Multiple sequence alignment - TraesCS2B01G081200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G081200 chr2B 100.000 4012 0 0 1 4012 45543119 45547130 0.000000e+00 7409.0
1 TraesCS2B01G081200 chr2B 96.665 1979 64 2 1 1977 44753993 44752015 0.000000e+00 3288.0
2 TraesCS2B01G081200 chr2B 89.899 1980 182 5 1 1977 45032388 45030424 0.000000e+00 2532.0
3 TraesCS2B01G081200 chr2B 91.521 1828 148 6 154 1977 45135922 45134098 0.000000e+00 2510.0
4 TraesCS2B01G081200 chr2B 90.647 1529 115 3 477 1977 45667348 45668876 0.000000e+00 2006.0
5 TraesCS2B01G081200 chr2B 88.982 835 46 18 2443 3231 44752027 44751193 0.000000e+00 990.0
6 TraesCS2B01G081200 chr2B 84.417 738 95 9 1238 1974 44926463 44927181 0.000000e+00 708.0
7 TraesCS2B01G081200 chr2B 83.312 773 89 21 2443 3177 45134110 45133340 0.000000e+00 676.0
8 TraesCS2B01G081200 chr2B 87.524 521 45 4 2443 2945 45668864 45669382 5.780000e-163 584.0
9 TraesCS2B01G081200 chr2B 88.344 489 52 5 3310 3797 44751197 44750713 2.080000e-162 582.0
10 TraesCS2B01G081200 chr2B 81.699 612 66 19 2443 3034 45030436 45029851 6.070000e-128 468.0
11 TraesCS2B01G081200 chr2B 87.469 399 40 7 3310 3705 45670033 45670424 6.110000e-123 451.0
12 TraesCS2B01G081200 chr2B 79.642 614 98 19 2443 3034 45616344 45615736 2.230000e-112 416.0
13 TraesCS2B01G081200 chr2B 78.889 630 93 22 2443 3034 45537059 45537686 1.350000e-104 390.0
14 TraesCS2B01G081200 chr2B 83.120 391 51 3 2659 3034 45038298 45037908 3.840000e-90 342.0
15 TraesCS2B01G081200 chr2B 86.061 330 15 5 2930 3231 45669711 45670037 3.870000e-85 326.0
16 TraesCS2B01G081200 chr2B 84.018 219 25 3 3311 3528 45029685 45029476 6.800000e-48 202.0
17 TraesCS2B01G081200 chr2B 92.135 89 7 0 3226 3314 492287789 492287877 4.210000e-25 126.0
18 TraesCS2B01G081200 chr2D 93.570 1975 126 1 1 1974 28001021 27999047 0.000000e+00 2942.0
19 TraesCS2B01G081200 chr2D 91.258 1979 171 2 1 1977 27957544 27959522 0.000000e+00 2695.0
20 TraesCS2B01G081200 chr2D 86.776 2004 233 22 1 1977 28094002 28092004 0.000000e+00 2204.0
21 TraesCS2B01G081200 chr2D 92.314 1184 85 4 687 1868 27977644 27976465 0.000000e+00 1677.0
22 TraesCS2B01G081200 chr2D 83.311 1498 222 13 484 1974 28417361 28415885 0.000000e+00 1356.0
23 TraesCS2B01G081200 chr2D 87.177 967 121 3 1 965 28008487 28007522 0.000000e+00 1096.0
24 TraesCS2B01G081200 chr2D 88.278 836 51 21 2443 3231 27999055 27998220 0.000000e+00 957.0
25 TraesCS2B01G081200 chr2D 87.070 611 59 4 2443 3034 27959510 27960119 0.000000e+00 673.0
26 TraesCS2B01G081200 chr2D 88.571 525 50 10 3464 3982 27969273 27968753 2.630000e-176 628.0
27 TraesCS2B01G081200 chr2D 87.755 441 52 2 1535 1974 28006886 28006447 7.690000e-142 514.0
28 TraesCS2B01G081200 chr2D 89.474 399 35 7 3311 3705 27998223 27997828 7.740000e-137 497.0
29 TraesCS2B01G081200 chr2D 79.542 611 104 8 2443 3034 28415893 28415285 2.230000e-112 416.0
30 TraesCS2B01G081200 chr2D 82.864 391 52 3 2659 3034 28006187 28005797 1.790000e-88 337.0
31 TraesCS2B01G081200 chr2D 86.047 301 42 0 5 305 28411742 28411442 1.390000e-84 324.0
32 TraesCS2B01G081200 chr2D 83.939 330 44 8 3310 3633 27960505 27960831 1.400000e-79 307.0
33 TraesCS2B01G081200 chr2D 81.682 333 47 7 3310 3641 27976054 27975735 8.550000e-67 265.0
34 TraesCS2B01G081200 chr2D 87.611 226 28 0 1749 1974 28075198 28075423 3.070000e-66 263.0
35 TraesCS2B01G081200 chr2D 81.875 160 25 3 2443 2599 28006455 28006297 9.050000e-27 132.0
36 TraesCS2B01G081200 chr2D 89.706 68 6 1 3728 3795 345830902 345830836 7.140000e-13 86.1
37 TraesCS2B01G081200 chr2A 92.593 1971 141 5 10 1977 30164164 30162196 0.000000e+00 2826.0
38 TraesCS2B01G081200 chr2A 86.148 1978 252 8 1 1974 30301709 30303668 0.000000e+00 2115.0
39 TraesCS2B01G081200 chr2A 85.043 1979 272 9 1 1974 30271370 30269411 0.000000e+00 1993.0
40 TraesCS2B01G081200 chr2A 84.899 1980 273 11 1 1974 30246120 30244161 0.000000e+00 1977.0
41 TraesCS2B01G081200 chr2A 84.856 1981 273 12 1 1974 30255723 30253763 0.000000e+00 1971.0
42 TraesCS2B01G081200 chr2A 87.755 833 57 26 2443 3231 30162208 30161377 0.000000e+00 931.0
43 TraesCS2B01G081200 chr2A 91.654 659 47 7 1317 1972 30180802 30181455 0.000000e+00 905.0
44 TraesCS2B01G081200 chr2A 87.970 399 36 8 3310 3705 30161381 30160992 1.020000e-125 460.0
45 TraesCS2B01G081200 chr2A 79.725 582 99 4 2443 3005 30303660 30304241 1.740000e-108 403.0
46 TraesCS2B01G081200 chr2A 83.887 391 48 6 2659 3034 30185029 30184639 3.810000e-95 359.0
47 TraesCS2B01G081200 chr2A 78.641 206 36 5 2443 2643 30185297 30185095 3.250000e-26 130.0
48 TraesCS2B01G081200 chr2A 88.732 71 7 1 3725 3795 457940924 457940993 7.140000e-13 86.1
49 TraesCS2B01G081200 chr7D 84.763 1982 272 15 1 1974 302744321 302746280 0.000000e+00 1960.0
50 TraesCS2B01G081200 chr7D 94.030 469 26 1 1978 2444 616553198 616552730 0.000000e+00 710.0
51 TraesCS2B01G081200 chr7D 92.111 469 30 4 1974 2442 567794718 567795179 0.000000e+00 654.0
52 TraesCS2B01G081200 chr7D 88.406 69 5 3 3728 3795 426151968 426152034 3.320000e-11 80.5
53 TraesCS2B01G081200 chr7A 92.766 470 29 5 1978 2445 696875303 696875769 0.000000e+00 675.0
54 TraesCS2B01G081200 chr7A 91.453 468 39 1 1978 2445 696944765 696945231 3.380000e-180 641.0
55 TraesCS2B01G081200 chr7A 83.256 215 31 5 3798 4010 708488281 708488070 4.090000e-45 193.0
56 TraesCS2B01G081200 chr4A 91.932 471 35 2 1978 2445 665957001 665956531 0.000000e+00 656.0
57 TraesCS2B01G081200 chr4A 91.737 472 34 4 1978 2446 697910489 697910020 0.000000e+00 651.0
58 TraesCS2B01G081200 chr4A 80.751 213 31 8 3799 4010 533441128 533441331 1.490000e-34 158.0
59 TraesCS2B01G081200 chr4A 87.500 104 10 3 3222 3323 179963130 179963028 2.530000e-22 117.0
60 TraesCS2B01G081200 chr1B 91.991 462 37 0 1978 2439 588152684 588152223 0.000000e+00 649.0
61 TraesCS2B01G081200 chr6B 91.974 461 37 0 1978 2438 30418914 30418454 0.000000e+00 647.0
62 TraesCS2B01G081200 chr3B 91.667 468 29 3 1977 2444 737149291 737148834 1.220000e-179 640.0
63 TraesCS2B01G081200 chr1D 86.730 211 22 5 3804 4010 55425426 55425634 3.120000e-56 230.0
64 TraesCS2B01G081200 chr4B 85.849 212 24 5 3801 4010 671179521 671179314 1.880000e-53 220.0
65 TraesCS2B01G081200 chr4B 83.256 215 29 7 3799 4009 369515150 369515361 1.470000e-44 191.0
66 TraesCS2B01G081200 chr4B 90.816 98 9 0 3227 3324 457410663 457410760 9.050000e-27 132.0
67 TraesCS2B01G081200 chr4B 89.691 97 9 1 3228 3323 413719573 413719669 5.450000e-24 122.0
68 TraesCS2B01G081200 chr5A 85.000 180 21 5 3833 4010 47976374 47976199 1.150000e-40 178.0
69 TraesCS2B01G081200 chr7B 83.429 175 24 5 3838 4010 104247518 104247347 1.490000e-34 158.0
70 TraesCS2B01G081200 chr5D 78.505 214 37 7 3798 4009 447504951 447505157 9.050000e-27 132.0
71 TraesCS2B01G081200 chr5D 93.103 87 6 0 3228 3314 481284606 481284520 1.170000e-25 128.0
72 TraesCS2B01G081200 chr4D 93.103 87 6 0 3228 3314 259809086 259809000 1.170000e-25 128.0
73 TraesCS2B01G081200 chr4D 93.103 87 6 0 3228 3314 259840300 259840214 1.170000e-25 128.0
74 TraesCS2B01G081200 chr4D 92.135 89 7 0 3226 3314 62309496 62309584 4.210000e-25 126.0
75 TraesCS2B01G081200 chr4D 89.109 101 11 0 3226 3326 182067425 182067325 4.210000e-25 126.0
76 TraesCS2B01G081200 chr5B 88.571 70 8 0 3726 3795 636609338 636609407 7.140000e-13 86.1
77 TraesCS2B01G081200 chr6D 88.406 69 8 0 3727 3795 134289079 134289011 2.570000e-12 84.2
78 TraesCS2B01G081200 chr6D 89.062 64 7 0 3732 3795 134694252 134694189 3.320000e-11 80.5
79 TraesCS2B01G081200 chr6A 88.571 70 7 1 3726 3795 175653690 175653622 2.570000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G081200 chr2B 45543119 45547130 4011 False 7409.000000 7409 100.000000 1 4012 1 chr2B.!!$F3 4011
