTATTTTGAAACGGAGGCAGTA	57.845	39.130	0.00	0.00	0.00	2.74
125	126	4.394920	GTCATCTATTTTGAAACGGAGGCA	59.605	41.667	0.00	0.00	0.00	4.75
126	127	4.636206	AGTCATCTATTTTGAAACGGAGGC	59.364	41.667	0.00	0.00	0.00	4.70
168	169	9.778741	TCAAAATAGATGACTCAACTTTGTACT	57.221	29.630	0.00	0.00	0.00	2.73
171	172	9.736023	GTTTCAAAATAGATGACTCAACTTTGT	57.264	29.630	0.00	0.00	0.00	2.83
173	174	9.956720	CTGTTTCAAAATAGATGACTCAACTTT	57.043	29.630	0.00	0.00	29.67	2.66
174	175	9.342308	TCTGTTTCAAAATAGATGACTCAACTT	57.658	29.630	0.00	0.00	32.24	2.66
175	176	8.908786	TCTGTTTCAAAATAGATGACTCAACT	57.091	30.769	0.00	0.00	32.24	3.16
176	177	9.950680	TTTCTGTTTCAAAATAGATGACTCAAC	57.049	29.630	3.24	0.00	36.29	3.18
178	179	9.559732	TCTTTCTGTTTCAAAATAGATGACTCA	57.440	29.630	3.24	0.00	36.29	3.41
199	200	9.123709	CGCACAAGTCTAGATAGATATTCTTTC	57.876	37.037	0.00	0.00	34.39	2.62
200	201	7.596995	GCGCACAAGTCTAGATAGATATTCTTT	59.403	37.037	0.30	0.00	34.39	2.52
201	202	7.087639	GCGCACAAGTCTAGATAGATATTCTT	58.912	38.462	0.30	0.00	34.39	2.52
202	203	6.349777	GGCGCACAAGTCTAGATAGATATTCT	60.350	42.308	10.83	0.00	34.39	2.40
204	205	5.243954	TGGCGCACAAGTCTAGATAGATATT	59.756	40.000	10.83	0.00	34.39	1.28
205	206	4.767409	TGGCGCACAAGTCTAGATAGATAT	59.233	41.667	10.83	0.00	34.39	1.63
763	4402	1.102978	AAACTTGCGTCTGGTTTGCT	58.897	45.000	0.00	0.00	32.84	3.91
801	4440	4.974989	GTCCGTTTGGCGTCCGGT	62.975	66.667	0.00	0.00	42.30	5.28
897	4536	0.734889	CCAACTCCAACGCATGATCC	59.265	55.000	0.00	0.00	0.00	3.36
1033	4675	2.982130	GTCTGACTGCATCCCGGT	59.018	61.111	0.00	0.00	35.17	5.28
1184	4826	1.457643	CCGGCCTCCAGGATGTCTA	60.458	63.158	0.00	0.00	37.39	2.59
1439	5796	3.825308	CACGACCAAAATTGTCATCTGG	58.175	45.455	0.00	0.00	0.00	3.86
1455	5812	2.579207	TAATCTACCTGCAGCACGAC	57.421	50.000	8.66	0.00	0.00	4.34
1504	5867	5.822132	AGCATATATCAGCAGGAGACTTT	57.178	39.130	2.61	0.00	40.21	2.66
1570	5934	6.474751	GCAGAAATAAAAGGATGCAGAATGAC	59.525	38.462	0.00	0.00	39.69	3.06
1571	5935	6.153170	TGCAGAAATAAAAGGATGCAGAATGA	59.847	34.615	0.00	0.00	39.69	2.57
1612	5979	8.624776	ACAAAGGAGTAAATCTGAAGTTCAAAG	58.375	33.333	7.06	0.00	0.00	2.77
1620	5987	5.938125	GGCACTACAAAGGAGTAAATCTGAA	59.062	40.000	0.00	0.00	0.00	3.02
1630	5997	4.520492	ACATCAAAAGGCACTACAAAGGAG	59.480	41.667	0.00	0.00	38.49	3.69
1631	5998	4.278170	CACATCAAAAGGCACTACAAAGGA	59.722	41.667	0.00	0.00	38.49	3.36
1632	5999	4.549458	CACATCAAAAGGCACTACAAAGG	58.451	43.478	0.00	0.00	38.49	3.11
1712	6080	4.846779	AATTACCACGTGCACAATTTCT	57.153	36.364	18.64	0.00	0.00	2.52
1724	6092	8.619146	TTCTGTACGAAATACTAATTACCACG	57.381	34.615	0.00	0.00	34.56	4.94
1939	6338	1.396996	CCGCAACAAGTAATTCCGGAG	59.603	52.381	3.34	0.00	36.55	4.63
1940	6339	1.002201	TCCGCAACAAGTAATTCCGGA	59.998	47.619	0.00	0.00	40.62	5.14
1941	6340	1.444836	TCCGCAACAAGTAATTCCGG	58.555	50.000	0.00	0.00	35.83	5.14
1942	6341	3.757745	ATTCCGCAACAAGTAATTCCG	57.242	42.857	0.00	0.00	0.00	4.30
1943	6342	4.082463	TCCAATTCCGCAACAAGTAATTCC	60.082	41.667	0.00	0.00	0.00	3.01
1944	6343	5.054390	TCCAATTCCGCAACAAGTAATTC	57.946	39.130	0.00	0.00	0.00	2.17
1945	6344	5.659440	ATCCAATTCCGCAACAAGTAATT	57.341	34.783	0.00	0.00	0.00	1.40
1946	6345	6.767524	TTATCCAATTCCGCAACAAGTAAT	57.232	33.333	0.00	0.00	0.00	1.89
1947	6346	6.576662	TTTATCCAATTCCGCAACAAGTAA	57.423	33.333	0.00	0.00	0.00	2.24
1948	6347	6.576662	TTTTATCCAATTCCGCAACAAGTA	57.423	33.333	0.00	0.00	0.00	2.24
1949	6348	5.461032	TTTTATCCAATTCCGCAACAAGT	57.539	34.783	0.00	0.00	0.00	3.16
1950	6349	6.183360	CCATTTTTATCCAATTCCGCAACAAG	60.183	38.462	0.00	0.00	0.00	3.16
1951	6350	5.641209	CCATTTTTATCCAATTCCGCAACAA	59.359	36.000	0.00	0.00	0.00	2.83
1952	6351	5.047021	TCCATTTTTATCCAATTCCGCAACA	60.047	36.000	0.00	0.00	0.00	3.33
1953	6352	5.415221	TCCATTTTTATCCAATTCCGCAAC	58.585	37.500	0.00	0.00	0.00	4.17
1954	6353	5.667539	TCCATTTTTATCCAATTCCGCAA	57.332	34.783	0.00	0.00	0.00	4.85
1955	6354	5.128499	ACATCCATTTTTATCCAATTCCGCA	59.872	36.000	0.00	0.00	0.00	5.69
1956	6355	5.600696	ACATCCATTTTTATCCAATTCCGC	58.399	37.500	0.00	0.00	0.00	5.54
1957	6356	8.796475	AGATACATCCATTTTTATCCAATTCCG	58.204	33.333	0.00	0.00	0.00	4.30
1985	6384	6.645827	GTGTCCTAGACAGAACCTTTTAGTTC	59.354	42.308	0.00	0.00	43.57	3.01
1986	6385	6.099269	TGTGTCCTAGACAGAACCTTTTAGTT	59.901	38.462	0.00	0.00	43.57	2.24
1987	6386	5.601313	TGTGTCCTAGACAGAACCTTTTAGT	59.399	40.000	0.00	0.00	43.57	2.24
