Multiple sequence alignment - TraesCS2B01G080400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G080400 chr2B 100.000 5255 0 0 1 5255 44923489 44928743 0.000000e+00 9705.0
1 TraesCS2B01G080400 chr2B 95.385 3185 140 3 1418 4601 45623560 45626738 0.000000e+00 5060.0
2 TraesCS2B01G080400 chr2B 96.727 1894 61 1 2754 4646 45617275 45615382 0.000000e+00 3153.0
3 TraesCS2B01G080400 chr2B 93.945 1734 105 0 1022 2755 45700674 45702407 0.000000e+00 2621.0
4 TraesCS2B01G080400 chr2B 97.465 434 6 3 4823 5255 45615405 45614976 0.000000e+00 736.0
5 TraesCS2B01G080400 chr2B 95.000 420 12 3 4843 5255 45626823 45627240 0.000000e+00 651.0
6 TraesCS2B01G080400 chr2B 88.043 552 37 15 2 534 45699734 45700275 1.240000e-175 627.0
7 TraesCS2B01G080400 chr2B 90.977 399 27 6 758 1151 45623184 45623578 3.600000e-146 529.0
8 TraesCS2B01G080400 chr2B 85.496 393 19 15 146 534 45622651 45623009 4.970000e-100 375.0
9 TraesCS2B01G080400 chr2B 94.811 212 9 1 758 967 45700450 45700661 3.920000e-86 329.0
10 TraesCS2B01G080400 chr2B 95.567 203 6 2 4633 4835 657197970 657198169 6.560000e-84 322.0
11 TraesCS2B01G080400 chr7D 89.720 2218 200 16 759 2957 302743363 302745571 0.000000e+00 2808.0
12 TraesCS2B01G080400 chr7D 94.505 91 5 0 4999 5089 302746414 302746504 1.970000e-29 141.0
13 TraesCS2B01G080400 chr7D 92.405 79 5 1 239 317 302742950 302743027 1.550000e-20 111.0
14 TraesCS2B01G080400 chr7D 90.909 77 7 0 404 480 302743046 302743122 2.590000e-18 104.0
15 TraesCS2B01G080400 chr7D 96.429 56 1 1 659 714 302743215 302743269 2.020000e-14 91.6
16 TraesCS2B01G080400 chr7D 100.000 30 0 0 333 362 302743024 302743053 7.350000e-04 56.5
17 TraesCS2B01G080400 chr2A 88.858 2181 210 19 805 2955 30300780 30302957 0.000000e+00 2651.0
18 TraesCS2B01G080400 chr2A 85.614 2426 279 31 593 2957 30272536 30270120 0.000000e+00 2483.0
19 TraesCS2B01G080400 chr2A 92.823 1672 108 3 2974 4645 30270130 30268471 0.000000e+00 2412.0
20 TraesCS2B01G080400 chr2A 85.072 2425 286 37 598 2957 30256885 30254472 0.000000e+00 2403.0
21 TraesCS2B01G080400 chr2A 92.703 1672 110 3 2974 4645 30254482 30252823 0.000000e+00 2401.0
22 TraesCS2B01G080400 chr2A 92.524 1672 112 4 2974 4645 30244880 30243222 0.000000e+00 2383.0
23 TraesCS2B01G080400 chr2A 87.080 2113 257 13 855 2957 30246976 30244870 0.000000e+00 2375.0
24 TraesCS2B01G080400 chr2A 86.521 1966 257 6 996 2957 30164887 30162926 0.000000e+00 2156.0
25 TraesCS2B01G080400 chr2A 87.563 1584 180 13 2974 4545 30302949 30304527 0.000000e+00 1818.0
26 TraesCS2B01G080400 chr2A 89.823 452 23 6 4823 5253 30268493 30268044 4.600000e-155 558.0
27 TraesCS2B01G080400 chr2A 89.381 452 24 6 4823 5253 30243244 30242796 9.950000e-152 547.0
28 TraesCS2B01G080400 chr2A 89.159 452 20 7 4823 5253 30252845 30252402 2.150000e-148 536.0
29 TraesCS2B01G080400 chr2A 92.661 109 8 0 393 501 30196105 30195997 1.960000e-34 158.0
30 TraesCS2B01G080400 chr2D 92.350 1634 111 6 2974 4603 28416604 28414981 0.000000e+00 2313.0
31 TraesCS2B01G080400 chr2D 86.539 1939 255 3 1022 2957 28001709 27999774 0.000000e+00 2130.0
32 TraesCS2B01G080400 chr2D 81.486 1615 249 27 2975 4547 27999783 27998177 0.000000e+00 1280.0
33 TraesCS2B01G080400 chr2D 83.053 1369 208 11 2975 4321 27958782 27960148 0.000000e+00 1221.0
34 TraesCS2B01G080400 chr2D 83.607 732 104 6 855 1585 28418099 28417383 0.000000e+00 673.0
35 TraesCS2B01G080400 chr2D 85.854 410 31 7 141 537 28419020 28418625 1.360000e-110 411.0
36 TraesCS2B01G080400 chr2D 84.975 406 31 15 4872 5255 28414831 28414434 8.260000e-103 385.0
37 TraesCS2B01G080400 chr2D 89.925 268 15 7 758 1017 28066304 28066041 8.430000e-88 335.0
38 TraesCS2B01G080400 chr2D 85.827 127 7 7 593 713 28418419 28418298 1.990000e-24 124.0
39 TraesCS2B01G080400 chr4A 98.413 189 2 1 4638 4825 710743525 710743713 1.090000e-86 331.0
40 TraesCS2B01G080400 chr4A 97.884 189 4 0 4637 4825 20234535 20234723 1.410000e-85 327.0
41 TraesCS2B01G080400 chr1B 97.436 195 3 2 4632 4825 33923053 33923246 1.090000e-86 331.0
42 TraesCS2B01G080400 chr5D 97.409 193 4 1 4632 4824 50385982 50386173 1.410000e-85 327.0
43 TraesCS2B01G080400 chr3B 96.923 195 6 0 4630 4824 277752200 277752394 1.410000e-85 327.0
44 TraesCS2B01G080400 chr1A 97.884 189 3 1 4636 4824 583789129 583789316 5.070000e-85 326.0
45 TraesCS2B01G080400 chr7B 97.382 191 3 2 4635 4825 107167625 107167437 1.830000e-84 324.0
46 TraesCS2B01G080400 chr5A 92.889 225 13 3 4643 4867 596662343 596662122 1.830000e-84 324.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G080400 chr2B 44923489 44928743 5254 False 9705.000000 9705 100.000000 1 5255 1 chr2B.!!$F1 5254
1 TraesCS2B01G080400 chr2B 45614976 45617275 2299 True 1944.500000 3153 97.096000 2754 5255 2 chr2B.!!$R1 2501
2 TraesCS2B01G080400 chr2B 45622651 45627240 4589 False 1653.750000 5060 91.714500 146 5255 4 chr2B.!!$F3 5109
3 TraesCS2B01G080400 chr2B 45699734 45702407 2673 False 1192.333333 2621 92.266333 2 2755 3 chr2B.!!$F4 2753
4 TraesCS2B01G080400 chr7D 302742950 302746504 3554 False 552.016667 2808 93.994667 239 5089 6 chr7D.!!$F1 4850
5 TraesCS2B01G080400 chr2A 30300780 30304527 3747 False 2234.500000 2651 88.210500 805 4545 2 chr2A.!!$F1 3740
6 TraesCS2B01G080400 chr2A 30162926 30164887 1961 True 2156.000000 2156 86.521000 996 2957 1 chr2A.!!$R1 1961
7 TraesCS2B01G080400 chr2A 30268044 30272536 4492 True 1817.666667 2483 89.420000 593 5253 3 chr2A.!!$R5 4660
8 TraesCS2B01G080400 chr2A 30252402 30256885 4483 True 1780.000000 2403 88.978000 598 5253 3 chr2A.!!$R4 4655