1 TraesCS2B01G081200 chr2B 44750713 44753993 3280 True 1620.000000 3288 91.330333 1 3797 3 chr2B.!!$R3 3796
2 TraesCS2B01G081200 chr2B 45133340 45135922 2582 True 1593.000000 2510 87.416500 154 3177 2 chr2B.!!$R5 3023
3 TraesCS2B01G081200 chr2B 45029476 45032388 2912 True 1067.333333 2532 85.205333 1 3528 3 chr2B.!!$R4 3527
4 TraesCS2B01G081200 chr2B 45667348 45670424 3076 False 841.750000 2006 87.925250 477 3705 4 chr2B.!!$F5 3228
5 TraesCS2B01G081200 chr2B 44926463 44927181 718 False 708.000000 708 84.417000 1238 1974 1 chr2B.!!$F1 736
6 TraesCS2B01G081200 chr2B 45615736 45616344 608 True 416.000000 416 79.642000 2443 3034 1 chr2B.!!$R2 591
7 TraesCS2B01G081200 chr2B 45537059 45537686 627 False 390.000000 390 78.889000 2443 3034 1 chr2B.!!$F2 591
8 TraesCS2B01G081200 chr2D 28092004 28094002 1998 True 2204.000000 2204 86.776000 1 1977 1 chr2D.!!$R2 1976
9 TraesCS2B01G081200 chr2D 27997828 28001021 3193 True 1465.333333 2942 90.440667 1 3705 3 chr2D.!!$R5 3704
10 TraesCS2B01G081200 chr2D 27957544 27960831 3287 False 1225.000000 2695 87.422333 1 3633 3 chr2D.!!$F2 3632
11 TraesCS2B01G081200 chr2D 27975735 27977644 1909 True 971.000000 1677 86.998000 687 3641 2 chr2D.!!$R4 2954
12 TraesCS2B01G081200 chr2D 28411442 28417361 5919 True 698.666667 1356 82.966667 5 3034 3 chr2D.!!$R7 3029
13 TraesCS2B01G081200 chr2D 27968753 27969273 520 True 628.000000 628 88.571000 3464 3982 1 chr2D.!!$R1 518
14 TraesCS2B01G081200 chr2D 28005797 28008487 2690 True 519.750000 1096 84.917750 1 3034 4 chr2D.!!$R6 3033
15 TraesCS2B01G081200 chr2A 30269411 30271370 1959 True 1993.000000 1993 85.043000 1 1974 1 chr2A.!!$R3 1973
16 TraesCS2B01G081200 chr2A 30244161 30246120 1959 True 1977.000000 1977 84.899000 1 1974 1 chr2A.!!$R1 1973
17 TraesCS2B01G081200 chr2A 30253763 30255723 1960 True 1971.000000 1971 84.856000 1 1974 1 chr2A.!!$R2 1973
18 TraesCS2B01G081200 chr2A 30160992 30164164 3172 True 1405.666667 2826 89.439333 10 3705 3 chr2A.!!$R4 3695
19 TraesCS2B01G081200 chr2A 30301709 30304241 2532 False 1259.000000 2115 82.936500 1 3005 2 chr2A.!!$F3 3004
20 TraesCS2B01G081200 chr2A 30180802 30181455 653 False 905.000000 905 91.654000 1317 1972 1 chr2A.!!$F1 655
21 TraesCS2B01G081200 chr2A 30184639 30185297 658 True 244.500000 359 81.264000 2443 3034 2 chr2A.!!$R5 591
22 TraesCS2B01G081200 chr7D 302744321 302746280 1959 False 1960.000000 1960 84.763000 1 1974 1 chr7D.!!$F1 1973

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
994 1061 1.071434 TGGTGATGGTCCAACATCCA 58.929 50.0 9.74 12.84 45.16 3.41 F
1988 2171 0.182775 AAGCCGAGGAGTGTGGTTTT 59.817 50.0 0.00 0.00 0.00 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2378 2561 0.112995 TCAGCCCTCCAACATTGCTT 59.887 50.000 0.00 0.00 0.00 3.91 R
3825 7667 2.051423 GCGAGCCTAAACAAGTTTTGC 58.949 47.619 3.25 7.48 34.23 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 5.865085 TCTATATTGCTCGGCCAAAATAGT 58.135 37.500 2.24 0.00 0.00 2.12
125 126 6.072783 GCTTGAGCTTGATCTAAGTTTCAACT 60.073 38.462 14.81 0.00 37.28 3.16
273 275 3.085952 CCTAATCCTGGGAAGCAACAA 57.914 47.619 0.00 0.00 0.00 2.83
453 456 3.840078 TGGTCATTTCTCACATCTCTGGA 59.160 43.478 0.00 0.00 0.00 3.86
462 465 3.405831 TCACATCTCTGGAAAGTTGCAG 58.594 45.455 6.24 6.24 46.51 4.41
695 698 6.443527 TGGGAAGCTGCAATACCTATATATCA 59.556 38.462 1.02 0.00 0.00 2.15
795 799 5.932303 TCTTAGTGATAACAAGTTGACAGGC 59.068 40.000 10.54 0.00 0.00 4.85
890 894 4.989168 GTCAATACCAGTCGAACTCTTTGT 59.011 41.667 0.00 0.00 0.00 2.83
994 1061 1.071434 TGGTGATGGTCCAACATCCA 58.929 50.000 9.74 12.84 45.16 3.41
1377 1476 2.158900 TGCTTCCCTAGTCTTGCTATGC 60.159 50.000 0.00 0.00 0.00 3.14
1460 1603 9.185192 GTCCAAGAAGATGTTTCATTTTGTTAG 57.815 33.333 0.00 0.00 0.00 2.34
1657 1840 4.165779 GGTTGCCATCAAAGTATTCAACG 58.834 43.478 0.00 0.00 34.76 4.10
1961 2144 2.290896 TGACGCCTCCTTTGATCCATTT 60.291 45.455 0.00 0.00 0.00 2.32
1962 2145 2.356069 GACGCCTCCTTTGATCCATTTC 59.644 50.000 0.00 0.00 0.00 2.17
1974 2157 3.065233 TGATCCATTTCGATTTGAAGCCG 59.935 43.478 0.00 0.00 37.99 5.52
1977 2160 2.223340 CCATTTCGATTTGAAGCCGAGG 60.223 50.000 0.00 0.00 37.99 4.63
1978 2161 2.465860 TTTCGATTTGAAGCCGAGGA 57.534 45.000 0.00 0.00 37.99 3.71
1979 2162 2.010145 TTCGATTTGAAGCCGAGGAG 57.990 50.000 0.00 0.00 33.66 3.69
1980 2163 0.895530 TCGATTTGAAGCCGAGGAGT 59.104 50.000 0.00 0.00 0.00 3.85
1981 2164 1.002366 CGATTTGAAGCCGAGGAGTG 58.998 55.000 0.00 0.00 0.00 3.51
1982 2165 1.673033 CGATTTGAAGCCGAGGAGTGT 60.673 52.381 0.00 0.00 0.00 3.55
1983 2166 1.734465 GATTTGAAGCCGAGGAGTGTG 59.266 52.381 0.00 0.00 0.00 3.82
1984 2167 0.250295 TTTGAAGCCGAGGAGTGTGG 60.250 55.000 0.00 0.00 0.00 4.17
1985 2168 1.407656 TTGAAGCCGAGGAGTGTGGT 61.408 55.000 0.00 0.00 0.00 4.16
1986 2169 1.371558 GAAGCCGAGGAGTGTGGTT 59.628 57.895 0.00 0.00 0.00 3.67
1987 2170 0.250338 GAAGCCGAGGAGTGTGGTTT 60.250 55.000 0.00 0.00 0.00 3.27
1988 2171 0.182775 AAGCCGAGGAGTGTGGTTTT 59.817 50.000 0.00 0.00 0.00 2.43
1989 2172 0.535102 AGCCGAGGAGTGTGGTTTTG 60.535 55.000 0.00 0.00 0.00 2.44
1990 2173 0.818040 GCCGAGGAGTGTGGTTTTGT 60.818 55.000 0.00 0.00 0.00 2.83
1991 2174 0.944386 CCGAGGAGTGTGGTTTTGTG 59.056 55.000 0.00 0.00 0.00 3.33
1992 2175 1.663695 CGAGGAGTGTGGTTTTGTGT 58.336 50.000 0.00 0.00 0.00 3.72
1993 2176 2.484065 CCGAGGAGTGTGGTTTTGTGTA 60.484 50.000 0.00 0.00 0.00 2.90
1994 2177 2.800544 CGAGGAGTGTGGTTTTGTGTAG 59.199 50.000 0.00 0.00 0.00 2.74
1995 2178 2.548480 GAGGAGTGTGGTTTTGTGTAGC 59.452 50.000 0.00 0.00 0.00 3.58
1996 2179 2.172717 AGGAGTGTGGTTTTGTGTAGCT 59.827 45.455 0.00 0.00 0.00 3.32
1997 2180 2.548480 GGAGTGTGGTTTTGTGTAGCTC 59.452 50.000 0.00 0.00 0.00 4.09
1998 2181 2.210116 AGTGTGGTTTTGTGTAGCTCG 58.790 47.619 0.00 0.00 0.00 5.03
1999 2182 2.159014 AGTGTGGTTTTGTGTAGCTCGA 60.159 45.455 0.00 0.00 0.00 4.04
2000 2183 2.221055 GTGTGGTTTTGTGTAGCTCGAG 59.779 50.000 8.45 8.45 0.00 4.04
2001 2184 1.194772 GTGGTTTTGTGTAGCTCGAGC 59.805 52.381 30.01 30.01 42.49 5.03
2011 2194 4.686227 GCTCGAGCTACGTGGTAC 57.314 61.111 29.88 0.00 43.13 3.34
2012 2195 1.063811 GCTCGAGCTACGTGGTACC 59.936 63.158 29.88 4.43 43.13 3.34
2013 2196 1.726265 CTCGAGCTACGTGGTACCC 59.274 63.158 10.07 0.00 43.13 3.69
2014 2197 1.722636 CTCGAGCTACGTGGTACCCC 61.723 65.000 10.07 0.00 43.13 4.95
2015 2198 1.751927 CGAGCTACGTGGTACCCCT 60.752 63.158 10.07 0.00 37.22 4.79
2016 2199 1.318158 CGAGCTACGTGGTACCCCTT 61.318 60.000 10.07 0.00 37.22 3.95
2017 2200 1.767759 GAGCTACGTGGTACCCCTTA 58.232 55.000 10.07 0.00 0.00 2.69
2018 2201 2.314246 GAGCTACGTGGTACCCCTTAT 58.686 52.381 10.07 0.00 0.00 1.73
2019 2202 2.295629 GAGCTACGTGGTACCCCTTATC 59.704 54.545 10.07 0.00 0.00 1.75
2020 2203 2.091444 AGCTACGTGGTACCCCTTATCT 60.091 50.000 10.07 0.00 0.00 1.98
2021 2204 2.697229 GCTACGTGGTACCCCTTATCTT 59.303 50.000 10.07 0.00 0.00 2.40
2022 2205 3.891366 GCTACGTGGTACCCCTTATCTTA 59.109 47.826 10.07 0.00 0.00 2.10
2023 2206 4.022503 GCTACGTGGTACCCCTTATCTTAG 60.023 50.000 10.07 0.39 0.00 2.18
2024 2207 2.697229 ACGTGGTACCCCTTATCTTAGC 59.303 50.000 10.07 0.00 0.00 3.09
2025 2208 2.036862 CGTGGTACCCCTTATCTTAGCC 59.963 54.545 10.07 0.00 0.00 3.93
2026 2209 3.043418 GTGGTACCCCTTATCTTAGCCA 58.957 50.000 10.07 0.00 0.00 4.75
2027 2210 3.651423 GTGGTACCCCTTATCTTAGCCAT 59.349 47.826 10.07 0.00 0.00 4.40
2028 2211 3.908103 TGGTACCCCTTATCTTAGCCATC 59.092 47.826 10.07 0.00 0.00 3.51
2029 2212 3.263681 GGTACCCCTTATCTTAGCCATCC 59.736 52.174 0.00 0.00 0.00 3.51
2030 2213 3.074857 ACCCCTTATCTTAGCCATCCA 57.925 47.619 0.00 0.00 0.00 3.41