1988	6387	6.097915	TGTGTCCTAGACAGAACCTTTTAG	57.902	41.667	0.00	0.00	43.57	1.85
1989	6388	6.497259	AGATGTGTCCTAGACAGAACCTTTTA	59.503	38.462	0.00	0.00	43.57	1.52
1990	6389	5.308237	AGATGTGTCCTAGACAGAACCTTTT	59.692	40.000	0.00	0.00	43.57	2.27
1991	6390	4.841246	AGATGTGTCCTAGACAGAACCTTT	59.159	41.667	0.00	0.00	43.57	3.11
1992	6391	4.421131	AGATGTGTCCTAGACAGAACCTT	58.579	43.478	0.00	0.00	43.57	3.50
1993	6392	4.054359	AGATGTGTCCTAGACAGAACCT	57.946	45.455	0.00	0.00	43.57	3.50
1994	6393	5.194432	TCTAGATGTGTCCTAGACAGAACC	58.806	45.833	0.00	0.00	43.57	3.62
1995	6394	6.734137	CATCTAGATGTGTCCTAGACAGAAC	58.266	44.000	22.42	0.00	43.57	3.01
1996	6395	6.951062	CATCTAGATGTGTCCTAGACAGAA	57.049	41.667	22.42	0.00	43.57	3.02
2037	6436	6.365970	AACAGAGTGGACATCAGTTTAGAT	57.634	37.500	0.00	0.00	0.00	1.98
2038	6437	5.808366	AACAGAGTGGACATCAGTTTAGA	57.192	39.130	0.00	0.00	0.00	2.10
2039	6438	5.760253	ACAAACAGAGTGGACATCAGTTTAG	59.240	40.000	0.00	0.00	35.12	1.85
2040	6439	5.527214	CACAAACAGAGTGGACATCAGTTTA	59.473	40.000	0.00	0.00	35.12	2.01
2041	6440	4.336433	CACAAACAGAGTGGACATCAGTTT	59.664	41.667	0.00	0.00	37.00	2.66
2042	6441	3.879295	CACAAACAGAGTGGACATCAGTT	59.121	43.478	0.00	0.00	33.43	3.16
2043	6442	3.470709	CACAAACAGAGTGGACATCAGT	58.529	45.455	0.00	0.00	33.43	3.41
2052	6451	6.867662	AGAAATTAGACCACAAACAGAGTG	57.132	37.500	0.00	0.00	36.76	3.51
2053	6452	7.881775	AAAGAAATTAGACCACAAACAGAGT	57.118	32.000	0.00	0.00	0.00	3.24
2054	6453	8.190784	ACAAAAGAAATTAGACCACAAACAGAG	58.809	33.333	0.00	0.00	0.00	3.35
2055	6454	8.062065	ACAAAAGAAATTAGACCACAAACAGA	57.938	30.769	0.00	0.00	0.00	3.41
2056	6455	7.435192	GGACAAAAGAAATTAGACCACAAACAG	59.565	37.037	0.00	0.00	0.00	3.16
2057	6456	7.123547	AGGACAAAAGAAATTAGACCACAAACA	59.876	33.333	0.00	0.00	0.00	2.83
2058	6457	7.489160	AGGACAAAAGAAATTAGACCACAAAC	58.511	34.615	0.00	0.00	0.00	2.93
2059	6458	7.654022	AGGACAAAAGAAATTAGACCACAAA	57.346	32.000	0.00	0.00	0.00	2.83
2060	6459	8.934023	ATAGGACAAAAGAAATTAGACCACAA	57.066	30.769	0.00	0.00	0.00	3.33
2061	6460	8.934023	AATAGGACAAAAGAAATTAGACCACA	57.066	30.769	0.00	0.00	0.00	4.17
2110	6509	9.533831	TCACATCTAAGCTCTCACCAATATATA	57.466	33.333	0.00	0.00	0.00	0.86
2111	6510	8.310382	GTCACATCTAAGCTCTCACCAATATAT	58.690	37.037	0.00	0.00	0.00	0.86
2112	6511	7.287696	TGTCACATCTAAGCTCTCACCAATATA	59.712	37.037	0.00	0.00	0.00	0.86
2113	6512	6.098838	TGTCACATCTAAGCTCTCACCAATAT	59.901	38.462	0.00	0.00	0.00	1.28
2114	6513	5.422012	TGTCACATCTAAGCTCTCACCAATA	59.578	40.000	0.00	0.00	0.00	1.90
2115	6514	4.223700	TGTCACATCTAAGCTCTCACCAAT	59.776	41.667	0.00	0.00	0.00	3.16
2116	6515	3.578282	TGTCACATCTAAGCTCTCACCAA	59.422	43.478	0.00	0.00	0.00	3.67
2117	6516	3.165071	TGTCACATCTAAGCTCTCACCA	58.835	45.455	0.00	0.00	0.00	4.17
2118	6517	3.876274	TGTCACATCTAAGCTCTCACC	57.124	47.619	0.00	0.00	0.00	4.02
2119	6518	4.099266	AGGATGTCACATCTAAGCTCTCAC	59.901	45.833	17.46	0.00	0.00	3.51
2120	6519	4.285020	AGGATGTCACATCTAAGCTCTCA	58.715	43.478	17.46	0.00	0.00	3.27
2121	6520	4.935352	AGGATGTCACATCTAAGCTCTC	57.065	45.455	17.46	0.00	0.00	3.20
2122	6521	6.798427	TTAAGGATGTCACATCTAAGCTCT	57.202	37.500	17.46	2.09	0.00	4.09
2123	6522	7.849804	TTTTAAGGATGTCACATCTAAGCTC	57.150	36.000	17.46	0.00	0.00	4.09
2166	6565	9.840427	CTGGACGTATTTAATTTCATTTTGTCT	57.160	29.630	0.00	0.00	0.00	3.41
2167	6566	9.834628	TCTGGACGTATTTAATTTCATTTTGTC	57.165	29.630	0.00	0.00	0.00	3.18
2174	6573	9.268268	GGATGTATCTGGACGTATTTAATTTCA	57.732	33.333	0.00	0.00	0.00	2.69
2175	6574	9.268268	TGGATGTATCTGGACGTATTTAATTTC	57.732	33.333	0.00	0.00	0.00	2.17
2176	6575	9.793259	ATGGATGTATCTGGACGTATTTAATTT	57.207	29.630	0.00	0.00	0.00	1.82
2177	6576	9.793259	AATGGATGTATCTGGACGTATTTAATT	57.207	29.630	0.00	0.00	0.00	1.40
2178	6577	9.793259	AAATGGATGTATCTGGACGTATTTAAT	57.207	29.630	0.00	0.00	0.00	1.40
2179	6578	9.268268	GAAATGGATGTATCTGGACGTATTTAA	57.732	33.333	0.00	0.00	0.00	1.52
2180	6579	7.876068	GGAAATGGATGTATCTGGACGTATTTA	59.124	37.037	0.00	0.00	0.00	1.40
2181	6580	6.710744	GGAAATGGATGTATCTGGACGTATTT	59.289	38.462	0.00	0.00	0.00	1.40
2182	6581	6.231211	GGAAATGGATGTATCTGGACGTATT	58.769	40.000	0.00	0.00	0.00	1.89
2183	6582	5.566826	CGGAAATGGATGTATCTGGACGTAT	60.567	44.000	0.00	0.00	0.00	3.06
2184	6583	4.261867	CGGAAATGGATGTATCTGGACGTA	60.262	45.833	0.00	0.00	0.00	3.57
2185	6584	3.492656	CGGAAATGGATGTATCTGGACGT	60.493	47.826	0.00	0.00	0.00	4.34
