Multiple sequence alignment - TraesCS2B01G084500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G084500 chr2B 100.000 3089 0 0 1 3089 47230030 47233118 0.000000e+00 5705
1 TraesCS2B01G084500 chr2B 93.473 1195 55 10 906 2086 47250257 47249072 0.000000e+00 1753
2 TraesCS2B01G084500 chr2B 90.000 210 20 1 278 487 47250787 47250579 1.410000e-68 270
3 TraesCS2B01G084500 chr2B 93.678 174 10 1 496 668 797534649 797534822 3.060000e-65 259
4 TraesCS2B01G084500 chr2B 92.265 181 13 1 492 672 485894148 485894327 3.950000e-64 255
5 TraesCS2B01G084500 chr2B 89.286 140 11 2 2490 2629 627329066 627328931 4.100000e-39 172
6 TraesCS2B01G084500 chr2D 89.200 1213 75 26 778 1966 29284948 29286128 0.000000e+00 1463
7 TraesCS2B01G084500 chr2D 93.750 176 10 1 491 666 402716726 402716900 2.360000e-66 263
8 TraesCS2B01G084500 chr7B 89.723 1012 71 17 2105 3089 456651836 456650831 0.000000e+00 1262
9 TraesCS2B01G084500 chr7B 89.339 1013 74 17 2105 3089 535426336 535425330 0.000000e+00 1242
10 TraesCS2B01G084500 chr7B 75.520 625 126 19 1051 1666 516464287 516464893 6.520000e-72 281
11 TraesCS2B01G084500 chr2A 90.241 912 57 19 789 1680 31597402 31598301 0.000000e+00 1162
12 TraesCS2B01G084500 chr2A 85.948 733 97 6 933 1664 29933833 29934560 0.000000e+00 778
13 TraesCS2B01G084500 chr2A 85.948 733 97 6 933 1664 29956517 29955790 0.000000e+00 778
14 TraesCS2B01G084500 chr2A 87.091 581 62 9 2509 3081 713698407 713697832 0.000000e+00 645
15 TraesCS2B01G084500 chr2A 86.730 422 38 11 2105 2519 156053580 156053170 1.310000e-123 453
16 TraesCS2B01G084500 chr2A 97.238 181 5 0 1792 1972 31598402 31598582 1.080000e-79 307
17 TraesCS2B01G084500 chr3B 85.134 1009 95 26 2104 3089 766055690 766054714 0.000000e+00 981
18 TraesCS2B01G084500 chr3B 90.630 619 40 8 2105 2706 563358975 563358358 0.000000e+00 806
19 TraesCS2B01G084500 chr3B 90.397 604 51 5 2490 3089 70112889 70112289 0.000000e+00 787
20 TraesCS2B01G084500 chr3B 88.599 421 36 5 2108 2519 77617250 77617667 4.600000e-138 501
21 TraesCS2B01G084500 chr3B 91.250 80 0 2 2447 2519 452614974 452615053 5.450000e-18 102
22 TraesCS2B01G084500 chr7A 81.800 1011 117 34 2108 3089 185564197 185563225 0.000000e+00 785
23 TraesCS2B01G084500 chr7A 87.696 447 29 7 2108 2541 633052543 633052110 5.950000e-137 497
24 TraesCS2B01G084500 chr7A 75.938 640 122 23 1040 1666 555650284 555650904 1.800000e-77 300
25 TraesCS2B01G084500 chr7A 75.478 628 121 25 1051 1666 513415290 513414684 3.030000e-70 276
26 TraesCS2B01G084500 chr5D 83.740 861 97 27 2246 3082 486267754 486268595 0.000000e+00 774
27 TraesCS2B01G084500 chr5D 94.152 171 10 0 498 668 498722073 498721903 8.500000e-66 261
28 TraesCS2B01G084500 chr5D 93.605 172 10 1 502 672 317793128 317792957 3.950000e-64 255
29 TraesCS2B01G084500 chr5D 91.713 181 15 0 502 682 431780588 431780408 5.110000e-63 252
30 TraesCS2B01G084500 chr1D 86.882 587 66 9 2509 3089 208697217 208696636 0.000000e+00 647
31 TraesCS2B01G084500 chr1D 91.534 189 12 4 501 687 126223505 126223319 1.100000e-64 257
32 TraesCS2B01G084500 chr1D 94.012 167 10 0 501 667 160451658 160451492 1.420000e-63 254
33 TraesCS2B01G084500 chr1D 93.023 172 11 1 502 672 27020430 27020259 1.840000e-62 250
34 TraesCS2B01G084500 chr5B 86.224 588 72 6 2509 3089 288923734 288923149 2.020000e-176 628
35 TraesCS2B01G084500 chr5B 85.412 425 44 10 2105 2519 667101193 667101609 2.850000e-115 425
36 TraesCS2B01G084500 chr5B 92.655 177 11 2 490 664 105528185 105528009 1.420000e-63 254
37 TraesCS2B01G084500 chr4A 88.821 492 53 2 2599 3089 529904563 529904073 1.230000e-168 603
38 TraesCS2B01G084500 chr4A 86.824 425 37 11 2104 2519 649909638 649910052 1.010000e-124 457
39 TraesCS2B01G084500 chr7D 91.038 424 24 6 2105 2519 529809097 529808679 7.480000e-156 560
40 TraesCS2B01G084500 chr7D 86.713 429 40 7 2105 2519 69352877 69352452 7.800000e-126 460
41 TraesCS2B01G084500 chr7D 75.862 638 123 22 1040 1666 487739148 487739765 2.330000e-76 296
42 TraesCS2B01G084500 chr7D 95.706 163 6 1 502 664 171308151 171307990 8.500000e-66 261
43 TraesCS2B01G084500 chr7D 93.605 172 10 1 502 672 24559345 24559174 3.950000e-64 255
44 TraesCS2B01G084500 chr7D 92.697 178 12 1 496 672 549159460 549159637 3.950000e-64 255
45 TraesCS2B01G084500 chr6B 88.630 343 29 7 2105 2446 79527016 79526683 2.870000e-110 409
46 TraesCS2B01G084500 chr6D 92.222 180 13 1 494 672 70040753 70040932 1.420000e-63 254
47 TraesCS2B01G084500 chr4D 92.135 178 13 1 496 672 38630525 38630702 1.840000e-62 250
48 TraesCS2B01G084500 chr4D 93.023 172 11 1 502 672 55675725 55675554 1.840000e-62 250
49 TraesCS2B01G084500 chr4D 92.135 178 12 2 496 672 117267191 117267367 1.840000e-62 250
50 TraesCS2B01G084500 chr4D 92.179 179 11 3 496 672 133303582 133303759 1.840000e-62 250
51 TraesCS2B01G084500 chr4D 92.135 178 13 1 496 672 348484014 348484191 1.840000e-62 250
52 TraesCS2B01G084500 chr4D 92.135 178 13 1 496 672 361459833 361460010 1.840000e-62 250
53 TraesCS2B01G084500 chr4D 92.135 178 13 1 496 672 371709345 371709522 1.840000e-62 250
54 TraesCS2B01G084500 chr4D 93.452 168 11 0 497 664 468208811 468208644 1.840000e-62 250
55 TraesCS2B01G084500 chr4D 92.941 170 11 1 504 672 41372505 41372674 2.380000e-61 246
56 TraesCS2B01G084500 chr4D 91.620 179 12 3 496 672 28152997 28153174 8.560000e-61 244
57 TraesCS2B01G084500 chr4D 91.573 178 14 1 496 672 66835188 66835365 8.560000e-61 244


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G084500 chr2B 47230030 47233118 3088 False 5705.0 5705 100.0000 1 3089 1 chr2B.!!$F1 3088
1 TraesCS2B01G084500 chr2B 47249072 47250787 1715 True 1011.5 1753 91.7365 278 2086 2 chr2B.!!$R2 1808
2 TraesCS2B01G084500 chr2D 29284948 29286128 1180 False 1463.0 1463 89.2000 778 1966 1 chr2D.!!$F1 1188
3 TraesCS2B01G084500 chr7B 456650831 456651836 1005 True 1262.0 1262 89.7230 2105 3089 1 chr7B.!!$R1 984
4 TraesCS2B01G084500 chr7B 535425330 535426336 1006 True 1242.0 1242 89.3390 2105 3089 1 chr7B.!!$R2 984
5 TraesCS2B01G084500 chr7B 516464287 516464893 606 False 281.0 281 75.5200 1051 1666 1 chr7B.!!$F1 615
6 TraesCS2B01G084500 chr2A 29933833 29934560 727 False 778.0 778 85.9480 933 1664 1 chr2A.!!$F1 731
7 TraesCS2B01G084500 chr2A 29955790 29956517 727 True 778.0 778 85.9480 933 1664 1 chr2A.!!$R1 731
8 TraesCS2B01G084500 chr2A 31597402 31598582 1180 False 734.5 1162 93.7395 789 1972 2 chr2A.!!$F2 1183
9 TraesCS2B01G084500 chr2A 713697832 713698407 575 True 645.0 645 87.0910 2509 3081 1 chr2A.!!$R3 572
10 TraesCS2B01G084500 chr3B 766054714 766055690 976 True 981.0 981 85.1340 2104 3089 1 chr3B.!!$R3 985
11 TraesCS2B01G084500 chr3B 563358358 563358975 617 True 806.0 806 90.6300 2105 2706 1 chr3B.!!$R2 601
12 TraesCS2B01G084500 chr3B 70112289 70112889 600 True 787.0 787 90.3970 2490 3089 1 chr3B.!!$R1 599
13 TraesCS2B01G084500 chr7A 185563225 185564197 972 True 785.0 785 81.8000 2108 3089 1 chr7A.!!$R1 981
14 TraesCS2B01G084500 chr7A 555650284 555650904 620 False 300.0 300 75.9380 1040 1666 1 chr7A.!!$F1 626
15 TraesCS2B01G084500 chr7A 513414684 513415290 606 True 276.0 276 75.4780 1051 1666 1 chr7A.!!$R2 615
16 TraesCS2B01G084500 chr5D 486267754 486268595 841 False 774.0 774 83.7400 2246 3082 1 chr5D.!!$F1 836
17 TraesCS2B01G084500 chr1D 208696636 208697217 581 True 647.0 647 86.8820 2509 3089 1 chr1D.!!$R4 580
18 TraesCS2B01G084500 chr5B 288923149 288923734 585 True 628.0 628 86.2240 2509 3089 1 chr5B.!!$R2 580