2031 2214 3.613559 ACCCCTTATCTTAGCCATCCAT 58.386 45.455 0.00 0.00 0.00 3.41
2032 2215 3.990245 ACCCCTTATCTTAGCCATCCATT 59.010 43.478 0.00 0.00 0.00 3.16
2033 2216 4.420214 ACCCCTTATCTTAGCCATCCATTT 59.580 41.667 0.00 0.00 0.00 2.32
2034 2217 5.103086 ACCCCTTATCTTAGCCATCCATTTT 60.103 40.000 0.00 0.00 0.00 1.82
2035 2218 5.840693 CCCCTTATCTTAGCCATCCATTTTT 59.159 40.000 0.00 0.00 0.00 1.94
2036 2219 6.239402 CCCCTTATCTTAGCCATCCATTTTTG 60.239 42.308 0.00 0.00 0.00 2.44
2037 2220 6.218746 CCTTATCTTAGCCATCCATTTTTGC 58.781 40.000 0.00 0.00 0.00 3.68
2038 2221 6.183360 CCTTATCTTAGCCATCCATTTTTGCA 60.183 38.462 0.00 0.00 0.00 4.08
2039 2222 5.881923 ATCTTAGCCATCCATTTTTGCAT 57.118 34.783 0.00 0.00 0.00 3.96
2040 2223 6.982160 ATCTTAGCCATCCATTTTTGCATA 57.018 33.333 0.00 0.00 0.00 3.14
2041 2224 6.395426 TCTTAGCCATCCATTTTTGCATAG 57.605 37.500 0.00 0.00 0.00 2.23
2042 2225 5.893255 TCTTAGCCATCCATTTTTGCATAGT 59.107 36.000 0.00 0.00 0.00 2.12
2043 2226 4.395959 AGCCATCCATTTTTGCATAGTG 57.604 40.909 0.00 0.00 0.00 2.74
2044 2227 4.025360 AGCCATCCATTTTTGCATAGTGA 58.975 39.130 0.00 0.00 0.00 3.41
2045 2228 4.652421 AGCCATCCATTTTTGCATAGTGAT 59.348 37.500 0.00 0.00 0.00 3.06
2046 2229 5.129815 AGCCATCCATTTTTGCATAGTGATT 59.870 36.000 0.00 0.00 0.00 2.57
2047 2230 5.464389 GCCATCCATTTTTGCATAGTGATTC 59.536 40.000 0.00 0.00 0.00 2.52
2048 2231 5.688621 CCATCCATTTTTGCATAGTGATTCG 59.311 40.000 0.00 0.00 0.00 3.34
2049 2232 5.895636 TCCATTTTTGCATAGTGATTCGT 57.104 34.783 0.00 0.00 0.00 3.85
2050 2233 5.639757 TCCATTTTTGCATAGTGATTCGTG 58.360 37.500 0.00 0.00 0.00 4.35
2051 2234 4.266029 CCATTTTTGCATAGTGATTCGTGC 59.734 41.667 0.00 0.00 38.05 5.34
2052 2235 4.495911 TTTTTGCATAGTGATTCGTGCA 57.504 36.364 0.00 0.00 44.97 4.57
2053 2236 3.745332 TTTGCATAGTGATTCGTGCAG 57.255 42.857 0.00 0.00 46.80 4.41
2054 2237 1.655484 TGCATAGTGATTCGTGCAGG 58.345 50.000 0.00 0.00 42.13 4.85
2055 2238 0.305922 GCATAGTGATTCGTGCAGGC 59.694 55.000 0.35 0.00 37.52 4.85
2056 2239 1.655484 CATAGTGATTCGTGCAGGCA 58.345 50.000 0.35 0.00 0.00 4.75
2057 2240 1.328680 CATAGTGATTCGTGCAGGCAC 59.671 52.381 14.20 14.20 43.01 5.01
2058 2241 0.320050 TAGTGATTCGTGCAGGCACA 59.680 50.000 22.69 6.08 46.47 4.57
2059 2242 0.321919 AGTGATTCGTGCAGGCACAT 60.322 50.000 22.69 10.61 46.47 3.21
2060 2243 0.523072 GTGATTCGTGCAGGCACATT 59.477 50.000 22.69 7.69 46.47 2.71
2061 2244 1.068333 GTGATTCGTGCAGGCACATTT 60.068 47.619 22.69 7.35 46.47 2.32
2062 2245 1.068402 TGATTCGTGCAGGCACATTTG 60.068 47.619 22.69 7.80 46.47 2.32
2063 2246 0.961019 ATTCGTGCAGGCACATTTGT 59.039 45.000 22.69 2.67 46.47 2.83
2064 2247 0.310543 TTCGTGCAGGCACATTTGTC 59.689 50.000 22.69 0.00 46.47 3.18
2065 2248 0.817229 TCGTGCAGGCACATTTGTCA 60.817 50.000 22.69 0.00 46.47 3.58
2066 2249 0.241749 CGTGCAGGCACATTTGTCAT 59.758 50.000 22.69 0.00 46.47 3.06
2067 2250 1.336148 CGTGCAGGCACATTTGTCATT 60.336 47.619 22.69 0.00 46.47 2.57
2068 2251 2.758009 GTGCAGGCACATTTGTCATTT 58.242 42.857 18.84 0.00 45.53 2.32
2069 2252 3.132925 GTGCAGGCACATTTGTCATTTT 58.867 40.909 18.84 0.00 45.53 1.82
2070 2253 3.560896 GTGCAGGCACATTTGTCATTTTT 59.439 39.130 18.84 0.00 45.53 1.94
2071 2254 3.560481 TGCAGGCACATTTGTCATTTTTG 59.440 39.130 0.00 0.00 0.00 2.44
2072 2255 3.560896 GCAGGCACATTTGTCATTTTTGT 59.439 39.130 0.00 0.00 0.00 2.83
2073 2256 4.035441 GCAGGCACATTTGTCATTTTTGTT 59.965 37.500 0.00 0.00 0.00 2.83
2074 2257 5.448904 GCAGGCACATTTGTCATTTTTGTTT 60.449 36.000 0.00 0.00 0.00 2.83
2075 2258 6.193761 CAGGCACATTTGTCATTTTTGTTTC 58.806 36.000 0.00 0.00 0.00 2.78
2076 2259 6.037391 CAGGCACATTTGTCATTTTTGTTTCT 59.963 34.615 0.00 0.00 0.00 2.52
2077 2260 6.258507 AGGCACATTTGTCATTTTTGTTTCTC 59.741 34.615 0.00 0.00 0.00 2.87
2078 2261 6.258507 GGCACATTTGTCATTTTTGTTTCTCT 59.741 34.615 0.00 0.00 0.00 3.10
2079 2262 7.339953 GCACATTTGTCATTTTTGTTTCTCTC 58.660 34.615 0.00 0.00 0.00 3.20
2080 2263 7.010367 GCACATTTGTCATTTTTGTTTCTCTCA 59.990 33.333 0.00 0.00 0.00 3.27
2081 2264 8.871862 CACATTTGTCATTTTTGTTTCTCTCAA 58.128 29.630 0.00 0.00 0.00 3.02
2082 2265 9.434420 ACATTTGTCATTTTTGTTTCTCTCAAA 57.566 25.926 0.00 0.00 33.76 2.69
2083 2266 9.693157 CATTTGTCATTTTTGTTTCTCTCAAAC 57.307 29.630 0.00 0.00 35.05 2.93
2084 2267 7.504922 TTGTCATTTTTGTTTCTCTCAAACG 57.495 32.000 0.00 0.00 35.05 3.60
2085 2268 6.847400 TGTCATTTTTGTTTCTCTCAAACGA 58.153 32.000 0.00 0.00 35.05 3.85
2086 2269 7.309177 TGTCATTTTTGTTTCTCTCAAACGAA 58.691 30.769 0.00 0.00 35.05 3.85
2087 2270 7.810282 TGTCATTTTTGTTTCTCTCAAACGAAA 59.190 29.630 8.06 8.06 40.07 3.46
2088 2271 8.102112 GTCATTTTTGTTTCTCTCAAACGAAAC 58.898 33.333 10.74 7.68 45.59 2.78
2100 2283 9.653287 TCTCTCAAACGAAACATCATATAAACT 57.347 29.630 0.00 0.00 0.00 2.66
2112 2295 9.979578 AACATCATATAAACTTCAAACTTTGCA 57.020 25.926 0.00 0.00 0.00 4.08
2113 2296 9.630098 ACATCATATAAACTTCAAACTTTGCAG 57.370 29.630 0.17 0.17 0.00 4.41
2114 2297 9.079833 CATCATATAAACTTCAAACTTTGCAGG 57.920 33.333 6.19 0.00 0.00 4.85
2115 2298 8.402798 TCATATAAACTTCAAACTTTGCAGGA 57.597 30.769 6.19 0.00 0.00 3.86
2116 2299 8.296713 TCATATAAACTTCAAACTTTGCAGGAC 58.703 33.333 6.19 0.00 0.00 3.85
2117 2300 4.799564 AAACTTCAAACTTTGCAGGACA 57.200 36.364 6.19 0.00 0.00 4.02
2118 2301 4.799564 AACTTCAAACTTTGCAGGACAA 57.200 36.364 6.19 0.00 36.13 3.18
2119 2302 4.110036 ACTTCAAACTTTGCAGGACAAC 57.890 40.909 6.19 0.00 38.23 3.32
2120 2303 3.509575 ACTTCAAACTTTGCAGGACAACA 59.490 39.130 6.19 0.00 38.23 3.33
2121 2304 4.021544 ACTTCAAACTTTGCAGGACAACAA 60.022 37.500 6.19 0.00 38.23 2.83
2122 2305 4.527509 TCAAACTTTGCAGGACAACAAA 57.472 36.364 0.00 0.00 38.23 2.83
2123 2306 4.887748 TCAAACTTTGCAGGACAACAAAA 58.112 34.783 0.00 0.00 38.23 2.44
2124 2307 4.688413 TCAAACTTTGCAGGACAACAAAAC 59.312 37.500 0.00 0.00 38.23 2.43
2125 2308 3.951775 ACTTTGCAGGACAACAAAACA 57.048 38.095 0.00 0.00 38.23 2.83
2126 2309 4.470334 ACTTTGCAGGACAACAAAACAT 57.530 36.364 0.00 0.00 38.23 2.71
2127 2310 4.831107 ACTTTGCAGGACAACAAAACATT 58.169 34.783 0.00 0.00 38.23 2.71
2128 2311 4.869861 ACTTTGCAGGACAACAAAACATTC 59.130 37.500 0.00 0.00 38.23 2.67
2129 2312 4.734398 TTGCAGGACAACAAAACATTCT 57.266 36.364 0.00 0.00 31.73 2.40
2130 2313 5.843673 TTGCAGGACAACAAAACATTCTA 57.156 34.783 0.00 0.00 31.73 2.10
2131 2314 5.843673 TGCAGGACAACAAAACATTCTAA 57.156 34.783 0.00 0.00 0.00 2.10
2132 2315 6.403866 TGCAGGACAACAAAACATTCTAAT 57.596 33.333 0.00 0.00 0.00 1.73
2133 2316 6.815089 TGCAGGACAACAAAACATTCTAATT 58.185 32.000 0.00 0.00 0.00 1.40
2134 2317 7.946207 TGCAGGACAACAAAACATTCTAATTA 58.054 30.769 0.00 0.00 0.00 1.40
2135 2318 7.865385 TGCAGGACAACAAAACATTCTAATTAC 59.135 33.333 0.00 0.00 0.00 1.89
2136 2319 8.082242 GCAGGACAACAAAACATTCTAATTACT 58.918 33.333 0.00 0.00 0.00 2.24
2144 2327 9.747898 ACAAAACATTCTAATTACTATGTGGGA 57.252 29.630 7.94 0.00 31.98 4.37
2234 2417 9.965824 CCTCATTTTGTATATTTATGTTGGTCC 57.034 33.333 0.00 0.00 0.00 4.46
2279 2462 9.747898 TTCCCACATAGTAATTAGAATGTTTGT 57.252 29.630 9.04 0.00 30.32 2.83
2280 2463 9.747898 TCCCACATAGTAATTAGAATGTTTGTT 57.252 29.630 9.04 0.00 30.32 2.83
2291 2474 8.868522 ATTAGAATGTTTGTTTGATCTGGAGA 57.131 30.769 0.00 0.00 0.00 3.71
2292 2475 6.814506 AGAATGTTTGTTTGATCTGGAGAG 57.185 37.500 0.00 0.00 0.00 3.20
2293 2476 6.302269 AGAATGTTTGTTTGATCTGGAGAGT 58.698 36.000 0.00 0.00 0.00 3.24
2294 2477 6.774656 AGAATGTTTGTTTGATCTGGAGAGTT 59.225 34.615 0.00 0.00 0.00 3.01
2295 2478 6.966534 ATGTTTGTTTGATCTGGAGAGTTT 57.033 33.333 0.00 0.00 0.00 2.66
2296 2479 6.135290 TGTTTGTTTGATCTGGAGAGTTTG 57.865 37.500 0.00 0.00 0.00 2.93
2297 2480 5.885352 TGTTTGTTTGATCTGGAGAGTTTGA 59.115 36.000 0.00 0.00 0.00 2.69
