AutoCloner

Multiple sequence alignment - TraesCS2B01G079000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2B01G079000	chr2B	100.000	2765	0	0	1	2765	44265249	44268013	0.000000e+00	5107
1	TraesCS2B01G079000	chr2B	95.113	1821	84	5	948	2765	465677951	465679769	0.000000e+00	2865
2	TraesCS2B01G079000	chr2B	92.537	201	15	0	745	945	465669407	465669607	3.480000e-74	289
3	TraesCS2B01G079000	chr2B	75.556	360	80	8	2408	2763	513098451	513098806	1.320000e-38	171
4	TraesCS2B01G079000	chr2B	82.418	182	25	6	23	201	44285130	44285307	4.770000e-33	152
5	TraesCS2B01G079000	chr4B	88.131	2022	203	17	746	2763	11590046	11588058	0.000000e+00	2370
6	TraesCS2B01G079000	chr4B	77.551	490	93	15	2267	2746	24638416	24637934	2.100000e-71	279
7	TraesCS2B01G079000	chr7B	92.529	1044	73	5	743	1782	586062998	586061956	0.000000e+00	1491
8	TraesCS2B01G079000	chr7B	90.414	991	91	4	1778	2765	586060390	586059401	0.000000e+00	1301
9	TraesCS2B01G079000	chr6B	82.602	1230	194	16	744	1958	539721110	539719886	0.000000e+00	1068
10	TraesCS2B01G079000	chr7D	94.349	407	23	0	318	724	563391497	563391091	2.340000e-175	625
11	TraesCS2B01G079000	chr3D	93.494	415	24	3	311	724	558705104	558705516	5.060000e-172	614
12	TraesCS2B01G079000	chr6D	76.119	335	76	4	2401	2733	148002867	148002535	3.660000e-39	172

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2B01G079000	chr2B	44265249	44268013	2764	False	5107	5107	100.0000	1	2765	1	chr2B.!!$F1	2764
1	TraesCS2B01G079000	chr2B	465677951	465679769	1818	False	2865	2865	95.1130	948	2765	1	chr2B.!!$F4	1817
2	TraesCS2B01G079000	chr4B	11588058	11590046	1988	True	2370	2370	88.1310	746	2763	1	chr4B.!!$R1	2017
3	TraesCS2B01G079000	chr7B	586059401	586062998	3597	True	1396	1491	91.4715	743	2765	2	chr7B.!!$R1	2022
4	TraesCS2B01G079000	chr6B	539719886	539721110	1224	True	1068	1068	82.6020	744	1958	1	chr6B.!!$R1	1214

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
420	421	0.029681	ACCCTGGTCTGCCATCCTAT	60.03	55.0	0.0	0.0	45.05	2.57	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2051	3645	0.099259	CAGCATGTACCACCATTGCG	59.901	55.0	0.0	0.0	0.0	4.85	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	2.863740	GCTTTTCCCTTTGTTTTCGTGG	59.136	45.455	0.00	0.00	0.00	4.94
22	23	3.429684	GCTTTTCCCTTTGTTTTCGTGGA	60.430	43.478	0.00	0.00	0.00	4.02
23	24	4.739436	GCTTTTCCCTTTGTTTTCGTGGAT	60.739	41.667	0.00	0.00	0.00	3.41
24	25	5.508320	GCTTTTCCCTTTGTTTTCGTGGATA	60.508	40.000	0.00	0.00	0.00	2.59
25	26	5.699097	TTTCCCTTTGTTTTCGTGGATAG	57.301	39.130	0.00	0.00	0.00	2.08
26	27	4.627284	TCCCTTTGTTTTCGTGGATAGA	57.373	40.909	0.00	0.00	0.00	1.98
27	28	5.174037	TCCCTTTGTTTTCGTGGATAGAT	57.826	39.130	0.00	0.00	0.00	1.98
28	29	6.302535	TCCCTTTGTTTTCGTGGATAGATA	57.697	37.500	0.00	0.00	0.00	1.98
29	30	6.713276	TCCCTTTGTTTTCGTGGATAGATAA	58.287	36.000	0.00	0.00	0.00	1.75
30	31	6.821665	TCCCTTTGTTTTCGTGGATAGATAAG	59.178	38.462	0.00	0.00	0.00	1.73
31	32	6.598064	CCCTTTGTTTTCGTGGATAGATAAGT	59.402	38.462	0.00	0.00	0.00	2.24
32	33	7.767198	CCCTTTGTTTTCGTGGATAGATAAGTA	59.233	37.037	0.00	0.00	0.00	2.24
33	34	9.326413	CCTTTGTTTTCGTGGATAGATAAGTAT	57.674	33.333	0.00	0.00	0.00	2.12
35	36	9.661563	TTTGTTTTCGTGGATAGATAAGTATGT	57.338	29.630	0.00	0.00	0.00	2.29
40	41	9.961265	TTTCGTGGATAGATAAGTATGTAAGTG	57.039	33.333	0.00	0.00	0.00	3.16