19 TraesCS2B01G084500 chr7D 487739148 487739765 617 False 296.0 296 75.8620 1040 1666 1 chr7D.!!$F1 626

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
276 277 0.038983 TCGGCGAAACATCAACTCGA 60.039 50.0 7.35 0.0 34.52 4.04 F
701 702 0.485099 TGCAACCACCCCCATAAACT 59.515 50.0 0.00 0.0 0.00 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1715 1804 0.311165 ACTTCGAGGACTGACACACG 59.689 55.0 0.00 0.0 0.0 4.49 R
2088 2198 0.314935 CGCAACTTGTTGGGCAGAAT 59.685 50.0 15.56 0.0 0.0 2.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.550830 GACTGCAACCCTCAGAAAGA 57.449 50.000 0.00 0.00 35.61 2.52
20 21 2.851195 GACTGCAACCCTCAGAAAGAA 58.149 47.619 0.00 0.00 35.61 2.52
21 22 3.416156 GACTGCAACCCTCAGAAAGAAT 58.584 45.455 0.00 0.00 35.61 2.40
22 23 3.416156 ACTGCAACCCTCAGAAAGAATC 58.584 45.455 0.00 0.00 35.61 2.52
23 24 3.181440 ACTGCAACCCTCAGAAAGAATCA 60.181 43.478 0.00 0.00 35.61 2.57
24 25 3.822735 CTGCAACCCTCAGAAAGAATCAA 59.177 43.478 0.00 0.00 33.54 2.57
25 26 3.822735 TGCAACCCTCAGAAAGAATCAAG 59.177 43.478 0.00 0.00 0.00 3.02
26 27 3.366781 GCAACCCTCAGAAAGAATCAAGC 60.367 47.826 0.00 0.00 0.00 4.01
27 28 2.704572 ACCCTCAGAAAGAATCAAGCG 58.295 47.619 0.00 0.00 0.00 4.68
28 29 2.303022 ACCCTCAGAAAGAATCAAGCGA 59.697 45.455 0.00 0.00 0.00 4.93
29 30 2.675348 CCCTCAGAAAGAATCAAGCGAC 59.325 50.000 0.00 0.00 0.00 5.19
30 31 3.594134 CCTCAGAAAGAATCAAGCGACT 58.406 45.455 0.00 0.00 0.00 4.18
31 32 3.370366 CCTCAGAAAGAATCAAGCGACTG 59.630 47.826 0.00 0.00 0.00 3.51
32 33 4.240888 CTCAGAAAGAATCAAGCGACTGA 58.759 43.478 0.00 0.00 0.00 3.41
33 34 4.825422 TCAGAAAGAATCAAGCGACTGAT 58.175 39.130 0.00 0.00 37.66 2.90
34 35 5.240891 TCAGAAAGAATCAAGCGACTGATT 58.759 37.500 11.03 11.03 46.38 2.57
35 36 5.702670 TCAGAAAGAATCAAGCGACTGATTT 59.297 36.000 12.12 0.57 44.29 2.17
36 37 6.205464 TCAGAAAGAATCAAGCGACTGATTTT 59.795 34.615 12.12 5.74 44.29 1.82
37 38 6.304922 CAGAAAGAATCAAGCGACTGATTTTG 59.695 38.462 12.12 5.18 44.29 2.44
38 39 4.088823 AGAATCAAGCGACTGATTTTGC 57.911 40.909 12.12 2.80 44.29 3.68
39 40 3.503363 AGAATCAAGCGACTGATTTTGCA 59.497 39.130 12.12 0.00 44.29 4.08
40 41 2.975410 TCAAGCGACTGATTTTGCAG 57.025 45.000 0.00 0.00 41.63 4.41
41 42 1.536766 TCAAGCGACTGATTTTGCAGG 59.463 47.619 0.00 0.00 40.20 4.85
42 43 1.536766 CAAGCGACTGATTTTGCAGGA 59.463 47.619 0.00 0.00 40.20 3.86
43 44 1.896220 AGCGACTGATTTTGCAGGAA 58.104 45.000 0.00 0.00 40.20 3.36
44 45 1.808945 AGCGACTGATTTTGCAGGAAG 59.191 47.619 0.00 0.00 40.20 3.46
45 46 1.537202 GCGACTGATTTTGCAGGAAGT 59.463 47.619 0.00 0.00 40.20 3.01
46 47 2.030805 GCGACTGATTTTGCAGGAAGTT 60.031 45.455 0.00 0.00 40.20 2.66
47 48 3.550842 GCGACTGATTTTGCAGGAAGTTT 60.551 43.478 0.00 0.00 40.20 2.66
48 49 4.222114 CGACTGATTTTGCAGGAAGTTTC 58.778 43.478 0.00 0.00 40.20 2.78
86 87 7.935338 TGAAGAATTTGCAGATGAAAAGAAC 57.065 32.000 0.00 0.00 0.00 3.01
87 88 7.719483 TGAAGAATTTGCAGATGAAAAGAACT 58.281 30.769 0.00 0.00 0.00 3.01
88 89 7.650504 TGAAGAATTTGCAGATGAAAAGAACTG 59.349 33.333 0.00 0.00 0.00 3.16
89 90 6.453092 AGAATTTGCAGATGAAAAGAACTGG 58.547 36.000 0.00 0.00 0.00 4.00
90 91 3.648339 TTGCAGATGAAAAGAACTGGC 57.352 42.857 0.00 0.00 0.00 4.85
91 92 1.536766 TGCAGATGAAAAGAACTGGCG 59.463 47.619 0.00 0.00 0.00 5.69
92 93 1.730446 GCAGATGAAAAGAACTGGCGC 60.730 52.381 0.00 0.00 0.00 6.53
93 94 1.536766 CAGATGAAAAGAACTGGCGCA 59.463 47.619 10.83 0.00 0.00 6.09
94 95 2.163010 CAGATGAAAAGAACTGGCGCAT 59.837 45.455 10.83 0.00 0.00 4.73
95 96 3.374988 CAGATGAAAAGAACTGGCGCATA 59.625 43.478 10.83 0.00 0.00 3.14
96 97 3.624861 AGATGAAAAGAACTGGCGCATAG 59.375 43.478 10.83 9.79 0.00 2.23
97 98 3.052455 TGAAAAGAACTGGCGCATAGA 57.948 42.857 10.83 0.00 0.00 1.98
98 99 3.002791 TGAAAAGAACTGGCGCATAGAG 58.997 45.455 10.83 1.08 0.00 2.43
99 100 1.373570 AAAGAACTGGCGCATAGAGC 58.626 50.000 10.83 4.85 40.87 4.09
100 101 0.539051 AAGAACTGGCGCATAGAGCT 59.461 50.000 10.83 7.05 42.61 4.09
101 102 0.179089 AGAACTGGCGCATAGAGCTG 60.179 55.000 10.83 0.00 42.61 4.24
102 103 1.153289 AACTGGCGCATAGAGCTGG 60.153 57.895 10.83 0.00 42.61 4.85
103 104 1.903877 AACTGGCGCATAGAGCTGGT 61.904 55.000 10.83 0.00 42.61 4.00
104 105 1.043116 ACTGGCGCATAGAGCTGGTA 61.043 55.000 10.83 0.00 42.61 3.25
105 106 0.319383 CTGGCGCATAGAGCTGGTAG 60.319 60.000 10.83 0.00 42.61 3.18
106 107 0.755327 TGGCGCATAGAGCTGGTAGA 60.755 55.000 10.83 0.00 42.61 2.59
107 108 0.389391 GGCGCATAGAGCTGGTAGAA 59.611 55.000 10.83 0.00 42.61 2.10
108 109 1.492720 GCGCATAGAGCTGGTAGAAC 58.507 55.000 0.30 0.00 42.61 3.01
109 110 1.759994 CGCATAGAGCTGGTAGAACG 58.240 55.000 0.00 0.00 42.61 3.95
110 111 1.333931 CGCATAGAGCTGGTAGAACGA 59.666 52.381 0.00 0.00 42.61 3.85
111 112 2.733517 GCATAGAGCTGGTAGAACGAC 58.266 52.381 0.00 0.00 41.15 4.34
112 113 2.544069 GCATAGAGCTGGTAGAACGACC 60.544 54.545 0.00 0.00 41.15 4.79
113 114 2.803030 TAGAGCTGGTAGAACGACCT 57.197 50.000 0.00 0.00 40.46 3.85
114 115 1.926108 AGAGCTGGTAGAACGACCTT 58.074 50.000 0.00 0.00 40.46 3.50
115 116 2.249139 AGAGCTGGTAGAACGACCTTT 58.751 47.619 0.00 0.00 40.46 3.11
116 117 2.028930 AGAGCTGGTAGAACGACCTTTG 60.029 50.000 0.00 0.00 40.46 2.77
117 118 1.692519 AGCTGGTAGAACGACCTTTGT 59.307 47.619 5.78 0.00 40.46 2.83
118 119 2.067013 GCTGGTAGAACGACCTTTGTC 58.933 52.381 5.78 0.00 40.46 3.18
119 120 2.547218 GCTGGTAGAACGACCTTTGTCA 60.547 50.000 5.78 0.00 41.85 3.58
120 121 3.724374 CTGGTAGAACGACCTTTGTCAA 58.276 45.455 5.78 0.00 41.85 3.18
121 122 4.315803 CTGGTAGAACGACCTTTGTCAAT 58.684 43.478 5.78 0.00 41.85 2.57
122 123 4.710324 TGGTAGAACGACCTTTGTCAATT 58.290 39.130 5.78 0.00 41.85 2.32
123 124 5.127491 TGGTAGAACGACCTTTGTCAATTT 58.873 37.500 5.78 0.00 41.85 1.82
124 125 5.237779 TGGTAGAACGACCTTTGTCAATTTC 59.762 40.000 5.78 0.00 41.85 2.17
125 126 5.469084 GGTAGAACGACCTTTGTCAATTTCT 59.531 40.000 0.00 0.00 41.85 2.52
126 127 6.647895 GGTAGAACGACCTTTGTCAATTTCTA 59.352 38.462 0.00 0.00 41.85 2.10
127 128 7.333672 GGTAGAACGACCTTTGTCAATTTCTAT 59.666 37.037 0.00 0.00 41.85 1.98
128 129 9.362539 GTAGAACGACCTTTGTCAATTTCTATA 57.637 33.333 0.00 0.00 41.85 1.31
129 130 8.480643 AGAACGACCTTTGTCAATTTCTATAG 57.519 34.615 0.00 0.00 41.85 1.31
130 131 6.663944 ACGACCTTTGTCAATTTCTATAGC 57.336 37.500 0.00 0.00 41.85 2.97
131 132 5.585047 ACGACCTTTGTCAATTTCTATAGCC 59.415 40.000 0.00 0.00 41.85 3.93
132 133 5.584649 CGACCTTTGTCAATTTCTATAGCCA 59.415 40.000 0.00 0.00 41.85 4.75
133 134 6.238211 CGACCTTTGTCAATTTCTATAGCCAG 60.238 42.308 0.00 0.00 41.85 4.85
134 135 6.721318 ACCTTTGTCAATTTCTATAGCCAGA 58.279 36.000 0.00 0.00 0.00 3.86
135 136 7.349598 ACCTTTGTCAATTTCTATAGCCAGAT 58.650 34.615 0.00 0.00 0.00 2.90
136 137 7.836183 ACCTTTGTCAATTTCTATAGCCAGATT 59.164 33.333 0.00 0.00 0.00 2.40
137 138 9.342308 CCTTTGTCAATTTCTATAGCCAGATTA 57.658 33.333 0.00 0.00 0.00 1.75
139 140 9.905713 TTTGTCAATTTCTATAGCCAGATTACT 57.094 29.630 0.00 0.00 0.00 2.24
144 145 9.347934 CAATTTCTATAGCCAGATTACTAGTCG 57.652 37.037 0.00 0.00 0.00 4.18
145 146 8.865420 ATTTCTATAGCCAGATTACTAGTCGA 57.135 34.615 0.00 0.00 0.00 4.20
146 147 8.687292 TTTCTATAGCCAGATTACTAGTCGAA 57.313 34.615 0.00 0.00 0.00 3.71
147 148 7.670009 TCTATAGCCAGATTACTAGTCGAAC 57.330 40.000 0.00 0.00 0.00 3.95
148 149 7.451732 TCTATAGCCAGATTACTAGTCGAACT 58.548 38.462 0.00 0.00 0.00 3.01
149 150 6.963083 ATAGCCAGATTACTAGTCGAACTT 57.037 37.500 0.00 0.00 0.00 2.66
150 151 9.217278 CTATAGCCAGATTACTAGTCGAACTTA 57.783 37.037 0.00 0.00 0.00 2.24