9 TraesCS2B01G080400 chr2A 30242796 30246976 4180 True 1768.333333 2383 89.661667 855 5253 3 chr2A.!!$R3 4398
10 TraesCS2B01G080400 chr2D 27998177 28001709 3532 True 1705.000000 2130 84.012500 1022 4547 2 chr2D.!!$R2 3525
11 TraesCS2B01G080400 chr2D 27958782 27960148 1366 False 1221.000000 1221 83.053000 2975 4321 1 chr2D.!!$F1 1346
12 TraesCS2B01G080400 chr2D 28414434 28419020 4586 True 781.200000 2313 86.522600 141 5255 5 chr2D.!!$R3 5114

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
721 932 0.239879 CGTTTGGATTTGGGTGGACG 59.760 55.0 0.00 0.0 0.00 4.79 F
725 936 0.474614 TGGATTTGGGTGGACGAACA 59.525 50.0 0.00 0.0 0.00 3.18 F
1165 1513 0.839277 TGGCATCCTACACTCATGGG 59.161 55.0 0.00 0.0 0.00 4.00 F
1287 1635 0.940126 GGCAGTTATCTGGATGCGTG 59.060 55.0 3.05 0.0 41.57 5.34 F
2593 2942 1.496060 TGGCTCAGTACCATCCGAAT 58.504 50.0 0.00 0.0 30.29 3.34 F
3663 4087 0.179032 ATGCCCACAACGAACTGACA 60.179 50.0 0.00 0.0 0.00 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2603 2952 0.545548 ACCCAAGGAGAGTGGAGGAC 60.546 60.000 0.00 0.0 38.54 3.85 R
2799 3151 1.971167 GAATTCAGGCACGGCACCA 60.971 57.895 0.00 0.0 0.00 4.17 R
3055 3461 0.246635 ACAATTAGCAGCGAGGTCGT 59.753 50.000 0.69 0.0 42.22 4.34 R
3100 3506 4.151883 AGCAGAAACCATAACAACACCAT 58.848 39.130 0.00 0.0 0.00 3.55 R
4056 4480 0.827925 TCTCTGCAACTCTGTCGGGT 60.828 55.000 0.00 0.0 0.00 5.28 R
4762 5332 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.0 0.00 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 3.889196 TGATTTTACTGTTCGCCACAC 57.111 42.857 0.00 0.00 0.00 3.82
55 56 3.472652 TGATTTTACTGTTCGCCACACT 58.527 40.909 0.00 0.00 0.00 3.55
59 60 1.860676 TACTGTTCGCCACACTTGTC 58.139 50.000 0.00 0.00 0.00 3.18
62 63 0.460459 TGTTCGCCACACTTGTCGAA 60.460 50.000 2.70 2.70 38.42 3.71
79 80 1.676529 CGAACCGGAGATGCTCTTAGA 59.323 52.381 9.46 0.00 0.00 2.10
88 89 5.694006 CGGAGATGCTCTTAGATTTAGTTGG 59.306 44.000 0.00 0.00 0.00 3.77
91 92 5.430089 AGATGCTCTTAGATTTAGTTGGGGT 59.570 40.000 0.00 0.00 0.00 4.95
93 94 4.534500 TGCTCTTAGATTTAGTTGGGGTGA 59.466 41.667 0.00 0.00 0.00 4.02
97 98 5.425539 TCTTAGATTTAGTTGGGGTGAGAGG 59.574 44.000 0.00 0.00 0.00 3.69
98 99 3.803340 AGATTTAGTTGGGGTGAGAGGA 58.197 45.455 0.00 0.00 0.00 3.71
99 100 3.777522 AGATTTAGTTGGGGTGAGAGGAG 59.222 47.826 0.00 0.00 0.00 3.69
100 101 3.269592 TTTAGTTGGGGTGAGAGGAGA 57.730 47.619 0.00 0.00 0.00 3.71
108 109 0.689080 GGTGAGAGGAGATGAGGCCA 60.689 60.000 5.01 0.00 0.00 5.36
116 117 3.359950 AGGAGATGAGGCCAATTTCAAC 58.640 45.455 5.01 0.00 0.00 3.18
117 118 3.091545 GGAGATGAGGCCAATTTCAACA 58.908 45.455 5.01 0.00 0.00 3.33
118 119 3.511146 GGAGATGAGGCCAATTTCAACAA 59.489 43.478 5.01 0.00 0.00 2.83
120 121 2.818130 TGAGGCCAATTTCAACAAGC 57.182 45.000 5.01 0.00 0.00 4.01
121 122 1.000385 TGAGGCCAATTTCAACAAGCG 60.000 47.619 5.01 0.00 0.00 4.68
124 125 1.066929 GGCCAATTTCAACAAGCGGAT 60.067 47.619 0.00 0.00 0.00 4.18
128 129 2.642139 ATTTCAACAAGCGGATGCAG 57.358 45.000 0.00 0.00 46.23 4.41
130 131 1.825090 TTCAACAAGCGGATGCAGAT 58.175 45.000 0.00 0.00 46.23 2.90
131 132 1.825090 TCAACAAGCGGATGCAGATT 58.175 45.000 0.00 0.00 46.23 2.40
132 133 2.161855 TCAACAAGCGGATGCAGATTT 58.838 42.857 0.00 0.00 46.23 2.17
133 134 2.095110 TCAACAAGCGGATGCAGATTTG 60.095 45.455 0.00 0.00 46.23 2.32
134 135 1.825090 ACAAGCGGATGCAGATTTGA 58.175 45.000 0.00 0.00 46.23 2.69
135 136 2.372264 ACAAGCGGATGCAGATTTGAT 58.628 42.857 0.00 0.00 46.23 2.57
136 137 2.756760 ACAAGCGGATGCAGATTTGATT 59.243 40.909 0.00 0.00 46.23 2.57
137 138 3.194116 ACAAGCGGATGCAGATTTGATTT 59.806 39.130 0.00 0.00 46.23 2.17
138 139 4.178540 CAAGCGGATGCAGATTTGATTTT 58.821 39.130 0.00 0.00 46.23 1.82
139 140 3.777478 AGCGGATGCAGATTTGATTTTG 58.223 40.909 0.00 0.00 46.23 2.44
157 166 2.642154 TGGGTTTTTCAGTCGGCTTA 57.358 45.000 0.00 0.00 0.00 3.09
161 170 3.756963 GGGTTTTTCAGTCGGCTTAGAAT 59.243 43.478 0.00 0.00 0.00 2.40
185 196 4.675029 CGGACGGGCGTTTGGAGT 62.675 66.667 0.00 0.00 0.00 3.85
199 210 1.373812 GGAGTTGGCCTTACGGTGT 59.626 57.895 3.32 0.00 0.00 4.16
541 613 1.590259 GAGCTTCGCCGTCATCTCC 60.590 63.158 0.00 0.00 0.00 3.71
591 663 3.969250 TTCCCAATCCGCCACGCTC 62.969 63.158 0.00 0.00 0.00 5.03
596 787 3.665675 AATCCGCCACGCTCCAGTC 62.666 63.158 0.00 0.00 0.00 3.51
618 810 5.061311 GTCAACCAAGCATTTTCAATCATCG 59.939 40.000 0.00 0.00 0.00 3.84
646 844 3.916061 GCACAACGCTGACTGAAAA 57.084 47.368 0.00 0.00 37.77 2.29
647 845 2.187351 GCACAACGCTGACTGAAAAA 57.813 45.000 0.00 0.00 37.77 1.94
660 858 3.468770 ACTGAAAAATTGCAATGCAGCA 58.531 36.364 13.82 8.68 40.61 4.41
666 864 4.875544 AAATTGCAATGCAGCATCATTC 57.124 36.364 13.82 0.00 45.19 2.67
669 867 3.603158 TGCAATGCAGCATCATTCTTT 57.397 38.095 8.77 0.00 40.11 2.52
670 868 3.932822 TGCAATGCAGCATCATTCTTTT 58.067 36.364 8.77 0.00 40.11 2.27
721 932 0.239879 CGTTTGGATTTGGGTGGACG 59.760 55.000 0.00 0.00 0.00 4.79
725 936 0.474614 TGGATTTGGGTGGACGAACA 59.525 50.000 0.00 0.00 0.00 3.18
728 939 2.432444 GATTTGGGTGGACGAACATGA 58.568 47.619 0.00 0.00 0.00 3.07
734 945 1.070175 GGTGGACGAACATGACGTTTG 60.070 52.381 19.11 0.00 43.97 2.93
752 967 2.472695 TGTTTGAAGGGATCTCACCG 57.527 50.000 0.00 0.00 0.00 4.94
768 1026 1.898574 CCGCTCCCTTGTGCTGTTT 60.899 57.895 0.00 0.00 0.00 2.83
853 1162 5.640158 TTCAGAGGTCTTTGTTTCCCTTA 57.360 39.130 0.00 0.00 0.00 2.69
871 1180 3.303725 CCTTACACACACGTTCACATTGG 60.304 47.826 0.00 0.00 0.00 3.16
931 1255 5.530915 TGTCTGGTACACAAATCCTTCAAAG 59.469 40.000 0.00 0.00 31.43 2.77