41	42	8.687292	TCGTGGATAGATAAGTATGTAAGTGT	57.313	34.615	0.00	0.00	0.00	3.55
42	43	9.128404	TCGTGGATAGATAAGTATGTAAGTGTT	57.872	33.333	0.00	0.00	0.00	3.32
43	44	9.181805	CGTGGATAGATAAGTATGTAAGTGTTG	57.818	37.037	0.00	0.00	0.00	3.33
59	60	9.984190	TGTAAGTGTTGTTTTTAACTTTTTCCT	57.016	25.926	0.00	0.00	34.76	3.36
62	63	8.317891	AGTGTTGTTTTTAACTTTTTCCTTGG	57.682	30.769	0.00	0.00	0.00	3.61
63	64	7.934665	AGTGTTGTTTTTAACTTTTTCCTTGGT	59.065	29.630	0.00	0.00	0.00	3.67
64	65	8.561212	GTGTTGTTTTTAACTTTTTCCTTGGTT	58.439	29.630	0.00	0.00	0.00	3.67
65	66	9.121658	TGTTGTTTTTAACTTTTTCCTTGGTTT	57.878	25.926	0.00	0.00	0.00	3.27
66	67	9.601971	GTTGTTTTTAACTTTTTCCTTGGTTTC	57.398	29.630	0.00	0.00	0.00	2.78
67	68	9.562408	TTGTTTTTAACTTTTTCCTTGGTTTCT	57.438	25.926	0.00	0.00	0.00	2.52
68	69	9.210329	TGTTTTTAACTTTTTCCTTGGTTTCTC	57.790	29.630	0.00	0.00	0.00	2.87
69	70	9.431887	GTTTTTAACTTTTTCCTTGGTTTCTCT	57.568	29.630	0.00	0.00	0.00	3.10
71	72	8.996024	TTTAACTTTTTCCTTGGTTTCTCTTG	57.004	30.769	0.00	0.00	0.00	3.02
72	73	6.605471	AACTTTTTCCTTGGTTTCTCTTGT	57.395	33.333	0.00	0.00	0.00	3.16
73	74	7.712204	AACTTTTTCCTTGGTTTCTCTTGTA	57.288	32.000	0.00	0.00	0.00	2.41
74	75	7.712204	ACTTTTTCCTTGGTTTCTCTTGTAA	57.288	32.000	0.00	0.00	0.00	2.41
75	76	8.129496	ACTTTTTCCTTGGTTTCTCTTGTAAA	57.871	30.769	0.00	0.00	0.00	2.01
76	77	8.758829	ACTTTTTCCTTGGTTTCTCTTGTAAAT	58.241	29.630	0.00	0.00	0.00	1.40
102	103	6.434018	TTTTGCTTCCTTTTGTTTTCATGG	57.566	33.333	0.00	0.00	0.00	3.66
103	104	5.350504	TTGCTTCCTTTTGTTTTCATGGA	57.649	34.783	0.00	0.00	0.00	3.41
104	105	5.350504	TGCTTCCTTTTGTTTTCATGGAA	57.649	34.783	0.00	0.00	35.00	3.53
105	106	5.927819	TGCTTCCTTTTGTTTTCATGGAAT	58.072	33.333	0.00	0.00	35.38	3.01
106	107	5.990996	TGCTTCCTTTTGTTTTCATGGAATC	59.009	36.000	0.00	0.00	35.38	2.52
107	108	5.990996	GCTTCCTTTTGTTTTCATGGAATCA	59.009	36.000	0.00	0.00	35.38	2.57
108	109	6.482973	GCTTCCTTTTGTTTTCATGGAATCAA	59.517	34.615	6.18	6.18	35.38	2.57
109	110	7.307573	GCTTCCTTTTGTTTTCATGGAATCAAG	60.308	37.037	9.61	1.22	35.38	3.02
110	111	6.523840	TCCTTTTGTTTTCATGGAATCAAGG	58.476	36.000	9.61	8.99	0.00	3.61
111	112	6.326064	TCCTTTTGTTTTCATGGAATCAAGGA	59.674	34.615	11.80	11.80	0.00	3.36
112	113	6.424812	CCTTTTGTTTTCATGGAATCAAGGAC	59.575	38.462	9.61	0.00	0.00	3.85
113	114	6.729690	TTTGTTTTCATGGAATCAAGGACT	57.270	33.333	9.61	0.00	0.00	3.85
114	115	7.831691	TTTGTTTTCATGGAATCAAGGACTA	57.168	32.000	9.61	0.00	0.00	2.59
115	116	8.421249	TTTGTTTTCATGGAATCAAGGACTAT	57.579	30.769	9.61	0.00	0.00	2.12
116	117	9.527157	TTTGTTTTCATGGAATCAAGGACTATA	57.473	29.630	9.61	0.00	0.00	1.31
117	118	8.737168	TGTTTTCATGGAATCAAGGACTATAG	57.263	34.615	0.00	0.00	0.00	1.31
118	119	8.548025	TGTTTTCATGGAATCAAGGACTATAGA	58.452	33.333	6.78	0.00	0.00	1.98
119	120	9.050601	GTTTTCATGGAATCAAGGACTATAGAG	57.949	37.037	6.78	0.00	0.00	2.43
120	121	6.352016	TCATGGAATCAAGGACTATAGAGC	57.648	41.667	6.78	0.00	0.00	4.09
121	122	6.080682	TCATGGAATCAAGGACTATAGAGCT	58.919	40.000	6.78	0.00	0.00	4.09
122	123	5.798125	TGGAATCAAGGACTATAGAGCTG	57.202	43.478	6.78	0.00	0.00	4.24
123	124	5.211973	TGGAATCAAGGACTATAGAGCTGT	58.788	41.667	6.78	0.00	0.00	4.40
124	125	5.663106	TGGAATCAAGGACTATAGAGCTGTT	59.337	40.000	6.78	0.00	0.00	3.16
125	126	5.988561	GGAATCAAGGACTATAGAGCTGTTG	59.011	44.000	6.78	6.69	0.00	3.33