151 152 6.770746 AGCCAGATTACTAGTCGAACTTAA 57.229 37.500 0.00 0.00 0.00 1.85
152 153 7.166691 AGCCAGATTACTAGTCGAACTTAAA 57.833 36.000 0.00 0.00 0.00 1.52
153 154 7.783042 AGCCAGATTACTAGTCGAACTTAAAT 58.217 34.615 0.00 0.00 0.00 1.40
154 155 8.910944 AGCCAGATTACTAGTCGAACTTAAATA 58.089 33.333 0.00 0.00 0.00 1.40
155 156 8.966194 GCCAGATTACTAGTCGAACTTAAATAC 58.034 37.037 0.00 0.00 0.00 1.89
167 168 9.911980 GTCGAACTTAAATACTTATTGTAAGCC 57.088 33.333 0.00 0.00 34.45 4.35
168 169 9.101655 TCGAACTTAAATACTTATTGTAAGCCC 57.898 33.333 0.00 0.00 34.45 5.19
169 170 9.106070 CGAACTTAAATACTTATTGTAAGCCCT 57.894 33.333 0.00 0.00 34.45 5.19
171 172 9.749340 AACTTAAATACTTATTGTAAGCCCTGT 57.251 29.630 0.00 0.00 34.45 4.00
172 173 9.174166 ACTTAAATACTTATTGTAAGCCCTGTG 57.826 33.333 0.00 0.00 34.45 3.66
173 174 9.174166 CTTAAATACTTATTGTAAGCCCTGTGT 57.826 33.333 0.00 0.00 34.45 3.72
174 175 9.523168 TTAAATACTTATTGTAAGCCCTGTGTT 57.477 29.630 0.00 0.00 34.45 3.32
175 176 8.417273 AAATACTTATTGTAAGCCCTGTGTTT 57.583 30.769 0.00 0.00 34.45 2.83
176 177 8.417273 AATACTTATTGTAAGCCCTGTGTTTT 57.583 30.769 0.00 0.00 34.45 2.43
177 178 6.724893 ACTTATTGTAAGCCCTGTGTTTTT 57.275 33.333 0.00 0.00 0.00 1.94
178 179 6.745116 ACTTATTGTAAGCCCTGTGTTTTTC 58.255 36.000 0.00 0.00 0.00 2.29
179 180 6.322712 ACTTATTGTAAGCCCTGTGTTTTTCA 59.677 34.615 0.00 0.00 0.00 2.69
180 181 5.806654 ATTGTAAGCCCTGTGTTTTTCAT 57.193 34.783 0.00 0.00 0.00 2.57
181 182 4.582701 TGTAAGCCCTGTGTTTTTCATG 57.417 40.909 0.00 0.00 0.00 3.07
182 183 4.211125 TGTAAGCCCTGTGTTTTTCATGA 58.789 39.130 0.00 0.00 0.00 3.07
183 184 4.646945 TGTAAGCCCTGTGTTTTTCATGAA 59.353 37.500 3.38 3.38 0.00 2.57
184 185 4.751767 AAGCCCTGTGTTTTTCATGAAA 57.248 36.364 16.91 16.91 0.00 2.69
185 186 4.961438 AGCCCTGTGTTTTTCATGAAAT 57.039 36.364 21.10 0.00 0.00 2.17
186 187 5.294734 AGCCCTGTGTTTTTCATGAAATT 57.705 34.783 21.10 0.00 0.00 1.82
187 188 5.683681 AGCCCTGTGTTTTTCATGAAATTT 58.316 33.333 21.10 0.00 0.00 1.82
188 189 5.528320 AGCCCTGTGTTTTTCATGAAATTTG 59.472 36.000 21.10 8.81 0.00 2.32
189 190 5.277925 GCCCTGTGTTTTTCATGAAATTTGG 60.278 40.000 21.10 15.64 0.00 3.28
190 191 5.277925 CCCTGTGTTTTTCATGAAATTTGGC 60.278 40.000 21.10 11.26 0.00 4.52
191 192 5.401033 TGTGTTTTTCATGAAATTTGGCG 57.599 34.783 21.10 0.00 0.00 5.69
192 193 4.872691 TGTGTTTTTCATGAAATTTGGCGT 59.127 33.333 21.10 0.00 0.00 5.68
193 194 5.196825 GTGTTTTTCATGAAATTTGGCGTG 58.803 37.500 21.10 0.00 0.00 5.34
194 195 4.272018 TGTTTTTCATGAAATTTGGCGTGG 59.728 37.500 21.10 0.00 0.00 4.94
195 196 4.327982 TTTTCATGAAATTTGGCGTGGA 57.672 36.364 21.10 0.00 0.00 4.02
196 197 4.327982 TTTCATGAAATTTGGCGTGGAA 57.672 36.364 16.91 0.00 0.00 3.53
197 198 4.533919 TTCATGAAATTTGGCGTGGAAT 57.466 36.364 5.45 0.00 0.00 3.01
198 199 4.108699 TCATGAAATTTGGCGTGGAATC 57.891 40.909 0.00 0.00 0.00 2.52
199 200 3.763360 TCATGAAATTTGGCGTGGAATCT 59.237 39.130 0.00 0.00 0.00 2.40
200 201 4.220382 TCATGAAATTTGGCGTGGAATCTT 59.780 37.500 0.00 0.00 0.00 2.40
201 202 4.173036 TGAAATTTGGCGTGGAATCTTC 57.827 40.909 0.00 0.00 0.00 2.87
202 203 3.826157 TGAAATTTGGCGTGGAATCTTCT 59.174 39.130 0.00 0.00 0.00 2.85
203 204 5.007034 TGAAATTTGGCGTGGAATCTTCTA 58.993 37.500 0.00 0.00 0.00 2.10
204 205 5.475220 TGAAATTTGGCGTGGAATCTTCTAA 59.525 36.000 0.00 0.00 0.00 2.10
205 206 4.965119 ATTTGGCGTGGAATCTTCTAAC 57.035 40.909 0.00 0.00 0.00 2.34
206 207 3.410631 TTGGCGTGGAATCTTCTAACA 57.589 42.857 0.00 0.00 0.00 2.41
207 208 3.627395 TGGCGTGGAATCTTCTAACAT 57.373 42.857 0.00 0.00 0.00 2.71
208 209 4.746535 TGGCGTGGAATCTTCTAACATA 57.253 40.909 0.00 0.00 0.00 2.29
209 210 5.092554 TGGCGTGGAATCTTCTAACATAA 57.907 39.130 0.00 0.00 0.00 1.90
210 211 5.492895 TGGCGTGGAATCTTCTAACATAAA 58.507 37.500 0.00 0.00 0.00 1.40
211 212 5.941058 TGGCGTGGAATCTTCTAACATAAAA 59.059 36.000 0.00 0.00 0.00 1.52
212 213 6.601613 TGGCGTGGAATCTTCTAACATAAAAT 59.398 34.615 0.00 0.00 0.00 1.82
213 214 7.122055 TGGCGTGGAATCTTCTAACATAAAATT 59.878 33.333 0.00 0.00 0.00 1.82
214 215 7.432252 GGCGTGGAATCTTCTAACATAAAATTG 59.568 37.037 0.00 0.00 0.00 2.32
215 216 8.181573 GCGTGGAATCTTCTAACATAAAATTGA 58.818 33.333 0.00 0.00 0.00 2.57
259 260 8.249327 AGCAATCATAACTATCAAGCTTATCG 57.751 34.615 0.00 0.00 0.00 2.92
260 261 7.332926 AGCAATCATAACTATCAAGCTTATCGG 59.667 37.037 0.00 0.00 0.00 4.18
261 262 7.459486 CAATCATAACTATCAAGCTTATCGGC 58.541 38.462 0.00 0.00 0.00 5.54
262 263 5.161358 TCATAACTATCAAGCTTATCGGCG 58.839 41.667 0.00 0.00 37.29 6.46
263 264 3.728076 AACTATCAAGCTTATCGGCGA 57.272 42.857 13.87 13.87 37.29 5.54
264 265 3.728076 ACTATCAAGCTTATCGGCGAA 57.272 42.857 15.93 0.00 37.29 4.70
265 266 4.054780 ACTATCAAGCTTATCGGCGAAA 57.945 40.909 15.93 8.95 37.29 3.46
266 267 3.802685 ACTATCAAGCTTATCGGCGAAAC 59.197 43.478 15.93 3.47 37.29 2.78
267 268 2.087501 TCAAGCTTATCGGCGAAACA 57.912 45.000 15.93 0.00 37.29 2.83
268 269 2.627945 TCAAGCTTATCGGCGAAACAT 58.372 42.857 15.93 0.00 37.29 2.71
269 270 2.607635 TCAAGCTTATCGGCGAAACATC 59.392 45.455 15.93 2.38 37.29 3.06
270 271 2.309528 AGCTTATCGGCGAAACATCA 57.690 45.000 15.93 0.00 37.29 3.07
271 272 2.627945 AGCTTATCGGCGAAACATCAA 58.372 42.857 15.93 0.57 37.29 2.57
272 273 2.351726 AGCTTATCGGCGAAACATCAAC 59.648 45.455 15.93 0.00 37.29 3.18
273 274 2.351726 GCTTATCGGCGAAACATCAACT 59.648 45.455 15.93 0.00 0.00 3.16
274 275 3.544244 GCTTATCGGCGAAACATCAACTC 60.544 47.826 15.93 0.00 0.00 3.01
275 276 0.999406 ATCGGCGAAACATCAACTCG 59.001 50.000 15.93 0.00 35.70 4.18
276 277 0.038983 TCGGCGAAACATCAACTCGA 60.039 50.000 7.35 0.00 34.52 4.04
282 283 2.408704 CGAAACATCAACTCGACCACTC 59.591 50.000 0.00 0.00 34.52 3.51
289 290 3.374745 TCAACTCGACCACTCGTTTAAC 58.625 45.455 0.00 0.00 41.02 2.01
302 303 9.423061 ACCACTCGTTTAACTATATTTTTACGT 57.577 29.630 0.00 0.00 0.00 3.57
336 337 9.609346 GTATATTACTGGTCAAATACAACCACT 57.391 33.333 0.00 0.00 40.60 4.00
376 377 2.546584 GCCTCCAAAACCAAGCTTTCAG 60.547 50.000 0.00 0.00 0.00 3.02
395 396 0.741915 GTGACCAAAGGGCGTCAAAA 59.258 50.000 0.00 0.00 40.53 2.44
406 407 5.367945 AGGGCGTCAAAATCTATAAGGAA 57.632 39.130 0.00 0.00 0.00 3.36
414 415 6.036844 GTCAAAATCTATAAGGAACCGTGACC 59.963 42.308 0.00 0.00 0.00 4.02
439 440 5.658634 AGGAGATGCTATAGTCACAACTCAA 59.341 40.000 13.97 0.00 36.92 3.02
441 442 6.478344 GGAGATGCTATAGTCACAACTCAAAG 59.522 42.308 13.97 0.00 36.92 2.77
452 453 3.088532 ACAACTCAAAGACAGCACCAAA 58.911 40.909 0.00 0.00 0.00 3.28
466 467 2.555757 GCACCAAAGACAGCAAGAATCT 59.444 45.455 0.00 0.00 0.00 2.40
478 479 9.844257 AGACAGCAAGAATCTTATTAAAGCTAT 57.156 29.630 0.00 0.00 32.36 2.97
489 490 9.914834 ATCTTATTAAAGCTATAACAACCACCA 57.085 29.630 0.00 0.00 32.36 4.17
490 491 9.742144 TCTTATTAAAGCTATAACAACCACCAA 57.258 29.630 0.00 0.00 32.36 3.67
491 492 9.783256 CTTATTAAAGCTATAACAACCACCAAC 57.217 33.333 0.00 0.00 0.00 3.77
492 493 9.523168 TTATTAAAGCTATAACAACCACCAACT 57.477 29.630 0.00 0.00 0.00 3.16
494 495 5.705609 AAGCTATAACAACCACCAACTTG 57.294 39.130 0.00 0.00 0.00 3.16
495 496 4.725490 AGCTATAACAACCACCAACTTGT 58.275 39.130 0.00 0.00 31.76 3.16
497 498 5.704053 AGCTATAACAACCACCAACTTGTAC 59.296 40.000 0.00 0.00 30.26 2.90
498 499 5.470777 GCTATAACAACCACCAACTTGTACA 59.529 40.000 0.00 0.00 30.26 2.90
503 504 7.443259 AACAACCACCAACTTGTACATATAC 57.557 36.000 0.00 0.00 30.26 1.47
505 506 6.877322 ACAACCACCAACTTGTACATATACTC 59.123 38.462 0.00 0.00 32.00 2.59