2298 2481 6.038603 TGTTTGTTTGATCTGGAGAGTTTGAG 59.961 38.462 0.00 0.00 0.00 3.02
2299 2482 4.645535 TGTTTGATCTGGAGAGTTTGAGG 58.354 43.478 0.00 0.00 0.00 3.86
2300 2483 4.103153 TGTTTGATCTGGAGAGTTTGAGGT 59.897 41.667 0.00 0.00 0.00 3.85
2301 2484 4.543590 TTGATCTGGAGAGTTTGAGGTC 57.456 45.455 0.00 0.00 0.00 3.85
2302 2485 3.784178 TGATCTGGAGAGTTTGAGGTCT 58.216 45.455 0.00 0.00 0.00 3.85
2303 2486 4.935578 TGATCTGGAGAGTTTGAGGTCTA 58.064 43.478 0.00 0.00 0.00 2.59
2304 2487 5.523588 TGATCTGGAGAGTTTGAGGTCTAT 58.476 41.667 0.00 0.00 0.00 1.98
2305 2488 6.673583 TGATCTGGAGAGTTTGAGGTCTATA 58.326 40.000 0.00 0.00 0.00 1.31
2306 2489 7.301420 TGATCTGGAGAGTTTGAGGTCTATAT 58.699 38.462 0.00 0.00 0.00 0.86
2307 2490 6.968263 TCTGGAGAGTTTGAGGTCTATATG 57.032 41.667 0.00 0.00 0.00 1.78
2308 2491 6.436027 TCTGGAGAGTTTGAGGTCTATATGT 58.564 40.000 0.00 0.00 0.00 2.29
2309 2492 6.897966 TCTGGAGAGTTTGAGGTCTATATGTT 59.102 38.462 0.00 0.00 0.00 2.71
2310 2493 7.068839 TCTGGAGAGTTTGAGGTCTATATGTTC 59.931 40.741 0.00 0.00 0.00 3.18
2311 2494 6.897966 TGGAGAGTTTGAGGTCTATATGTTCT 59.102 38.462 0.00 0.00 0.00 3.01
2312 2495 7.400339 TGGAGAGTTTGAGGTCTATATGTTCTT 59.600 37.037 0.00 0.00 0.00 2.52
2313 2496 8.261522 GGAGAGTTTGAGGTCTATATGTTCTTT 58.738 37.037 0.00 0.00 0.00 2.52
2314 2497 9.308318 GAGAGTTTGAGGTCTATATGTTCTTTC 57.692 37.037 0.00 0.00 0.00 2.62
2315 2498 8.816894 AGAGTTTGAGGTCTATATGTTCTTTCA 58.183 33.333 0.00 0.00 0.00 2.69
2316 2499 9.606631 GAGTTTGAGGTCTATATGTTCTTTCAT 57.393 33.333 0.00 0.00 0.00 2.57
2317 2500 9.965902 AGTTTGAGGTCTATATGTTCTTTCATT 57.034 29.630 0.00 0.00 0.00 2.57
2320 2503 9.958180 TTGAGGTCTATATGTTCTTTCATTTGA 57.042 29.630 0.00 0.00 0.00 2.69
2321 2504 9.605275 TGAGGTCTATATGTTCTTTCATTTGAG 57.395 33.333 0.00 0.00 0.00 3.02
2322 2505 9.823647 GAGGTCTATATGTTCTTTCATTTGAGA 57.176 33.333 0.00 0.00 0.00 3.27
2323 2506 9.829507 AGGTCTATATGTTCTTTCATTTGAGAG 57.170 33.333 0.00 0.00 0.00 3.20
2324 2507 9.823647 GGTCTATATGTTCTTTCATTTGAGAGA 57.176 33.333 0.00 0.00 34.04 3.10
2331 2514 9.874205 ATGTTCTTTCATTTGAGAGAAACAAAA 57.126 25.926 13.31 1.55 43.80 2.44
2332 2515 9.703892 TGTTCTTTCATTTGAGAGAAACAAAAA 57.296 25.926 13.31 0.00 43.80 1.94
2355 2538 8.457238 AAAAGAGAAATCTTCTTGCTGTAAGT 57.543 30.769 5.41 0.00 40.87 2.24
2356 2539 8.457238 AAAGAGAAATCTTCTTGCTGTAAGTT 57.543 30.769 5.41 0.00 40.87 2.66
2357 2540 9.561069 AAAGAGAAATCTTCTTGCTGTAAGTTA 57.439 29.630 5.41 0.00 40.87 2.24
2358 2541 8.770438 AGAGAAATCTTCTTGCTGTAAGTTAG 57.230 34.615 5.41 5.08 40.87 2.34
2359 2542 8.371699 AGAGAAATCTTCTTGCTGTAAGTTAGT 58.628 33.333 5.41 0.00 40.87 2.24
2360 2543 8.910351 AGAAATCTTCTTGCTGTAAGTTAGTT 57.090 30.769 5.41 0.00 36.36 2.24
2361 2544 8.778358 AGAAATCTTCTTGCTGTAAGTTAGTTG 58.222 33.333 5.41 0.00 36.36 3.16
2362 2545 8.677148 AAATCTTCTTGCTGTAAGTTAGTTGA 57.323 30.769 5.41 0.00 37.65 3.18
2363 2546 8.677148 AATCTTCTTGCTGTAAGTTAGTTGAA 57.323 30.769 5.41 0.00 37.65 2.69
2364 2547 7.715265 TCTTCTTGCTGTAAGTTAGTTGAAG 57.285 36.000 5.41 0.00 37.65 3.02
2365 2548 7.497595 TCTTCTTGCTGTAAGTTAGTTGAAGA 58.502 34.615 5.41 0.00 37.65 2.87
2366 2549 7.653713 TCTTCTTGCTGTAAGTTAGTTGAAGAG 59.346 37.037 5.41 0.00 37.65 2.85
2367 2550 6.817184 TCTTGCTGTAAGTTAGTTGAAGAGT 58.183 36.000 5.41 0.00 37.65 3.24
2368 2551 7.948357 TCTTGCTGTAAGTTAGTTGAAGAGTA 58.052 34.615 5.41 0.00 37.65 2.59
2369 2552 8.585881 TCTTGCTGTAAGTTAGTTGAAGAGTAT 58.414 33.333 5.41 0.00 37.65 2.12
2370 2553 8.534333 TTGCTGTAAGTTAGTTGAAGAGTATG 57.466 34.615 0.00 0.00 35.30 2.39
2371 2554 7.097192 TGCTGTAAGTTAGTTGAAGAGTATGG 58.903 38.462 0.00 0.00 35.30 2.74
2372 2555 7.039293 TGCTGTAAGTTAGTTGAAGAGTATGGA 60.039 37.037 0.00 0.00 35.30 3.41
2373 2556 7.982354 GCTGTAAGTTAGTTGAAGAGTATGGAT 59.018 37.037 0.00 0.00 35.30 3.41
2374 2557 9.522804 CTGTAAGTTAGTTGAAGAGTATGGATC 57.477 37.037 0.00 0.00 0.00 3.36
2375 2558 9.256228 TGTAAGTTAGTTGAAGAGTATGGATCT 57.744 33.333 0.00 0.00 0.00 2.75
2376 2559 9.738832 GTAAGTTAGTTGAAGAGTATGGATCTC 57.261 37.037 0.00 0.00 0.00 2.75
2377 2560 7.962995 AGTTAGTTGAAGAGTATGGATCTCA 57.037 36.000 0.00 0.00 34.73 3.27
2378 2561 8.367660 AGTTAGTTGAAGAGTATGGATCTCAA 57.632 34.615 0.00 0.00 34.73 3.02
2379 2562 8.816894 AGTTAGTTGAAGAGTATGGATCTCAAA 58.183 33.333 0.00 0.00 34.73 2.69
2380 2563 9.092876 GTTAGTTGAAGAGTATGGATCTCAAAG 57.907 37.037 0.00 0.00 34.73 2.77
2381 2564 6.112058 AGTTGAAGAGTATGGATCTCAAAGC 58.888 40.000 0.00 0.00 34.73 3.51
2382 2565 5.682234 TGAAGAGTATGGATCTCAAAGCA 57.318 39.130 0.00 0.00 34.73 3.91
2383 2566 6.053632 TGAAGAGTATGGATCTCAAAGCAA 57.946 37.500 0.00 0.00 34.73 3.91
2384 2567 6.656902 TGAAGAGTATGGATCTCAAAGCAAT 58.343 36.000 0.00 0.00 34.73 3.56
2385 2568 6.541278 TGAAGAGTATGGATCTCAAAGCAATG 59.459 38.462 0.00 0.00 34.73 2.82
2386 2569 5.999044 AGAGTATGGATCTCAAAGCAATGT 58.001 37.500 0.00 0.00 34.73 2.71
2387 2570 6.421485 AGAGTATGGATCTCAAAGCAATGTT 58.579 36.000 0.00 0.00 34.73 2.71
2388 2571 6.318144 AGAGTATGGATCTCAAAGCAATGTTG 59.682 38.462 0.00 0.00 34.73 3.33
2389 2572 4.730949 ATGGATCTCAAAGCAATGTTGG 57.269 40.909 0.00 0.00 0.00 3.77
2390 2573 3.765381 TGGATCTCAAAGCAATGTTGGA 58.235 40.909 0.00 0.00 0.00 3.53
2391 2574 3.760151 TGGATCTCAAAGCAATGTTGGAG 59.240 43.478 0.00 0.00 0.00 3.86
2392 2575 3.129988 GGATCTCAAAGCAATGTTGGAGG 59.870 47.826 0.00 0.00 0.00 4.30
2393 2576 2.517959 TCTCAAAGCAATGTTGGAGGG 58.482 47.619 0.00 0.00 0.00 4.30
2394 2577 0.968405 TCAAAGCAATGTTGGAGGGC 59.032 50.000 0.00 0.00 0.00 5.19
2395 2578 0.971386 CAAAGCAATGTTGGAGGGCT 59.029 50.000 0.00 0.00 36.13 5.19
2396 2579 0.971386 AAAGCAATGTTGGAGGGCTG 59.029 50.000 0.00 0.00 34.56 4.85
2397 2580 0.112995 AAGCAATGTTGGAGGGCTGA 59.887 50.000 0.00 0.00 34.56 4.26
2398 2581 0.112995 AGCAATGTTGGAGGGCTGAA 59.887 50.000 0.00 0.00 32.76 3.02
2399 2582 0.529378 GCAATGTTGGAGGGCTGAAG 59.471 55.000 0.00 0.00 0.00 3.02
2400 2583 1.887956 GCAATGTTGGAGGGCTGAAGA 60.888 52.381 0.00 0.00 0.00 2.87
2401 2584 2.731572 CAATGTTGGAGGGCTGAAGAT 58.268 47.619 0.00 0.00 0.00 2.40
2402 2585 3.889815 CAATGTTGGAGGGCTGAAGATA 58.110 45.455 0.00 0.00 0.00 1.98
2403 2586 4.272489 CAATGTTGGAGGGCTGAAGATAA 58.728 43.478 0.00 0.00 0.00 1.75
2404 2587 3.634397 TGTTGGAGGGCTGAAGATAAG 57.366 47.619 0.00 0.00 0.00 1.73
2405 2588 3.181329 TGTTGGAGGGCTGAAGATAAGA 58.819 45.455 0.00 0.00 0.00 2.10
2406 2589 3.198635 TGTTGGAGGGCTGAAGATAAGAG 59.801 47.826 0.00 0.00 0.00 2.85
2407 2590 2.402564 TGGAGGGCTGAAGATAAGAGG 58.597 52.381 0.00 0.00 0.00 3.69
2408 2591 2.293184 TGGAGGGCTGAAGATAAGAGGT 60.293 50.000 0.00 0.00 0.00 3.85
2409 2592 2.774809 GGAGGGCTGAAGATAAGAGGTT 59.225 50.000 0.00 0.00 0.00 3.50
2410 2593 3.201045 GGAGGGCTGAAGATAAGAGGTTT 59.799 47.826 0.00 0.00 0.00 3.27
2411 2594 4.447290 GAGGGCTGAAGATAAGAGGTTTC 58.553 47.826 0.00 0.00 0.00 2.78
2412 2595 3.846588 AGGGCTGAAGATAAGAGGTTTCA 59.153 43.478 0.00 0.00 0.00 2.69
2413 2596 4.476479 AGGGCTGAAGATAAGAGGTTTCAT 59.524 41.667 0.00 0.00 0.00 2.57
2414 2597 4.578105 GGGCTGAAGATAAGAGGTTTCATG 59.422 45.833 0.00 0.00 0.00 3.07
2415 2598 5.189180 GGCTGAAGATAAGAGGTTTCATGT 58.811 41.667 0.00 0.00 0.00 3.21
2416 2599 6.349300 GGCTGAAGATAAGAGGTTTCATGTA 58.651 40.000 0.00 0.00 0.00 2.29
2417 2600 6.481644 GGCTGAAGATAAGAGGTTTCATGTAG 59.518 42.308 0.00 0.00 0.00 2.74
2418 2601 6.018343 GCTGAAGATAAGAGGTTTCATGTAGC 60.018 42.308 0.00 0.00 0.00 3.58
2419 2602 6.349300 TGAAGATAAGAGGTTTCATGTAGCC 58.651 40.000 0.00 0.00 0.00 3.93
2420 2603 6.156949 TGAAGATAAGAGGTTTCATGTAGCCT 59.843 38.462 7.46 7.46 0.00 4.58
2421 2604 5.923204 AGATAAGAGGTTTCATGTAGCCTG 58.077 41.667 12.46 0.00 0.00 4.85