126	127	4.392921	TCAAGGACTATAGAGCTGTTGC	57.607	45.455	6.78	0.00	40.05	4.17
141	142	4.755411	GCTGTTGCTCCATAGTAGTTACA	58.245	43.478	0.00	0.00	36.03	2.41
142	143	5.175859	GCTGTTGCTCCATAGTAGTTACAA	58.824	41.667	0.00	0.00	36.03	2.41
143	144	5.642063	GCTGTTGCTCCATAGTAGTTACAAA	59.358	40.000	0.00	0.00	36.03	2.83
144	145	6.148811	GCTGTTGCTCCATAGTAGTTACAAAA	59.851	38.462	0.00	0.00	36.03	2.44
145	146	7.308348	GCTGTTGCTCCATAGTAGTTACAAAAA	60.308	37.037	0.00	0.00	36.03	1.94
146	147	7.867752	TGTTGCTCCATAGTAGTTACAAAAAC	58.132	34.615	0.00	0.00	0.00	2.43
147	148	7.040961	TGTTGCTCCATAGTAGTTACAAAAACC	60.041	37.037	0.00	0.00	0.00	3.27
148	149	5.941647	TGCTCCATAGTAGTTACAAAAACCC	59.058	40.000	0.00	0.00	0.00	4.11
149	150	6.178324	GCTCCATAGTAGTTACAAAAACCCT	58.822	40.000	0.00	0.00	0.00	4.34
150	151	7.038160	TGCTCCATAGTAGTTACAAAAACCCTA	60.038	37.037	0.00	0.00	0.00	3.53
151	152	7.494952	GCTCCATAGTAGTTACAAAAACCCTAG	59.505	40.741	0.00	0.00	0.00	3.02
152	153	7.854337	TCCATAGTAGTTACAAAAACCCTAGG	58.146	38.462	0.06	0.06	0.00	3.02
153	154	7.458806	TCCATAGTAGTTACAAAAACCCTAGGT	59.541	37.037	8.29	0.00	37.65	3.08
170	171	8.777578	ACCCTAGGTTTTTCTTTATTTTCACT	57.222	30.769	8.29	0.00	27.29	3.41
171	172	9.871175	ACCCTAGGTTTTTCTTTATTTTCACTA	57.129	29.630	8.29	0.00	27.29	2.74
188	189	9.975218	ATTTTCACTAGTACCATTACAATCCTT	57.025	29.630	0.00	0.00	0.00	3.36
189	190	9.444600	TTTTCACTAGTACCATTACAATCCTTC	57.555	33.333	0.00	0.00	0.00	3.46
190	191	7.727578	TCACTAGTACCATTACAATCCTTCA	57.272	36.000	0.00	0.00	0.00	3.02
191	192	7.553334	TCACTAGTACCATTACAATCCTTCAC	58.447	38.462	0.00	0.00	0.00	3.18
192	193	7.179516	TCACTAGTACCATTACAATCCTTCACA	59.820	37.037	0.00	0.00	0.00	3.58
193	194	7.822334	CACTAGTACCATTACAATCCTTCACAA	59.178	37.037	0.00	0.00	0.00	3.33
194	195	8.380099	ACTAGTACCATTACAATCCTTCACAAA	58.620	33.333	0.00	0.00	0.00	2.83
195	196	9.396022	CTAGTACCATTACAATCCTTCACAAAT	57.604	33.333	0.00	0.00	0.00	2.32
197	198	9.396022	AGTACCATTACAATCCTTCACAAATAG	57.604	33.333	0.00	0.00	0.00	1.73
198	199	7.100458	ACCATTACAATCCTTCACAAATAGC	57.900	36.000	0.00	0.00	0.00	2.97
199	200	6.891908	ACCATTACAATCCTTCACAAATAGCT	59.108	34.615	0.00	0.00	0.00	3.32
200	201	7.067494	ACCATTACAATCCTTCACAAATAGCTC	59.933	37.037	0.00	0.00	0.00	4.09
201	202	7.067372	CCATTACAATCCTTCACAAATAGCTCA	59.933	37.037	0.00	0.00	0.00	4.26
202	203	7.615582	TTACAATCCTTCACAAATAGCTCAG	57.384	36.000	0.00	0.00	0.00	3.35
203	204	4.946157	ACAATCCTTCACAAATAGCTCAGG	59.054	41.667	0.00	0.00	0.00	3.86
204	205	2.991250	TCCTTCACAAATAGCTCAGGC	58.009	47.619	0.00	0.00	39.06	4.85
205	206	2.305635	TCCTTCACAAATAGCTCAGGCA	59.694	45.455	0.00	0.00	41.70	4.75
206	207	3.084039	CCTTCACAAATAGCTCAGGCAA	58.916	45.455	0.00	0.00	41.70	4.52
207	208	3.507233	CCTTCACAAATAGCTCAGGCAAA	59.493	43.478	0.00	0.00	41.70	3.68
208	209	4.022068	CCTTCACAAATAGCTCAGGCAAAA	60.022	41.667	0.00	0.00	41.70	2.44
209	210	4.771590	TCACAAATAGCTCAGGCAAAAG	57.228	40.909	0.00	0.00	41.70	2.27
210	211	4.144297	TCACAAATAGCTCAGGCAAAAGT	58.856	39.130	0.00	0.00	41.70	2.66
211	212	4.584325	TCACAAATAGCTCAGGCAAAAGTT	59.416	37.500	0.00	0.00	41.70	2.66
212	213	4.919754	CACAAATAGCTCAGGCAAAAGTTC	59.080	41.667	0.00	0.00	41.70	3.01
213	214	4.021981	ACAAATAGCTCAGGCAAAAGTTCC	60.022	41.667	0.00	0.00	41.70	3.62
214	215	2.949177	TAGCTCAGGCAAAAGTTCCA	57.051	45.000	0.00	0.00	41.70	3.53