506 507 5.985911 ACCACCAACTTGTACATATACTCC 58.014 41.667 0.00 0.00 32.00 3.85
507 508 5.104652 ACCACCAACTTGTACATATACTCCC 60.105 44.000 0.00 0.00 32.00 4.30
509 510 6.281405 CACCAACTTGTACATATACTCCCTC 58.719 44.000 0.00 0.00 32.00 4.30
510 511 5.365895 ACCAACTTGTACATATACTCCCTCC 59.634 44.000 0.00 0.00 32.00 4.30
511 512 5.509163 CCAACTTGTACATATACTCCCTCCG 60.509 48.000 0.00 0.00 32.00 4.63
512 513 4.801164 ACTTGTACATATACTCCCTCCGT 58.199 43.478 0.00 0.00 32.00 4.69
513 514 5.206587 ACTTGTACATATACTCCCTCCGTT 58.793 41.667 0.00 0.00 32.00 4.44
514 515 5.301298 ACTTGTACATATACTCCCTCCGTTC 59.699 44.000 0.00 0.00 32.00 3.95
515 516 4.147321 TGTACATATACTCCCTCCGTTCC 58.853 47.826 0.00 0.00 32.00 3.62
516 517 3.614568 ACATATACTCCCTCCGTTCCT 57.385 47.619 0.00 0.00 0.00 3.36
517 518 4.736611 ACATATACTCCCTCCGTTCCTA 57.263 45.455 0.00 0.00 0.00 2.94
518 519 5.070823 ACATATACTCCCTCCGTTCCTAA 57.929 43.478 0.00 0.00 0.00 2.69
519 520 5.461327 ACATATACTCCCTCCGTTCCTAAA 58.539 41.667 0.00 0.00 0.00 1.85
520 521 6.082707 ACATATACTCCCTCCGTTCCTAAAT 58.917 40.000 0.00 0.00 0.00 1.40
521 522 7.243824 ACATATACTCCCTCCGTTCCTAAATA 58.756 38.462 0.00 0.00 0.00 1.40
522 523 7.899709 ACATATACTCCCTCCGTTCCTAAATAT 59.100 37.037 0.00 0.00 0.00 1.28
523 524 9.417561 CATATACTCCCTCCGTTCCTAAATATA 57.582 37.037 0.00 0.00 0.00 0.86
525 526 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
526 527 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
527 528 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
528 529 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
529 530 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
530 531 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
531 532 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
532 533 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
548 549 8.974060 AAGTCTTTGTAAAGTTTCCACTATGA 57.026 30.769 4.45 0.00 37.31 2.15
549 550 8.974060 AGTCTTTGTAAAGTTTCCACTATGAA 57.026 30.769 4.45 0.00 37.31 2.57
550 551 9.574516 AGTCTTTGTAAAGTTTCCACTATGAAT 57.425 29.630 4.45 0.00 37.31 2.57
551 552 9.827411 GTCTTTGTAAAGTTTCCACTATGAATC 57.173 33.333 4.45 0.00 37.31 2.52
552 553 9.567776 TCTTTGTAAAGTTTCCACTATGAATCA 57.432 29.630 4.45 0.00 37.31 2.57
553 554 9.612620 CTTTGTAAAGTTTCCACTATGAATCAC 57.387 33.333 0.00 0.00 30.68 3.06
554 555 8.684386 TTGTAAAGTTTCCACTATGAATCACA 57.316 30.769 0.00 0.00 30.68 3.58
555 556 8.862325 TGTAAAGTTTCCACTATGAATCACAT 57.138 30.769 0.00 0.00 42.39 3.21
556 557 9.952030 TGTAAAGTTTCCACTATGAATCACATA 57.048 29.630 0.00 0.00 40.07 2.29
558 559 7.539712 AAGTTTCCACTATGAATCACATACG 57.460 36.000 0.00 0.00 40.07 3.06
559 560 6.049149 AGTTTCCACTATGAATCACATACGG 58.951 40.000 0.00 0.00 40.07 4.02
560 561 5.862678 TTCCACTATGAATCACATACGGA 57.137 39.130 0.00 0.00 40.07 4.69
561 562 6.419484 TTCCACTATGAATCACATACGGAT 57.581 37.500 0.00 0.00 37.58 4.18
562 563 5.783111 TCCACTATGAATCACATACGGATG 58.217 41.667 5.94 5.94 40.07 3.51
564 565 6.492087 TCCACTATGAATCACATACGGATGTA 59.508 38.462 14.23 2.61 44.82 2.29
565 566 7.178451 TCCACTATGAATCACATACGGATGTAT 59.822 37.037 14.23 5.54 44.82 2.29
566 567 8.466798 CCACTATGAATCACATACGGATGTATA 58.533 37.037 14.23 6.48 44.82 1.47
573 574 9.186323 GAATCACATACGGATGTATATAGATGC 57.814 37.037 14.23 6.60 44.82 3.91
574 575 7.639113 TCACATACGGATGTATATAGATGCA 57.361 36.000 14.23 0.00 44.82 3.96
575 576 8.237811 TCACATACGGATGTATATAGATGCAT 57.762 34.615 14.23 0.00 44.82 3.96
576 577 8.695456 TCACATACGGATGTATATAGATGCATT 58.305 33.333 14.23 1.23 44.82 3.56
577 578 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
578 579 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
582 583 9.944376 ACGGATGTATATAGATGCATTTTAAGT 57.056 29.630 11.19 0.00 38.38 2.24
606 607 9.842775 AGTATAGATTCATTCATTTTGCTCTGA 57.157 29.630 0.00 0.00 0.00 3.27
615 616 6.500684 TTCATTTTGCTCTGAATGTAGTCC 57.499 37.500 0.00 0.00 35.35 3.85
616 617 5.559770 TCATTTTGCTCTGAATGTAGTCCA 58.440 37.500 0.00 0.00 35.35 4.02
617 618 5.412594 TCATTTTGCTCTGAATGTAGTCCAC 59.587 40.000 0.00 0.00 35.35 4.02
618 619 3.334583 TTGCTCTGAATGTAGTCCACC 57.665 47.619 0.00 0.00 0.00 4.61
619 620 2.540383 TGCTCTGAATGTAGTCCACCT 58.460 47.619 0.00 0.00 0.00 4.00
620 621 3.708451 TGCTCTGAATGTAGTCCACCTA 58.292 45.455 0.00 0.00 0.00 3.08
621 622 3.701542 TGCTCTGAATGTAGTCCACCTAG 59.298 47.826 0.00 0.00 0.00 3.02
622 623 3.702045 GCTCTGAATGTAGTCCACCTAGT 59.298 47.826 0.00 0.00 0.00 2.57
623 624 4.440802 GCTCTGAATGTAGTCCACCTAGTG 60.441 50.000 0.00 0.00 0.00 2.74
638 639 6.531503 CACCTAGTGGAATCTCTACAAAGA 57.468 41.667 0.00 0.00 37.04 2.52
639 640 6.334202 CACCTAGTGGAATCTCTACAAAGAC 58.666 44.000 0.00 0.00 37.04 3.01
640 641 6.153680 CACCTAGTGGAATCTCTACAAAGACT 59.846 42.308 0.00 0.00 37.04 3.24
641 642 6.726764 ACCTAGTGGAATCTCTACAAAGACTT 59.273 38.462 0.00 0.00 37.04 3.01
642 643 7.894364 ACCTAGTGGAATCTCTACAAAGACTTA 59.106 37.037 0.00 0.00 37.04 2.24
643 644 8.919145 CCTAGTGGAATCTCTACAAAGACTTAT 58.081 37.037 0.00 0.00 34.57 1.73
657 658 8.943909 ACAAAGACTTATATTTAGGAACCGAG 57.056 34.615 0.00 0.00 0.00 4.63
658 659 7.985752 ACAAAGACTTATATTTAGGAACCGAGG 59.014 37.037 0.00 0.00 0.00 4.63
659 660 6.667558 AGACTTATATTTAGGAACCGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
660 661 6.379579 AGACTTATATTTAGGAACCGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
661 662 6.494146 AGACTTATATTTAGGAACCGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
666 667 3.393426 TTAGGAACCGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
668 669 1.192428 GGAACCGAGGGAGTACATGT 58.808 55.000 2.69 2.69 0.00 3.21
672 673 4.141779 GGAACCGAGGGAGTACATGTAAAT 60.142 45.833 7.25 0.00 0.00 1.40
677 678 5.983720 CCGAGGGAGTACATGTAAATTACAG 59.016 44.000 7.25 6.53 42.77 2.74
679 680 5.681639 AGGGAGTACATGTAAATTACAGGC 58.318 41.667 16.44 3.02 43.70 4.85
683 684 4.873827 AGTACATGTAAATTACAGGCCGTG 59.126 41.667 16.44 9.38 43.70 4.94
700 701 0.606096 GTGCAACCACCCCCATAAAC 59.394 55.000 0.00 0.00 35.92 2.01
701 702 0.485099 TGCAACCACCCCCATAAACT 59.515 50.000 0.00 0.00 0.00 2.66
702 703 1.711375 TGCAACCACCCCCATAAACTA 59.289 47.619 0.00 0.00 0.00 2.24
703 704 2.097036 GCAACCACCCCCATAAACTAC 58.903 52.381 0.00 0.00 0.00 2.73
714 715 7.070821 CACCCCCATAAACTACTACTGAATACT 59.929 40.741 0.00 0.00 0.00 2.12
716 717 8.804204 CCCCCATAAACTACTACTGAATACTAG 58.196 40.741 0.00 0.00 0.00 2.57
718 719 8.857098 CCCATAAACTACTACTGAATACTAGCA 58.143 37.037 0.00 0.00 0.00 3.49
752 753 9.892130 AAAAATGAATACCTTACCACAACAAAA 57.108 25.926 0.00 0.00 0.00 2.44
753 754 9.892130 AAAATGAATACCTTACCACAACAAAAA 57.108 25.926 0.00 0.00 0.00 1.94
798 829 2.341543 ACTGAGCAGTGCCGTCAG 59.658 61.111 25.10 25.10 42.91 3.51
824 855 0.689745 TAAGTAGCCGTGGCCAGGAT 60.690 55.000 26.78 20.22 43.17 3.24
835 870 0.605860 GGCCAGGATATGCTGCAGAG 60.606 60.000 20.43 6.31 0.00 3.35
838 873 2.747467 GCCAGGATATGCTGCAGAGAAA 60.747 50.000 20.43 0.00 0.00 2.52
840 875 4.142790 CCAGGATATGCTGCAGAGAAATT 58.857 43.478 20.43 0.00 0.00 1.82
842 877 5.766670 CCAGGATATGCTGCAGAGAAATTAA 59.233 40.000 20.43 0.00 0.00 1.40
843 878 6.072618 CCAGGATATGCTGCAGAGAAATTAAG 60.073 42.308 20.43 0.00 0.00 1.85
844 879 6.709397 CAGGATATGCTGCAGAGAAATTAAGA 59.291 38.462 20.43 0.00 0.00 2.10
845 880 6.709846 AGGATATGCTGCAGAGAAATTAAGAC 59.290 38.462 20.43 0.00 0.00 3.01
846 881 6.484643 GGATATGCTGCAGAGAAATTAAGACA 59.515 38.462 20.43 0.76 0.00 3.41
847 882 5.557891 ATGCTGCAGAGAAATTAAGACAC 57.442 39.130 20.43 0.00 0.00 3.67