2422 2605 5.663106 AGATAAGAGGTTTCATGTAGCCTGA 59.337 40.000 12.46 0.00 0.00 3.86
2423 2606 3.902881 AGAGGTTTCATGTAGCCTGAG 57.097 47.619 12.46 0.00 0.00 3.35
2424 2607 2.093235 AGAGGTTTCATGTAGCCTGAGC 60.093 50.000 12.46 0.00 40.32 4.26
2436 2619 2.481289 GCCTGAGCTACAAAGGAACT 57.519 50.000 8.11 0.00 36.38 3.01
2437 2620 2.784347 GCCTGAGCTACAAAGGAACTT 58.216 47.619 8.11 0.00 44.29 2.66
2452 2635 4.145052 AGGAACTTTACCTTTGAAGCCAG 58.855 43.478 0.00 0.00 27.25 4.85
2463 2646 4.820716 CCTTTGAAGCCAGAGAATATCCTG 59.179 45.833 0.00 0.00 0.00 3.86
2502 2685 1.079127 ACGGCTCAGTGATTTCGGG 60.079 57.895 12.34 0.00 0.00 5.14
2521 2704 2.098443 GGGTCAGCAAAGTTTTTGTCGA 59.902 45.455 3.77 0.00 0.00 4.20
2604 2791 4.170256 GTGAGTTTTGCTTTTCCGTTTCA 58.830 39.130 0.00 0.00 0.00 2.69
2673 2938 1.270678 GGTTCTTTGCAGAGTACGGGT 60.271 52.381 3.90 0.00 0.00 5.28
2675 2940 3.555586 GGTTCTTTGCAGAGTACGGGTTA 60.556 47.826 3.90 0.00 0.00 2.85
2688 2953 2.726821 ACGGGTTAGGTTACGAGATCA 58.273 47.619 0.00 0.00 0.00 2.92
2748 3013 2.882137 CTGGAGTTGCTTACCGGAAAAA 59.118 45.455 9.46 0.00 32.36 1.94
2791 3056 2.196595 TGATGGACTTACCCTTCCCAG 58.803 52.381 0.00 0.00 38.00 4.45
2862 3144 2.229792 GTCATCAAGGGTGTGCAGAAA 58.770 47.619 0.00 0.00 0.00 2.52
2875 3157 2.030946 GTGCAGAAATATGGACGCAGAC 59.969 50.000 0.00 0.00 31.64 3.51
2907 3189 1.975407 CTGGTTGCTCTTGGGCTGG 60.975 63.158 0.00 0.00 0.00 4.85
3034 3659 9.671279 TTGATGAATATTTCTGCTCTGTTAGAA 57.329 29.630 0.00 0.00 0.00 2.10
3035 3660 9.671279 TGATGAATATTTCTGCTCTGTTAGAAA 57.329 29.630 0.00 0.00 44.32 2.52
3118 3968 6.670695 TTGAGGCTTGAGCACATAGATATA 57.329 37.500 5.24 0.00 44.36 0.86
3224 4079 2.787723 GCTGTGTGTATGGCGAAATTCG 60.788 50.000 11.47 11.47 43.89 3.34
3226 4081 2.158645 TGTGTGTATGGCGAAATTCGTG 59.841 45.455 17.05 0.00 42.81 4.35
3227 4082 2.158841 GTGTGTATGGCGAAATTCGTGT 59.841 45.455 17.05 5.98 42.81 4.49
3228 4083 3.368539 GTGTGTATGGCGAAATTCGTGTA 59.631 43.478 17.05 4.23 42.81 2.90
3229 4084 3.368539 TGTGTATGGCGAAATTCGTGTAC 59.631 43.478 17.05 15.70 42.81 2.90
3230 4085 3.615496 GTGTATGGCGAAATTCGTGTACT 59.385 43.478 17.05 1.02 42.81 2.73
3231 4086 3.861113 TGTATGGCGAAATTCGTGTACTC 59.139 43.478 17.05 0.00 42.81 2.59
3232 4087 1.717194 TGGCGAAATTCGTGTACTCC 58.283 50.000 17.05 8.68 42.81 3.85
3233 4088 1.004595 GGCGAAATTCGTGTACTCCC 58.995 55.000 17.05 3.85 42.81 4.30
3234 4089 1.405121 GGCGAAATTCGTGTACTCCCT 60.405 52.381 17.05 0.00 42.81 4.20
3235 4090 1.925185 GCGAAATTCGTGTACTCCCTC 59.075 52.381 17.05 0.00 42.81 4.30
3236 4091 2.416972 GCGAAATTCGTGTACTCCCTCT 60.417 50.000 17.05 0.00 42.81 3.69
3237 4092 3.179830 CGAAATTCGTGTACTCCCTCTG 58.820 50.000 7.29 0.00 34.72 3.35
3238 4093 3.367087 CGAAATTCGTGTACTCCCTCTGT 60.367 47.826 7.29 0.00 34.72 3.41
3239 4094 4.142534 CGAAATTCGTGTACTCCCTCTGTA 60.143 45.833 7.29 0.00 34.72 2.74
3240 4095 5.620654 CGAAATTCGTGTACTCCCTCTGTAA 60.621 44.000 7.29 0.00 34.72 2.41
3241 4096 5.733620 AATTCGTGTACTCCCTCTGTAAA 57.266 39.130 0.00 0.00 0.00 2.01
3242 4097 4.510038 TTCGTGTACTCCCTCTGTAAAC 57.490 45.455 0.00 0.00 0.00 2.01
3243 4098 3.759581 TCGTGTACTCCCTCTGTAAACT 58.240 45.455 0.00 0.00 0.00 2.66
3244 4099 4.910195 TCGTGTACTCCCTCTGTAAACTA 58.090 43.478 0.00 0.00 0.00 2.24
3245 4100 5.316167 TCGTGTACTCCCTCTGTAAACTAA 58.684 41.667 0.00 0.00 0.00 2.24
3246 4101 5.182001 TCGTGTACTCCCTCTGTAAACTAAC 59.818 44.000 0.00 0.00 0.00 2.34
3247 4102 5.048504 CGTGTACTCCCTCTGTAAACTAACA 60.049 44.000 0.00 0.00 0.00 2.41
3248 4103 6.155136 GTGTACTCCCTCTGTAAACTAACAC 58.845 44.000 0.00 0.00 0.00 3.32
3249 4104 5.834742 TGTACTCCCTCTGTAAACTAACACA 59.165 40.000 0.00 0.00 0.00 3.72
3250 4105 5.881923 ACTCCCTCTGTAAACTAACACAA 57.118 39.130 0.00 0.00 0.00 3.33
3251 4106 5.608449 ACTCCCTCTGTAAACTAACACAAC 58.392 41.667 0.00 0.00 0.00 3.32
3252 4107 5.129815 ACTCCCTCTGTAAACTAACACAACA 59.870 40.000 0.00 0.00 0.00 3.33
3253 4108 5.991861 TCCCTCTGTAAACTAACACAACAA 58.008 37.500 0.00 0.00 0.00 2.83
3254 4109 5.818857 TCCCTCTGTAAACTAACACAACAAC 59.181 40.000 0.00 0.00 0.00 3.32
3255 4110 5.587043 CCCTCTGTAAACTAACACAACAACA 59.413 40.000 0.00 0.00 0.00 3.33
3256 4111 6.262273 CCCTCTGTAAACTAACACAACAACAT 59.738 38.462 0.00 0.00 0.00 2.71
3257 4112 7.201785 CCCTCTGTAAACTAACACAACAACATT 60.202 37.037 0.00 0.00 0.00 2.71
3258 4113 8.188139 CCTCTGTAAACTAACACAACAACATTT 58.812 33.333 0.00 0.00 0.00 2.32
3265 4120 9.730420 AAACTAACACAACAACATTTAGATCAC 57.270 29.630 0.00 0.00 0.00 3.06
3266 4121 8.677148 ACTAACACAACAACATTTAGATCACT 57.323 30.769 0.00 0.00 0.00 3.41
3267 4122 9.772973 ACTAACACAACAACATTTAGATCACTA 57.227 29.630 0.00 0.00 0.00 2.74
3269 4124 8.677148 AACACAACAACATTTAGATCACTACT 57.323 30.769 0.00 0.00 0.00 2.57
3270 4125 8.677148 ACACAACAACATTTAGATCACTACTT 57.323 30.769 0.00 0.00 0.00 2.24
3271 4126 9.120538 ACACAACAACATTTAGATCACTACTTT 57.879 29.630 0.00 0.00 0.00 2.66
3349 4204 9.938280 TGTAAAGGGTACTGTATATATGAATGC 57.062 33.333 0.00 0.00 0.00 3.56
3514 4386 4.701765 CCTCAAAGAGGTATGACTGATGG 58.298 47.826 4.89 0.00 44.25 3.51
3548 4423 9.438291 CTGTATTAATAATGAAACCGAAAGCTG 57.562 33.333 0.00 0.00 0.00 4.24
3559 4435 5.674933 AACCGAAAGCTGTAAAAGAAGAG 57.325 39.130 0.00 0.00 0.00 2.85
3560 4436 4.704965 ACCGAAAGCTGTAAAAGAAGAGT 58.295 39.130 0.00 0.00 0.00 3.24
3564 4440 7.444487 ACCGAAAGCTGTAAAAGAAGAGTAAAT 59.556 33.333 0.00 0.00 0.00 1.40
3695 5656 3.211865 GGAAACAAAGAAAGGACGGACT 58.788 45.455 0.00 0.00 0.00 3.85
3712 5844 6.801862 GGACGGACTGAAAAGAAACAAATATG 59.198 38.462 0.00 0.00 0.00 1.78
3713 5845 6.677913 ACGGACTGAAAAGAAACAAATATGG 58.322 36.000 0.00 0.00 0.00 2.74
3766 7591 9.976255 TGAATGTATATAAACACGTTTTAGTGC 57.024 29.630 0.00 0.00 45.45 4.40
3785 7610 5.510671 AGTGCGTTTGTTCACTCATTTTAG 58.489 37.500 0.00 0.00 39.11 1.85
3818 7643 6.630203 TGGGTAAAACTGTGTCTACCATAT 57.370 37.500 12.57 0.00 36.34 1.78
3825 7667 3.181475 ACTGTGTCTACCATATCTTGCCG 60.181 47.826 0.00 0.00 0.00 5.69
3847 7689 3.058501 GCAAAACTTGTTTAGGCTCGCTA 60.059 43.478 12.45 0.00 0.00 4.26
3867 7709 7.888424 TCGCTAAGCTTTTAAGGGTTTAAAAT 58.112 30.769 3.20 0.00 43.85 1.82
3949 7792 5.360714 ACGAAGGGATTGTGAAAATATGCAT 59.639 36.000 3.79 3.79 0.00 3.96
3957 7800 8.277713 GGATTGTGAAAATATGCATTTATGTGC 58.722 33.333 3.54 0.00 45.25 4.57
3959 7802 6.876155 TGTGAAAATATGCATTTATGTGCCT 58.124 32.000 3.54 0.00 44.43 4.75
3960 7803 6.979817 TGTGAAAATATGCATTTATGTGCCTC 59.020 34.615 3.54 0.00 44.43 4.70
3961 7804 6.979817 GTGAAAATATGCATTTATGTGCCTCA 59.020 34.615 3.54 0.00 44.43 3.86
3996 7839 5.581126 AAAAACATTTCAGCTCACTGTGA 57.419 34.783 10.50 10.50 44.77 3.58
3997 7840 4.558538 AAACATTTCAGCTCACTGTGAC 57.441 40.909 6.36 4.48 44.77 3.67
3998 7841 2.498167 ACATTTCAGCTCACTGTGACC 58.502 47.619 6.36 0.03 44.77 4.02
3999 7842 2.105477 ACATTTCAGCTCACTGTGACCT 59.895 45.455 6.36 2.79 44.77 3.85
4000 7843 3.324846 ACATTTCAGCTCACTGTGACCTA 59.675 43.478 6.36 0.00 44.77 3.08
4003 7846 4.623932 TTCAGCTCACTGTGACCTAAAT 57.376 40.909 6.36 0.00 44.77 1.40
4005 7848 5.939764 TCAGCTCACTGTGACCTAAATAT 57.060 39.130 6.36 0.00 44.77 1.28
4006 7849 7.418337 TTCAGCTCACTGTGACCTAAATATA 57.582 36.000 6.36 0.00 44.77 0.86
4007 7850 7.603180 TCAGCTCACTGTGACCTAAATATAT 57.397 36.000 6.36 0.00 44.77 0.86
4008 7851 8.706322 TCAGCTCACTGTGACCTAAATATATA 57.294 34.615 6.36 0.00 44.77 0.86
4009 7852 8.577296 TCAGCTCACTGTGACCTAAATATATAC 58.423 37.037 6.36 0.00 44.77 1.47
4011 7854 6.807230 GCTCACTGTGACCTAAATATATACGG 59.193 42.308 6.36 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 5.406649 CGAGCAATATAGAAGTGAGGGATC 58.593 45.833 0.00 0.00 0.00 3.36
89 90 5.173774 TCAAGCTCAAGCAGTTTTGTAAG 57.826 39.130 4.59 0.00 45.16 2.34