215	216	2.299326	AGCTCAGGCAAAAGTTCCAT	57.701	45.000	0.00	0.00	41.70	3.41
216	217	3.439857	AGCTCAGGCAAAAGTTCCATA	57.560	42.857	0.00	0.00	41.70	2.74
217	218	3.766545	AGCTCAGGCAAAAGTTCCATAA	58.233	40.909	0.00	0.00	41.70	1.90
218	219	4.347607	AGCTCAGGCAAAAGTTCCATAAT	58.652	39.130	0.00	0.00	41.70	1.28
219	220	5.509498	AGCTCAGGCAAAAGTTCCATAATA	58.491	37.500	0.00	0.00	41.70	0.98
220	221	5.951747	AGCTCAGGCAAAAGTTCCATAATAA	59.048	36.000	0.00	0.00	41.70	1.40
221	222	6.096001	AGCTCAGGCAAAAGTTCCATAATAAG	59.904	38.462	0.00	0.00	41.70	1.73
222	223	6.127619	GCTCAGGCAAAAGTTCCATAATAAGT	60.128	38.462	0.00	0.00	38.54	2.24
223	224	7.067008	GCTCAGGCAAAAGTTCCATAATAAGTA	59.933	37.037	0.00	0.00	38.54	2.24
224	225	9.125026	CTCAGGCAAAAGTTCCATAATAAGTAT	57.875	33.333	0.00	0.00	0.00	2.12
225	226	9.474313	TCAGGCAAAAGTTCCATAATAAGTATT	57.526	29.630	0.00	0.00	0.00	1.89
226	227	9.520204	CAGGCAAAAGTTCCATAATAAGTATTG	57.480	33.333	0.00	0.00	0.00	1.90
227	228	9.474313	AGGCAAAAGTTCCATAATAAGTATTGA	57.526	29.630	0.00	0.00	0.00	2.57
234	235	9.632638	AGTTCCATAATAAGTATTGAATGCTGT	57.367	29.630	0.00	0.00	29.28	4.40
235	236	9.884465	GTTCCATAATAAGTATTGAATGCTGTC	57.116	33.333	0.00	0.00	29.28	3.51
236	237	8.310406	TCCATAATAAGTATTGAATGCTGTCG	57.690	34.615	0.00	0.00	0.00	4.35
237	238	7.017645	CCATAATAAGTATTGAATGCTGTCGC	58.982	38.462	0.00	0.00	0.00	5.19
238	239	7.095060	CCATAATAAGTATTGAATGCTGTCGCT	60.095	37.037	0.00	0.00	36.97	4.93
239	240	8.925700	CATAATAAGTATTGAATGCTGTCGCTA	58.074	33.333	0.00	0.00	36.97	4.26
240	241	7.969536	AATAAGTATTGAATGCTGTCGCTAT	57.030	32.000	0.00	0.00	36.97	2.97
242	243	9.658799	AATAAGTATTGAATGCTGTCGCTATAT	57.341	29.630	0.00	0.00	36.97	0.86
243	244	7.588143	AAGTATTGAATGCTGTCGCTATATC	57.412	36.000	0.00	0.00	36.97	1.63
244	245	5.802451	AGTATTGAATGCTGTCGCTATATCG	59.198	40.000	0.00	0.00	36.97	2.92
245	246	3.915437	TGAATGCTGTCGCTATATCGA	57.085	42.857	0.00	0.00	36.97	3.59
246	247	3.826466	TGAATGCTGTCGCTATATCGAG	58.174	45.455	0.00	0.00	39.34	4.04
247	248	3.253432	TGAATGCTGTCGCTATATCGAGT	59.747	43.478	0.00	0.00	39.34	4.18
248	249	3.924918	ATGCTGTCGCTATATCGAGTT	57.075	42.857	0.00	0.00	39.34	3.01
249	250	3.269486	TGCTGTCGCTATATCGAGTTC	57.731	47.619	0.00	0.00	39.34	3.01
250	251	2.616842	TGCTGTCGCTATATCGAGTTCA	59.383	45.455	0.00	0.00	39.34	3.18
251	252	3.230355	GCTGTCGCTATATCGAGTTCAG	58.770	50.000	0.00	5.04	39.34	3.02
252	253	3.304123	GCTGTCGCTATATCGAGTTCAGT	60.304	47.826	13.33	0.00	39.34	3.41
253	254	4.790123	GCTGTCGCTATATCGAGTTCAGTT	60.790	45.833	13.33	0.00	39.34	3.16
254	255	5.560375	GCTGTCGCTATATCGAGTTCAGTTA	60.560	44.000	13.33	0.00	39.34	2.24
255	256	5.986936	TGTCGCTATATCGAGTTCAGTTAG	58.013	41.667	0.00	0.00	39.34	2.34
256	257	5.756833	TGTCGCTATATCGAGTTCAGTTAGA	59.243	40.000	0.00	0.00	39.34	2.10
257	258	6.427242	TGTCGCTATATCGAGTTCAGTTAGAT	59.573	38.462	0.00	0.00	39.34	1.98
258	259	7.041303	TGTCGCTATATCGAGTTCAGTTAGATT	60.041	37.037	0.00	0.00	39.34	2.40
259	260	7.479291	GTCGCTATATCGAGTTCAGTTAGATTC	59.521	40.741	0.00	0.00	39.34	2.52
260	261	7.388224	TCGCTATATCGAGTTCAGTTAGATTCT	59.612	37.037	0.00	0.00	34.09	2.40
261	262	8.018520	CGCTATATCGAGTTCAGTTAGATTCTT	58.981	37.037	0.00	0.00	0.00	2.52
290	291	5.891451	ACTGACCAACAAAACTTCTTTAGC	58.109	37.500	0.00	0.00	0.00	3.09
291	292	5.417580	ACTGACCAACAAAACTTCTTTAGCA	59.582	36.000	0.00	0.00	0.00	3.49