2186	6585	3.059884	CGGAAATGGATGTATCTGGACG	58.940	50.000	0.00	0.00	0.00	4.79
2187	6586	2.808543	GCGGAAATGGATGTATCTGGAC	59.191	50.000	0.00	0.00	0.00	4.02
2188	6587	2.547855	CGCGGAAATGGATGTATCTGGA	60.548	50.000	0.00	0.00	0.00	3.86
2189	6588	1.800586	CGCGGAAATGGATGTATCTGG	59.199	52.381	0.00	0.00	0.00	3.86
2190	6589	2.476619	GTCGCGGAAATGGATGTATCTG	59.523	50.000	6.13	0.00	0.00	2.90
2191	6590	2.102420	TGTCGCGGAAATGGATGTATCT	59.898	45.455	6.13	0.00	0.00	1.98
2192	6591	2.479837	TGTCGCGGAAATGGATGTATC	58.520	47.619	6.13	0.00	0.00	2.24
2193	6592	2.613026	TGTCGCGGAAATGGATGTAT	57.387	45.000	6.13	0.00	0.00	2.29
2194	6593	2.276201	CTTGTCGCGGAAATGGATGTA	58.724	47.619	6.13	0.00	0.00	2.29
2195	6594	1.086696	CTTGTCGCGGAAATGGATGT	58.913	50.000	6.13	0.00	0.00	3.06
2196	6595	1.086696	ACTTGTCGCGGAAATGGATG	58.913	50.000	6.13	0.00	0.00	3.51
2197	6596	2.684001	TACTTGTCGCGGAAATGGAT	57.316	45.000	6.13	0.00	0.00	3.41
2198	6597	2.459060	TTACTTGTCGCGGAAATGGA	57.541	45.000	6.13	0.00	0.00	3.41
2199	6598	3.757745	AATTACTTGTCGCGGAAATGG	57.242	42.857	6.13	0.00	0.00	3.16
2200	6599	4.717991	TGAAATTACTTGTCGCGGAAATG	58.282	39.130	6.13	0.00	0.00	2.32
2201	6600	4.693566	TCTGAAATTACTTGTCGCGGAAAT	59.306	37.500	6.13	0.00	0.00	2.17
2202	6601	4.059511	TCTGAAATTACTTGTCGCGGAAA	58.940	39.130	6.13	0.00	0.00	3.13
2203	6602	3.655486	TCTGAAATTACTTGTCGCGGAA	58.345	40.909	6.13	0.00	0.00	4.30
2204	6603	3.306917	TCTGAAATTACTTGTCGCGGA	57.693	42.857	6.13	0.00	0.00	5.54
2205	6604	5.041287	TCTATCTGAAATTACTTGTCGCGG	58.959	41.667	6.13	0.00	0.00	6.46
2206	6605	5.174035	CCTCTATCTGAAATTACTTGTCGCG	59.826	44.000	0.00	0.00	0.00	5.87
2207	6606	5.463724	CCCTCTATCTGAAATTACTTGTCGC	59.536	44.000	0.00	0.00	0.00	5.19
2208	6607	6.806751	TCCCTCTATCTGAAATTACTTGTCG	58.193	40.000	0.00	0.00	0.00	4.35
2209	6608	7.787028	ACTCCCTCTATCTGAAATTACTTGTC	58.213	38.462	0.00	0.00	0.00	3.18
2210	6609	7.741554	ACTCCCTCTATCTGAAATTACTTGT	57.258	36.000	0.00	0.00	0.00	3.16
2269	6668	7.476540	TTACTGCTGATCCTCTGTAAACTAA	57.523	36.000	0.00	0.00	0.00	2.24
2457	9409	0.251653	AGCGAGTAGTGGGAACAGGA	60.252	55.000	0.00	0.00	44.46	3.86
2474	9426	1.518903	GGAATCCCGCTATTGGCAGC	61.519	60.000	0.00	0.00	41.91	5.25
2486	9446	1.208293	GACACCAGTCTCAGGAATCCC	59.792	57.143	0.00	0.00	41.64	3.85
2523	9483	6.126968	CGGAGGGAGTAAGTTTTAGGGATTTA	60.127	42.308	0.00	0.00	0.00	1.40
2528	9488	2.836372	ACGGAGGGAGTAAGTTTTAGGG	59.164	50.000	0.00	0.00	0.00	3.53
2545	9517	5.477291	GGATCATCTAGTATTCTGGAACGGA	59.523	44.000	0.00	0.00	45.11	4.69
2546	9518	5.243954	TGGATCATCTAGTATTCTGGAACGG	59.756	44.000	0.00	0.00	34.97	4.44
2547	9519	6.332735	TGGATCATCTAGTATTCTGGAACG	57.667	41.667	0.00	0.00	34.97	3.95
2548	9520	9.566432	AAATTGGATCATCTAGTATTCTGGAAC	57.434	33.333	0.00	0.00	34.97	3.62
2550	9522	9.565090	CAAAATTGGATCATCTAGTATTCTGGA	57.435	33.333	0.00	0.00	35.73	3.86
2551	9523	9.347240	ACAAAATTGGATCATCTAGTATTCTGG	57.653	33.333	0.00	0.00	0.00	3.86
2585	9557	8.673711	CCTCCGTTTCAAAATAGATGATACAAA	58.326	33.333	0.00	0.00	30.95	2.83
2586	9558	7.282224	CCCTCCGTTTCAAAATAGATGATACAA	59.718	37.037	0.00	0.00	30.95	2.41
2587	9559	6.765989	CCCTCCGTTTCAAAATAGATGATACA	59.234	38.462	0.00	0.00	30.95	2.29
2588	9560	6.990349	TCCCTCCGTTTCAAAATAGATGATAC	59.010	38.462	0.00	0.00	0.00	2.24
2589	9561	7.131907	TCCCTCCGTTTCAAAATAGATGATA	57.868	36.000	0.00	0.00	0.00	2.15
2590	9562	6.001449	TCCCTCCGTTTCAAAATAGATGAT	57.999	37.500	0.00	0.00	0.00	2.45
2591	9563	5.045869	ACTCCCTCCGTTTCAAAATAGATGA	60.046	40.000	0.00	0.00	0.00	2.92
2592	9564	5.186198	ACTCCCTCCGTTTCAAAATAGATG	58.814	41.667	0.00	0.00	0.00	2.90
2593	9565	5.437191	ACTCCCTCCGTTTCAAAATAGAT	57.563	39.130	0.00	0.00	0.00	1.98
2594	9566	4.903045	ACTCCCTCCGTTTCAAAATAGA	57.097	40.909	0.00	0.00	0.00	1.98
2595	9567	5.484715	TGTACTCCCTCCGTTTCAAAATAG	58.515	41.667	0.00	0.00	0.00	1.73
2596	9568	5.486735	TGTACTCCCTCCGTTTCAAAATA	57.513	39.130	0.00	0.00	0.00	1.40
2597	9569	4.360951	TGTACTCCCTCCGTTTCAAAAT	57.639	40.909	0.00	0.00	0.00	1.82
2598	9570	3.842007	TGTACTCCCTCCGTTTCAAAA	57.158	42.857	0.00	0.00	0.00	2.44
2599	9571	3.495453	CCTTGTACTCCCTCCGTTTCAAA	60.495	47.826	0.00	0.00	0.00	2.69
2600	9572	2.038033	CCTTGTACTCCCTCCGTTTCAA	59.962	50.000	0.00	0.00	0.00	2.69
2601	9573	1.621814	CCTTGTACTCCCTCCGTTTCA	59.378	52.381	0.00	0.00	0.00	2.69
2602	9574	1.066358	CCCTTGTACTCCCTCCGTTTC	60.066	57.143	0.00	0.00	0.00	2.78