203 204 4.743057 TGTGAGATGGTATCTGTCCAAG 57.257 45.455 0.00 0.00 40.38 3.61
273 275 2.771762 GGATCAGGCCCTCCAGCT 60.772 66.667 10.91 0.00 33.74 4.24
442 445 2.095364 GCTGCAACTTTCCAGAGATGTG 60.095 50.000 0.00 0.00 0.00 3.21
453 456 0.752743 TGTCAGCTGGCTGCAACTTT 60.753 50.000 20.86 0.00 45.94 2.66
795 799 7.926555 CACTGACCTAAACTACCAGGTATATTG 59.073 40.741 0.00 0.00 45.32 1.90
890 894 3.077391 ACCCAAGGAAAATGGAGGATTGA 59.923 43.478 0.00 0.00 40.56 2.57
994 1061 8.006298 TGAAACTTGTTTACTTCCATGTGAAT 57.994 30.769 0.00 0.00 31.06 2.57
1377 1476 0.606401 TCCAAAGAGCGGGCAGAAAG 60.606 55.000 0.00 0.00 0.00 2.62
1460 1603 4.791974 CACTTCTTTTCTCTTGTGATGGC 58.208 43.478 0.00 0.00 0.00 4.40
1657 1840 0.531200 CTCCCGGTAGGTTCACTCAC 59.469 60.000 0.00 0.00 36.75 3.51
1961 2144 0.895530 ACTCCTCGGCTTCAAATCGA 59.104 50.000 0.00 0.00 0.00 3.59
1962 2145 1.002366 CACTCCTCGGCTTCAAATCG 58.998 55.000 0.00 0.00 0.00 3.34
1974 2157 2.548480 GCTACACAAAACCACACTCCTC 59.452 50.000 0.00 0.00 0.00 3.71
1977 2160 2.221055 CGAGCTACACAAAACCACACTC 59.779 50.000 0.00 0.00 0.00 3.51
1978 2161 2.159014 TCGAGCTACACAAAACCACACT 60.159 45.455 0.00 0.00 0.00 3.55
1979 2162 2.206750 TCGAGCTACACAAAACCACAC 58.793 47.619 0.00 0.00 0.00 3.82
1980 2163 2.479837 CTCGAGCTACACAAAACCACA 58.520 47.619 0.00 0.00 0.00 4.17
1981 2164 1.194772 GCTCGAGCTACACAAAACCAC 59.805 52.381 29.88 0.00 38.21 4.16
1982 2165 1.508632 GCTCGAGCTACACAAAACCA 58.491 50.000 29.88 0.00 38.21 3.67
1994 2177 1.063811 GGTACCACGTAGCTCGAGC 59.936 63.158 30.01 30.01 42.86 5.03
2008 2191 3.908103 TGGATGGCTAAGATAAGGGGTAC 59.092 47.826 0.00 0.00 0.00 3.34
2009 2192 4.222333 TGGATGGCTAAGATAAGGGGTA 57.778 45.455 0.00 0.00 0.00 3.69
2010 2193 3.074857 TGGATGGCTAAGATAAGGGGT 57.925 47.619 0.00 0.00 0.00 4.95
2011 2194 4.664688 AATGGATGGCTAAGATAAGGGG 57.335 45.455 0.00 0.00 0.00 4.79
2012 2195 6.739565 GCAAAAATGGATGGCTAAGATAAGGG 60.740 42.308 0.00 0.00 0.00 3.95
2013 2196 6.183360 TGCAAAAATGGATGGCTAAGATAAGG 60.183 38.462 0.00 0.00 0.00 2.69
2014 2197 6.808829 TGCAAAAATGGATGGCTAAGATAAG 58.191 36.000 0.00 0.00 0.00 1.73
2015 2198 6.788598 TGCAAAAATGGATGGCTAAGATAA 57.211 33.333 0.00 0.00 0.00 1.75
2016 2199 6.982160 ATGCAAAAATGGATGGCTAAGATA 57.018 33.333 0.00 0.00 0.00 1.98
2017 2200 5.881923 ATGCAAAAATGGATGGCTAAGAT 57.118 34.783 0.00 0.00 0.00 2.40
2018 2201 5.893255 ACTATGCAAAAATGGATGGCTAAGA 59.107 36.000 0.00 0.00 0.00 2.10
2019 2202 5.981315 CACTATGCAAAAATGGATGGCTAAG 59.019 40.000 0.00 0.00 0.00 2.18
2020 2203 5.655974 TCACTATGCAAAAATGGATGGCTAA 59.344 36.000 0.00 0.00 0.00 3.09
2021 2204 5.199723 TCACTATGCAAAAATGGATGGCTA 58.800 37.500 0.00 0.00 0.00 3.93
2022 2205 4.025360 TCACTATGCAAAAATGGATGGCT 58.975 39.130 0.00 0.00 0.00 4.75
2023 2206 4.389890 TCACTATGCAAAAATGGATGGC 57.610 40.909 0.00 0.00 0.00 4.40
2024 2207 5.688621 CGAATCACTATGCAAAAATGGATGG 59.311 40.000 0.00 0.00 0.00 3.51
2025 2208 6.197655 CACGAATCACTATGCAAAAATGGATG 59.802 38.462 0.00 0.00 0.00 3.51
2026 2209 6.267817 CACGAATCACTATGCAAAAATGGAT 58.732 36.000 0.00 0.00 0.00 3.41
2027 2210 5.639757 CACGAATCACTATGCAAAAATGGA 58.360 37.500 0.00 0.00 0.00 3.41
2028 2211 4.266029 GCACGAATCACTATGCAAAAATGG 59.734 41.667 0.00 0.00 38.00 3.16
2029 2212 4.858140 TGCACGAATCACTATGCAAAAATG 59.142 37.500 0.00 0.00 44.72 2.32
2030 2213 5.058149 TGCACGAATCACTATGCAAAAAT 57.942 34.783 0.00 0.00 44.72 1.82
2031 2214 4.475028 CTGCACGAATCACTATGCAAAAA 58.525 39.130 0.00 0.00 46.75 1.94
2032 2215 3.119884 CCTGCACGAATCACTATGCAAAA 60.120 43.478 0.00 0.00 46.75 2.44
2033 2216 2.419673 CCTGCACGAATCACTATGCAAA 59.580 45.455 0.00 0.00 46.75 3.68
2034 2217 2.009051 CCTGCACGAATCACTATGCAA 58.991 47.619 0.00 0.00 46.75 4.08
2035 2218 1.655484 CCTGCACGAATCACTATGCA 58.345 50.000 0.00 0.00 45.45 3.96
2036 2219 0.305922 GCCTGCACGAATCACTATGC 59.694 55.000 0.00 0.00 38.59 3.14
2037 2220 1.328680 GTGCCTGCACGAATCACTATG 59.671 52.381 6.50 0.00 37.19 2.23
2038 2221 1.656652 GTGCCTGCACGAATCACTAT 58.343 50.000 6.50 0.00 37.19 2.12
2039 2222 3.137484 GTGCCTGCACGAATCACTA 57.863 52.632 6.50 0.00 37.19 2.74
2040 2223 3.972227 GTGCCTGCACGAATCACT 58.028 55.556 6.50 0.00 37.19 3.41
2048 2231 2.443887 AATGACAAATGTGCCTGCAC 57.556 45.000 15.15 15.15 46.33 4.57
2049 2232 3.472283 AAAATGACAAATGTGCCTGCA 57.528 38.095 0.00 0.00 0.00 4.41
2050 2233 3.560896 ACAAAAATGACAAATGTGCCTGC 59.439 39.130 0.00 0.00 0.00 4.85
2051 2234 5.738118 AACAAAAATGACAAATGTGCCTG 57.262 34.783 0.00 0.00 0.00 4.85
2052 2235 6.114767 AGAAACAAAAATGACAAATGTGCCT 58.885 32.000 0.00 0.00 0.00 4.75
2053 2236 6.258507 AGAGAAACAAAAATGACAAATGTGCC 59.741 34.615 0.00 0.00 0.00 5.01
2054 2237 7.010367 TGAGAGAAACAAAAATGACAAATGTGC 59.990 33.333 0.00 0.00 0.00 4.57
2055 2238 8.410030 TGAGAGAAACAAAAATGACAAATGTG 57.590 30.769 0.00 0.00 0.00 3.21
2056 2239 9.434420 TTTGAGAGAAACAAAAATGACAAATGT 57.566 25.926 0.00 0.00 34.89 2.71
2057 2240 9.693157 GTTTGAGAGAAACAAAAATGACAAATG 57.307 29.630 0.00 0.00 38.63 2.32
2058 2241 8.594687 CGTTTGAGAGAAACAAAAATGACAAAT 58.405 29.630 0.00 0.00 38.63 2.32
2059 2242 7.810282 TCGTTTGAGAGAAACAAAAATGACAAA 59.190 29.630 0.00 0.00 38.63 2.83
2060 2243 7.309177 TCGTTTGAGAGAAACAAAAATGACAA 58.691 30.769 0.00 0.00 38.63 3.18
2061 2244 6.847400 TCGTTTGAGAGAAACAAAAATGACA 58.153 32.000 0.00 0.00 38.63 3.58
2062 2245 7.734538 TTCGTTTGAGAGAAACAAAAATGAC 57.265 32.000 0.00 0.00 38.63 3.06
2074 2257 9.653287 AGTTTATATGATGTTTCGTTTGAGAGA 57.347 29.630 0.00 0.00 0.00 3.10
2086 2269 9.979578 TGCAAAGTTTGAAGTTTATATGATGTT 57.020 25.926 19.82 0.00 30.74 2.71
2087 2270 9.630098 CTGCAAAGTTTGAAGTTTATATGATGT 57.370 29.630 19.82 0.00 31.28 3.06
2088 2271 9.079833 CCTGCAAAGTTTGAAGTTTATATGATG 57.920 33.333 20.15 0.00 34.27 3.07
2089 2272 9.023962 TCCTGCAAAGTTTGAAGTTTATATGAT 57.976 29.630 20.15 0.00 34.27 2.45
2090 2273 8.296713 GTCCTGCAAAGTTTGAAGTTTATATGA 58.703 33.333 20.15 7.43 34.27 2.15
2091 2274 8.081633 TGTCCTGCAAAGTTTGAAGTTTATATG 58.918 33.333 20.15 5.37 34.27 1.78
2092 2275 8.177119 TGTCCTGCAAAGTTTGAAGTTTATAT 57.823 30.769 20.15 0.00 34.27 0.86
2093 2276 7.575414 TGTCCTGCAAAGTTTGAAGTTTATA 57.425 32.000 20.15 3.68 34.27 0.98
2094 2277 6.463995 TGTCCTGCAAAGTTTGAAGTTTAT 57.536 33.333 20.15 0.00 34.27 1.40
2095 2278 5.906113 TGTCCTGCAAAGTTTGAAGTTTA 57.094 34.783 20.15 4.94 34.27 2.01
2096 2279 4.799564 TGTCCTGCAAAGTTTGAAGTTT 57.200 36.364 20.15 0.00 34.27 2.66
2097 2280 4.021544 TGTTGTCCTGCAAAGTTTGAAGTT 60.022 37.500 20.15 0.00 39.03 2.66
2098 2281 3.509575 TGTTGTCCTGCAAAGTTTGAAGT 59.490 39.130 20.15 0.00 39.03 3.01
2099 2282 4.108699 TGTTGTCCTGCAAAGTTTGAAG 57.891 40.909 19.82 17.73 39.03 3.02
2100 2283 4.527509 TTGTTGTCCTGCAAAGTTTGAA 57.472 36.364 19.82 8.06 39.03 2.69
2101 2284 4.527509 TTTGTTGTCCTGCAAAGTTTGA 57.472 36.364 19.82 3.95 39.03 2.69
2102 2285 4.450419 TGTTTTGTTGTCCTGCAAAGTTTG 59.550 37.500 11.41 11.41 39.03 2.93
2103 2286 4.636249 TGTTTTGTTGTCCTGCAAAGTTT 58.364 34.783 0.00 0.00 39.03 2.66
2104 2287 4.264460 TGTTTTGTTGTCCTGCAAAGTT 57.736 36.364 0.00 0.00 39.03 2.66
2105 2288 3.951775 TGTTTTGTTGTCCTGCAAAGT 57.048 38.095 0.00 0.00 39.03 2.66
2106 2289 5.111293 AGAATGTTTTGTTGTCCTGCAAAG 58.889 37.500 0.00 0.00 39.03 2.77
2107 2290 5.083533 AGAATGTTTTGTTGTCCTGCAAA 57.916 34.783 0.00 0.00 39.03 3.68
2108 2291 4.734398 AGAATGTTTTGTTGTCCTGCAA 57.266 36.364 0.00 0.00 34.16 4.08
2109 2292 5.843673 TTAGAATGTTTTGTTGTCCTGCA 57.156 34.783 0.00 0.00 0.00 4.41
2110 2293 8.082242 AGTAATTAGAATGTTTTGTTGTCCTGC 58.918 33.333 0.00 0.00 0.00 4.85
2118 2301 9.747898 TCCCACATAGTAATTAGAATGTTTTGT 57.252 29.630 9.04 0.00 30.32 2.83
2208 2391 9.965824 GGACCAACATAAATATACAAAATGAGG 57.034 33.333 0.00 0.00 0.00 3.86