1005 1346 2.696989 TTCACATCGACATCATGCCT 57.303 45.000 0.00 0.00 0.00 4.75
1016 1357 1.063616 CATCATGCCTTCAGTCTTGCG 59.936 52.381 0.00 0.00 0.00 4.85
1018 1359 1.275010 TCATGCCTTCAGTCTTGCGTA 59.725 47.619 0.00 0.00 0.00 4.42
1165 1513 0.839277 TGGCATCCTACACTCATGGG 59.161 55.000 0.00 0.00 0.00 4.00
1287 1635 0.940126 GGCAGTTATCTGGATGCGTG 59.060 55.000 3.05 0.00 41.57 5.34
1388 1736 4.702131 GCTTCCAAACCTTCATACACTGAT 59.298 41.667 0.00 0.00 32.72 2.90
1395 1743 4.910195 ACCTTCATACACTGATTCTTGCA 58.090 39.130 0.00 0.00 32.72 4.08
1526 1874 1.547820 CAGTAGCTCCTCACTCAGCAA 59.452 52.381 0.00 0.00 38.18 3.91
1848 2196 2.698855 TCAACAGCTTATCAGGGAGC 57.301 50.000 0.00 0.00 39.17 4.70
1881 2229 7.995289 TGTCTTTTTACAACATGACATCACTT 58.005 30.769 0.00 0.00 30.78 3.16
1897 2245 8.849168 TGACATCACTTGAATTCTTTAATGTGT 58.151 29.630 7.05 4.13 0.00 3.72
2098 2446 2.977772 TGGTTCTTTGGCAAACTTGG 57.022 45.000 8.93 0.00 0.00 3.61
2233 2582 6.891306 ATGGCAGCCTACCTATATCAATTA 57.109 37.500 14.15 0.00 0.00 1.40
2401 2750 4.377021 TGGCAAGCTACGAAACCTATATG 58.623 43.478 0.00 0.00 0.00 1.78
2442 2791 5.053978 ACAAATTATCAGGTCAGATCCCC 57.946 43.478 0.00 0.00 0.00 4.81
2533 2882 2.354805 CCTGGTAGTTTAGGTCAGTGCC 60.355 54.545 0.00 0.00 0.00 5.01
2534 2883 1.626825 TGGTAGTTTAGGTCAGTGCCC 59.373 52.381 0.59 0.00 0.00 5.36
2565 2914 8.433421 TTCTTGAACTAAACTTGTCTCGAAAT 57.567 30.769 0.00 0.00 0.00 2.17
2567 2916 9.193133 TCTTGAACTAAACTTGTCTCGAAATAG 57.807 33.333 0.00 0.00 0.00 1.73
2593 2942 1.496060 TGGCTCAGTACCATCCGAAT 58.504 50.000 0.00 0.00 30.29 3.34
2603 2952 4.876107 AGTACCATCCGAATTGTTTGCTAG 59.124 41.667 0.00 0.00 0.00 3.42
2772 3124 6.464465 GGCATCTACTAGTATCAACCCAACAT 60.464 42.308 2.33 0.00 0.00 2.71
2951 3303 5.920840 GCAACAAGGGACTCTGTTTAAATTC 59.079 40.000 0.00 0.00 38.49 2.17
2952 3304 6.447162 CAACAAGGGACTCTGTTTAAATTCC 58.553 40.000 0.00 0.00 38.49 3.01
2953 3305 5.953571 ACAAGGGACTCTGTTTAAATTCCT 58.046 37.500 0.00 0.00 38.49 3.36
2954 3306 6.004574 ACAAGGGACTCTGTTTAAATTCCTC 58.995 40.000 0.00 0.00 38.49 3.71
2955 3307 5.180810 AGGGACTCTGTTTAAATTCCTCC 57.819 43.478 0.00 0.00 0.00 4.30
2956 3308 4.601857 AGGGACTCTGTTTAAATTCCTCCA 59.398 41.667 0.00 0.00 0.00 3.86
2957 3309 5.074515 AGGGACTCTGTTTAAATTCCTCCAA 59.925 40.000 0.00 0.00 0.00 3.53
2958 3310 5.416013 GGGACTCTGTTTAAATTCCTCCAAG 59.584 44.000 0.00 0.00 0.00 3.61
2959 3311 6.004574 GGACTCTGTTTAAATTCCTCCAAGT 58.995 40.000 0.00 0.00 0.00 3.16
2960 3312 6.490381 GGACTCTGTTTAAATTCCTCCAAGTT 59.510 38.462 0.00 0.00 0.00 2.66
2961 3313 7.277174 ACTCTGTTTAAATTCCTCCAAGTTG 57.723 36.000 0.00 0.00 0.00 3.16
2962 3314 7.060421 ACTCTGTTTAAATTCCTCCAAGTTGA 58.940 34.615 3.87 0.00 0.00 3.18
2963 3315 7.725844 ACTCTGTTTAAATTCCTCCAAGTTGAT 59.274 33.333 3.87 0.00 0.00 2.57
2964 3316 9.231297 CTCTGTTTAAATTCCTCCAAGTTGATA 57.769 33.333 3.87 0.00 0.00 2.15
2965 3317 9.581289 TCTGTTTAAATTCCTCCAAGTTGATAA 57.419 29.630 3.87 0.00 0.00 1.75
3055 3461 2.865119 ACACCATCTGTCATTGCTGA 57.135 45.000 0.00 0.00 0.00 4.26
3225 3649 2.203394 GCCCCGTGCCATGATGAT 60.203 61.111 0.00 0.00 0.00 2.45
3408 3832 5.780793 ACCTGGTGGATATGATAGTTACCTC 59.219 44.000 0.00 0.00 37.04 3.85
3577 4001 4.097551 TCTGACCAACACAATGGAATCA 57.902 40.909 0.00 0.00 43.54 2.57
3663 4087 0.179032 ATGCCCACAACGAACTGACA 60.179 50.000 0.00 0.00 0.00 3.58
3817 4241 3.288092 GTTGGAGGGACAATTGGATACC 58.712 50.000 10.83 6.16 32.24 2.73
3936 4360 1.139853 GGAATGGGTTGCGAGATCTCT 59.860 52.381 20.26 0.00 0.00 3.10
3941 4365 2.025155 GGGTTGCGAGATCTCTGTAGA 58.975 52.381 20.26 0.00 35.80 2.59
4059 4483 8.038944 TGTAAGTTCTGTGAATCTATGTTACCC 58.961 37.037 0.00 0.00 0.00 3.69
4233 4657 3.917985 ACGTTTGTGCAAAACTTTCTGAC 59.082 39.130 16.84 0.65 31.33 3.51
4553 5010 5.682943 TGTAAAGGTGTTTTCCGATGAAG 57.317 39.130 0.00 0.00 0.00 3.02
4593 5106 5.221925 ACAGCCTGATGGGTAATATTCGAAT 60.222 40.000 16.15 16.15 43.07 3.34
4647 5217 8.974060 TCAGTAGCCAATTATAAAGTAAAGGG 57.026 34.615 0.00 0.00 0.00 3.95
4648 5218 7.501225 TCAGTAGCCAATTATAAAGTAAAGGGC 59.499 37.037 0.00 0.00 39.14 5.19
4649 5219 7.284489 CAGTAGCCAATTATAAAGTAAAGGGCA 59.716 37.037 0.00 0.00 41.23 5.36
4650 5220 6.715347 AGCCAATTATAAAGTAAAGGGCAG 57.285 37.500 0.00 0.00 41.23 4.85
4651 5221 5.069119 AGCCAATTATAAAGTAAAGGGCAGC 59.931 40.000 0.00 0.00 41.23 5.25
4652 5222 5.739070 GCCAATTATAAAGTAAAGGGCAGCC 60.739 44.000 1.26 1.26 38.71 4.85
4653 5223 5.221441 CCAATTATAAAGTAAAGGGCAGCCC 60.221 44.000 24.90 24.90 45.90 5.19
4664 5234 2.045045 GCAGCCCCAGTGCATGTA 60.045 61.111 0.00 0.00 40.86 2.29
4665 5235 2.117156 GCAGCCCCAGTGCATGTAG 61.117 63.158 0.00 0.00 40.86 2.74
4666 5236 2.117156 CAGCCCCAGTGCATGTAGC 61.117 63.158 0.00 0.00 45.96 3.58
4667 5237 2.273449 GCCCCAGTGCATGTAGCT 59.727 61.111 0.00 0.00 45.94 3.32
4668 5238 1.821332 GCCCCAGTGCATGTAGCTC 60.821 63.158 0.00 0.00 45.94 4.09
4669 5239 1.153086 CCCCAGTGCATGTAGCTCC 60.153 63.158 0.00 0.00 45.94 4.70
4670 5240 1.153086 CCCAGTGCATGTAGCTCCC 60.153 63.158 0.00 0.00 45.94 4.30
4671 5241 1.522355 CCAGTGCATGTAGCTCCCG 60.522 63.158 0.00 0.00 45.94 5.14
4672 5242 2.176273 CAGTGCATGTAGCTCCCGC 61.176 63.158 0.00 0.00 45.94 6.13
4674 5244 1.450312 GTGCATGTAGCTCCCGCTT 60.450 57.895 0.00 0.00 46.47 4.68
4675 5245 1.450134 TGCATGTAGCTCCCGCTTG 60.450 57.895 0.00 0.00 46.47 4.01
4676 5246 1.450312 GCATGTAGCTCCCGCTTGT 60.450 57.895 0.00 0.00 46.47 3.16
4677 5247 1.709147 GCATGTAGCTCCCGCTTGTG 61.709 60.000 0.00 0.00 46.47 3.33