2603	9575	0.981943	CCCTTGTACTCCCTCCGTTT	59.018	55.000	0.00	0.00	0.00	3.60
2604	9576	0.178912	ACCCTTGTACTCCCTCCGTT	60.179	55.000	0.00	0.00	0.00	4.44
2605	9577	0.706433	TACCCTTGTACTCCCTCCGT	59.294	55.000	0.00	0.00	0.00	4.69
2606	9578	1.400737	CTACCCTTGTACTCCCTCCG	58.599	60.000	0.00	0.00	0.00	4.63
2607	9579	1.008084	ACCTACCCTTGTACTCCCTCC	59.992	57.143	0.00	0.00	0.00	4.30
2608	9580	2.108970	CACCTACCCTTGTACTCCCTC	58.891	57.143	0.00	0.00	0.00	4.30
2609	9581	1.273666	CCACCTACCCTTGTACTCCCT	60.274	57.143	0.00	0.00	0.00	4.20
2610	9582	1.201424	CCACCTACCCTTGTACTCCC	58.799	60.000	0.00	0.00	0.00	4.30
2611	9583	1.201424	CCCACCTACCCTTGTACTCC	58.799	60.000	0.00	0.00	0.00	3.85
2612	9584	1.948391	ACCCACCTACCCTTGTACTC	58.052	55.000	0.00	0.00	0.00	2.59
2613	9585	2.428181	AACCCACCTACCCTTGTACT	57.572	50.000	0.00	0.00	0.00	2.73
2614	9586	2.372837	TGAAACCCACCTACCCTTGTAC	59.627	50.000	0.00	0.00	0.00	2.90
2629	9726	1.149148	GAAGTCTCCACGCTGAAACC	58.851	55.000	0.00	0.00	0.00	3.27
2759	10153	1.666189	GGTCAGACCATTAAAGCGAGC	59.334	52.381	15.43	0.00	38.42	5.03
2763	10157	2.436417	TGCAGGTCAGACCATTAAAGC	58.564	47.619	22.31	14.46	41.95	3.51
2852	10247	5.248477	AGAAGGTAGAACATGTACCATGTGT	59.752	40.000	16.74	4.59	42.28	3.72
2853	10248	5.582269	CAGAAGGTAGAACATGTACCATGTG	59.418	44.000	16.74	10.63	42.28	3.21
2854	10249	5.248477	ACAGAAGGTAGAACATGTACCATGT	59.752	40.000	16.74	14.32	42.28	3.21
2855	10250	5.734720	ACAGAAGGTAGAACATGTACCATG	58.265	41.667	16.74	13.82	42.28	3.66
2856	10251	7.676683	ATACAGAAGGTAGAACATGTACCAT	57.323	36.000	16.74	6.40	42.28	3.55
2857	10252	7.490657	AATACAGAAGGTAGAACATGTACCA	57.509	36.000	16.74	0.00	42.28	3.25
2858	10253	9.310716	GTTAATACAGAAGGTAGAACATGTACC	57.689	37.037	8.04	8.04	40.42	3.34
2900	10298	7.542130	CCAACCTACATCTTTATTTTGAAGTGC	59.458	37.037	0.00	0.00	0.00	4.40
2956	10354	5.391523	GCCTTTCAGTACAATGCGTATTTCA	60.392	40.000	0.00	0.00	31.20	2.69
2963	10361	2.076100	TCAGCCTTTCAGTACAATGCG	58.924	47.619	0.00	0.00	0.00	4.73
2964	10362	3.667960	CGTTCAGCCTTTCAGTACAATGC	60.668	47.826	0.00	0.00	0.00	3.56
3020	10520	5.902613	ATATGAACCAATTCCAGTGTGTG	57.097	39.130	0.00	0.00	33.49	3.82
3028	10528	6.091169	CAGTGCAACAAATATGAACCAATTCC	59.909	38.462	0.00	0.00	41.43	3.01
3199	10706	6.324601	AGGGAGTAGCTACTAACAGTTAGA	57.675	41.667	26.11	9.19	36.50	2.10
3275	10782	4.472108	ACTCCCTTCGTCCCATAATGTAAA	59.528	41.667	0.00	0.00	0.00	2.01
3286	10793	2.561858	ACAGAAAGTACTCCCTTCGTCC	59.438	50.000	0.00	0.00	0.00	4.79
3290	10797	6.051179	ACCATAACAGAAAGTACTCCCTTC	57.949	41.667	0.00	0.00	0.00	3.46
3291	10798	7.750947	ATACCATAACAGAAAGTACTCCCTT	57.249	36.000	0.00	0.00	0.00	3.95
3504	11020	5.409643	ACAGATCAACACAACGAAAAGAG	57.590	39.130	0.00	0.00	0.00	2.85
3666	11208	4.343526	TGGGTAAACGAGGTGTACAGTTTA	59.656	41.667	11.91	11.91	37.83	2.01
3693	11235	5.579384	TTTGCAATTCATTCGCTCAAAAG	57.421	34.783	0.00	0.00	0.00	2.27
3850	11395	1.410083	GCAAATGGTGGGCTCCATCTA	60.410	52.381	13.21	0.00	46.14	1.98
3925	11472	2.629909	GGTAGTTTCAGGGAGGGAGGAT	60.630	54.545	0.00	0.00	0.00	3.24
3953	11500	1.416401	GGGTTGCTCGATCCCAATCTA	59.584	52.381	9.30	0.00	40.79	1.98
3958	11505	3.407967	GGGGGTTGCTCGATCCCA	61.408	66.667	7.72	0.00	42.71	4.37
3978	11525	1.899814	TCGGGTTACAGAAGCTCACAT	59.100	47.619	0.00	0.00	33.40	3.21
4083	11630	4.947147	GCACCCACCTGGAACGCA	62.947	66.667	0.00	0.00	37.39	5.24
4251	11801	0.390340	GACAGTGATGCGCTCTGGAA	60.390	55.000	9.73	0.00	41.30	3.53
4292	11855	3.818787	GCATGCAGGCCTTCACGG	61.819	66.667	13.44	4.26	0.00	4.94
4333	11903	1.573932	CGGTTGAAGAACGCATGCA	59.426	52.632	19.57	0.00	32.28	3.96
4454	12024	2.221906	AAATCCTCCCACGTCGTCGG	62.222	60.000	2.14	2.14	41.85	4.79
4480	12050	4.484537	AGTCAATCATCTTGTCTCCCTG	57.515	45.455	0.00	0.00	0.00	4.45
4747	12320	9.881649	TGTAATGGCAATGCATTTCTTTAATAA	57.118	25.926	9.83	2.24	0.00	1.40
4749	12322	8.967664	ATGTAATGGCAATGCATTTCTTTAAT	57.032	26.923	9.83	7.64	0.00	1.40
4751	12324	9.478768	CATATGTAATGGCAATGCATTTCTTTA	57.521	29.630	9.83	10.58	0.00	1.85
4752	12325	7.442969	CCATATGTAATGGCAATGCATTTCTTT	59.557	33.333	9.83	11.48	31.75	2.52
4869	12442	6.949463	GGAGTATAGAAGCCTAGACCATACTT	59.051	42.308	0.00	0.00	37.72	2.24
4874	12447	4.168283	ACAGGAGTATAGAAGCCTAGACCA	59.832	45.833	0.00	0.00	37.72	4.02
4940	12513	4.498682	GCAAGCTGCTCGGATAATTTCATT	60.499	41.667	1.00	0.00	40.96	2.57
4941	12514	3.004106	GCAAGCTGCTCGGATAATTTCAT	59.996	43.478	1.00	0.00	40.96	2.57