2253 2436 9.747898 ACAAACATTCTAATTACTATGTGGGAA 57.252 29.630 7.94 0.00 31.98 3.97
2254 2437 9.747898 AACAAACATTCTAATTACTATGTGGGA 57.252 29.630 7.94 0.00 31.98 4.37
2265 2448 9.300681 TCTCCAGATCAAACAAACATTCTAATT 57.699 29.630 0.00 0.00 0.00 1.40
2266 2449 8.868522 TCTCCAGATCAAACAAACATTCTAAT 57.131 30.769 0.00 0.00 0.00 1.73
2267 2450 7.939039 ACTCTCCAGATCAAACAAACATTCTAA 59.061 33.333 0.00 0.00 0.00 2.10
2268 2451 7.453393 ACTCTCCAGATCAAACAAACATTCTA 58.547 34.615 0.00 0.00 0.00 2.10
2269 2452 6.302269 ACTCTCCAGATCAAACAAACATTCT 58.698 36.000 0.00 0.00 0.00 2.40
2270 2453 6.566197 ACTCTCCAGATCAAACAAACATTC 57.434 37.500 0.00 0.00 0.00 2.67
2271 2454 6.966534 AACTCTCCAGATCAAACAAACATT 57.033 33.333 0.00 0.00 0.00 2.71
2272 2455 6.547141 TCAAACTCTCCAGATCAAACAAACAT 59.453 34.615 0.00 0.00 0.00 2.71
2273 2456 5.885352 TCAAACTCTCCAGATCAAACAAACA 59.115 36.000 0.00 0.00 0.00 2.83
2274 2457 6.377327 TCAAACTCTCCAGATCAAACAAAC 57.623 37.500 0.00 0.00 0.00 2.93
2275 2458 5.532406 CCTCAAACTCTCCAGATCAAACAAA 59.468 40.000 0.00 0.00 0.00 2.83
2276 2459 5.065914 CCTCAAACTCTCCAGATCAAACAA 58.934 41.667 0.00 0.00 0.00 2.83
2277 2460 4.103153 ACCTCAAACTCTCCAGATCAAACA 59.897 41.667 0.00 0.00 0.00 2.83
2278 2461 4.646572 ACCTCAAACTCTCCAGATCAAAC 58.353 43.478 0.00 0.00 0.00 2.93
2279 2462 4.594920 AGACCTCAAACTCTCCAGATCAAA 59.405 41.667 0.00 0.00 0.00 2.69
2280 2463 4.163427 AGACCTCAAACTCTCCAGATCAA 58.837 43.478 0.00 0.00 0.00 2.57
2281 2464 3.784178 AGACCTCAAACTCTCCAGATCA 58.216 45.455 0.00 0.00 0.00 2.92
2282 2465 7.232534 ACATATAGACCTCAAACTCTCCAGATC 59.767 40.741 0.00 0.00 0.00 2.75
2283 2466 7.072562 ACATATAGACCTCAAACTCTCCAGAT 58.927 38.462 0.00 0.00 0.00 2.90
2284 2467 6.436027 ACATATAGACCTCAAACTCTCCAGA 58.564 40.000 0.00 0.00 0.00 3.86
2285 2468 6.723298 ACATATAGACCTCAAACTCTCCAG 57.277 41.667 0.00 0.00 0.00 3.86
2286 2469 6.897966 AGAACATATAGACCTCAAACTCTCCA 59.102 38.462 0.00 0.00 0.00 3.86
2287 2470 7.354751 AGAACATATAGACCTCAAACTCTCC 57.645 40.000 0.00 0.00 0.00 3.71
2288 2471 9.308318 GAAAGAACATATAGACCTCAAACTCTC 57.692 37.037 0.00 0.00 0.00 3.20
2289 2472 8.816894 TGAAAGAACATATAGACCTCAAACTCT 58.183 33.333 0.00 0.00 0.00 3.24
2290 2473 9.606631 ATGAAAGAACATATAGACCTCAAACTC 57.393 33.333 0.00 0.00 0.00 3.01
2291 2474 9.965902 AATGAAAGAACATATAGACCTCAAACT 57.034 29.630 0.00 0.00 0.00 2.66
2294 2477 9.958180 TCAAATGAAAGAACATATAGACCTCAA 57.042 29.630 0.00 0.00 0.00 3.02
2295 2478 9.605275 CTCAAATGAAAGAACATATAGACCTCA 57.395 33.333 0.00 0.00 0.00 3.86
2296 2479 9.823647 TCTCAAATGAAAGAACATATAGACCTC 57.176 33.333 0.00 0.00 0.00 3.85
2297 2480 9.829507 CTCTCAAATGAAAGAACATATAGACCT 57.170 33.333 0.00 0.00 0.00 3.85
2298 2481 9.823647 TCTCTCAAATGAAAGAACATATAGACC 57.176 33.333 0.00 0.00 0.00 3.85
2305 2488 9.874205 TTTTGTTTCTCTCAAATGAAAGAACAT 57.126 25.926 0.00 0.00 35.94 2.71
2306 2489 9.703892 TTTTTGTTTCTCTCAAATGAAAGAACA 57.296 25.926 0.00 0.00 35.94 3.18
2329 2512 8.907885 ACTTACAGCAAGAAGATTTCTCTTTTT 58.092 29.630 0.00 0.00 41.87 1.94
2330 2513 8.457238 ACTTACAGCAAGAAGATTTCTCTTTT 57.543 30.769 0.00 0.00 41.87 2.27
2331 2514 8.457238 AACTTACAGCAAGAAGATTTCTCTTT 57.543 30.769 0.00 0.00 41.87 2.52
2332 2515 9.213799 CTAACTTACAGCAAGAAGATTTCTCTT 57.786 33.333 0.00 0.00 44.53 2.85
2333 2516 8.371699 ACTAACTTACAGCAAGAAGATTTCTCT 58.628 33.333 0.00 0.00 39.61 3.10
2334 2517 8.541133 ACTAACTTACAGCAAGAAGATTTCTC 57.459 34.615 0.00 0.00 39.61 2.87
2335 2518 8.778358 CAACTAACTTACAGCAAGAAGATTTCT 58.222 33.333 0.00 0.00 43.15 2.52
2336 2519 8.774586 TCAACTAACTTACAGCAAGAAGATTTC 58.225 33.333 0.00 0.00 37.71 2.17
2337 2520 8.677148 TCAACTAACTTACAGCAAGAAGATTT 57.323 30.769 0.00 0.00 37.71 2.17
2338 2521 8.677148 TTCAACTAACTTACAGCAAGAAGATT 57.323 30.769 0.00 0.00 37.71 2.40
2339 2522 8.150945 TCTTCAACTAACTTACAGCAAGAAGAT 58.849 33.333 0.00 0.00 37.71 2.40
2340 2523 7.497595 TCTTCAACTAACTTACAGCAAGAAGA 58.502 34.615 0.00 0.00 37.71 2.87
2341 2524 7.439655 ACTCTTCAACTAACTTACAGCAAGAAG 59.560 37.037 0.00 0.00 37.71 2.85
2342 2525 7.272978 ACTCTTCAACTAACTTACAGCAAGAA 58.727 34.615 0.00 0.00 37.71 2.52
2343 2526 6.817184 ACTCTTCAACTAACTTACAGCAAGA 58.183 36.000 0.00 0.00 37.71 3.02
2344 2527 8.651588 CATACTCTTCAACTAACTTACAGCAAG 58.348 37.037 0.00 0.00 40.38 4.01
2345 2528 7.602644 CCATACTCTTCAACTAACTTACAGCAA 59.397 37.037 0.00 0.00 0.00 3.91
2346 2529 7.039293 TCCATACTCTTCAACTAACTTACAGCA 60.039 37.037 0.00 0.00 0.00 4.41
2347 2530 7.321153 TCCATACTCTTCAACTAACTTACAGC 58.679 38.462 0.00 0.00 0.00 4.40
2348 2531 9.522804 GATCCATACTCTTCAACTAACTTACAG 57.477 37.037 0.00 0.00 0.00 2.74
2349 2532 9.256228 AGATCCATACTCTTCAACTAACTTACA 57.744 33.333 0.00 0.00 0.00 2.41
2350 2533 9.738832 GAGATCCATACTCTTCAACTAACTTAC 57.261 37.037 0.00 0.00 0.00 2.34
2351 2534 9.475620 TGAGATCCATACTCTTCAACTAACTTA 57.524 33.333 0.00 0.00 35.66 2.24
2352 2535 8.367660 TGAGATCCATACTCTTCAACTAACTT 57.632 34.615 0.00 0.00 35.66 2.66
2353 2536 7.962995 TGAGATCCATACTCTTCAACTAACT 57.037 36.000 0.00 0.00 35.66 2.24
2354 2537 9.092876 CTTTGAGATCCATACTCTTCAACTAAC 57.907 37.037 0.00 0.00 35.66 2.34
2355 2538 7.766278 GCTTTGAGATCCATACTCTTCAACTAA 59.234 37.037 0.00 0.00 35.66 2.24
2356 2539 7.093333 TGCTTTGAGATCCATACTCTTCAACTA 60.093 37.037 0.00 0.00 35.66 2.24
2357 2540 6.112058 GCTTTGAGATCCATACTCTTCAACT 58.888 40.000 0.00 0.00 35.66 3.16
2358 2541 5.877012 TGCTTTGAGATCCATACTCTTCAAC 59.123 40.000 0.00 0.00 35.66 3.18
2359 2542 6.053632 TGCTTTGAGATCCATACTCTTCAA 57.946 37.500 0.00 0.00 35.66 2.69
2360 2543 5.682234 TGCTTTGAGATCCATACTCTTCA 57.318 39.130 0.00 0.00 35.66 3.02
2361 2544 6.541641 ACATTGCTTTGAGATCCATACTCTTC 59.458 38.462 0.00 0.00 35.66 2.87
2362 2545 6.421485 ACATTGCTTTGAGATCCATACTCTT 58.579 36.000 0.00 0.00 35.66 2.85
2363 2546 5.999044 ACATTGCTTTGAGATCCATACTCT 58.001 37.500 0.00 0.00 35.66 3.24
2364 2547 6.459298 CCAACATTGCTTTGAGATCCATACTC 60.459 42.308 0.00 0.00 35.26 2.59
2365 2548 5.359009 CCAACATTGCTTTGAGATCCATACT 59.641 40.000 0.00 0.00 0.00 2.12
2366 2549 5.357878 TCCAACATTGCTTTGAGATCCATAC 59.642 40.000 0.00 0.00 0.00 2.39
2367 2550 5.508567 TCCAACATTGCTTTGAGATCCATA 58.491 37.500 0.00 0.00 0.00 2.74
2368 2551 4.346730 TCCAACATTGCTTTGAGATCCAT 58.653 39.130 0.00 0.00 0.00 3.41
2369 2552 3.760151 CTCCAACATTGCTTTGAGATCCA 59.240 43.478 0.00 0.00 0.00 3.41
2370 2553 3.129988 CCTCCAACATTGCTTTGAGATCC 59.870 47.826 0.00 0.00 0.00 3.36
2371 2554 3.129988 CCCTCCAACATTGCTTTGAGATC 59.870 47.826 0.00 0.00 0.00 2.75
2372 2555 3.094572 CCCTCCAACATTGCTTTGAGAT 58.905 45.455 0.00 0.00 0.00 2.75
2373 2556 2.517959 CCCTCCAACATTGCTTTGAGA 58.482 47.619 0.00 0.00 0.00 3.27
2374 2557 1.067354 GCCCTCCAACATTGCTTTGAG 60.067 52.381 0.00 0.00 0.00 3.02
2375 2558 0.968405 GCCCTCCAACATTGCTTTGA 59.032 50.000 0.00 0.00 0.00 2.69
2376 2559 0.971386 AGCCCTCCAACATTGCTTTG 59.029 50.000 0.00 0.00 0.00 2.77
2377 2560 0.971386 CAGCCCTCCAACATTGCTTT 59.029 50.000 0.00 0.00 0.00 3.51
2378 2561 0.112995 TCAGCCCTCCAACATTGCTT 59.887 50.000 0.00 0.00 0.00 3.91
2379 2562 0.112995 TTCAGCCCTCCAACATTGCT 59.887 50.000 0.00 0.00 0.00 3.91
2380 2563 0.529378 CTTCAGCCCTCCAACATTGC 59.471 55.000 0.00 0.00 0.00 3.56
2381 2564 2.205022 TCTTCAGCCCTCCAACATTG 57.795 50.000 0.00 0.00 0.00 2.82
2382 2565 4.228210 TCTTATCTTCAGCCCTCCAACATT 59.772 41.667 0.00 0.00 0.00 2.71
2383 2566 3.782523 TCTTATCTTCAGCCCTCCAACAT 59.217 43.478 0.00 0.00 0.00 2.71
2384 2567 3.181329 TCTTATCTTCAGCCCTCCAACA 58.819 45.455 0.00 0.00 0.00 3.33
2385 2568 3.432890 CCTCTTATCTTCAGCCCTCCAAC 60.433 52.174 0.00 0.00 0.00 3.77
2386 2569 2.774234 CCTCTTATCTTCAGCCCTCCAA 59.226 50.000 0.00 0.00 0.00 3.53