292	293	6.071616	ACTGACCAACAAAACTTCTTTAGCAA	60.072	34.615	0.00	0.00	0.00	3.91
293	294	6.329496	TGACCAACAAAACTTCTTTAGCAAG	58.671	36.000	0.00	0.00	0.00	4.01
294	295	5.660460	ACCAACAAAACTTCTTTAGCAAGG	58.340	37.500	0.00	0.00	0.00	3.61
295	296	5.049828	CCAACAAAACTTCTTTAGCAAGGG	58.950	41.667	0.00	0.00	0.00	3.95
296	297	5.395214	CCAACAAAACTTCTTTAGCAAGGGT	60.395	40.000	0.00	0.00	0.00	4.34
297	298	5.515797	ACAAAACTTCTTTAGCAAGGGTC	57.484	39.130	0.00	0.00	0.00	4.46
298	299	5.201243	ACAAAACTTCTTTAGCAAGGGTCT	58.799	37.500	0.00	0.00	0.00	3.85
299	300	6.362248	ACAAAACTTCTTTAGCAAGGGTCTA	58.638	36.000	0.00	0.00	0.00	2.59
300	301	7.004691	ACAAAACTTCTTTAGCAAGGGTCTAT	58.995	34.615	0.00	0.00	0.00	1.98
301	302	7.040409	ACAAAACTTCTTTAGCAAGGGTCTATG	60.040	37.037	0.00	0.00	0.00	2.23
302	303	6.374417	AACTTCTTTAGCAAGGGTCTATGA	57.626	37.500	0.00	0.00	0.00	2.15
303	304	5.983540	ACTTCTTTAGCAAGGGTCTATGAG	58.016	41.667	0.00	0.00	0.00	2.90
304	305	5.721960	ACTTCTTTAGCAAGGGTCTATGAGA	59.278	40.000	0.00	0.00	0.00	3.27
305	306	6.213600	ACTTCTTTAGCAAGGGTCTATGAGAA	59.786	38.462	0.00	0.00	0.00	2.87
306	307	6.227298	TCTTTAGCAAGGGTCTATGAGAAG	57.773	41.667	0.00	0.00	0.00	2.85
307	308	5.958380	TCTTTAGCAAGGGTCTATGAGAAGA	59.042	40.000	0.00	0.00	0.00	2.87
308	309	6.440647	TCTTTAGCAAGGGTCTATGAGAAGAA	59.559	38.462	0.00	0.00	0.00	2.52
309	310	6.814954	TTAGCAAGGGTCTATGAGAAGAAT	57.185	37.500	0.00	0.00	0.00	2.40
310	311	7.914427	TTAGCAAGGGTCTATGAGAAGAATA	57.086	36.000	0.00	0.00	0.00	1.75
311	312	8.497910	TTAGCAAGGGTCTATGAGAAGAATAT	57.502	34.615	0.00	0.00	0.00	1.28
312	313	6.767456	AGCAAGGGTCTATGAGAAGAATATG	58.233	40.000	0.00	0.00	0.00	1.78
313	314	6.328672	AGCAAGGGTCTATGAGAAGAATATGT	59.671	38.462	0.00	0.00	0.00	2.29
314	315	6.995091	GCAAGGGTCTATGAGAAGAATATGTT	59.005	38.462	0.00	0.00	0.00	2.71
315	316	7.500559	GCAAGGGTCTATGAGAAGAATATGTTT	59.499	37.037	0.00	0.00	0.00	2.83
316	317	9.050601	CAAGGGTCTATGAGAAGAATATGTTTC	57.949	37.037	0.00	0.00	0.00	2.78
317	318	8.324191	AGGGTCTATGAGAAGAATATGTTTCA	57.676	34.615	3.21	0.00	0.00	2.69
318	319	8.943085	AGGGTCTATGAGAAGAATATGTTTCAT	58.057	33.333	3.21	0.00	0.00	2.57
319	320	8.997323	GGGTCTATGAGAAGAATATGTTTCATG	58.003	37.037	0.00	0.00	0.00	3.07
320	321	9.770097	GGTCTATGAGAAGAATATGTTTCATGA	57.230	33.333	0.00	0.00	0.00	3.07
325	326	8.713737	TGAGAAGAATATGTTTCATGAGACTG	57.286	34.615	16.54	0.00	0.00	3.51
326	327	7.767659	TGAGAAGAATATGTTTCATGAGACTGG	59.232	37.037	16.54	0.00	0.00	4.00
327	328	6.541641	AGAAGAATATGTTTCATGAGACTGGC	59.458	38.462	16.54	3.39	0.00	4.85
328	329	5.999044	AGAATATGTTTCATGAGACTGGCT	58.001	37.500	16.54	5.32	0.00	4.75
329	330	6.421485	AGAATATGTTTCATGAGACTGGCTT	58.579	36.000	16.54	6.01	0.00	4.35
330	331	6.888632	AGAATATGTTTCATGAGACTGGCTTT	59.111	34.615	16.54	4.66	0.00	3.51
331	332	7.395489	AGAATATGTTTCATGAGACTGGCTTTT	59.605	33.333	16.54	3.47	0.00	2.27
332	333	4.836125	TGTTTCATGAGACTGGCTTTTC	57.164	40.909	16.54	0.00	0.00	2.29
333	334	4.464008	TGTTTCATGAGACTGGCTTTTCT	58.536	39.130	16.54	0.00	0.00	2.52
334	335	5.620206	TGTTTCATGAGACTGGCTTTTCTA	58.380	37.500	16.54	0.00	0.00	2.10
335	336	5.470098	TGTTTCATGAGACTGGCTTTTCTAC	59.530	40.000	16.54	0.00	0.00	2.59
336	337	5.489792	TTCATGAGACTGGCTTTTCTACT	57.510	39.130	0.00	0.00	0.00	2.57
337	338	5.078411	TCATGAGACTGGCTTTTCTACTC	57.922	43.478	0.00	0.00	0.00	2.59