4942	12515	2.355756	GCAAGCTGCTCGGATAATTTCA	59.644	45.455	1.00	0.00	40.96	2.69
4943	12516	2.355756	TGCAAGCTGCTCGGATAATTTC	59.644	45.455	1.00	0.00	45.31	2.17
4944	12517	2.368439	TGCAAGCTGCTCGGATAATTT	58.632	42.857	1.00	0.00	45.31	1.82
4945	12518	2.042686	TGCAAGCTGCTCGGATAATT	57.957	45.000	1.00	0.00	45.31	1.40
4946	12519	2.042686	TTGCAAGCTGCTCGGATAAT	57.957	45.000	1.00	0.00	45.31	1.28
4947	12520	1.819928	TTTGCAAGCTGCTCGGATAA	58.180	45.000	1.00	0.00	45.31	1.75
4948	12521	1.672363	CATTTGCAAGCTGCTCGGATA	59.328	47.619	1.00	0.00	45.31	2.59
4949	12522	0.454600	CATTTGCAAGCTGCTCGGAT	59.545	50.000	1.00	0.00	45.31	4.18
4950	12523	1.588824	CCATTTGCAAGCTGCTCGGA	61.589	55.000	1.00	0.00	45.31	4.55
4951	12524	1.153901	CCATTTGCAAGCTGCTCGG	60.154	57.895	1.00	0.00	45.31	4.63
4952	12525	0.179171	CTCCATTTGCAAGCTGCTCG	60.179	55.000	1.00	0.00	45.31	5.03
4953	12526	0.886563	ACTCCATTTGCAAGCTGCTC	59.113	50.000	1.00	0.00	45.31	4.26
4954	12527	0.886563	GACTCCATTTGCAAGCTGCT	59.113	50.000	0.00	0.00	45.31	4.24
4955	12528	0.108945	GGACTCCATTTGCAAGCTGC	60.109	55.000	0.00	0.00	45.29	5.25
4956	12529	1.201647	CAGGACTCCATTTGCAAGCTG	59.798	52.381	0.00	1.52	0.00	4.24
4957	12530	1.074405	TCAGGACTCCATTTGCAAGCT	59.926	47.619	0.00	0.00	0.00	3.74
4958	12531	1.538047	TCAGGACTCCATTTGCAAGC	58.462	50.000	0.00	0.00	0.00	4.01
4959	12532	3.152341	AGTTCAGGACTCCATTTGCAAG	58.848	45.455	0.00	0.00	31.20	4.01
4960	12533	3.228188	AGTTCAGGACTCCATTTGCAA	57.772	42.857	0.00	0.00	31.20	4.08
4961	12534	2.957402	AGTTCAGGACTCCATTTGCA	57.043	45.000	0.00	0.00	31.20	4.08
4962	12535	2.680339	GCTAGTTCAGGACTCCATTTGC	59.320	50.000	0.00	0.00	39.86	3.68
4963	12536	3.274288	GGCTAGTTCAGGACTCCATTTG	58.726	50.000	0.00	0.00	39.86	2.32
4964	12537	2.093447	CGGCTAGTTCAGGACTCCATTT	60.093	50.000	0.00	0.00	39.86	2.32
4965	12538	1.482593	CGGCTAGTTCAGGACTCCATT	59.517	52.381	0.00	0.00	39.86	3.16
4966	12539	1.115467	CGGCTAGTTCAGGACTCCAT	58.885	55.000	0.00	0.00	39.86	3.41
4967	12540	1.605058	GCGGCTAGTTCAGGACTCCA	61.605	60.000	0.00	0.00	39.86	3.86
4968	12541	1.142097	GCGGCTAGTTCAGGACTCC	59.858	63.158	0.00	0.00	39.86	3.85
4969	12542	0.179124	CTGCGGCTAGTTCAGGACTC	60.179	60.000	0.00	0.00	39.86	3.36
4970	12543	1.893786	CTGCGGCTAGTTCAGGACT	59.106	57.895	0.00	0.00	42.55	3.85
4971	12544	1.811679	GCTGCGGCTAGTTCAGGAC	60.812	63.158	11.21	0.00	35.22	3.85
4972	12545	2.579201	GCTGCGGCTAGTTCAGGA	59.421	61.111	11.21	0.00	35.22	3.86
4982	12555	0.097674	CATACTTCACAAGCTGCGGC	59.902	55.000	10.33	10.33	39.06	6.53
4983	12556	0.729116	CCATACTTCACAAGCTGCGG	59.271	55.000	0.00	0.00	0.00	5.69
4984	12557	1.725641	TCCATACTTCACAAGCTGCG	58.274	50.000	0.00	0.00	0.00	5.18
4985	12558	2.421424	CCTTCCATACTTCACAAGCTGC	59.579	50.000	0.00	0.00	0.00	5.25
4986	12559	2.421424	GCCTTCCATACTTCACAAGCTG	59.579	50.000	0.00	0.00	0.00	4.24
4987	12560	2.716217	GCCTTCCATACTTCACAAGCT	58.284	47.619	0.00	0.00	0.00	3.74
4988	12561	1.398390	CGCCTTCCATACTTCACAAGC	59.602	52.381	0.00	0.00	0.00	4.01
4989	12562	2.972625	TCGCCTTCCATACTTCACAAG	58.027	47.619	0.00	0.00	0.00	3.16
4990	12563	3.055458	TGATCGCCTTCCATACTTCACAA	60.055	43.478	0.00	0.00	0.00	3.33
4991	12564	2.499693	TGATCGCCTTCCATACTTCACA	59.500	45.455	0.00	0.00	0.00	3.58
4992	12565	3.179443	TGATCGCCTTCCATACTTCAC	57.821	47.619	0.00	0.00	0.00	3.18
4993	12566	3.904800	TTGATCGCCTTCCATACTTCA	57.095	42.857	0.00	0.00	0.00	3.02
4994	12567	5.559035	CGAATTTGATCGCCTTCCATACTTC	60.559	44.000	0.00	0.00	35.85	3.01
4995	12568	4.273480	CGAATTTGATCGCCTTCCATACTT	59.727	41.667	0.00	0.00	35.85	2.24
4996	12569	3.809832	CGAATTTGATCGCCTTCCATACT	59.190	43.478	0.00	0.00	35.85	2.12
4997	12570	3.807622	TCGAATTTGATCGCCTTCCATAC	59.192	43.478	0.00	0.00	42.44	2.39
4998	12571	4.058124	CTCGAATTTGATCGCCTTCCATA	58.942	43.478	0.00	0.00	42.44	2.74
4999	12572	2.874701	CTCGAATTTGATCGCCTTCCAT	59.125	45.455	0.00	0.00	42.44	3.41
5000	12573	2.279741	CTCGAATTTGATCGCCTTCCA	58.720	47.619	0.00	0.00	42.44	3.53
5001	12574	2.280628	ACTCGAATTTGATCGCCTTCC	58.719	47.619	0.00	0.00	42.44	3.46
5002	12575	3.542291	CGAACTCGAATTTGATCGCCTTC	60.542	47.826	5.90	0.00	42.44	3.46
5003	12576	2.348666	CGAACTCGAATTTGATCGCCTT	59.651	45.455	5.90	0.00	42.44	4.35
5004	12577	1.927174	CGAACTCGAATTTGATCGCCT	59.073	47.619	5.90	0.00	42.44	5.52
5005	12578	1.924524	TCGAACTCGAATTTGATCGCC	59.075	47.619	12.09	0.00	46.30	5.54