2387 2570 2.293184 ACCTCTTATCTTCAGCCCTCCA 60.293 50.000 0.00 0.00 0.00 3.86
2388 2571 2.403561 ACCTCTTATCTTCAGCCCTCC 58.596 52.381 0.00 0.00 0.00 4.30
2389 2572 4.080863 TGAAACCTCTTATCTTCAGCCCTC 60.081 45.833 0.00 0.00 0.00 4.30
2390 2573 3.846588 TGAAACCTCTTATCTTCAGCCCT 59.153 43.478 0.00 0.00 0.00 5.19
2391 2574 4.222124 TGAAACCTCTTATCTTCAGCCC 57.778 45.455 0.00 0.00 0.00 5.19
2392 2575 5.189180 ACATGAAACCTCTTATCTTCAGCC 58.811 41.667 0.00 0.00 31.70 4.85
2393 2576 6.018343 GCTACATGAAACCTCTTATCTTCAGC 60.018 42.308 0.00 0.00 31.70 4.26
2394 2577 6.481644 GGCTACATGAAACCTCTTATCTTCAG 59.518 42.308 0.00 0.00 31.70 3.02
2395 2578 6.156949 AGGCTACATGAAACCTCTTATCTTCA 59.843 38.462 0.00 0.00 32.67 3.02
2396 2579 6.481644 CAGGCTACATGAAACCTCTTATCTTC 59.518 42.308 0.00 0.00 0.00 2.87
2397 2580 6.156949 TCAGGCTACATGAAACCTCTTATCTT 59.843 38.462 0.00 0.00 0.00 2.40
2398 2581 5.663106 TCAGGCTACATGAAACCTCTTATCT 59.337 40.000 0.00 0.00 0.00 1.98
2399 2582 5.918608 TCAGGCTACATGAAACCTCTTATC 58.081 41.667 0.00 0.00 0.00 1.75
2400 2583 5.686124 GCTCAGGCTACATGAAACCTCTTAT 60.686 44.000 0.00 0.00 35.22 1.73
2401 2584 4.383118 GCTCAGGCTACATGAAACCTCTTA 60.383 45.833 0.00 0.00 35.22 2.10
2402 2585 3.620966 GCTCAGGCTACATGAAACCTCTT 60.621 47.826 0.00 0.00 35.22 2.85
2403 2586 2.093235 GCTCAGGCTACATGAAACCTCT 60.093 50.000 0.00 0.00 35.22 3.69
2404 2587 2.284190 GCTCAGGCTACATGAAACCTC 58.716 52.381 0.00 0.00 35.22 3.85
2405 2588 2.409948 GCTCAGGCTACATGAAACCT 57.590 50.000 0.00 0.00 35.22 3.50
2415 2598 4.041691 AAAGTTCCTTTGTAGCTCAGGCTA 59.958 41.667 0.00 0.00 39.78 3.93
2416 2599 3.181439 AAAGTTCCTTTGTAGCTCAGGCT 60.181 43.478 0.00 0.00 41.04 4.58
2417 2600 2.481289 AGTTCCTTTGTAGCTCAGGC 57.519 50.000 0.00 0.00 39.06 4.85
2418 2601 4.695928 GGTAAAGTTCCTTTGTAGCTCAGG 59.304 45.833 0.00 0.00 35.21 3.86
2419 2602 5.552178 AGGTAAAGTTCCTTTGTAGCTCAG 58.448 41.667 0.00 0.00 35.21 3.35
2420 2603 5.562298 AGGTAAAGTTCCTTTGTAGCTCA 57.438 39.130 0.00 0.00 35.21 4.26
2429 2612 4.542697 TGGCTTCAAAGGTAAAGTTCCTT 58.457 39.130 0.00 0.00 45.84 3.36
2430 2613 4.141251 TCTGGCTTCAAAGGTAAAGTTCCT 60.141 41.667 0.00 0.00 36.81 3.36
2431 2614 4.142038 TCTGGCTTCAAAGGTAAAGTTCC 58.858 43.478 0.00 0.00 0.00 3.62
2432 2615 5.063880 TCTCTGGCTTCAAAGGTAAAGTTC 58.936 41.667 0.00 0.00 0.00 3.01
2433 2616 5.048846 TCTCTGGCTTCAAAGGTAAAGTT 57.951 39.130 0.00 0.00 0.00 2.66
2434 2617 4.706842 TCTCTGGCTTCAAAGGTAAAGT 57.293 40.909 0.00 0.00 0.00 2.66
2435 2618 7.012799 GGATATTCTCTGGCTTCAAAGGTAAAG 59.987 40.741 0.00 0.00 0.00 1.85
2436 2619 6.828785 GGATATTCTCTGGCTTCAAAGGTAAA 59.171 38.462 0.00 0.00 0.00 2.01
2437 2620 6.158695 AGGATATTCTCTGGCTTCAAAGGTAA 59.841 38.462 0.00 0.00 0.00 2.85
2438 2621 5.667626 AGGATATTCTCTGGCTTCAAAGGTA 59.332 40.000 0.00 0.00 0.00 3.08
2439 2622 4.476479 AGGATATTCTCTGGCTTCAAAGGT 59.524 41.667 0.00 0.00 0.00 3.50
2440 2623 4.820716 CAGGATATTCTCTGGCTTCAAAGG 59.179 45.833 0.00 0.00 0.00 3.11
2441 2624 5.435291 ACAGGATATTCTCTGGCTTCAAAG 58.565 41.667 0.00 0.00 35.47 2.77
2452 2635 4.985409 GTCATCGTCCAACAGGATATTCTC 59.015 45.833 0.00 0.00 33.13 2.87
2463 2646 1.394917 GCAGTCATGTCATCGTCCAAC 59.605 52.381 0.00 0.00 0.00 3.77
2502 2685 6.636850 ACATATTCGACAAAAACTTTGCTGAC 59.363 34.615 0.00 0.00 0.00 3.51
2521 2704 9.660544 ATCCAGGCTTTTAGGAATAAACATATT 57.339 29.630 0.00 0.00 34.62 1.28
2577 2763 1.679153 GAAAAGCAAAACTCACCGGGA 59.321 47.619 6.32 0.00 0.00 5.14
2673 2938 3.879295 CCTACGGTGATCTCGTAACCTAA 59.121 47.826 17.64 3.08 41.62 2.69
2675 2940 2.092753 TCCTACGGTGATCTCGTAACCT 60.093 50.000 17.64 1.77 41.62 3.50
2688 2953 4.833380 ACTATATGCATCAACTCCTACGGT 59.167 41.667 0.19 0.00 0.00 4.83
2698 2963 5.887598 AGCACTCCAAAACTATATGCATCAA 59.112 36.000 0.19 0.00 34.03 2.57
2748 3013 4.843728 ACAAACATATCATCGGTTGGTCT 58.156 39.130 0.00 0.00 0.00 3.85
2791 3056 5.707298 TCAGGAAACATGGATTCAGAGAAAC 59.293 40.000 13.46 0.00 0.00 2.78
2862 3144 7.265673 GGTACAATATATGTCTGCGTCCATAT 58.734 38.462 0.00 6.92 42.70 1.78
2875 3157 4.985538 AGCAACCAGGGGTACAATATATG 58.014 43.478 0.00 0.00 33.12 1.78
2907 3189 3.266510 TGGAGATTCCACAGTACATGC 57.733 47.619 0.00 0.00 42.67 4.06
3034 3659 9.841295 TGAAATGAACTTTACCTGTTACTACTT 57.159 29.630 0.00 0.00 0.00 2.24
3045 3700 7.827729 ACAGGGTACTATGAAATGAACTTTACC 59.172 37.037 5.10 0.00 0.00 2.85
3224 4079 6.155136 GTGTTAGTTTACAGAGGGAGTACAC 58.845 44.000 0.00 0.00 0.00 2.90
3226 4081 6.336842 TGTGTTAGTTTACAGAGGGAGTAC 57.663 41.667 0.00 0.00 0.00 2.73
3227 4082 6.324512 TGTTGTGTTAGTTTACAGAGGGAGTA 59.675 38.462 0.00 0.00 0.00 2.59
3228 4083 5.129815 TGTTGTGTTAGTTTACAGAGGGAGT 59.870 40.000 0.00 0.00 0.00 3.85
3229 4084 5.607477 TGTTGTGTTAGTTTACAGAGGGAG 58.393 41.667 0.00 0.00 0.00 4.30
3230 4085 5.617528 TGTTGTGTTAGTTTACAGAGGGA 57.382 39.130 0.00 0.00 0.00 4.20
3231 4086 5.587043 TGTTGTTGTGTTAGTTTACAGAGGG 59.413 40.000 0.00 0.00 0.00 4.30
3232 4087 6.671614 TGTTGTTGTGTTAGTTTACAGAGG 57.328 37.500 0.00 0.00 0.00 3.69
3239 4094 9.730420 GTGATCTAAATGTTGTTGTGTTAGTTT 57.270 29.630 0.00 0.00 0.00 2.66
3240 4095 9.120538 AGTGATCTAAATGTTGTTGTGTTAGTT 57.879 29.630 0.00 0.00 0.00 2.24
3241 4096 8.677148 AGTGATCTAAATGTTGTTGTGTTAGT 57.323 30.769 0.00 0.00 0.00 2.24
3243 4098 9.772973 AGTAGTGATCTAAATGTTGTTGTGTTA 57.227 29.630 0.00 0.00 0.00 2.41
3244 4099 8.677148 AGTAGTGATCTAAATGTTGTTGTGTT 57.323 30.769 0.00 0.00 0.00 3.32
3245 4100 8.677148 AAGTAGTGATCTAAATGTTGTTGTGT 57.323 30.769 0.00 0.00 0.00 3.72
3293 4148 9.995594 TTAACTAGTACTCCCTCCATAAACTAA 57.004 33.333 0.00 0.00 0.00 2.24
3295 4150 9.503369 AATTAACTAGTACTCCCTCCATAAACT 57.497 33.333 0.00 0.00 0.00 2.66
3299 4154 9.275572 ACAAAATTAACTAGTACTCCCTCCATA 57.724 33.333 0.00 0.00 0.00 2.74
3300 4155 8.159229 ACAAAATTAACTAGTACTCCCTCCAT 57.841 34.615 0.00 0.00 0.00 3.41
3301 4156 7.563724 ACAAAATTAACTAGTACTCCCTCCA 57.436 36.000 0.00 0.00 0.00 3.86
3302 4157 9.948964 TTTACAAAATTAACTAGTACTCCCTCC 57.051 33.333 0.00 0.00 0.00 4.30
3304 4159 9.955102 CCTTTACAAAATTAACTAGTACTCCCT 57.045 33.333 0.00 0.00 0.00 4.20
3305 4160 9.170734 CCCTTTACAAAATTAACTAGTACTCCC 57.829 37.037 0.00 0.00 0.00 4.30
3306 4161 9.730705 ACCCTTTACAAAATTAACTAGTACTCC 57.269 33.333 0.00 0.00 0.00 3.85
3349 4204 6.918022 GCATAAGATTTTATGGGAGGAAAACG 59.082 38.462 15.61 0.00 44.11 3.60
3451 4322 6.368791 GGCCAAATTTATCTGGTTTTGAAGAC 59.631 38.462 0.00 0.00 34.97 3.01
3504 4376 6.798427 ATACAGTAACACTCCATCAGTCAT 57.202 37.500 0.00 0.00 30.26 3.06
3559 4435 9.429109 TCCTTTTCCCCATAATTCCTAATTTAC 57.571 33.333 0.00 0.00 32.38 2.01
3564 4440 8.767436 CATTTTCCTTTTCCCCATAATTCCTAA 58.233 33.333 0.00 0.00 0.00 2.69
3712 5844 8.122472 TCAGAAAGAATTTGGTAAAAGATCCC 57.878 34.615 0.00 0.00 39.27 3.85
3713 5845 8.797438 ACTCAGAAAGAATTTGGTAAAAGATCC 58.203 33.333 0.00 0.00 39.27 3.36
3752 5884 3.474693 ACAAACGCACTAAAACGTGTT 57.525 38.095 0.00 0.00 42.68 3.32
3757 5889 4.654015 TGAGTGAACAAACGCACTAAAAC 58.346 39.130 0.00 0.00 44.77 2.43
3766 7591 5.137403 CGGACTAAAATGAGTGAACAAACG 58.863 41.667 0.00 0.00 0.00 3.60
3785 7610 4.067192 ACAGTTTTACCCAACATACGGAC 58.933 43.478 0.00 0.00 0.00 4.79
3818 7643 2.663826 AAACAAGTTTTGCGGCAAGA 57.336 40.000 15.78 8.82 0.00 3.02
3825 7667 2.051423 GCGAGCCTAAACAAGTTTTGC 58.949 47.619 3.25 7.48 34.23 3.68
3926 7769 5.247507 TGCATATTTTCACAATCCCTTCG 57.752 39.130 0.00 0.00 0.00 3.79
3976 7819 3.316308 GGTCACAGTGAGCTGAAATGTTT 59.684 43.478 23.03 0.00 45.28 2.83
3978 7821 2.498167 GGTCACAGTGAGCTGAAATGT 58.502 47.619 23.03 0.00 45.28 2.71
3986 7829 6.807230 CCGTATATATTTAGGTCACAGTGAGC 59.193 42.308 22.89 22.89 44.62 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.