4678 5248 1.450312 ATGTAGCTCCCGCTTGTGC 60.450 57.895 0.00 0.00 46.47 4.57
4679 5249 2.047274 GTAGCTCCCGCTTGTGCA 60.047 61.111 0.00 0.00 46.47 4.57
4680 5250 2.103042 GTAGCTCCCGCTTGTGCAG 61.103 63.158 0.00 0.00 46.47 4.41
4681 5251 3.315142 TAGCTCCCGCTTGTGCAGG 62.315 63.158 0.00 0.00 46.47 4.85
4683 5253 4.335647 CTCCCGCTTGTGCAGGGT 62.336 66.667 7.78 0.00 46.04 4.34
4684 5254 4.329545 TCCCGCTTGTGCAGGGTC 62.330 66.667 7.78 0.00 46.04 4.46
4685 5255 4.335647 CCCGCTTGTGCAGGGTCT 62.336 66.667 0.00 0.00 43.24 3.85
4686 5256 3.052082 CCGCTTGTGCAGGGTCTG 61.052 66.667 0.00 0.00 39.64 3.51
4687 5257 3.052082 CGCTTGTGCAGGGTCTGG 61.052 66.667 0.00 0.00 39.64 3.86
4688 5258 2.674380 GCTTGTGCAGGGTCTGGG 60.674 66.667 0.00 0.00 39.41 4.45
4689 5259 2.034687 CTTGTGCAGGGTCTGGGG 59.965 66.667 0.00 0.00 31.21 4.96
4690 5260 2.449518 TTGTGCAGGGTCTGGGGA 60.450 61.111 0.00 0.00 31.21 4.81
4691 5261 2.067932 CTTGTGCAGGGTCTGGGGAA 62.068 60.000 0.00 0.00 31.21 3.97
4692 5262 2.067932 TTGTGCAGGGTCTGGGGAAG 62.068 60.000 0.00 0.00 31.21 3.46
4693 5263 2.935481 TGCAGGGTCTGGGGAAGG 60.935 66.667 0.00 0.00 31.21 3.46
4694 5264 3.732849 GCAGGGTCTGGGGAAGGG 61.733 72.222 0.00 0.00 31.21 3.95
4695 5265 2.204151 CAGGGTCTGGGGAAGGGT 60.204 66.667 0.00 0.00 0.00 4.34
4696 5266 2.125225 AGGGTCTGGGGAAGGGTC 59.875 66.667 0.00 0.00 0.00 4.46
4697 5267 3.015753 GGGTCTGGGGAAGGGTCC 61.016 72.222 0.00 0.00 44.10 4.46
4698 5268 3.400054 GGTCTGGGGAAGGGTCCG 61.400 72.222 0.00 0.00 46.04 4.79
4699 5269 2.284405 GTCTGGGGAAGGGTCCGA 60.284 66.667 0.00 0.00 46.04 4.55
4700 5270 2.284405 TCTGGGGAAGGGTCCGAC 60.284 66.667 0.00 0.00 46.04 4.79
4701 5271 3.400054 CTGGGGAAGGGTCCGACC 61.400 72.222 9.30 9.30 46.04 4.79
4702 5272 4.257810 TGGGGAAGGGTCCGACCA 62.258 66.667 19.43 0.00 46.04 4.02
4703 5273 3.714001 GGGGAAGGGTCCGACCAC 61.714 72.222 19.43 8.70 46.04 4.16
4704 5274 2.606826 GGGAAGGGTCCGACCACT 60.607 66.667 19.43 10.80 46.04 4.00
4705 5275 2.222013 GGGAAGGGTCCGACCACTT 61.222 63.158 19.43 17.88 46.04 3.16
4706 5276 1.759236 GGAAGGGTCCGACCACTTT 59.241 57.895 19.43 9.96 41.02 2.66
4707 5277 0.605589 GGAAGGGTCCGACCACTTTG 60.606 60.000 19.43 0.00 41.02 2.77
4708 5278 0.605589 GAAGGGTCCGACCACTTTGG 60.606 60.000 19.43 0.00 41.02 3.28
4709 5279 2.033602 GGGTCCGACCACTTTGGG 59.966 66.667 19.43 0.00 43.37 4.12
4710 5280 2.826003 GGGTCCGACCACTTTGGGT 61.826 63.158 19.43 0.00 43.37 4.51
4720 5290 3.934068 ACCACTTTGGGTCTATTGTACG 58.066 45.455 0.00 0.00 43.37 3.67
4721 5291 2.676342 CCACTTTGGGTCTATTGTACGC 59.324 50.000 0.00 0.00 32.67 4.42
4722 5292 3.331150 CACTTTGGGTCTATTGTACGCA 58.669 45.455 0.00 0.00 37.94 5.24
4723 5293 3.370978 CACTTTGGGTCTATTGTACGCAG 59.629 47.826 0.00 0.00 40.36 5.18
4724 5294 2.018542 TTGGGTCTATTGTACGCAGC 57.981 50.000 0.00 0.00 40.36 5.25
4725 5295 0.177141 TGGGTCTATTGTACGCAGCC 59.823 55.000 0.00 0.00 35.18 4.85
4726 5296 0.464452 GGGTCTATTGTACGCAGCCT 59.536 55.000 0.00 0.00 0.00 4.58
4727 5297 1.134491 GGGTCTATTGTACGCAGCCTT 60.134 52.381 0.00 0.00 0.00 4.35
4728 5298 2.629051 GGTCTATTGTACGCAGCCTTT 58.371 47.619 0.00 0.00 0.00 3.11
4729 5299 2.608090 GGTCTATTGTACGCAGCCTTTC 59.392 50.000 0.00 0.00 0.00 2.62
4730 5300 2.608090 GTCTATTGTACGCAGCCTTTCC 59.392 50.000 0.00 0.00 0.00 3.13
4731 5301 1.940613 CTATTGTACGCAGCCTTTCCC 59.059 52.381 0.00 0.00 0.00 3.97
4732 5302 0.328258 ATTGTACGCAGCCTTTCCCT 59.672 50.000 0.00 0.00 0.00 4.20
4733 5303 0.978151 TTGTACGCAGCCTTTCCCTA 59.022 50.000 0.00 0.00 0.00 3.53
4734 5304 0.248289 TGTACGCAGCCTTTCCCTAC 59.752 55.000 0.00 0.00 0.00 3.18
4735 5305 0.248289 GTACGCAGCCTTTCCCTACA 59.752 55.000 0.00 0.00 0.00 2.74
4736 5306 1.134491 GTACGCAGCCTTTCCCTACAT 60.134 52.381 0.00 0.00 0.00 2.29
4737 5307 0.328258 ACGCAGCCTTTCCCTACATT 59.672 50.000 0.00 0.00 0.00 2.71
4738 5308 1.271926 ACGCAGCCTTTCCCTACATTT 60.272 47.619 0.00 0.00 0.00 2.32
4739 5309 1.401905 CGCAGCCTTTCCCTACATTTC 59.598 52.381 0.00 0.00 0.00 2.17
4740 5310 2.728007 GCAGCCTTTCCCTACATTTCT 58.272 47.619 0.00 0.00 0.00 2.52
4741 5311 2.424956 GCAGCCTTTCCCTACATTTCTG 59.575 50.000 0.00 0.00 0.00 3.02
4742 5312 2.424956 CAGCCTTTCCCTACATTTCTGC 59.575 50.000 0.00 0.00 0.00 4.26
4743 5313 2.041620 AGCCTTTCCCTACATTTCTGCA 59.958 45.455 0.00 0.00 0.00 4.41
4744 5314 2.825532 GCCTTTCCCTACATTTCTGCAA 59.174 45.455 0.00 0.00 0.00 4.08
4745 5315 3.119352 GCCTTTCCCTACATTTCTGCAAG 60.119 47.826 0.00 0.00 0.00 4.01
4746 5316 4.335416 CCTTTCCCTACATTTCTGCAAGA 58.665 43.478 0.00 0.00 44.68 3.02
4756 5326 3.329300 TCTGCAAGAGGCTGTTTCC 57.671 52.632 0.00 0.00 38.67 3.13
4757 5327 0.473755 TCTGCAAGAGGCTGTTTCCA 59.526 50.000 0.00 0.00 38.67 3.53
4758 5328 0.879765 CTGCAAGAGGCTGTTTCCAG 59.120 55.000 0.00 0.00 45.15 3.86
4759 5329 0.538057 TGCAAGAGGCTGTTTCCAGG 60.538 55.000 0.00 0.00 45.15 4.45
4760 5330 0.250901 GCAAGAGGCTGTTTCCAGGA 60.251 55.000 0.00 0.00 39.22 3.86
4761 5331 1.528129 CAAGAGGCTGTTTCCAGGAC 58.472 55.000 0.00 0.00 39.22 3.85
4762 5332 1.072965 CAAGAGGCTGTTTCCAGGACT 59.927 52.381 0.00 0.00 39.22 3.85
4763 5333 1.439543 AGAGGCTGTTTCCAGGACTT 58.560 50.000 0.00 0.00 39.22 3.01
4764 5334 1.072965 AGAGGCTGTTTCCAGGACTTG 59.927 52.381 0.00 0.00 39.22 3.16
4765 5335 1.072331 GAGGCTGTTTCCAGGACTTGA 59.928 52.381 0.00 0.00 39.22 3.02
4766 5336 1.494721 AGGCTGTTTCCAGGACTTGAA 59.505 47.619 0.00 0.00 39.22 2.69
4767 5337 1.609072 GGCTGTTTCCAGGACTTGAAC 59.391 52.381 0.00 0.00 39.22 3.18
4768 5338 1.609072 GCTGTTTCCAGGACTTGAACC 59.391 52.381 0.00 0.00 39.22 3.62