5017	12590	1.070041	GTATCTACCGGCTCGAACTCG	60.070	57.143	0.00	0.00	41.45	4.18
5018	12591	2.220313	AGTATCTACCGGCTCGAACTC	58.780	52.381	0.00	0.00	0.00	3.01
5019	12592	2.345124	AGTATCTACCGGCTCGAACT	57.655	50.000	0.00	0.00	0.00	3.01
5020	12593	4.214971	TCAATAGTATCTACCGGCTCGAAC	59.785	45.833	0.00	0.00	0.00	3.95
5021	12594	4.392047	TCAATAGTATCTACCGGCTCGAA	58.608	43.478	0.00	0.00	0.00	3.71
5022	12595	4.011966	TCAATAGTATCTACCGGCTCGA	57.988	45.455	0.00	0.00	0.00	4.04
5023	12596	4.966965	ATCAATAGTATCTACCGGCTCG	57.033	45.455	0.00	0.00	0.00	5.03
5024	12597	7.393841	ACTTATCAATAGTATCTACCGGCTC	57.606	40.000	0.00	0.00	0.00	4.70
5025	12598	8.327271	TCTACTTATCAATAGTATCTACCGGCT	58.673	37.037	0.00	0.00	0.00	5.52
5026	12599	8.503458	TCTACTTATCAATAGTATCTACCGGC	57.497	38.462	0.00	0.00	0.00	6.13
5086	12659	6.721208	TGAGATGAATGTAGGGCTTTCTTTTT	59.279	34.615	0.00	0.00	33.79	1.94
5087	12660	6.248433	TGAGATGAATGTAGGGCTTTCTTTT	58.752	36.000	0.00	0.00	33.79	2.27
5088	12661	5.819991	TGAGATGAATGTAGGGCTTTCTTT	58.180	37.500	0.00	0.00	33.79	2.52
5089	12662	5.441718	TGAGATGAATGTAGGGCTTTCTT	57.558	39.130	0.00	0.00	33.79	2.52
5090	12663	5.131642	TGATGAGATGAATGTAGGGCTTTCT	59.868	40.000	0.00	0.00	33.79	2.52
5091	12664	5.238214	GTGATGAGATGAATGTAGGGCTTTC	59.762	44.000	0.00	0.00	33.39	2.62
5092	12665	5.104193	AGTGATGAGATGAATGTAGGGCTTT	60.104	40.000	0.00	0.00	0.00	3.51
5093	12666	4.411540	AGTGATGAGATGAATGTAGGGCTT	59.588	41.667	0.00	0.00	0.00	4.35
5094	12667	3.972638	AGTGATGAGATGAATGTAGGGCT	59.027	43.478	0.00	0.00	0.00	5.19
5228	12806	1.404181	GCACATAGTTGGAGAGCGACA	60.404	52.381	0.00	0.00	0.00	4.35
5231	12809	1.134995	TGAGCACATAGTTGGAGAGCG	60.135	52.381	0.00	0.00	0.00	5.03
5245	12823	9.760077	TTTACTTAGGCTTAAGTATATGAGCAC	57.240	33.333	24.18	0.00	46.43	4.40
5529	13278	2.972713	GGCTACTATCATGTTCCTCCCA	59.027	50.000	0.00	0.00	0.00	4.37
5617	13369	4.046286	AGGCATGATTACAACTGGGAAA	57.954	40.909	0.00	0.00	0.00	3.13
5635	13387	2.169978	ACCCGGAGTTCTACAATTAGGC	59.830	50.000	0.73	0.00	0.00	3.93
5672	13424	3.343788	GAGGTCAGGAGGTGCGTCG	62.344	68.421	0.00	0.00	0.00	5.12
5743	13495	2.662596	CTACGTCCCAAGCAGGCA	59.337	61.111	0.00	0.00	35.39	4.75
5794	13704	5.258456	TGATTTACTAGCTACGTCCAAGG	57.742	43.478	0.00	0.00	0.00	3.61
5968	13908	5.181748	GGTCCTGGATAGATGATGTATTGC	58.818	45.833	0.00	0.00	0.00	3.56
6148	14595	3.461773	CGCGGAGGTGGTGGATCT	61.462	66.667	0.00	0.00	0.00	2.75
6163	14610	0.536006	CTCCCCTCCATTGGATTCGC	60.536	60.000	5.70	0.00	0.00	4.70
6173	14620	2.003830	TCTCTCTTTCTCTCCCCTCCA	58.996	52.381	0.00	0.00	0.00	3.86
6178	14625	3.169908	ACTGGTTCTCTCTTTCTCTCCC	58.830	50.000	0.00	0.00	0.00	4.30
6219	14666	0.674895	GCAGAAGCACAGTTCGGGAT	60.675	55.000	0.00	0.00	41.58	3.85
6283	14730	2.269241	CAAAGGACCTCGAGGCCC	59.731	66.667	31.56	29.85	38.11	5.80
6769	15216	4.168291	CTGCCGCTCCCTCCTTCC	62.168	72.222	0.00	0.00	0.00	3.46
6770	15217	4.168291	CCTGCCGCTCCCTCCTTC	62.168	72.222	0.00	0.00	0.00	3.46
6784	15231	1.521010	CCATCTCGAGCACAGCCTG	60.521	63.158	7.81	0.00	0.00	4.85
6785	15232	2.729479	CCCATCTCGAGCACAGCCT	61.729	63.158	7.81	0.00	0.00	4.58
6786	15233	2.037620	ATCCCATCTCGAGCACAGCC	62.038	60.000	7.81	0.00	0.00	4.85
6787	15234	0.599728	GATCCCATCTCGAGCACAGC	60.600	60.000	7.81	0.00	0.00	4.40
6788	15235	0.318529	CGATCCCATCTCGAGCACAG	60.319	60.000	7.81	0.00	38.38	3.66
6789	15236	0.751643	TCGATCCCATCTCGAGCACA	60.752	55.000	7.81	0.00	40.01	4.57
6790	15237	2.033793	TCGATCCCATCTCGAGCAC	58.966	57.895	7.81	0.00	40.01	4.40
6791	15238	4.579127	TCGATCCCATCTCGAGCA	57.421	55.556	7.81	0.00	40.01	4.26
6794	15241	1.610363	CTTCCTCGATCCCATCTCGA	58.390	55.000	0.00	0.00	42.44	4.04
6795	15242	0.038709	GCTTCCTCGATCCCATCTCG	60.039	60.000	0.00	0.00	37.47	4.04
6796	15243	1.000731	CAGCTTCCTCGATCCCATCTC	59.999	57.143	0.00	0.00	0.00	2.75
6797	15244	1.047002	CAGCTTCCTCGATCCCATCT	58.953	55.000	0.00	0.00	0.00	2.90
6798	15245	0.034616	CCAGCTTCCTCGATCCCATC	59.965	60.000	0.00	0.00	0.00	3.51
6799	15246	1.414061	CCCAGCTTCCTCGATCCCAT	61.414	60.000	0.00	0.00	0.00	4.00
6800	15247	2.066393	CCCAGCTTCCTCGATCCCA	61.066	63.158	0.00	0.00	0.00	4.37
6801	15248	1.124477	ATCCCAGCTTCCTCGATCCC	61.124	60.000	0.00	0.00	0.00	3.85
6802	15249	0.761802	AATCCCAGCTTCCTCGATCC	59.238	55.000	0.00	0.00	0.00	3.36
6803	15250	2.629336	AAATCCCAGCTTCCTCGATC	57.371	50.000	0.00	0.00	0.00	3.69
6804	15251	3.372440	AAAAATCCCAGCTTCCTCGAT	57.628	42.857	0.00	0.00	0.00	3.59