848 883 3.433274 TGCTGCAGAGAAATTAAGACACG 59.567 43.478 20.43 0.00 0.00 4.49
849 884 3.679980 GCTGCAGAGAAATTAAGACACGA 59.320 43.478 20.43 0.00 0.00 4.35
850 885 4.434857 GCTGCAGAGAAATTAAGACACGAC 60.435 45.833 20.43 0.00 0.00 4.34
851 886 4.883083 TGCAGAGAAATTAAGACACGACT 58.117 39.130 0.00 0.00 0.00 4.18
852 887 4.923871 TGCAGAGAAATTAAGACACGACTC 59.076 41.667 0.00 0.00 0.00 3.36
853 888 4.030753 GCAGAGAAATTAAGACACGACTCG 59.969 45.833 0.00 0.00 0.00 4.18
854 889 4.030753 CAGAGAAATTAAGACACGACTCGC 59.969 45.833 0.00 0.00 0.00 5.03
855 890 3.909430 AGAAATTAAGACACGACTCGCA 58.091 40.909 0.00 0.00 0.00 5.10
856 891 4.304110 AGAAATTAAGACACGACTCGCAA 58.696 39.130 0.00 0.00 0.00 4.85
857 892 4.929808 AGAAATTAAGACACGACTCGCAAT 59.070 37.500 0.00 0.00 0.00 3.56
871 937 1.009829 CGCAATAACCAGCAGTCTCC 58.990 55.000 0.00 0.00 0.00 3.71
901 967 3.275400 TGTCACACACACACACAAAAC 57.725 42.857 0.00 0.00 0.00 2.43
902 968 2.618709 TGTCACACACACACACAAAACA 59.381 40.909 0.00 0.00 0.00 2.83
903 969 2.977169 GTCACACACACACACAAAACAC 59.023 45.455 0.00 0.00 0.00 3.32
911 994 3.119849 ACACACACAAAACACAAGAGAGC 60.120 43.478 0.00 0.00 0.00 4.09
912 995 3.127548 CACACACAAAACACAAGAGAGCT 59.872 43.478 0.00 0.00 0.00 4.09
920 1003 2.099405 ACACAAGAGAGCTAGAGAGGC 58.901 52.381 0.00 0.00 0.00 4.70
943 1026 4.692625 CACTAAGTTTGTGATGGAGGTGAG 59.307 45.833 11.45 0.00 37.60 3.51
1174 1260 2.847234 TGGTCACCAAGGTCGGCT 60.847 61.111 0.00 0.00 0.00 5.52
1177 1263 3.691342 TCACCAAGGTCGGCTCCG 61.691 66.667 1.14 1.14 41.35 4.63
1186 1272 4.405671 TCGGCTCCGACGTCTCCT 62.406 66.667 14.70 0.00 44.01 3.69
1329 1415 3.610619 CTGGGACGGCAGCATCACA 62.611 63.158 0.00 1.13 0.00 3.58
1676 1765 3.900601 CAGATGCAGGTACCTCCTAATCT 59.099 47.826 12.84 14.25 46.24 2.40
1685 1774 8.817876 GCAGGTACCTCCTAATCTAATCTAATT 58.182 37.037 12.84 0.00 46.24 1.40
1689 1778 7.021998 ACCTCCTAATCTAATCTAATTGCCC 57.978 40.000 0.00 0.00 0.00 5.36
1715 1804 0.613012 AACTCCCAAGGCCATTGCTC 60.613 55.000 5.01 0.00 37.60 4.26
1743 1837 1.341531 AGTCCTCGAAGTCCACTTGTG 59.658 52.381 0.00 0.00 36.11 3.33
1758 1852 3.747529 CACTTGTGTGACTGATGCATACA 59.252 43.478 0.00 0.00 46.55 2.29
1772 1870 6.862209 TGATGCATACAGTCCAAAATTAACC 58.138 36.000 0.00 0.00 0.00 2.85
1958 2061 3.242316 CGCTTATTTTCGGTGAGCTAACC 60.242 47.826 10.69 10.69 36.82 2.85
1966 2072 3.255725 TCGGTGAGCTAACCAATTAACG 58.744 45.455 20.85 4.31 40.53 3.18
1974 2080 6.373216 TGAGCTAACCAATTAACGTGCTATTT 59.627 34.615 0.00 0.00 0.00 1.40
1979 2085 6.821031 ACCAATTAACGTGCTATTTACCAA 57.179 33.333 0.00 0.00 0.00 3.67
2086 2196 2.091665 GGGGGAATGAATGACCATCAGT 60.092 50.000 0.00 0.00 0.00 3.41
2087 2197 2.954318 GGGGAATGAATGACCATCAGTG 59.046 50.000 0.00 0.00 0.00 3.66
2088 2198 3.371917 GGGGAATGAATGACCATCAGTGA 60.372 47.826 0.00 0.00 0.00 3.41
2089 2199 4.467769 GGGAATGAATGACCATCAGTGAT 58.532 43.478 0.00 0.00 0.00 3.06
2090 2200 4.891756 GGGAATGAATGACCATCAGTGATT 59.108 41.667 1.86 0.00 34.71 2.57
2091 2201 5.009410 GGGAATGAATGACCATCAGTGATTC 59.991 44.000 1.86 9.13 46.03 2.52
2092 2202 5.826737 GGAATGAATGACCATCAGTGATTCT 59.173 40.000 14.81 0.00 46.01 2.40
2093 2203 6.238676 GGAATGAATGACCATCAGTGATTCTG 60.239 42.308 14.81 0.00 46.01 3.02
2094 2204 3.943381 TGAATGACCATCAGTGATTCTGC 59.057 43.478 1.86 0.00 46.01 4.26
2095 2205 2.408271 TGACCATCAGTGATTCTGCC 57.592 50.000 1.86 0.00 43.32 4.85
2096 2206 1.065199 TGACCATCAGTGATTCTGCCC 60.065 52.381 1.86 0.00 43.32 5.36
2097 2207 0.994247 ACCATCAGTGATTCTGCCCA 59.006 50.000 1.86 0.00 43.32 5.36
2098 2208 1.355381 ACCATCAGTGATTCTGCCCAA 59.645 47.619 1.86 0.00 43.32 4.12
2099 2209 1.747355 CCATCAGTGATTCTGCCCAAC 59.253 52.381 1.86 0.00 43.32 3.77
2100 2210 2.439409 CATCAGTGATTCTGCCCAACA 58.561 47.619 1.86 0.00 43.32 3.33
2101 2211 2.655090 TCAGTGATTCTGCCCAACAA 57.345 45.000 0.00 0.00 43.32 2.83
2102 2212 2.507484 TCAGTGATTCTGCCCAACAAG 58.493 47.619 0.00 0.00 43.32 3.16
2628 2830 6.064846 TCATTCTTTTTGCTGTCAGAGTTC 57.935 37.500 3.32 0.00 0.00 3.01
2755 2962 5.836898 AGTTGGCATGGTATCATCATTTCAT 59.163 36.000 0.00 0.00 0.00 2.57
2759 2966 5.421056 GGCATGGTATCATCATTTCATCCAT 59.579 40.000 0.00 0.00 35.23 3.41
2806 3013 3.192633 GGATTACGGCAAAAACTGGATGT 59.807 43.478 0.00 0.00 0.00 3.06
2808 3015 5.448632 GGATTACGGCAAAAACTGGATGTAG 60.449 44.000 0.00 0.00 0.00 2.74
2812 3019 3.252215 CGGCAAAAACTGGATGTAGTTCA 59.748 43.478 0.00 0.00 39.86 3.18
2849 3057 7.020827 ACAATCTCTTTTGAAGTATCAGGGA 57.979 36.000 0.00 0.00 36.78 4.20
2952 3177 5.244402 TCAAAGCCACATCATCAACTTTCAT 59.756 36.000 0.00 0.00 0.00 2.57
2955 3180 3.698040 GCCACATCATCAACTTTCATCCT 59.302 43.478 0.00 0.00 0.00 3.24
3027 3254 9.875691 GAGCTAAATAACCCTGAAATTGAAAAT 57.124 29.630 0.00 0.00 0.00 1.82
3056 3283 7.031226 TCAAATGAACTCTGAAAAGGTTGAG 57.969 36.000 0.00 0.00 0.00 3.02
3067 3294 4.588106 TGAAAAGGTTGAGAATTGGCATGA 59.412 37.500 0.00 0.00 0.00 3.07
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.077359 CGCTTGATTCTTTCTGAGGGTT 58.923 45.455 0.00 0.00 0.00 4.11
8 9 2.675348 GTCGCTTGATTCTTTCTGAGGG 59.325 50.000 0.00 0.00 0.00 4.30
9 10 3.370366 CAGTCGCTTGATTCTTTCTGAGG 59.630 47.826 0.00 0.00 0.00 3.86
10 11 4.240888 TCAGTCGCTTGATTCTTTCTGAG 58.759 43.478 0.00 0.00 0.00 3.35
11 12 4.257267 TCAGTCGCTTGATTCTTTCTGA 57.743 40.909 0.00 0.00 0.00 3.27
12 13 5.542616 AATCAGTCGCTTGATTCTTTCTG 57.457 39.130 7.99 0.00 42.57 3.02
13 14 6.376978 CAAAATCAGTCGCTTGATTCTTTCT 58.623 36.000 12.58 0.00 44.74 2.52
14 15 5.060200 GCAAAATCAGTCGCTTGATTCTTTC 59.940 40.000 12.58 4.07 44.74 2.62
15 16 4.919754 GCAAAATCAGTCGCTTGATTCTTT 59.080 37.500 12.58 4.57 44.74 2.52
16 17 4.022935 TGCAAAATCAGTCGCTTGATTCTT 60.023 37.500 12.58 8.13 44.74 2.52
17 18 3.503363 TGCAAAATCAGTCGCTTGATTCT 59.497 39.130 12.58 0.00 44.74 2.40
18 19 3.825308 TGCAAAATCAGTCGCTTGATTC 58.175 40.909 12.58 4.30 44.74 2.52
19 20 3.366679 CCTGCAAAATCAGTCGCTTGATT 60.367 43.478 7.99 7.99 46.81 2.57
20 21 2.163010 CCTGCAAAATCAGTCGCTTGAT 59.837 45.455 0.00 0.00 39.42 2.57
21 22 1.536766 CCTGCAAAATCAGTCGCTTGA 59.463 47.619 0.00 0.00 32.32 3.02
22 23 1.536766 TCCTGCAAAATCAGTCGCTTG 59.463 47.619 0.00 0.00 32.32 4.01
23 24 1.896220 TCCTGCAAAATCAGTCGCTT 58.104 45.000 0.00 0.00 32.32 4.68
24 25 1.808945 CTTCCTGCAAAATCAGTCGCT 59.191 47.619 0.00 0.00 32.32 4.93
25 26 1.537202 ACTTCCTGCAAAATCAGTCGC 59.463 47.619 0.00 0.00 32.32 5.19
26 27 3.904136 AACTTCCTGCAAAATCAGTCG 57.096 42.857 0.00 0.00 32.32 4.18
27 28 4.550422 GGAAACTTCCTGCAAAATCAGTC 58.450 43.478 0.97 0.00 44.11 3.51
28 29 4.590850 GGAAACTTCCTGCAAAATCAGT 57.409 40.909 0.97 0.00 44.11 3.41
60 61 9.630098 GTTCTTTTCATCTGCAAATTCTTCATA 57.370 29.630 0.00 0.00 0.00 2.15
61 62 8.365647 AGTTCTTTTCATCTGCAAATTCTTCAT 58.634 29.630 0.00 0.00 0.00 2.57
62 63 7.650504 CAGTTCTTTTCATCTGCAAATTCTTCA 59.349 33.333 0.00 0.00 0.00 3.02
63 64 7.115947 CCAGTTCTTTTCATCTGCAAATTCTTC 59.884 37.037 0.00 0.00 0.00 2.87
64 65 6.927381 CCAGTTCTTTTCATCTGCAAATTCTT 59.073 34.615 0.00 0.00 0.00 2.52
65 66 6.453092 CCAGTTCTTTTCATCTGCAAATTCT 58.547 36.000 0.00 0.00 0.00 2.40
66 67 5.119743 GCCAGTTCTTTTCATCTGCAAATTC 59.880 40.000 0.00 0.00 0.00 2.17
67 68 4.992951 GCCAGTTCTTTTCATCTGCAAATT 59.007 37.500 0.00 0.00 0.00 1.82
68 69 4.563061 GCCAGTTCTTTTCATCTGCAAAT 58.437 39.130 0.00 0.00 0.00 2.32
69 70 3.550639 CGCCAGTTCTTTTCATCTGCAAA 60.551 43.478 0.00 0.00 0.00 3.68
70 71 2.030893 CGCCAGTTCTTTTCATCTGCAA 60.031 45.455 0.00 0.00 0.00 4.08