4769 5339 2.230660 CTGTTTCCAGGACTTGAACCC 58.769 52.381 0.00 0.00 34.90 4.11
4770 5340 1.235724 GTTTCCAGGACTTGAACCCG 58.764 55.000 0.00 0.00 0.00 5.28
4771 5341 0.841289 TTTCCAGGACTTGAACCCGT 59.159 50.000 0.00 0.00 0.00 5.28
4772 5342 0.107831 TTCCAGGACTTGAACCCGTG 59.892 55.000 0.00 0.00 0.00 4.94
4773 5343 0.761323 TCCAGGACTTGAACCCGTGA 60.761 55.000 0.00 0.00 0.00 4.35
4774 5344 0.602905 CCAGGACTTGAACCCGTGAC 60.603 60.000 0.00 0.00 0.00 3.67
4775 5345 0.602905 CAGGACTTGAACCCGTGACC 60.603 60.000 0.00 0.00 0.00 4.02
4776 5346 0.763223 AGGACTTGAACCCGTGACCT 60.763 55.000 0.00 0.00 0.00 3.85
4777 5347 0.320508 GGACTTGAACCCGTGACCTC 60.321 60.000 0.00 0.00 0.00 3.85
4778 5348 0.391597 GACTTGAACCCGTGACCTCA 59.608 55.000 0.00 0.00 0.00 3.86
4779 5349 1.002087 GACTTGAACCCGTGACCTCAT 59.998 52.381 0.00 0.00 0.00 2.90
4780 5350 1.270839 ACTTGAACCCGTGACCTCATG 60.271 52.381 0.00 0.00 0.00 3.07
4791 5361 2.154139 ACCTCATGGTCACAAGGCA 58.846 52.632 0.00 0.00 44.78 4.75
4792 5362 0.478072 ACCTCATGGTCACAAGGCAA 59.522 50.000 0.00 0.00 44.78 4.52
4793 5363 0.883833 CCTCATGGTCACAAGGCAAC 59.116 55.000 0.00 0.00 0.00 4.17
4794 5364 1.608055 CTCATGGTCACAAGGCAACA 58.392 50.000 0.00 0.00 41.41 3.33
4795 5365 1.538512 CTCATGGTCACAAGGCAACAG 59.461 52.381 0.00 0.00 41.41 3.16
4796 5366 0.038892 CATGGTCACAAGGCAACAGC 60.039 55.000 0.00 0.00 41.41 4.40
4797 5367 0.178981 ATGGTCACAAGGCAACAGCT 60.179 50.000 0.00 0.00 41.41 4.24
4798 5368 0.395586 TGGTCACAAGGCAACAGCTT 60.396 50.000 0.00 0.00 41.41 3.74
4799 5369 0.746659 GGTCACAAGGCAACAGCTTT 59.253 50.000 0.00 0.00 41.41 3.51
4800 5370 1.953686 GGTCACAAGGCAACAGCTTTA 59.046 47.619 0.00 0.00 41.41 1.85
4801 5371 2.287608 GGTCACAAGGCAACAGCTTTAC 60.288 50.000 0.00 0.00 41.41 2.01
4802 5372 1.953686 TCACAAGGCAACAGCTTTACC 59.046 47.619 0.00 0.00 41.41 2.85
4803 5373 1.680735 CACAAGGCAACAGCTTTACCA 59.319 47.619 0.00 0.00 41.41 3.25
4804 5374 1.681264 ACAAGGCAACAGCTTTACCAC 59.319 47.619 0.00 0.00 41.41 4.16
4805 5375 1.956477 CAAGGCAACAGCTTTACCACT 59.044 47.619 0.00 0.00 41.41 4.00
4806 5376 1.609208 AGGCAACAGCTTTACCACTG 58.391 50.000 0.00 0.00 39.86 3.66
4807 5377 0.039165 GGCAACAGCTTTACCACTGC 60.039 55.000 0.00 0.00 37.42 4.40
4808 5378 0.385974 GCAACAGCTTTACCACTGCG 60.386 55.000 0.00 0.00 37.42 5.18
4809 5379 0.385974 CAACAGCTTTACCACTGCGC 60.386 55.000 0.00 0.00 37.42 6.09
4810 5380 1.515521 AACAGCTTTACCACTGCGCC 61.516 55.000 4.18 0.00 37.42 6.53
4811 5381 1.965930 CAGCTTTACCACTGCGCCA 60.966 57.895 4.18 0.00 0.00 5.69
4812 5382 1.228124 AGCTTTACCACTGCGCCAA 60.228 52.632 4.18 0.00 0.00 4.52
4813 5383 1.210155 GCTTTACCACTGCGCCAAG 59.790 57.895 4.18 0.00 0.00 3.61
4814 5384 1.875963 CTTTACCACTGCGCCAAGG 59.124 57.895 4.18 6.21 0.00 3.61
4815 5385 2.200170 CTTTACCACTGCGCCAAGGC 62.200 60.000 4.18 0.00 37.85 4.35
4816 5386 2.690653 TTTACCACTGCGCCAAGGCT 62.691 55.000 4.18 0.00 39.32 4.58
4817 5387 3.605749 TACCACTGCGCCAAGGCTC 62.606 63.158 4.18 1.20 39.32 4.70
4829 5399 4.058434 AGGCTCCCCTTCAGTAGC 57.942 61.111 0.00 0.00 38.74 3.58
4831 5401 3.727387 GCTCCCCTTCAGTAGCCA 58.273 61.111 0.00 0.00 0.00 4.75
4832 5402 1.991230 GCTCCCCTTCAGTAGCCAA 59.009 57.895 0.00 0.00 0.00 4.52
4833 5403 0.548510 GCTCCCCTTCAGTAGCCAAT 59.451 55.000 0.00 0.00 0.00 3.16
4834 5404 1.064389 GCTCCCCTTCAGTAGCCAATT 60.064 52.381 0.00 0.00 0.00 2.32
4835 5405 2.172717 GCTCCCCTTCAGTAGCCAATTA 59.827 50.000 0.00 0.00 0.00 1.40
4836 5406 3.181439 GCTCCCCTTCAGTAGCCAATTAT 60.181 47.826 0.00 0.00 0.00 1.28
4837 5407 4.041691 GCTCCCCTTCAGTAGCCAATTATA 59.958 45.833 0.00 0.00 0.00 0.98
4838 5408 5.456186 GCTCCCCTTCAGTAGCCAATTATAA 60.456 44.000 0.00 0.00 0.00 0.98
4839 5409 6.584471 TCCCCTTCAGTAGCCAATTATAAA 57.416 37.500 0.00 0.00 0.00 1.40
4840 5410 6.601332 TCCCCTTCAGTAGCCAATTATAAAG 58.399 40.000 0.00 0.00 0.00 1.85
4841 5411 6.159751 TCCCCTTCAGTAGCCAATTATAAAGT 59.840 38.462 0.00 0.00 0.00 2.66
4842 5412 7.348801 TCCCCTTCAGTAGCCAATTATAAAGTA 59.651 37.037 0.00 0.00 0.00 2.24
4843 5413 7.996644 CCCCTTCAGTAGCCAATTATAAAGTAA 59.003 37.037 0.00 0.00 0.00 2.24
4844 5414 9.403583 CCCTTCAGTAGCCAATTATAAAGTAAA 57.596 33.333 0.00 0.00 0.00 2.01
4958 5582 5.990996 GTCCATGGCCCATTATTGTTAAATG 59.009 40.000 6.96 0.00 34.71 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 9.482627 TGGCGAACAGTAAAATCAAATAAAATT 57.517 25.926 0.00 0.00 0.00 1.82
39 40 2.206750 GACAAGTGTGGCGAACAGTAA 58.793 47.619 0.00 0.00 41.83 2.24
48 49 2.604174 CCGGTTCGACAAGTGTGGC 61.604 63.158 0.00 0.00 0.00 5.01
54 55 0.108615 AGCATCTCCGGTTCGACAAG 60.109 55.000 0.00 0.00 0.00 3.16
55 56 0.108804 GAGCATCTCCGGTTCGACAA 60.109 55.000 0.00 0.00 0.00 3.18
79 80 3.803340 TCTCCTCTCACCCCAACTAAAT 58.197 45.455 0.00 0.00 0.00 1.40
88 89 1.406860 GGCCTCATCTCCTCTCACCC 61.407 65.000 0.00 0.00 0.00 4.61
91 92 2.187239 ATTGGCCTCATCTCCTCTCA 57.813 50.000 3.32 0.00 0.00 3.27
93 94 2.848694 TGAAATTGGCCTCATCTCCTCT 59.151 45.455 3.32 0.00 0.00 3.69
97 98 4.741342 CTTGTTGAAATTGGCCTCATCTC 58.259 43.478 3.32 0.00 0.00 2.75
98 99 3.056322 GCTTGTTGAAATTGGCCTCATCT 60.056 43.478 3.32 0.00 0.00 2.90
99 100 3.256558 GCTTGTTGAAATTGGCCTCATC 58.743 45.455 3.32 0.00 0.00 2.92
100 101 2.353011 CGCTTGTTGAAATTGGCCTCAT 60.353 45.455 3.32 0.00 0.00 2.90
108 109 2.557924 TCTGCATCCGCTTGTTGAAATT 59.442 40.909 0.00 0.00 39.64 1.82
116 117 3.431922 AATCAAATCTGCATCCGCTTG 57.568 42.857 0.00 0.00 39.64 4.01
117 118 4.178540 CAAAATCAAATCTGCATCCGCTT 58.821 39.130 0.00 0.00 39.64 4.68