338	339	3.963428	TGAGACTGGCTTTTCTACTCC	57.037	47.619	0.00	0.00	0.00	3.85
339	340	2.567615	TGAGACTGGCTTTTCTACTCCC	59.432	50.000	0.00	0.00	0.00	4.30
340	341	1.550976	AGACTGGCTTTTCTACTCCCG	59.449	52.381	0.00	0.00	0.00	5.14
341	342	0.613777	ACTGGCTTTTCTACTCCCGG	59.386	55.000	0.00	0.00	0.00	5.73
342	343	0.107654	CTGGCTTTTCTACTCCCGGG	60.108	60.000	16.85	16.85	0.00	5.73
343	344	1.223763	GGCTTTTCTACTCCCGGGG	59.776	63.158	23.50	14.41	0.00	5.73
344	345	1.223763	GCTTTTCTACTCCCGGGGG	59.776	63.158	22.38	22.38	0.00	5.40
345	346	1.559965	GCTTTTCTACTCCCGGGGGT	61.560	60.000	32.94	32.94	36.47	4.95
346	347	0.540454	CTTTTCTACTCCCGGGGGTC	59.460	60.000	34.62	0.00	36.47	4.46
347	348	1.259840	TTTTCTACTCCCGGGGGTCG	61.260	60.000	34.62	26.16	36.47	4.79
369	370	2.751806	GGATACCCTACTATCCCGTTCG	59.248	54.545	0.00	0.00	37.33	3.95
370	371	3.416156	GATACCCTACTATCCCGTTCGT	58.584	50.000	0.00	0.00	0.00	3.85
371	372	2.149973	ACCCTACTATCCCGTTCGTT	57.850	50.000	0.00	0.00	0.00	3.85
372	373	2.027385	ACCCTACTATCCCGTTCGTTC	58.973	52.381	0.00	0.00	0.00	3.95
373	374	1.002033	CCCTACTATCCCGTTCGTTCG	60.002	57.143	0.00	0.00	0.00	3.95
374	375	1.672881	CCTACTATCCCGTTCGTTCGT	59.327	52.381	0.00	0.00	0.00	3.85
375	376	2.098117	CCTACTATCCCGTTCGTTCGTT	59.902	50.000	0.00	0.00	0.00	3.85
376	377	1.986698	ACTATCCCGTTCGTTCGTTG	58.013	50.000	0.00	0.00	0.00	4.10
377	378	1.270550	ACTATCCCGTTCGTTCGTTGT	59.729	47.619	0.00	0.00	0.00	3.32
378	379	2.487762	ACTATCCCGTTCGTTCGTTGTA	59.512	45.455	0.00	0.00	0.00	2.41
379	380	1.701704	ATCCCGTTCGTTCGTTGTAC	58.298	50.000	0.00	0.00	0.00	2.90
380	381	0.667993	TCCCGTTCGTTCGTTGTACT	59.332	50.000	0.00	0.00	0.00	2.73
381	382	1.066908	TCCCGTTCGTTCGTTGTACTT	59.933	47.619	0.00	0.00	0.00	2.24
382	383	1.190763	CCCGTTCGTTCGTTGTACTTG	59.809	52.381	0.00	0.00	0.00	3.16
383	384	1.854126	CCGTTCGTTCGTTGTACTTGT	59.146	47.619	0.00	0.00	0.00	3.16
384	385	2.097733	CCGTTCGTTCGTTGTACTTGTC	60.098	50.000	0.00	0.00	0.00	3.18
385	386	2.785477	CGTTCGTTCGTTGTACTTGTCT	59.215	45.455	0.00	0.00	0.00	3.41
386	387	3.241322	CGTTCGTTCGTTGTACTTGTCTT	59.759	43.478	0.00	0.00	0.00	3.01
387	388	4.502558	GTTCGTTCGTTGTACTTGTCTTG	58.497	43.478	0.00	0.00	0.00	3.02
388	389	2.536803	TCGTTCGTTGTACTTGTCTTGC	59.463	45.455	0.00	0.00	0.00	4.01
389	390	2.348218	CGTTCGTTGTACTTGTCTTGCC	60.348	50.000	0.00	0.00	0.00	4.52
390	391	2.870411	GTTCGTTGTACTTGTCTTGCCT	59.130	45.455	0.00	0.00	0.00	4.75
391	392	2.750948	TCGTTGTACTTGTCTTGCCTC	58.249	47.619	0.00	0.00	0.00	4.70
392	393	1.455786	CGTTGTACTTGTCTTGCCTCG	59.544	52.381	0.00	0.00	0.00	4.63
393	394	1.194772	GTTGTACTTGTCTTGCCTCGC	59.805	52.381	0.00	0.00	0.00	5.03
394	395	0.666274	TGTACTTGTCTTGCCTCGCG	60.666	55.000	0.00	0.00	0.00	5.87
395	396	0.388134	GTACTTGTCTTGCCTCGCGA	60.388	55.000	9.26	9.26	0.00	5.87
396	397	0.530744	TACTTGTCTTGCCTCGCGAT	59.469	50.000	10.36	0.00	0.00	4.58
397	398	0.737715	ACTTGTCTTGCCTCGCGATC	60.738	55.000	10.36	5.29	0.00	3.69
398	399	1.424493	CTTGTCTTGCCTCGCGATCC	61.424	60.000	10.36	3.95	0.00	3.36
399	400	2.956964	GTCTTGCCTCGCGATCCG	60.957	66.667	10.36	0.73	38.61	4.18
400	401	3.449227	TCTTGCCTCGCGATCCGT	61.449	61.111	10.36	0.00	38.35	4.69
401	402	2.116533	TCTTGCCTCGCGATCCGTA	61.117	57.895	10.36	0.00	38.35	4.02
402	403	1.944676	CTTGCCTCGCGATCCGTAC	60.945	63.158	10.36	0.00	38.35	3.67
403	404	3.420214	TTGCCTCGCGATCCGTACC	62.420	63.158	10.36	0.00	38.35	3.34