71 72 1.536766 CGCCAGTTCTTTTCATCTGCA 59.463 47.619 0.00 0.00 0.00 4.41
72 73 1.730446 GCGCCAGTTCTTTTCATCTGC 60.730 52.381 0.00 0.00 0.00 4.26
73 74 1.536766 TGCGCCAGTTCTTTTCATCTG 59.463 47.619 4.18 0.00 0.00 2.90
74 75 1.896220 TGCGCCAGTTCTTTTCATCT 58.104 45.000 4.18 0.00 0.00 2.90
75 76 2.927553 ATGCGCCAGTTCTTTTCATC 57.072 45.000 4.18 0.00 0.00 2.92
76 77 3.609853 TCTATGCGCCAGTTCTTTTCAT 58.390 40.909 4.18 0.00 0.00 2.57
77 78 3.002791 CTCTATGCGCCAGTTCTTTTCA 58.997 45.455 4.18 0.00 0.00 2.69
78 79 2.223135 GCTCTATGCGCCAGTTCTTTTC 60.223 50.000 4.18 0.00 0.00 2.29
79 80 1.740025 GCTCTATGCGCCAGTTCTTTT 59.260 47.619 4.18 0.00 0.00 2.27
80 81 1.373570 GCTCTATGCGCCAGTTCTTT 58.626 50.000 4.18 0.00 0.00 2.52
81 82 3.071580 GCTCTATGCGCCAGTTCTT 57.928 52.632 4.18 0.00 0.00 2.52
82 83 4.844420 GCTCTATGCGCCAGTTCT 57.156 55.556 4.18 0.00 0.00 3.01
91 92 2.544069 GGTCGTTCTACCAGCTCTATGC 60.544 54.545 0.00 0.00 39.50 3.14
92 93 2.952978 AGGTCGTTCTACCAGCTCTATG 59.047 50.000 0.00 0.00 42.40 2.23
93 94 3.300239 AGGTCGTTCTACCAGCTCTAT 57.700 47.619 0.00 0.00 42.40 1.98
94 95 2.803030 AGGTCGTTCTACCAGCTCTA 57.197 50.000 0.00 0.00 42.40 2.43
95 96 1.926108 AAGGTCGTTCTACCAGCTCT 58.074 50.000 0.00 0.00 42.40 4.09
96 97 2.288886 ACAAAGGTCGTTCTACCAGCTC 60.289 50.000 0.00 0.00 42.40 4.09
97 98 1.692519 ACAAAGGTCGTTCTACCAGCT 59.307 47.619 0.00 0.00 42.40 4.24
98 99 2.067013 GACAAAGGTCGTTCTACCAGC 58.933 52.381 0.00 0.00 42.40 4.85
109 110 6.823689 TCTGGCTATAGAAATTGACAAAGGTC 59.176 38.462 3.21 0.00 44.57 3.85
110 111 6.721318 TCTGGCTATAGAAATTGACAAAGGT 58.279 36.000 3.21 0.00 0.00 3.50
111 112 7.814264 ATCTGGCTATAGAAATTGACAAAGG 57.186 36.000 3.21 0.00 0.00 3.11
113 114 9.905713 AGTAATCTGGCTATAGAAATTGACAAA 57.094 29.630 3.21 0.00 0.00 2.83
118 119 9.347934 CGACTAGTAATCTGGCTATAGAAATTG 57.652 37.037 3.21 0.00 0.00 2.32
119 120 9.298250 TCGACTAGTAATCTGGCTATAGAAATT 57.702 33.333 3.21 0.00 0.00 1.82
120 121 8.865420 TCGACTAGTAATCTGGCTATAGAAAT 57.135 34.615 3.21 0.00 0.00 2.17
121 122 8.566260 GTTCGACTAGTAATCTGGCTATAGAAA 58.434 37.037 3.21 0.00 0.00 2.52
122 123 7.937942 AGTTCGACTAGTAATCTGGCTATAGAA 59.062 37.037 3.21 0.00 0.00 2.10
123 124 7.451732 AGTTCGACTAGTAATCTGGCTATAGA 58.548 38.462 3.21 0.00 0.00 1.98
124 125 7.675962 AGTTCGACTAGTAATCTGGCTATAG 57.324 40.000 0.00 0.00 0.00 1.31
125 126 9.565090 TTAAGTTCGACTAGTAATCTGGCTATA 57.435 33.333 0.00 0.00 0.00 1.31
126 127 6.963083 AAGTTCGACTAGTAATCTGGCTAT 57.037 37.500 0.00 0.00 0.00 2.97
127 128 7.870509 TTAAGTTCGACTAGTAATCTGGCTA 57.129 36.000 0.00 0.00 0.00 3.93
128 129 6.770746 TTAAGTTCGACTAGTAATCTGGCT 57.229 37.500 0.00 0.00 0.00 4.75
129 130 8.966194 GTATTTAAGTTCGACTAGTAATCTGGC 58.034 37.037 0.00 0.00 0.00 4.85
141 142 9.911980 GGCTTACAATAAGTATTTAAGTTCGAC 57.088 33.333 0.00 0.00 31.53 4.20
142 143 9.101655 GGGCTTACAATAAGTATTTAAGTTCGA 57.898 33.333 0.00 0.00 31.53 3.71
143 144 9.106070 AGGGCTTACAATAAGTATTTAAGTTCG 57.894 33.333 0.00 0.00 31.53 3.95
145 146 9.749340 ACAGGGCTTACAATAAGTATTTAAGTT 57.251 29.630 0.00 0.00 31.53 2.66
146 147 9.174166 CACAGGGCTTACAATAAGTATTTAAGT 57.826 33.333 0.00 0.00 31.53 2.24
147 148 9.174166 ACACAGGGCTTACAATAAGTATTTAAG 57.826 33.333 0.00 0.00 31.53 1.85
148 149 9.523168 AACACAGGGCTTACAATAAGTATTTAA 57.477 29.630 0.00 0.00 31.53 1.52
149 150 9.523168 AAACACAGGGCTTACAATAAGTATTTA 57.477 29.630 0.00 0.00 31.53 1.40
150 151 8.417273 AAACACAGGGCTTACAATAAGTATTT 57.583 30.769 0.00 0.00 31.53 1.40
151 152 8.417273 AAAACACAGGGCTTACAATAAGTATT 57.583 30.769 0.00 0.00 31.53 1.89
152 153 8.417273 AAAAACACAGGGCTTACAATAAGTAT 57.583 30.769 0.00 0.00 31.53 2.12
153 154 7.502895 TGAAAAACACAGGGCTTACAATAAGTA 59.497 33.333 0.00 0.00 0.00 2.24
154 155 6.322712 TGAAAAACACAGGGCTTACAATAAGT 59.677 34.615 0.00 0.00 0.00 2.24
155 156 6.744112 TGAAAAACACAGGGCTTACAATAAG 58.256 36.000 0.00 0.00 0.00 1.73
156 157 6.716934 TGAAAAACACAGGGCTTACAATAA 57.283 33.333 0.00 0.00 0.00 1.40
157 158 6.491745 TCATGAAAAACACAGGGCTTACAATA 59.508 34.615 0.00 0.00 0.00 1.90
158 159 5.304101 TCATGAAAAACACAGGGCTTACAAT 59.696 36.000 0.00 0.00 0.00 2.71
159 160 4.646945 TCATGAAAAACACAGGGCTTACAA 59.353 37.500 0.00 0.00 0.00 2.41
160 161 4.211125 TCATGAAAAACACAGGGCTTACA 58.789 39.130 0.00 0.00 0.00 2.41
161 162 4.846779 TCATGAAAAACACAGGGCTTAC 57.153 40.909 0.00 0.00 0.00 2.34
162 163 5.860941 TTTCATGAAAAACACAGGGCTTA 57.139 34.783 18.45 0.00 0.00 3.09
163 164 4.751767 TTTCATGAAAAACACAGGGCTT 57.248 36.364 18.45 0.00 0.00 4.35
164 165 4.961438 ATTTCATGAAAAACACAGGGCT 57.039 36.364 23.91 1.51 33.56 5.19
165 166 5.277925 CCAAATTTCATGAAAAACACAGGGC 60.278 40.000 23.91 0.00 33.56 5.19
166 167 5.277925 GCCAAATTTCATGAAAAACACAGGG 60.278 40.000 23.91 17.56 33.56 4.45
167 168 5.558653 CGCCAAATTTCATGAAAAACACAGG 60.559 40.000 23.91 18.68 33.56 4.00
168 169 5.006552 ACGCCAAATTTCATGAAAAACACAG 59.993 36.000 23.91 15.94 33.56 3.66
169 170 4.872691 ACGCCAAATTTCATGAAAAACACA 59.127 33.333 23.91 1.07 33.56 3.72
170 171 5.196825 CACGCCAAATTTCATGAAAAACAC 58.803 37.500 23.91 11.95 33.56 3.32
171 172 4.272018 CCACGCCAAATTTCATGAAAAACA 59.728 37.500 23.91 2.26 33.56 2.83
172 173 4.509600 TCCACGCCAAATTTCATGAAAAAC 59.490 37.500 23.91 11.01 33.56 2.43
173 174 4.697514 TCCACGCCAAATTTCATGAAAAA 58.302 34.783 23.91 3.45 33.56 1.94
174 175 4.327982 TCCACGCCAAATTTCATGAAAA 57.672 36.364 23.91 8.65 33.56 2.29
175 176 4.327982 TTCCACGCCAAATTTCATGAAA 57.672 36.364 22.52 22.52 34.46 2.69
176 177 4.220382 AGATTCCACGCCAAATTTCATGAA 59.780 37.500 3.38 3.38 0.00 2.57
177 178 3.763360 AGATTCCACGCCAAATTTCATGA 59.237 39.130 0.00 0.00 0.00 3.07
178 179 4.114058 AGATTCCACGCCAAATTTCATG 57.886 40.909 0.00 0.00 0.00 3.07
179 180 4.463891 AGAAGATTCCACGCCAAATTTCAT 59.536 37.500 0.00 0.00 0.00 2.57
180 181 3.826157 AGAAGATTCCACGCCAAATTTCA 59.174 39.130 0.00 0.00 0.00 2.69
181 182 4.440839 AGAAGATTCCACGCCAAATTTC 57.559 40.909 0.00 0.00 0.00 2.17
182 183 5.242838 TGTTAGAAGATTCCACGCCAAATTT 59.757 36.000 0.00 0.00 0.00 1.82
183 184 4.764823 TGTTAGAAGATTCCACGCCAAATT 59.235 37.500 0.00 0.00 0.00 1.82
184 185 4.331968 TGTTAGAAGATTCCACGCCAAAT 58.668 39.130 0.00 0.00 0.00 2.32
185 186 3.745799 TGTTAGAAGATTCCACGCCAAA 58.254 40.909 0.00 0.00 0.00 3.28
186 187 3.410631 TGTTAGAAGATTCCACGCCAA 57.589 42.857 0.00 0.00 0.00 4.52
187 188 3.627395 ATGTTAGAAGATTCCACGCCA 57.373 42.857 0.00 0.00 0.00 5.69
188 189 6.431198 TTTTATGTTAGAAGATTCCACGCC 57.569 37.500 0.00 0.00 0.00 5.68
189 190 8.181573 TCAATTTTATGTTAGAAGATTCCACGC 58.818 33.333 0.00 0.00 0.00 5.34
233 234 9.358872 CGATAAGCTTGATAGTTATGATTGCTA 57.641 33.333 9.86 0.00 0.00 3.49
234 235 7.332926 CCGATAAGCTTGATAGTTATGATTGCT 59.667 37.037 9.86 0.00 0.00 3.91
235 236 7.459486 CCGATAAGCTTGATAGTTATGATTGC 58.541 38.462 9.86 0.00 0.00 3.56
236 237 7.459486 GCCGATAAGCTTGATAGTTATGATTG 58.541 38.462 9.86 0.00 0.00 2.67
237 238 6.311445 CGCCGATAAGCTTGATAGTTATGATT 59.689 38.462 9.86 0.00 0.00 2.57
238 239 5.807520 CGCCGATAAGCTTGATAGTTATGAT 59.192 40.000 9.86 0.00 0.00 2.45
239 240 5.048294 TCGCCGATAAGCTTGATAGTTATGA 60.048 40.000 9.86 0.00 0.00 2.15
240 241 5.161358 TCGCCGATAAGCTTGATAGTTATG 58.839 41.667 9.86 0.00 0.00 1.90
241 242 5.386958 TCGCCGATAAGCTTGATAGTTAT 57.613 39.130 9.86 0.00 0.00 1.89
242 243 4.841443 TCGCCGATAAGCTTGATAGTTA 57.159 40.909 9.86 0.00 0.00 2.24
243 244 3.728076 TCGCCGATAAGCTTGATAGTT 57.272 42.857 9.86 0.00 0.00 2.24