118 119 3.429822 CCAAAATCAAATCTGCATCCGCT 60.430 43.478 0.00 0.00 39.64 5.52
120 121 3.119029 ACCCAAAATCAAATCTGCATCCG 60.119 43.478 0.00 0.00 0.00 4.18
121 122 4.476628 ACCCAAAATCAAATCTGCATCC 57.523 40.909 0.00 0.00 0.00 3.51
124 125 6.118170 TGAAAAACCCAAAATCAAATCTGCA 58.882 32.000 0.00 0.00 0.00 4.41
128 129 6.073819 CCGACTGAAAAACCCAAAATCAAATC 60.074 38.462 0.00 0.00 0.00 2.17
130 131 5.112686 CCGACTGAAAAACCCAAAATCAAA 58.887 37.500 0.00 0.00 0.00 2.69
131 132 4.688021 CCGACTGAAAAACCCAAAATCAA 58.312 39.130 0.00 0.00 0.00 2.57
132 133 3.491792 GCCGACTGAAAAACCCAAAATCA 60.492 43.478 0.00 0.00 0.00 2.57
133 134 3.057019 GCCGACTGAAAAACCCAAAATC 58.943 45.455 0.00 0.00 0.00 2.17
134 135 2.698274 AGCCGACTGAAAAACCCAAAAT 59.302 40.909 0.00 0.00 0.00 1.82
135 136 2.104170 AGCCGACTGAAAAACCCAAAA 58.896 42.857 0.00 0.00 0.00 2.44
136 137 1.770294 AGCCGACTGAAAAACCCAAA 58.230 45.000 0.00 0.00 0.00 3.28
137 138 1.770294 AAGCCGACTGAAAAACCCAA 58.230 45.000 0.00 0.00 0.00 4.12
138 139 2.105134 TCTAAGCCGACTGAAAAACCCA 59.895 45.455 0.00 0.00 0.00 4.51
139 140 2.774687 TCTAAGCCGACTGAAAAACCC 58.225 47.619 0.00 0.00 0.00 4.11
174 183 0.891904 TAAGGCCAACTCCAAACGCC 60.892 55.000 5.01 0.00 40.03 5.68
388 422 3.001406 GACGGTGGGTAGGTGGCT 61.001 66.667 0.00 0.00 0.00 4.75
419 453 1.001269 CCGGAAAGAAGGAACCCCC 60.001 63.158 0.00 0.00 0.00 5.40
541 613 1.904771 TGGACTTACCGGATGCTGG 59.095 57.895 9.46 0.00 42.61 4.85
591 663 3.731652 TGAAAATGCTTGGTTGACTGG 57.268 42.857 0.00 0.00 0.00 4.00
596 787 5.162794 TCGATGATTGAAAATGCTTGGTTG 58.837 37.500 0.00 0.00 0.00 3.77
618 810 3.814049 GCGTTGTGCTATCATGCTC 57.186 52.632 0.00 0.00 41.73 4.26
630 828 3.115554 GCAATTTTTCAGTCAGCGTTGT 58.884 40.909 0.00 0.00 0.00 3.32
645 843 4.513442 AGAATGATGCTGCATTGCAATTT 58.487 34.783 17.36 3.50 46.61 1.82
646 844 4.137116 AGAATGATGCTGCATTGCAATT 57.863 36.364 17.36 13.55 46.61 2.32
647 845 3.819564 AGAATGATGCTGCATTGCAAT 57.180 38.095 17.36 5.99 46.61 3.56
660 858 7.611079 CCTTCTTCCTCTTCAGAAAAGAATGAT 59.389 37.037 7.80 0.00 36.33 2.45
666 864 5.234466 TCCCTTCTTCCTCTTCAGAAAAG 57.766 43.478 0.00 0.00 0.00 2.27
669 867 3.054802 GCATCCCTTCTTCCTCTTCAGAA 60.055 47.826 0.00 0.00 0.00 3.02
670 868 2.503356 GCATCCCTTCTTCCTCTTCAGA 59.497 50.000 0.00 0.00 0.00 3.27
721 932 4.041723 CCCTTCAAACAAACGTCATGTTC 58.958 43.478 16.98 0.00 40.84 3.18
725 936 4.398319 AGATCCCTTCAAACAAACGTCAT 58.602 39.130 0.00 0.00 0.00 3.06
728 939 3.564225 GTGAGATCCCTTCAAACAAACGT 59.436 43.478 0.00 0.00 0.00 3.99
734 945 1.087501 GCGGTGAGATCCCTTCAAAC 58.912 55.000 0.00 0.00 0.00 2.93
752 967 1.006922 GCAAACAGCACAAGGGAGC 60.007 57.895 0.00 0.00 44.79 4.70
853 1162 0.380378 GCCAATGTGAACGTGTGTGT 59.620 50.000 0.00 0.00 0.00 3.72
871 1180 3.825160 TTGACTGGACACGGCAGGC 62.825 63.158 0.00 0.00 0.00 4.85
1005 1346 2.029020 ACAGAGCATACGCAAGACTGAA 60.029 45.455 0.00 0.00 42.27 3.02
1016 1357 4.260948 GGCTGAGCAAAATACAGAGCATAC 60.261 45.833 6.82 0.00 34.07 2.39
1018 1359 2.686915 GGCTGAGCAAAATACAGAGCAT 59.313 45.455 6.82 0.00 34.07 3.79
1165 1513 1.589716 AAGTCAAGCGAGCCATTGCC 61.590 55.000 0.00 0.00 38.69 4.52
1287 1635 2.893489 AGAAAGAAATGTCAGGTTGCCC 59.107 45.455 0.00 0.00 0.00 5.36
1395 1743 1.289160 TACCTTCCAGATTGCTGCCT 58.711 50.000 0.00 0.00 40.91 4.75
1526 1874 7.284944 AGAGGCTATTACGTGACAGTATAAGTT 59.715 37.037 0.00 0.00 0.00 2.66
1881 2229 5.450592 TGCTGCACACATTAAAGAATTCA 57.549 34.783 8.44 0.00 0.00 2.57
2098 2446 3.881220 TCATTCCTAAATCCAACCGACC 58.119 45.455 0.00 0.00 0.00 4.79
2233 2582 8.380742 TGTTCTAGTCTCCTGGAAAGATTAAT 57.619 34.615 0.00 0.00 39.54 1.40
2250 2599 5.099042 ACCCAAGCGATAAATGTTCTAGT 57.901 39.130 0.00 0.00 0.00 2.57
2442 2791 3.947834 GAGTAATGTCACCAATTGAGGGG 59.052 47.826 7.12 0.00 33.71 4.79
2533 2882 1.810755 GTTTAGTTCAAGAAGCCCCGG 59.189 52.381 0.00 0.00 0.00 5.73
2534 2883 2.779506 AGTTTAGTTCAAGAAGCCCCG 58.220 47.619 0.00 0.00 0.00 5.73
2565 2914 3.708451 TGGTACTGAGCCATCAAGACTA 58.292 45.455 0.00 0.00 34.23 2.59
2567 2916 3.550437 ATGGTACTGAGCCATCAAGAC 57.450 47.619 0.00 0.00 42.62 3.01
2593 2942 2.972713 AGAGTGGAGGACTAGCAAACAA 59.027 45.455 0.00 0.00 33.83 2.83
2603 2952 0.545548 ACCCAAGGAGAGTGGAGGAC 60.546 60.000 0.00 0.00 38.54 3.85
2799 3151 1.971167 GAATTCAGGCACGGCACCA 60.971 57.895 0.00 0.00 0.00 4.17
2964 3316 7.824289 GCTGGCCTAAAGGAATTTCTTATTTTT 59.176 33.333 3.32 0.00 37.39 1.94
2965 3317 7.038373 TGCTGGCCTAAAGGAATTTCTTATTTT 60.038 33.333 3.32 0.00 37.39 1.82
2966 3318 6.440328 TGCTGGCCTAAAGGAATTTCTTATTT 59.560 34.615 3.32 0.00 37.39 1.40
2967 3319 5.957774 TGCTGGCCTAAAGGAATTTCTTATT 59.042 36.000 3.32 0.00 37.39 1.40
2968 3320 5.518865 TGCTGGCCTAAAGGAATTTCTTAT 58.481 37.500 3.32 0.00 37.39 1.73
2969 3321 4.929479 TGCTGGCCTAAAGGAATTTCTTA 58.071 39.130 3.32 0.00 37.39 2.10
2970 3322 3.778265 TGCTGGCCTAAAGGAATTTCTT 58.222 40.909 3.32 0.00 37.39 2.52
2971 3323 3.456380 TGCTGGCCTAAAGGAATTTCT 57.544 42.857 3.32 0.00 37.39 2.52
2972 3324 4.743057 AATGCTGGCCTAAAGGAATTTC 57.257 40.909 3.32 0.00 37.39 2.17
2973 3325 4.405680 GGTAATGCTGGCCTAAAGGAATTT 59.594 41.667 3.32 0.00 37.39 1.82
2974 3326 3.960755 GGTAATGCTGGCCTAAAGGAATT 59.039 43.478 3.32 0.00 37.39 2.17
2975 3327 3.052944 TGGTAATGCTGGCCTAAAGGAAT 60.053 43.478 3.32 0.00 37.39 3.01
2976 3328 2.310349 TGGTAATGCTGGCCTAAAGGAA 59.690 45.455 3.32 0.00 37.39 3.36
2977 3329 1.919654 TGGTAATGCTGGCCTAAAGGA 59.080 47.619 3.32 0.00 37.39 3.36
2981 3333 3.088532 CAAACTGGTAATGCTGGCCTAA 58.911 45.455 3.32 0.00 0.00 2.69