404	405	4.642542	GCCTCGCGATCCGTACCC	62.643	72.222	10.36	0.00	38.35	3.69
405	406	2.905880	CCTCGCGATCCGTACCCT	60.906	66.667	10.36	0.00	38.35	4.34
406	407	2.331805	CTCGCGATCCGTACCCTG	59.668	66.667	10.36	0.00	38.35	4.45
407	408	3.195591	CTCGCGATCCGTACCCTGG	62.196	68.421	10.36	0.00	38.35	4.45
408	409	3.524606	CGCGATCCGTACCCTGGT	61.525	66.667	0.00	0.00	0.00	4.00
409	410	2.416260	GCGATCCGTACCCTGGTC	59.584	66.667	0.00	0.00	0.00	4.02
410	411	2.125961	GCGATCCGTACCCTGGTCT	61.126	63.158	0.00	0.00	0.00	3.85
411	412	1.734137	CGATCCGTACCCTGGTCTG	59.266	63.158	0.00	0.00	0.00	3.51
412	413	1.442148	GATCCGTACCCTGGTCTGC	59.558	63.158	0.00	0.00	0.00	4.26
413	414	2.029307	GATCCGTACCCTGGTCTGCC	62.029	65.000	0.00	0.00	0.00	4.85
414	415	2.815684	ATCCGTACCCTGGTCTGCCA	62.816	60.000	0.00	0.00	43.73	4.92
415	416	2.367202	CCGTACCCTGGTCTGCCAT	61.367	63.158	0.00	0.00	45.05	4.40
416	417	1.144057	CGTACCCTGGTCTGCCATC	59.856	63.158	0.00	0.00	45.05	3.51
417	418	1.527370	GTACCCTGGTCTGCCATCC	59.473	63.158	0.00	0.00	45.05	3.51
418	419	0.983378	GTACCCTGGTCTGCCATCCT	60.983	60.000	0.00	0.00	45.05	3.24
419	420	0.639943	TACCCTGGTCTGCCATCCTA	59.360	55.000	0.00	0.00	45.05	2.94
420	421	0.029681	ACCCTGGTCTGCCATCCTAT	60.030	55.000	0.00	0.00	45.05	2.57
421	422	1.143813	CCCTGGTCTGCCATCCTATT	58.856	55.000	0.00	0.00	45.05	1.73
422	423	1.496429	CCCTGGTCTGCCATCCTATTT	59.504	52.381	0.00	0.00	45.05	1.40
423	424	2.091665	CCCTGGTCTGCCATCCTATTTT	60.092	50.000	0.00	0.00	45.05	1.82
424	425	2.954318	CCTGGTCTGCCATCCTATTTTG	59.046	50.000	0.00	0.00	45.05	2.44
425	426	3.371917	CCTGGTCTGCCATCCTATTTTGA	60.372	47.826	0.00	0.00	45.05	2.69
426	427	4.467769	CTGGTCTGCCATCCTATTTTGAT	58.532	43.478	0.00	0.00	45.05	2.57
427	428	4.870636	TGGTCTGCCATCCTATTTTGATT	58.129	39.130	0.00	0.00	40.46	2.57
428	429	5.271598	TGGTCTGCCATCCTATTTTGATTT	58.728	37.500	0.00	0.00	40.46	2.17
429	430	5.127519	TGGTCTGCCATCCTATTTTGATTTG	59.872	40.000	0.00	0.00	40.46	2.32
430	431	5.045872	GTCTGCCATCCTATTTTGATTTGC	58.954	41.667	0.00	0.00	0.00	3.68
431	432	4.710865	TCTGCCATCCTATTTTGATTTGCA	59.289	37.500	0.00	0.00	0.00	4.08
432	433	5.013568	TGCCATCCTATTTTGATTTGCAG	57.986	39.130	0.00	0.00	0.00	4.41
433	434	4.141892	TGCCATCCTATTTTGATTTGCAGG	60.142	41.667	0.00	0.00	0.00	4.85
434	435	4.374399	CCATCCTATTTTGATTTGCAGGC	58.626	43.478	0.00	0.00	0.00	4.85
435	436	4.374399	CATCCTATTTTGATTTGCAGGCC	58.626	43.478	0.00	0.00	0.00	5.19
436	437	3.711863	TCCTATTTTGATTTGCAGGCCT	58.288	40.909	0.00	0.00	0.00	5.19
437	438	4.865905	TCCTATTTTGATTTGCAGGCCTA	58.134	39.130	3.98	0.00	0.00	3.93
438	439	4.889409	TCCTATTTTGATTTGCAGGCCTAG	59.111	41.667	3.98	0.47	0.00	3.02
439	440	4.038402	CCTATTTTGATTTGCAGGCCTAGG	59.962	45.833	3.98	3.67	0.00	3.02
440	441	2.603075	TTTGATTTGCAGGCCTAGGT	57.397	45.000	3.98	0.00	0.00	3.08
441	442	1.838112	TTGATTTGCAGGCCTAGGTG	58.162	50.000	3.98	2.48	0.00	4.00
442	443	0.698238	TGATTTGCAGGCCTAGGTGT	59.302	50.000	3.98	0.00	0.00	4.16
443	444	1.912731	TGATTTGCAGGCCTAGGTGTA	59.087	47.619	3.98	0.00	0.00	2.90
444	445	2.289565	GATTTGCAGGCCTAGGTGTAC	58.710	52.381	3.98	0.00	0.00	2.90
445	446	1.060729	TTTGCAGGCCTAGGTGTACA	58.939	50.000	3.98	1.51	0.00	2.90
446	447	0.613260	TTGCAGGCCTAGGTGTACAG	59.387	55.000	3.98	0.00	0.00	2.74
447	448	0.544357	TGCAGGCCTAGGTGTACAGT	60.544	55.000	3.98	0.00	0.00	3.55