244 245 3.728076 TTCGCCGATAAGCTTGATAGT 57.272 42.857 9.86 0.00 0.00 2.12
245 246 3.802139 TGTTTCGCCGATAAGCTTGATAG 59.198 43.478 9.86 0.00 0.00 2.08
246 247 3.787785 TGTTTCGCCGATAAGCTTGATA 58.212 40.909 9.86 0.00 0.00 2.15
247 248 2.627945 TGTTTCGCCGATAAGCTTGAT 58.372 42.857 9.86 0.00 0.00 2.57
248 249 2.087501 TGTTTCGCCGATAAGCTTGA 57.912 45.000 9.86 0.00 0.00 3.02
249 250 2.351418 TGATGTTTCGCCGATAAGCTTG 59.649 45.455 9.86 0.00 0.00 4.01
250 251 2.627945 TGATGTTTCGCCGATAAGCTT 58.372 42.857 3.48 3.48 0.00 3.74
251 252 2.309528 TGATGTTTCGCCGATAAGCT 57.690 45.000 0.00 0.00 0.00 3.74
252 253 2.351726 AGTTGATGTTTCGCCGATAAGC 59.648 45.455 0.00 0.00 0.00 3.09
253 254 3.301835 CGAGTTGATGTTTCGCCGATAAG 60.302 47.826 0.00 0.00 0.00 1.73
254 255 2.601314 CGAGTTGATGTTTCGCCGATAA 59.399 45.455 0.00 0.00 0.00 1.75
255 256 2.159352 TCGAGTTGATGTTTCGCCGATA 60.159 45.455 0.00 0.00 34.52 2.92
256 257 0.999406 CGAGTTGATGTTTCGCCGAT 59.001 50.000 0.00 0.00 0.00 4.18
257 258 0.038983 TCGAGTTGATGTTTCGCCGA 60.039 50.000 0.00 0.00 34.52 5.54
258 259 0.093026 GTCGAGTTGATGTTTCGCCG 59.907 55.000 0.00 0.00 34.52 6.46
259 260 0.442699 GGTCGAGTTGATGTTTCGCC 59.557 55.000 0.00 0.00 34.52 5.54
260 261 1.136336 GTGGTCGAGTTGATGTTTCGC 60.136 52.381 0.00 0.00 34.52 4.70
261 262 2.404215 AGTGGTCGAGTTGATGTTTCG 58.596 47.619 0.00 0.00 35.76 3.46
275 276 9.891535 CGTAAAAATATAGTTAAACGAGTGGTC 57.108 33.333 12.11 0.00 0.00 4.02
276 277 9.423061 ACGTAAAAATATAGTTAAACGAGTGGT 57.577 29.630 20.08 2.34 33.59 4.16
309 310 9.386010 GTGGTTGTATTTGACCAGTAATATACA 57.614 33.333 0.00 0.00 45.99 2.29
326 327 8.491134 TCCAGCAGTTTATATAAGTGGTTGTAT 58.509 33.333 8.24 0.00 0.00 2.29
328 329 6.717289 TCCAGCAGTTTATATAAGTGGTTGT 58.283 36.000 8.24 0.00 0.00 3.32
376 377 0.741915 TTTTGACGCCCTTTGGTCAC 59.258 50.000 0.00 0.00 42.43 3.67
395 396 3.641906 CCTGGTCACGGTTCCTTATAGAT 59.358 47.826 0.00 0.00 0.00 1.98
406 407 0.324368 TAGCATCTCCTGGTCACGGT 60.324 55.000 0.00 0.00 36.79 4.83
414 415 5.068329 TGAGTTGTGACTATAGCATCTCCTG 59.932 44.000 0.00 0.00 35.88 3.86
439 440 1.312815 GCTGTCTTTGGTGCTGTCTT 58.687 50.000 0.00 0.00 0.00 3.01
441 442 1.002033 CTTGCTGTCTTTGGTGCTGTC 60.002 52.381 0.00 0.00 0.00 3.51
452 453 9.844257 ATAGCTTTAATAAGATTCTTGCTGTCT 57.156 29.630 9.22 1.24 32.92 3.41
466 467 9.523168 AGTTGGTGGTTGTTATAGCTTTAATAA 57.477 29.630 0.00 0.00 0.00 1.40
478 479 8.377034 AGTATATGTACAAGTTGGTGGTTGTTA 58.623 33.333 7.96 0.00 37.96 2.41
487 488 5.509163 CGGAGGGAGTATATGTACAAGTTGG 60.509 48.000 7.96 0.00 33.09 3.77
489 490 5.206587 ACGGAGGGAGTATATGTACAAGTT 58.793 41.667 0.00 0.00 33.09 2.66
490 491 4.801164 ACGGAGGGAGTATATGTACAAGT 58.199 43.478 0.00 0.00 33.09 3.16
491 492 5.278858 GGAACGGAGGGAGTATATGTACAAG 60.279 48.000 0.00 0.00 33.09 3.16
492 493 4.586001 GGAACGGAGGGAGTATATGTACAA 59.414 45.833 0.00 0.00 33.09 2.41
494 495 4.405548 AGGAACGGAGGGAGTATATGTAC 58.594 47.826 0.00 0.00 0.00 2.90
495 496 4.736611 AGGAACGGAGGGAGTATATGTA 57.263 45.455 0.00 0.00 0.00 2.29
497 498 6.607004 ATTTAGGAACGGAGGGAGTATATG 57.393 41.667 0.00 0.00 0.00 1.78
503 504 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
505 506 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
506 507 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
507 508 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
523 524 8.974060 TCATAGTGGAAACTTTACAAAGACTT 57.026 30.769 8.65 1.94 39.31 3.01
524 525 8.974060 TTCATAGTGGAAACTTTACAAAGACT 57.026 30.769 8.65 4.00 39.31 3.24
525 526 9.827411 GATTCATAGTGGAAACTTTACAAAGAC 57.173 33.333 8.65 0.00 39.31 3.01
526 527 9.567776 TGATTCATAGTGGAAACTTTACAAAGA 57.432 29.630 8.65 0.00 39.31 2.52
527 528 9.612620 GTGATTCATAGTGGAAACTTTACAAAG 57.387 33.333 0.13 0.13 41.73 2.77
528 529 9.126151 TGTGATTCATAGTGGAAACTTTACAAA 57.874 29.630 0.00 0.00 0.00 2.83
529 530 8.684386 TGTGATTCATAGTGGAAACTTTACAA 57.316 30.769 0.00 0.00 0.00 2.41
530 531 8.862325 ATGTGATTCATAGTGGAAACTTTACA 57.138 30.769 0.00 0.00 34.67 2.41
532 533 9.093970 CGTATGTGATTCATAGTGGAAACTTTA 57.906 33.333 0.00 0.00 39.36 1.85
533 534 7.065803 CCGTATGTGATTCATAGTGGAAACTTT 59.934 37.037 0.00 0.00 39.36 2.66
534 535 6.538742 CCGTATGTGATTCATAGTGGAAACTT 59.461 38.462 0.00 0.00 39.36 2.66
535 536 6.049149 CCGTATGTGATTCATAGTGGAAACT 58.951 40.000 0.00 0.00 39.36 2.66
536 537 6.046593 TCCGTATGTGATTCATAGTGGAAAC 58.953 40.000 0.00 0.00 39.60 2.78
537 538 6.228616 TCCGTATGTGATTCATAGTGGAAA 57.771 37.500 0.00 0.00 39.60 3.13
538 539 5.862678 TCCGTATGTGATTCATAGTGGAA 57.137 39.130 0.00 0.00 39.60 3.53
539 540 5.304357 ACATCCGTATGTGATTCATAGTGGA 59.696 40.000 0.00 9.57 44.79 4.02
540 541 5.541845 ACATCCGTATGTGATTCATAGTGG 58.458 41.667 0.00 0.00 44.79 4.00
547 548 9.186323 GCATCTATATACATCCGTATGTGATTC 57.814 37.037 3.56 0.00 45.99 2.52
548 549 8.695456 TGCATCTATATACATCCGTATGTGATT 58.305 33.333 3.56 0.00 45.99 2.57
549 550 8.237811 TGCATCTATATACATCCGTATGTGAT 57.762 34.615 3.56 0.26 45.99 3.06
550 551 7.639113 TGCATCTATATACATCCGTATGTGA 57.361 36.000 3.56 0.00 45.99 3.58
551 552 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
556 557 9.944376 ACTTAAAATGCATCTATATACATCCGT 57.056 29.630 0.00 0.00 0.00 4.69
580 581 9.842775 TCAGAGCAAAATGAATGAATCTATACT 57.157 29.630 0.00 0.00 0.00 2.12
591 592 6.660521 TGGACTACATTCAGAGCAAAATGAAT 59.339 34.615 2.36 4.31 44.85 2.57
592 593 6.003326 TGGACTACATTCAGAGCAAAATGAA 58.997 36.000 2.36 2.39 39.59 2.57
593 594 5.412594 GTGGACTACATTCAGAGCAAAATGA 59.587 40.000 2.36 0.00 36.57 2.57
594 595 5.392380 GGTGGACTACATTCAGAGCAAAATG 60.392 44.000 0.00 0.00 38.54 2.32
595 596 4.702131 GGTGGACTACATTCAGAGCAAAAT 59.298 41.667 0.00 0.00 0.00 1.82
596 597 4.072131 GGTGGACTACATTCAGAGCAAAA 58.928 43.478 0.00 0.00 0.00 2.44
597 598 3.327757 AGGTGGACTACATTCAGAGCAAA 59.672 43.478 0.00 0.00 0.00 3.68
598 599 2.906389 AGGTGGACTACATTCAGAGCAA 59.094 45.455 0.00 0.00 0.00 3.91
599 600 2.540383 AGGTGGACTACATTCAGAGCA 58.460 47.619 0.00 0.00 0.00 4.26
600 601 3.702045 ACTAGGTGGACTACATTCAGAGC 59.298 47.826 0.00 0.00 0.00 4.09
601 602 5.255710 CACTAGGTGGACTACATTCAGAG 57.744 47.826 0.00 0.00 0.00 3.35
615 616 6.153680 AGTCTTTGTAGAGATTCCACTAGGTG 59.846 42.308 0.00 0.00 35.89 4.00
616 617 6.257586 AGTCTTTGTAGAGATTCCACTAGGT 58.742 40.000 0.00 0.00 35.89 3.08
617 618 6.783708 AGTCTTTGTAGAGATTCCACTAGG 57.216 41.667 0.00 0.00 0.00 3.02
632 633 7.985752 CCTCGGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
633 634 7.441458 CCCTCGGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
634 635 7.346436 TCCCTCGGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
635 636 6.842807 TCCCTCGGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
636 637 6.379579 TCCCTCGGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
637 638 6.267242 ACTCCCTCGGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
638 639 6.141790 ACTCCCTCGGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
639 640 6.667558 ACTCCCTCGGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
640 641 7.068702 TGTACTCCCTCGGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
641 642 6.613699 TGTACTCCCTCGGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
642 643 5.461327 TGTACTCCCTCGGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
643 644 4.870636 TGTACTCCCTCGGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
644 645 3.716431 TGTACTCCCTCGGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