3055 3461 0.246635 ACAATTAGCAGCGAGGTCGT 59.753 50.000 0.69 0.00 42.22 4.34
3100 3506 4.151883 AGCAGAAACCATAACAACACCAT 58.848 39.130 0.00 0.00 0.00 3.55
3225 3649 5.991933 ATGACACTCTCTTCAGCTTCTTA 57.008 39.130 0.00 0.00 0.00 2.10
3408 3832 3.317150 TCGTAGCACTTCACACTCAATG 58.683 45.455 0.00 0.00 0.00 2.82
3577 4001 4.273318 CCAAAGCTTAGCCCTTTATCTGT 58.727 43.478 0.00 0.00 31.70 3.41
3663 4087 2.837947 TCACAATGGATCAGAGGAGGT 58.162 47.619 0.00 0.00 0.00 3.85
3817 4241 1.880027 GTAAAACTCACCAGGTGCCAG 59.120 52.381 15.64 10.66 32.98 4.85
3936 4360 3.208594 ACTATACACATCGCCGTCTACA 58.791 45.455 0.00 0.00 0.00 2.74
3941 4365 2.933906 CCAAAACTATACACATCGCCGT 59.066 45.455 0.00 0.00 0.00 5.68
4056 4480 0.827925 TCTCTGCAACTCTGTCGGGT 60.828 55.000 0.00 0.00 0.00 5.28
4059 4483 3.229276 AGAATCTCTGCAACTCTGTCG 57.771 47.619 0.00 0.00 0.00 4.35
4233 4657 8.329203 ACAGTTAAAGAAAAGAGGCTCTAATG 57.671 34.615 19.07 11.21 0.00 1.90
4553 5010 9.669353 CATCAGGCTGTAAATTAAACATATCAC 57.331 33.333 15.27 0.00 0.00 3.06
4593 5106 7.879677 CAGGATGCAATACCTTAAGACATATCA 59.120 37.037 3.36 0.00 33.91 2.15
4646 5216 3.643595 TACATGCACTGGGGCTGCC 62.644 63.158 11.05 11.05 33.36 4.85
4647 5217 2.045045 TACATGCACTGGGGCTGC 60.045 61.111 0.00 0.00 35.03 5.25
4648 5218 2.117156 GCTACATGCACTGGGGCTG 61.117 63.158 0.00 0.00 42.31 4.85
4649 5219 2.262774 GAGCTACATGCACTGGGGCT 62.263 60.000 13.29 13.29 45.94 5.19
4650 5220 1.821332 GAGCTACATGCACTGGGGC 60.821 63.158 0.00 0.00 45.94 5.80
4651 5221 1.153086 GGAGCTACATGCACTGGGG 60.153 63.158 0.00 0.00 45.94 4.96
4652 5222 1.153086 GGGAGCTACATGCACTGGG 60.153 63.158 0.00 0.00 45.94 4.45
4653 5223 1.522355 CGGGAGCTACATGCACTGG 60.522 63.158 0.00 0.00 45.94 4.00
4654 5224 4.115279 CGGGAGCTACATGCACTG 57.885 61.111 0.00 0.00 45.94 3.66
4669 5239 3.052082 CAGACCCTGCACAAGCGG 61.052 66.667 0.00 0.00 46.23 5.52
4670 5240 3.052082 CCAGACCCTGCACAAGCG 61.052 66.667 0.00 0.00 46.23 4.68
4671 5241 2.674380 CCCAGACCCTGCACAAGC 60.674 66.667 0.00 0.00 42.57 4.01
4672 5242 2.034687 CCCCAGACCCTGCACAAG 59.965 66.667 0.00 0.00 0.00 3.16
4673 5243 2.067932 CTTCCCCAGACCCTGCACAA 62.068 60.000 0.00 0.00 0.00 3.33
4674 5244 2.449518 TTCCCCAGACCCTGCACA 60.450 61.111 0.00 0.00 0.00 4.57
4675 5245 2.352805 CTTCCCCAGACCCTGCAC 59.647 66.667 0.00 0.00 0.00 4.57
4676 5246 2.935481 CCTTCCCCAGACCCTGCA 60.935 66.667 0.00 0.00 0.00 4.41
4677 5247 3.732849 CCCTTCCCCAGACCCTGC 61.733 72.222 0.00 0.00 0.00 4.85
4678 5248 2.204151 ACCCTTCCCCAGACCCTG 60.204 66.667 0.00 0.00 0.00 4.45
4679 5249 2.125225 GACCCTTCCCCAGACCCT 59.875 66.667 0.00 0.00 0.00 4.34
4680 5250 3.015753 GGACCCTTCCCCAGACCC 61.016 72.222 0.00 0.00 35.57 4.46
4681 5251 3.400054 CGGACCCTTCCCCAGACC 61.400 72.222 0.00 0.00 38.99 3.85
4682 5252 2.284405 TCGGACCCTTCCCCAGAC 60.284 66.667 0.00 0.00 38.99 3.51
4683 5253 2.284405 GTCGGACCCTTCCCCAGA 60.284 66.667 0.00 0.00 38.99 3.86
4684 5254 3.400054 GGTCGGACCCTTCCCCAG 61.400 72.222 16.55 0.00 38.99 4.45
4685 5255 4.257810 TGGTCGGACCCTTCCCCA 62.258 66.667 23.81 0.69 38.99 4.96
4686 5256 3.714001 GTGGTCGGACCCTTCCCC 61.714 72.222 23.81 0.00 38.99 4.81
4687 5257 1.775934 AAAGTGGTCGGACCCTTCCC 61.776 60.000 23.81 7.17 38.99 3.97
4688 5258 0.605589 CAAAGTGGTCGGACCCTTCC 60.606 60.000 23.81 9.51 37.50 3.46
4689 5259 0.605589 CCAAAGTGGTCGGACCCTTC 60.606 60.000 23.81 13.97 37.50 3.46
4690 5260 1.454539 CCAAAGTGGTCGGACCCTT 59.545 57.895 23.81 21.08 37.50 3.95
4691 5261 2.526046 CCCAAAGTGGTCGGACCCT 61.526 63.158 23.81 16.82 37.50 4.34
4692 5262 2.033602 CCCAAAGTGGTCGGACCC 59.966 66.667 23.81 14.91 37.50 4.46
4693 5263 1.302271 GACCCAAAGTGGTCGGACC 60.302 63.158 20.36 20.36 44.98 4.46
4694 5264 4.373771 GACCCAAAGTGGTCGGAC 57.626 61.111 0.00 0.00 44.98 4.79
4699 5269 3.867216 GCGTACAATAGACCCAAAGTGGT 60.867 47.826 0.00 0.00 42.79 4.16
4700 5270 2.676342 GCGTACAATAGACCCAAAGTGG 59.324 50.000 0.00 0.00 37.25 4.00
4701 5271 3.331150 TGCGTACAATAGACCCAAAGTG 58.669 45.455 0.00 0.00 0.00 3.16
4702 5272 3.596214 CTGCGTACAATAGACCCAAAGT 58.404 45.455 0.00 0.00 0.00 2.66
4703 5273 2.351726 GCTGCGTACAATAGACCCAAAG 59.648 50.000 0.00 0.00 0.00 2.77
4704 5274 2.352388 GCTGCGTACAATAGACCCAAA 58.648 47.619 0.00 0.00 0.00 3.28
4705 5275 1.406341 GGCTGCGTACAATAGACCCAA 60.406 52.381 0.00 0.00 0.00 4.12
4706 5276 0.177141 GGCTGCGTACAATAGACCCA 59.823 55.000 0.00 0.00 0.00 4.51
4707 5277 0.464452 AGGCTGCGTACAATAGACCC 59.536 55.000 0.00 0.00 0.00 4.46
4708 5278 2.311124 AAGGCTGCGTACAATAGACC 57.689 50.000 0.00 0.00 0.00 3.85
4709 5279 2.608090 GGAAAGGCTGCGTACAATAGAC 59.392 50.000 0.00 0.00 0.00 2.59
4710 5280 2.419574 GGGAAAGGCTGCGTACAATAGA 60.420 50.000 0.00 0.00 0.00 1.98
4711 5281 1.940613 GGGAAAGGCTGCGTACAATAG 59.059 52.381 0.00 0.00 0.00 1.73
4712 5282 1.557832 AGGGAAAGGCTGCGTACAATA 59.442 47.619 0.00 0.00 0.00 1.90
4713 5283 0.328258 AGGGAAAGGCTGCGTACAAT 59.672 50.000 0.00 0.00 0.00 2.71
4714 5284 0.978151 TAGGGAAAGGCTGCGTACAA 59.022 50.000 0.00 0.00 0.00 2.41
4715 5285 0.248289 GTAGGGAAAGGCTGCGTACA 59.752 55.000 0.00 0.00 36.89 2.90
4716 5286 0.248289 TGTAGGGAAAGGCTGCGTAC 59.752 55.000 0.00 0.00 37.28 3.67
4717 5287 1.200519 ATGTAGGGAAAGGCTGCGTA 58.799 50.000 0.00 0.00 0.00 4.42
4718 5288 0.328258 AATGTAGGGAAAGGCTGCGT 59.672 50.000 0.00 0.00 0.00 5.24
4719 5289 1.401905 GAAATGTAGGGAAAGGCTGCG 59.598 52.381 0.00 0.00 0.00 5.18
4720 5290 2.424956 CAGAAATGTAGGGAAAGGCTGC 59.575 50.000 0.00 0.00 0.00 5.25
4721 5291 2.424956 GCAGAAATGTAGGGAAAGGCTG 59.575 50.000 0.00 0.00 0.00 4.85