6805	15252	2.879103	AAAAATCCCAGCTTCCTCGA	57.121	45.000	0.00	0.00	0.00	4.04
6824	15271	5.938125	CGGTATGGAGGAGAGAAAAGAAAAA	59.062	40.000	0.00	0.00	0.00	1.94
6825	15272	5.488341	CGGTATGGAGGAGAGAAAAGAAAA	58.512	41.667	0.00	0.00	0.00	2.29
6826	15273	4.081087	CCGGTATGGAGGAGAGAAAAGAAA	60.081	45.833	0.00	0.00	42.00	2.52
6827	15274	3.451178	CCGGTATGGAGGAGAGAAAAGAA	59.549	47.826	0.00	0.00	42.00	2.52
6828	15275	3.031736	CCGGTATGGAGGAGAGAAAAGA	58.968	50.000	0.00	0.00	42.00	2.52
6829	15276	2.766828	ACCGGTATGGAGGAGAGAAAAG	59.233	50.000	4.49	0.00	42.00	2.27
6830	15277	2.829023	ACCGGTATGGAGGAGAGAAAA	58.171	47.619	4.49	0.00	42.00	2.29
6831	15278	2.544844	ACCGGTATGGAGGAGAGAAA	57.455	50.000	4.49	0.00	42.00	2.52
6832	15279	2.500098	CAAACCGGTATGGAGGAGAGAA	59.500	50.000	8.00	0.00	42.00	2.87
6833	15280	2.108168	CAAACCGGTATGGAGGAGAGA	58.892	52.381	8.00	0.00	42.00	3.10
6834	15281	1.139058	CCAAACCGGTATGGAGGAGAG	59.861	57.143	8.00	0.00	42.00	3.20
6835	15282	1.200519	CCAAACCGGTATGGAGGAGA	58.799	55.000	8.00	0.00	42.00	3.71
6836	15283	0.180406	CCCAAACCGGTATGGAGGAG	59.820	60.000	8.00	0.00	42.00	3.69
6837	15284	1.917336	GCCCAAACCGGTATGGAGGA	61.917	60.000	8.00	0.00	42.00	3.71
6838	15285	1.453197	GCCCAAACCGGTATGGAGG	60.453	63.158	8.00	6.08	42.00	4.30
6839	15286	0.748005	CAGCCCAAACCGGTATGGAG	60.748	60.000	8.00	1.56	42.00	3.86
6840	15287	1.202099	TCAGCCCAAACCGGTATGGA	61.202	55.000	8.00	0.00	42.00	3.41
6841	15288	1.029947	GTCAGCCCAAACCGGTATGG	61.030	60.000	8.00	10.32	46.41	2.74
6842	15289	0.035439	AGTCAGCCCAAACCGGTATG	60.035	55.000	8.00	0.00	0.00	2.39
6843	15290	0.696501	AAGTCAGCCCAAACCGGTAT	59.303	50.000	8.00	0.00	0.00	2.73
6844	15291	1.350071	TAAGTCAGCCCAAACCGGTA	58.650	50.000	8.00	0.00	0.00	4.02
6845	15292	0.696501	ATAAGTCAGCCCAAACCGGT	59.303	50.000	0.00	0.00	0.00	5.28
6846	15293	1.094785	CATAAGTCAGCCCAAACCGG	58.905	55.000	0.00	0.00	0.00	5.28
6847	15294	0.451783	GCATAAGTCAGCCCAAACCG	59.548	55.000	0.00	0.00	0.00	4.44
6848	15295	0.817654	GGCATAAGTCAGCCCAAACC	59.182	55.000	0.00	0.00	45.18	3.27
6855	15302	0.461961	AGTCCTCGGCATAAGTCAGC	59.538	55.000	0.00	0.00	0.00	4.26
6856	15303	2.294791	CCTAGTCCTCGGCATAAGTCAG	59.705	54.545	0.00	0.00	0.00	3.51
6857	15304	2.307768	CCTAGTCCTCGGCATAAGTCA	58.692	52.381	0.00	0.00	0.00	3.41
6858	15305	1.614413	CCCTAGTCCTCGGCATAAGTC	59.386	57.143	0.00	0.00	0.00	3.01
6859	15306	1.705873	CCCTAGTCCTCGGCATAAGT	58.294	55.000	0.00	0.00	0.00	2.24
6860	15307	0.318762	GCCCTAGTCCTCGGCATAAG	59.681	60.000	2.40	0.00	42.52	1.73
6861	15308	0.105658	AGCCCTAGTCCTCGGCATAA	60.106	55.000	9.30	0.00	45.56	1.90
6862	15309	0.827925	CAGCCCTAGTCCTCGGCATA	60.828	60.000	9.30	0.00	45.56	3.14
6863	15310	2.136878	CAGCCCTAGTCCTCGGCAT	61.137	63.158	9.30	0.00	45.56	4.40
6864	15311	2.759973	CAGCCCTAGTCCTCGGCA	60.760	66.667	9.30	0.00	45.56	5.69
6865	15312	1.403687	ATTCAGCCCTAGTCCTCGGC	61.404	60.000	0.00	0.00	43.35	5.54
6866	15313	1.889829	CTATTCAGCCCTAGTCCTCGG	59.110	57.143	0.00	0.00	0.00	4.63
6867	15314	1.271102	GCTATTCAGCCCTAGTCCTCG	59.729	57.143	0.00	0.00	42.37	4.63
6879	15326	5.088739	GTCCGTGATGTTTTTGCTATTCAG	58.911	41.667	0.00	0.00	0.00	3.02
6880	15327	4.759693	AGTCCGTGATGTTTTTGCTATTCA	59.240	37.500	0.00	0.00	0.00	2.57
6881	15328	5.296813	AGTCCGTGATGTTTTTGCTATTC	57.703	39.130	0.00	0.00	0.00	1.75
6882	15329	5.705609	AAGTCCGTGATGTTTTTGCTATT	57.294	34.783	0.00	0.00	0.00	1.73
6883	15330	5.705609	AAAGTCCGTGATGTTTTTGCTAT	57.294	34.783	0.00	0.00	0.00	2.97
6884	15331	5.508200	AAAAGTCCGTGATGTTTTTGCTA	57.492	34.783	0.00	0.00	0.00	3.49
6885	15332	4.385358	AAAAGTCCGTGATGTTTTTGCT	57.615	36.364	0.00	0.00	0.00	3.91
6905	15352	4.150098	ACGTTGTTAGCGTTTTTGCAAAAA	59.850	33.333	28.85	28.85	39.79	1.94
6906	15353	3.673809	ACGTTGTTAGCGTTTTTGCAAAA	59.326	34.783	20.46	20.46	39.79	2.44
6907	15354	3.243336	ACGTTGTTAGCGTTTTTGCAAA	58.757	36.364	8.05	8.05	39.79	3.68
6908	15355	2.864968	ACGTTGTTAGCGTTTTTGCAA	58.135	38.095	0.00	0.00	39.79	4.08
6909	15356	2.546195	ACGTTGTTAGCGTTTTTGCA	57.454	40.000	0.00	0.00	39.79	4.08
6910	15357	2.394898	CGTACGTTGTTAGCGTTTTTGC	59.605	45.455	7.22	0.00	42.85	3.68
6911	15358	3.649983	GTCGTACGTTGTTAGCGTTTTTG	59.350	43.478	16.05	0.00	42.85	2.44
6912	15359	3.302415	GGTCGTACGTTGTTAGCGTTTTT	60.302	43.478	16.05	0.00	42.85	1.94
6913	15360	2.218530	GGTCGTACGTTGTTAGCGTTTT	59.781	45.455	16.05	0.00	42.85	2.43