645 646 3.173953 TGTACTCCCTCGGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
646 647 2.905415 TGTACTCCCTCGGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
647 648 2.024655 ACATGTACTCCCTCGGTTCCTA 60.025 50.000 0.00 0.00 0.00 2.94
648 649 1.273098 ACATGTACTCCCTCGGTTCCT 60.273 52.381 0.00 0.00 0.00 3.36
649 650 1.192428 ACATGTACTCCCTCGGTTCC 58.808 55.000 0.00 0.00 0.00 3.62
650 651 4.460948 TTTACATGTACTCCCTCGGTTC 57.539 45.455 4.68 0.00 0.00 3.62
651 652 5.431179 AATTTACATGTACTCCCTCGGTT 57.569 39.130 4.68 0.00 0.00 4.44
652 653 5.422970 TGTAATTTACATGTACTCCCTCGGT 59.577 40.000 4.68 0.00 32.89 4.69
653 654 5.909477 TGTAATTTACATGTACTCCCTCGG 58.091 41.667 4.68 0.00 32.89 4.63
654 655 5.983720 CCTGTAATTTACATGTACTCCCTCG 59.016 44.000 4.68 0.00 38.15 4.63
655 656 5.758784 GCCTGTAATTTACATGTACTCCCTC 59.241 44.000 4.68 0.00 38.15 4.30
656 657 5.397559 GGCCTGTAATTTACATGTACTCCCT 60.398 44.000 4.68 0.00 38.15 4.20
657 658 4.820173 GGCCTGTAATTTACATGTACTCCC 59.180 45.833 4.68 0.97 38.15 4.30
658 659 4.510340 CGGCCTGTAATTTACATGTACTCC 59.490 45.833 4.68 3.72 38.15 3.85
659 660 5.006358 CACGGCCTGTAATTTACATGTACTC 59.994 44.000 4.68 0.00 38.15 2.59
660 661 4.873827 CACGGCCTGTAATTTACATGTACT 59.126 41.667 4.68 0.00 38.15 2.73
661 662 4.495184 GCACGGCCTGTAATTTACATGTAC 60.495 45.833 4.68 0.00 38.15 2.90
666 667 2.186532 TGCACGGCCTGTAATTTACA 57.813 45.000 8.86 8.86 37.13 2.41
668 669 1.813786 GGTTGCACGGCCTGTAATTTA 59.186 47.619 0.00 0.00 0.00 1.40
672 673 1.894756 GTGGTTGCACGGCCTGTAA 60.895 57.895 0.00 1.11 0.00 2.41
679 680 2.773007 TTATGGGGGTGGTTGCACGG 62.773 60.000 0.00 0.00 0.00 4.94
683 684 2.097036 GTAGTTTATGGGGGTGGTTGC 58.903 52.381 0.00 0.00 0.00 4.17
700 701 9.817809 TTTTGGATTGCTAGTATTCAGTAGTAG 57.182 33.333 5.31 0.00 38.73 2.57
727 728 9.892130 TTTTTGTTGTGGTAAGGTATTCATTTT 57.108 25.926 0.00 0.00 0.00 1.82
824 855 5.291858 CGTGTCTTAATTTCTCTGCAGCATA 59.708 40.000 9.47 0.00 0.00 3.14
835 870 4.640805 TTGCGAGTCGTGTCTTAATTTC 57.359 40.909 15.08 0.00 0.00 2.17
838 873 4.565564 GGTTATTGCGAGTCGTGTCTTAAT 59.434 41.667 15.08 8.09 0.00 1.40
840 875 3.057386 TGGTTATTGCGAGTCGTGTCTTA 60.057 43.478 15.08 0.00 0.00 2.10
842 877 1.271379 TGGTTATTGCGAGTCGTGTCT 59.729 47.619 15.08 0.00 0.00 3.41
843 878 1.654105 CTGGTTATTGCGAGTCGTGTC 59.346 52.381 15.08 0.00 0.00 3.67
844 879 1.710013 CTGGTTATTGCGAGTCGTGT 58.290 50.000 15.08 3.15 0.00 4.49
845 880 0.370273 GCTGGTTATTGCGAGTCGTG 59.630 55.000 15.08 0.00 0.00 4.35
846 881 0.037697 TGCTGGTTATTGCGAGTCGT 60.038 50.000 15.08 0.00 0.00 4.34
847 882 0.647410 CTGCTGGTTATTGCGAGTCG 59.353 55.000 8.54 8.54 0.00 4.18
848 883 1.661112 GACTGCTGGTTATTGCGAGTC 59.339 52.381 0.00 0.00 33.74 3.36
849 884 1.276421 AGACTGCTGGTTATTGCGAGT 59.724 47.619 0.00 0.00 0.00 4.18
850 885 1.929836 GAGACTGCTGGTTATTGCGAG 59.070 52.381 0.00 0.00 0.00 5.03
851 886 1.405526 GGAGACTGCTGGTTATTGCGA 60.406 52.381 0.00 0.00 0.00 5.10
852 887 1.009829 GGAGACTGCTGGTTATTGCG 58.990 55.000 0.00 0.00 0.00 4.85
853 888 1.383523 GGGAGACTGCTGGTTATTGC 58.616 55.000 0.00 0.00 0.00 3.56
854 889 1.743772 CGGGGAGACTGCTGGTTATTG 60.744 57.143 0.00 0.00 0.00 1.90
855 890 0.541863 CGGGGAGACTGCTGGTTATT 59.458 55.000 0.00 0.00 0.00 1.40
856 891 0.325296 TCGGGGAGACTGCTGGTTAT 60.325 55.000 0.00 0.00 0.00 1.89
857 892 0.970937 CTCGGGGAGACTGCTGGTTA 60.971 60.000 0.00 0.00 0.00 2.85
871 937 2.357517 GTGTGACACTGGCTCGGG 60.358 66.667 8.76 0.00 0.00 5.14
896 962 4.928615 CCTCTCTAGCTCTCTTGTGTTTTG 59.071 45.833 0.00 0.00 0.00 2.44
897 963 4.562552 GCCTCTCTAGCTCTCTTGTGTTTT 60.563 45.833 0.00 0.00 0.00 2.43
898 964 3.056179 GCCTCTCTAGCTCTCTTGTGTTT 60.056 47.826 0.00 0.00 0.00 2.83
899 965 2.495669 GCCTCTCTAGCTCTCTTGTGTT 59.504 50.000 0.00 0.00 0.00 3.32
901 967 2.098614 TGCCTCTCTAGCTCTCTTGTG 58.901 52.381 0.00 0.00 0.00 3.33
902 968 2.099405 GTGCCTCTCTAGCTCTCTTGT 58.901 52.381 0.00 0.00 0.00 3.16
903 969 2.378038 AGTGCCTCTCTAGCTCTCTTG 58.622 52.381 0.00 0.00 28.28 3.02
911 994 5.392767 TCACAAACTTAGTGCCTCTCTAG 57.607 43.478 0.00 0.00 36.93 2.43
912 995 5.337571 CCATCACAAACTTAGTGCCTCTCTA 60.338 44.000 0.00 0.00 36.93 2.43
920 1003 4.641396 TCACCTCCATCACAAACTTAGTG 58.359 43.478 0.00 0.00 38.32 2.74
1011 1097 1.250328 TCTCCCGACGCTTGAAGTTA 58.750 50.000 0.00 0.00 0.00 2.24
1174 1260 1.228337 TGAACCAGGAGACGTCGGA 60.228 57.895 10.46 0.00 0.00 4.55
1329 1415 3.444737 CTGGAGTAGCCGCCGTAT 58.555 61.111 0.00 0.00 40.66 3.06
1676 1765 6.266131 AGTTGATGAGGGGCAATTAGATTA 57.734 37.500 0.00 0.00 0.00 1.75
1685 1774 1.139498 TTGGGAGTTGATGAGGGGCA 61.139 55.000 0.00 0.00 0.00 5.36
1689 1778 0.394899 GGCCTTGGGAGTTGATGAGG 60.395 60.000 0.00 0.00 0.00 3.86
1715 1804 0.311165 ACTTCGAGGACTGACACACG 59.689 55.000 0.00 0.00 0.00 4.49
1758 1852 7.383843 CAGCGTTAAATTGGTTAATTTTGGACT 59.616 33.333 3.66 0.00 42.33 3.85
1772 1870 4.793216 GCCTATGTTGACAGCGTTAAATTG 59.207 41.667 0.00 0.00 0.00 2.32
1958 2061 6.535811 TCGTTGGTAAATAGCACGTTAATTG 58.464 36.000 0.00 0.00 32.83 2.32
1966 2072 4.694012 CGAGATCGTTGGTAAATAGCAC 57.306 45.455 0.00 0.00 32.83 4.40
1979 2085 0.960861 TGGAGACAGCACGAGATCGT 60.961 55.000 1.23 1.23 45.07 3.73
1990 2096 3.499918 GTTGTTGAACAGGATGGAGACAG 59.500 47.826 0.00 0.00 43.62 3.51
2086 2196 1.340889 GCAACTTGTTGGGCAGAATCA 59.659 47.619 14.30 0.00 0.00 2.57
2087 2197 1.666888 CGCAACTTGTTGGGCAGAATC 60.667 52.381 15.56 0.00 0.00 2.52
2088 2198 0.314935 CGCAACTTGTTGGGCAGAAT 59.685 50.000 15.56 0.00 0.00 2.40
2089 2199 1.732917 CGCAACTTGTTGGGCAGAA 59.267 52.632 15.56 0.00 0.00 3.02
2090 2200 2.192861 CCGCAACTTGTTGGGCAGA 61.193 57.895 20.40 0.00 34.05 4.26
2091 2201 2.336088 CCGCAACTTGTTGGGCAG 59.664 61.111 20.40 8.21 34.05 4.85
2092 2202 3.222855 CCCGCAACTTGTTGGGCA 61.223 61.111 20.40 0.00 34.25 5.36
2094 2204 3.989787 GGCCCGCAACTTGTTGGG 61.990 66.667 19.31 19.31 44.88 4.12
2095 2205 2.912025 AGGCCCGCAACTTGTTGG 60.912 61.111 14.30 5.58 0.00 3.77
2096 2206 1.733402 TTCAGGCCCGCAACTTGTTG 61.733 55.000 0.00 8.95 0.00 3.33
2097 2207 0.827507 ATTCAGGCCCGCAACTTGTT 60.828 50.000 0.00 0.00 0.00 2.83
2098 2208 1.228552 ATTCAGGCCCGCAACTTGT 60.229 52.632 0.00 0.00 0.00 3.16
2099 2209 1.508088 GATTCAGGCCCGCAACTTG 59.492 57.895 0.00 0.00 0.00 3.16
2100 2210 1.678970 GGATTCAGGCCCGCAACTT 60.679 57.895 0.00 0.00 0.00 2.66
2101 2211 2.044946 GGATTCAGGCCCGCAACT 60.045 61.111 0.00 0.00 0.00 3.16
2102 2212 2.044946 AGGATTCAGGCCCGCAAC 60.045 61.111 0.00 0.00 0.00 4.17
2138 2248 2.159085 GGCCTGAATACGACTAGCAACT 60.159 50.000 0.00 0.00 0.00 3.16
2142 2252 0.384669 ACGGCCTGAATACGACTAGC 59.615 55.000 0.00 0.00 0.00 3.42
2619 2821 9.274206 ACTAGAAAACTTTTATGGAACTCTGAC 57.726 33.333 0.00 0.00 0.00 3.51
2724 2931 4.148079 TGATACCATGCCAACTTTCAACA 58.852 39.130 0.00 0.00 0.00 3.33
2806 3013 5.781210 TTGTCCATTTTGCACATGAACTA 57.219 34.783 0.00 0.00 0.00 2.24
2808 3015 5.232463 AGATTGTCCATTTTGCACATGAAC 58.768 37.500 0.00 0.00 0.00 3.18
2812 3019 5.733620 AAGAGATTGTCCATTTTGCACAT 57.266 34.783 0.00 0.00 0.00 3.21
2849 3057 6.869913 TGTAACAGATTAGTTTTCGTCCGAAT 59.130 34.615 2.62 0.00 33.79 3.34
2992 3217 9.487442 TTCAGGGTTATTTAGCTCCAAAATATT 57.513 29.630 0.00 0.00 30.91 1.28
2995 3220 7.790782 TTTCAGGGTTATTTAGCTCCAAAAT 57.209 32.000 0.00 0.00 0.00 1.82
3010 3237 7.123355 TGAAGTGATTTTCAATTTCAGGGTT 57.877 32.000 0.00 0.00 34.57 4.11
3027 3254 6.603201 ACCTTTTCAGAGTTCATTTGAAGTGA 59.397 34.615 5.40 1.56 37.79 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.