4722 5292 2.041620 TGCAGAAATGTAGGGAAAGGCT 59.958 45.455 0.00 0.00 0.00 4.58
4723 5293 2.446435 TGCAGAAATGTAGGGAAAGGC 58.554 47.619 0.00 0.00 0.00 4.35
4724 5294 4.335416 TCTTGCAGAAATGTAGGGAAAGG 58.665 43.478 0.00 0.00 0.00 3.11
4725 5295 4.397417 CCTCTTGCAGAAATGTAGGGAAAG 59.603 45.833 0.00 0.00 0.00 2.62
4726 5296 4.335416 CCTCTTGCAGAAATGTAGGGAAA 58.665 43.478 0.00 0.00 0.00 3.13
4727 5297 3.873801 GCCTCTTGCAGAAATGTAGGGAA 60.874 47.826 0.00 0.00 40.77 3.97
4728 5298 2.356125 GCCTCTTGCAGAAATGTAGGGA 60.356 50.000 0.00 0.00 40.77 4.20
4729 5299 2.019984 GCCTCTTGCAGAAATGTAGGG 58.980 52.381 0.00 0.00 40.77 3.53
4730 5300 2.681848 CAGCCTCTTGCAGAAATGTAGG 59.318 50.000 0.00 0.00 44.83 3.18
4731 5301 3.341823 ACAGCCTCTTGCAGAAATGTAG 58.658 45.455 0.00 0.00 44.83 2.74
4732 5302 3.423539 ACAGCCTCTTGCAGAAATGTA 57.576 42.857 0.00 0.00 44.83 2.29
4733 5303 2.283145 ACAGCCTCTTGCAGAAATGT 57.717 45.000 0.00 0.00 44.83 2.71
4734 5304 3.572584 GAAACAGCCTCTTGCAGAAATG 58.427 45.455 0.00 0.00 44.83 2.32
4735 5305 2.560105 GGAAACAGCCTCTTGCAGAAAT 59.440 45.455 0.00 0.00 44.83 2.17
4736 5306 1.956477 GGAAACAGCCTCTTGCAGAAA 59.044 47.619 0.00 0.00 44.83 2.52
4737 5307 1.133823 TGGAAACAGCCTCTTGCAGAA 60.134 47.619 0.00 0.00 44.83 3.02
4738 5308 0.473755 TGGAAACAGCCTCTTGCAGA 59.526 50.000 0.00 0.00 44.83 4.26
4739 5309 3.025924 TGGAAACAGCCTCTTGCAG 57.974 52.632 0.00 0.00 44.83 4.41
4750 5320 1.476110 CGGGTTCAAGTCCTGGAAACA 60.476 52.381 0.00 0.00 32.36 2.83
4751 5321 1.235724 CGGGTTCAAGTCCTGGAAAC 58.764 55.000 0.00 0.00 0.00 2.78
4752 5322 0.841289 ACGGGTTCAAGTCCTGGAAA 59.159 50.000 0.00 0.00 35.79 3.13
4753 5323 0.107831 CACGGGTTCAAGTCCTGGAA 59.892 55.000 0.00 0.00 35.79 3.53
4754 5324 0.761323 TCACGGGTTCAAGTCCTGGA 60.761 55.000 0.00 0.00 35.79 3.86
4755 5325 0.602905 GTCACGGGTTCAAGTCCTGG 60.603 60.000 0.00 0.00 35.79 4.45
4756 5326 0.602905 GGTCACGGGTTCAAGTCCTG 60.603 60.000 0.00 0.00 37.36 3.86
4757 5327 0.763223 AGGTCACGGGTTCAAGTCCT 60.763 55.000 0.00 0.00 0.00 3.85
4758 5328 0.320508 GAGGTCACGGGTTCAAGTCC 60.321 60.000 0.00 0.00 0.00 3.85
4759 5329 0.391597 TGAGGTCACGGGTTCAAGTC 59.608 55.000 0.00 0.00 0.00 3.01
4760 5330 1.056660 ATGAGGTCACGGGTTCAAGT 58.943 50.000 0.00 0.00 0.00 3.16
4761 5331 1.442769 CATGAGGTCACGGGTTCAAG 58.557 55.000 0.00 0.00 0.00 3.02
4762 5332 0.036164 CCATGAGGTCACGGGTTCAA 59.964 55.000 0.00 0.00 0.00 2.69
4763 5333 1.676968 CCATGAGGTCACGGGTTCA 59.323 57.895 0.00 0.00 0.00 3.18
4764 5334 4.617875 CCATGAGGTCACGGGTTC 57.382 61.111 0.00 0.00 0.00 3.62
4774 5344 0.883833 GTTGCCTTGTGACCATGAGG 59.116 55.000 0.00 0.00 42.21 3.86
4775 5345 1.538512 CTGTTGCCTTGTGACCATGAG 59.461 52.381 0.00 0.00 0.00 2.90
4776 5346 1.608055 CTGTTGCCTTGTGACCATGA 58.392 50.000 0.00 0.00 0.00 3.07
4777 5347 0.038892 GCTGTTGCCTTGTGACCATG 60.039 55.000 0.00 0.00 0.00 3.66
4778 5348 0.178981 AGCTGTTGCCTTGTGACCAT 60.179 50.000 0.00 0.00 40.80 3.55
4779 5349 0.395586 AAGCTGTTGCCTTGTGACCA 60.396 50.000 0.00 0.00 40.80 4.02
4780 5350 0.746659 AAAGCTGTTGCCTTGTGACC 59.253 50.000 0.00 0.00 40.80 4.02
4781 5351 2.287608 GGTAAAGCTGTTGCCTTGTGAC 60.288 50.000 7.98 0.00 40.80 3.67
4782 5352 1.953686 GGTAAAGCTGTTGCCTTGTGA 59.046 47.619 7.98 0.00 40.80 3.58
4783 5353 1.680735 TGGTAAAGCTGTTGCCTTGTG 59.319 47.619 13.72 0.00 40.80 3.33
4784 5354 1.681264 GTGGTAAAGCTGTTGCCTTGT 59.319 47.619 13.72 0.00 40.80 3.16
4785 5355 1.956477 AGTGGTAAAGCTGTTGCCTTG 59.044 47.619 13.72 0.00 40.80 3.61
4786 5356 1.956477 CAGTGGTAAAGCTGTTGCCTT 59.044 47.619 13.72 0.00 40.80 4.35
4787 5357 1.609208 CAGTGGTAAAGCTGTTGCCT 58.391 50.000 13.72 0.00 40.80 4.75
4788 5358 0.039165 GCAGTGGTAAAGCTGTTGCC 60.039 55.000 8.21 8.21 40.80 4.52
4789 5359 0.385974 CGCAGTGGTAAAGCTGTTGC 60.386 55.000 0.00 0.00 40.05 4.17
4790 5360 0.385974 GCGCAGTGGTAAAGCTGTTG 60.386 55.000 0.30 0.00 35.33 3.33
4791 5361 1.515521 GGCGCAGTGGTAAAGCTGTT 61.516 55.000 10.83 0.00 35.33 3.16
4792 5362 1.966451 GGCGCAGTGGTAAAGCTGT 60.966 57.895 10.83 0.00 35.33 4.40
4793 5363 1.514678 TTGGCGCAGTGGTAAAGCTG 61.515 55.000 10.83 0.00 35.93 4.24
4794 5364 1.228124 TTGGCGCAGTGGTAAAGCT 60.228 52.632 10.83 0.00 0.00 3.74
4795 5365 1.210155 CTTGGCGCAGTGGTAAAGC 59.790 57.895 10.83 0.00 0.00 3.51
4796 5366 1.875963 CCTTGGCGCAGTGGTAAAG 59.124 57.895 10.83 0.71 0.00 1.85
4797 5367 2.265182 GCCTTGGCGCAGTGGTAAA 61.265 57.895 10.83 0.00 0.00 2.01
4798 5368 2.671619 GCCTTGGCGCAGTGGTAA 60.672 61.111 10.83 0.00 0.00 2.85
4799 5369 3.605749 GAGCCTTGGCGCAGTGGTA 62.606 63.158 10.83 0.00 0.00 3.25
4807 5377 3.984193 CTGAAGGGGAGCCTTGGCG 62.984 68.421 5.95 0.00 0.00 5.69
4808 5378 1.562672 TACTGAAGGGGAGCCTTGGC 61.563 60.000 2.97 2.97 0.00 4.52
4809 5379 0.543749 CTACTGAAGGGGAGCCTTGG 59.456 60.000 0.00 0.00 0.00 3.61
4810 5380 0.107459 GCTACTGAAGGGGAGCCTTG 60.107 60.000 0.00 0.00 0.00 3.61
4811 5381 2.302019 GCTACTGAAGGGGAGCCTT 58.698 57.895 0.00 0.00 0.00 4.35
4812 5382 4.058434 GCTACTGAAGGGGAGCCT 57.942 61.111 0.00 0.00 0.00 4.58
4814 5384 0.548510 ATTGGCTACTGAAGGGGAGC 59.451 55.000 0.00 0.00 0.00 4.70
4815 5385 4.713792 ATAATTGGCTACTGAAGGGGAG 57.286 45.455 0.00 0.00 0.00 4.30
4816 5386 6.159751 ACTTTATAATTGGCTACTGAAGGGGA 59.840 38.462 0.00 0.00 0.00 4.81
4817 5387 6.365520 ACTTTATAATTGGCTACTGAAGGGG 58.634 40.000 0.00 0.00 0.00 4.79
4818 5388 8.974060 TTACTTTATAATTGGCTACTGAAGGG 57.026 34.615 0.00 0.00 0.00 3.95
5151 5776 9.002600 GTGCAATGATGGATCATACAGTATTAA 57.997 33.333 2.53 0.00 46.22 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.