6914	15361	1.786579	GGTCGTACGTTGTTAGCGTTT	59.213	47.619	16.05	0.00	42.85	3.60
6915	15362	1.268999	TGGTCGTACGTTGTTAGCGTT	60.269	47.619	16.05	0.00	42.85	4.84
6916	15363	0.310543	TGGTCGTACGTTGTTAGCGT	59.689	50.000	16.05	0.00	45.11	5.07
6917	15364	0.979811	CTGGTCGTACGTTGTTAGCG	59.020	55.000	16.05	0.00	0.00	4.26
6918	15365	2.336554	TCTGGTCGTACGTTGTTAGC	57.663	50.000	16.05	5.65	0.00	3.09
6919	15366	3.426525	GGTTTCTGGTCGTACGTTGTTAG	59.573	47.826	16.05	8.07	0.00	2.34
6920	15367	3.181482	TGGTTTCTGGTCGTACGTTGTTA	60.181	43.478	16.05	0.00	0.00	2.41
6921	15368	2.204237	GGTTTCTGGTCGTACGTTGTT	58.796	47.619	16.05	0.00	0.00	2.83
6922	15369	1.136695	TGGTTTCTGGTCGTACGTTGT	59.863	47.619	16.05	0.00	0.00	3.32
6923	15370	1.855513	TGGTTTCTGGTCGTACGTTG	58.144	50.000	16.05	4.38	0.00	4.10
6924	15371	2.600470	TTGGTTTCTGGTCGTACGTT	57.400	45.000	16.05	0.00	0.00	3.99
6925	15372	2.600470	TTTGGTTTCTGGTCGTACGT	57.400	45.000	16.05	0.00	0.00	3.57
6926	15373	4.477302	AAATTTGGTTTCTGGTCGTACG	57.523	40.909	9.53	9.53	0.00	3.67
6927	15374	6.068473	AGAAAATTTGGTTTCTGGTCGTAC	57.932	37.500	0.00	0.00	44.35	3.67
6928	15375	6.702716	AAGAAAATTTGGTTTCTGGTCGTA	57.297	33.333	1.19	0.00	45.09	3.43
6929	15376	5.592104	AAGAAAATTTGGTTTCTGGTCGT	57.408	34.783	1.19	0.00	45.09	4.34
6930	15377	7.200455	AGTAAAGAAAATTTGGTTTCTGGTCG	58.800	34.615	1.19	0.00	45.09	4.79
7012	15459	8.316640	ACAACAACAACAACAACAACAATAAT	57.683	26.923	0.00	0.00	0.00	1.28
7015	15462	6.037610	ACAACAACAACAACAACAACAACAAT	59.962	30.769	0.00	0.00	0.00	2.71
7073	15520	7.441890	TGCGGAATTGTCTAGATTTACAAAA	57.558	32.000	0.00	0.00	38.95	2.44
7113	15561	2.536365	TGACGTGGCATAACGATCTTC	58.464	47.619	12.04	1.24	46.49	2.87
7114	15562	2.665649	TGACGTGGCATAACGATCTT	57.334	45.000	12.04	0.00	46.49	2.40
7238	15689	5.646606	TGCAGAAAACACCAGTTTAAGAAC	58.353	37.500	0.00	0.00	46.79	3.01
7265	15716	4.497291	AAACCACCACACTGAAGTCTAA	57.503	40.909	0.00	0.00	0.00	2.10
7275	15726	2.888834	ATTGCAGAAAACCACCACAC	57.111	45.000	0.00	0.00	0.00	3.82
7309	15760	0.454196	GGGCGTTCTGTCTCTCTCTC	59.546	60.000	0.00	0.00	0.00	3.20
7413	15864	7.907389	TGAGGTGAAGTCAGATTAGTTTGTAT	58.093	34.615	0.00	0.00	0.00	2.29
7422	15873	5.752036	TCAGATTGAGGTGAAGTCAGATT	57.248	39.130	0.00	0.00	0.00	2.40
7548	15999	1.978580	TGGTCCAAGAAGAGAGTTCCC	59.021	52.381	0.00	0.00	0.00	3.97
7608	16059	1.626356	GGCATCCACCCTACAGCAGA	61.626	60.000	0.00	0.00	0.00	4.26
7654	16105	3.951775	AACGATGAGAAGAAGAGCAGT	57.048	42.857	0.00	0.00	0.00	4.40
7701	16152	5.738619	ACCACATGACTTGATACTGTGTA	57.261	39.130	0.00	0.00	36.37	2.90
7724	16175	6.127479	ACCTCAACATGCAGTTCTAACAAAAA	60.127	34.615	0.00	0.00	38.74	1.94
7747	16198	1.269448	ACGGTCACATGCAAATGAACC	59.731	47.619	11.80	8.96	0.00	3.62
7827	16278	9.868277	GAACAACATAACCAATTGAAATCCATA	57.132	29.630	7.12	0.00	0.00	2.74
8047	16498	5.647658	ACAATGAGCAGAACGAAATATCCAA	59.352	36.000	0.00	0.00	0.00	3.53
8102	16553	0.593128	GCATTTCAGTTGTGAGCGGT	59.407	50.000	0.00	0.00	32.98	5.68
8137	16588	2.428171	GCTTATGAAAATCAGCCCAGCA	59.572	45.455	0.00	0.00	0.00	4.41
8202	16653	4.023707	GGCATACTGTTAGCAATCCATGAC	60.024	45.833	0.00	0.00	0.00	3.06
8339	16790	6.926826	TGATTTCATAGCATCATCAATTTGGC	59.073	34.615	0.00	0.00	0.00	4.52
8528	16979	4.578928	TGAATTCACCATCAGCATCATCAG	59.421	41.667	3.38	0.00	0.00	2.90
8745	17197	5.528043	TGCAAAAATGTAACAGGTGACAT	57.472	34.783	0.00	0.00	37.91	3.06
9113	17574	9.625747	TCTATTGTTGCACAGATATTCCAAATA	57.374	29.630	0.00	0.00	0.00	1.40
9135	17598	5.981088	TGTGCAACATCAACCATTTCTAT	57.019	34.783	0.00	0.00	45.67	1.98
9189	17686	0.407139	AAGAGGCAGGGCAAATCAGT	59.593	50.000	0.00	0.00	0.00	3.41
9190	17687	0.815734	CAAGAGGCAGGGCAAATCAG	59.184	55.000	0.00	0.00	0.00	2.90
9214	17711	4.383770	CCAAAAACGCCCTCCTATTCTAGA	60.384	45.833	0.00	0.00	0.00	2.43
9216	17713	3.520317	TCCAAAAACGCCCTCCTATTCTA	59.480	43.478	0.00	0.00	0.00	2.10
9225	17722	0.318120	CAAGCATCCAAAAACGCCCT	59.682	50.000	0.00	0.00	0.00	5.19
9274	17771	5.730568	GCGTTAGGCAGGAATTCAACTATTG	60.731	44.000	7.93	0.00	42.87	1.90
9380	17877	5.937540	ACGATATGAGAAAATGAACCACACA	59.062	36.000	0.00	0.00	0.00	3.72
9382	17879	6.169800	TCACGATATGAGAAAATGAACCACA	58.830	36.000	0.00	0.00	31.91	4.17
9500	18018	7.547697	TCCTTTATGGTCGGTCATATGATAA	57.452	36.000	9.02	0.00	37.07	1.75
9511	18029	3.740115	CCTGGTTATCCTTTATGGTCGG	58.260	50.000	0.00	0.00	37.07	4.79

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.