448	449	1.272816	TGCAGGCCTAGGTGTACAGTA	60.273	52.381	3.98	0.00	0.00	2.74
449	450	1.829222	GCAGGCCTAGGTGTACAGTAA	59.171	52.381	3.98	0.00	0.00	2.24
450	451	2.434702	GCAGGCCTAGGTGTACAGTAAT	59.565	50.000	3.98	0.00	0.00	1.89
451	452	3.640029	GCAGGCCTAGGTGTACAGTAATA	59.360	47.826	3.98	0.00	0.00	0.98
452	453	4.262079	GCAGGCCTAGGTGTACAGTAATAG	60.262	50.000	3.98	0.00	0.00	1.73
453	454	4.281182	CAGGCCTAGGTGTACAGTAATAGG	59.719	50.000	3.98	14.18	34.23	2.57
454	455	4.169461	AGGCCTAGGTGTACAGTAATAGGA	59.831	45.833	19.47	0.00	33.12	2.94
455	456	4.523558	GGCCTAGGTGTACAGTAATAGGAG	59.476	50.000	19.47	2.28	33.12	3.69
456	457	4.022155	GCCTAGGTGTACAGTAATAGGAGC	60.022	50.000	19.47	7.46	33.12	4.70
457	458	5.138276	CCTAGGTGTACAGTAATAGGAGCA	58.862	45.833	13.61	0.00	33.12	4.26
458	459	5.775701	CCTAGGTGTACAGTAATAGGAGCAT	59.224	44.000	13.61	0.00	33.12	3.79
459	460	5.793030	AGGTGTACAGTAATAGGAGCATC	57.207	43.478	0.00	0.00	0.00	3.91
460	461	5.459505	AGGTGTACAGTAATAGGAGCATCT	58.540	41.667	0.00	0.00	33.73	2.90
461	462	5.536916	AGGTGTACAGTAATAGGAGCATCTC	59.463	44.000	0.00	0.00	33.73	2.75
462	463	5.536916	GGTGTACAGTAATAGGAGCATCTCT	59.463	44.000	0.00	0.00	33.73	3.10
463	464	6.442952	GTGTACAGTAATAGGAGCATCTCTG	58.557	44.000	0.00	0.00	33.73	3.35
464	465	6.263392	GTGTACAGTAATAGGAGCATCTCTGA	59.737	42.308	0.00	0.00	33.73	3.27
465	466	7.007116	TGTACAGTAATAGGAGCATCTCTGAT	58.993	38.462	0.00	0.00	33.73	2.90
466	467	8.164070	TGTACAGTAATAGGAGCATCTCTGATA	58.836	37.037	0.00	0.00	33.73	2.15
467	468	9.184523	GTACAGTAATAGGAGCATCTCTGATAT	57.815	37.037	0.00	0.00	33.73	1.63
468	469	8.065473	ACAGTAATAGGAGCATCTCTGATATG	57.935	38.462	0.00	0.00	33.73	1.78
469	470	7.892771	ACAGTAATAGGAGCATCTCTGATATGA	59.107	37.037	7.17	0.00	33.73	2.15
470	471	8.190122	CAGTAATAGGAGCATCTCTGATATGAC	58.810	40.741	7.17	1.06	33.73	3.06
471	472	5.833406	ATAGGAGCATCTCTGATATGACG	57.167	43.478	7.17	0.00	33.73	4.35
472	473	3.495331	AGGAGCATCTCTGATATGACGT	58.505	45.455	7.17	0.00	33.73	4.34
473	474	3.505680	AGGAGCATCTCTGATATGACGTC	59.494	47.826	9.11	9.11	33.73	4.34
474	475	3.487536	GAGCATCTCTGATATGACGTCG	58.512	50.000	11.62	0.00	0.00	5.12
475	476	2.881513	AGCATCTCTGATATGACGTCGT	59.118	45.455	15.78	15.78	0.00	4.34
476	477	4.065789	AGCATCTCTGATATGACGTCGTA	58.934	43.478	19.29	19.29	0.00	3.43
477	478	4.083749	AGCATCTCTGATATGACGTCGTAC	60.084	45.833	19.39	13.38	0.00	3.67
478	479	4.319549	GCATCTCTGATATGACGTCGTACA	60.320	45.833	19.39	16.65	0.00	2.90
479	480	5.617973	GCATCTCTGATATGACGTCGTACAT	60.618	44.000	19.39	6.19	0.00	2.29
480	481	6.402226	GCATCTCTGATATGACGTCGTACATA	60.402	42.308	19.39	8.29	34.27	2.29
481	482	6.463483	TCTCTGATATGACGTCGTACATAC	57.537	41.667	19.39	11.56	32.90	2.39
482	483	5.987347	TCTCTGATATGACGTCGTACATACA	59.013	40.000	19.39	14.85	32.90	2.29
483	484	5.982324	TCTGATATGACGTCGTACATACAC	58.018	41.667	19.39	7.93	32.90	2.90
484	485	5.524646	TCTGATATGACGTCGTACATACACA	59.475	40.000	19.39	11.36	32.90	3.72
485	486	5.504392	TGATATGACGTCGTACATACACAC	58.496	41.667	19.39	5.28	32.90	3.82
486	487	5.295045	TGATATGACGTCGTACATACACACT	59.705	40.000	19.39	0.61	32.90	3.55
487	488	3.191735	TGACGTCGTACATACACACTG	57.808	47.619	11.62	0.00	0.00	3.66
488	489	2.807392	TGACGTCGTACATACACACTGA	59.193	45.455	11.62	0.00	0.00	3.41
489	490	3.120442	TGACGTCGTACATACACACTGAG	60.120	47.826	11.62	0.00	0.00	3.35
490	491	2.174764	CGTCGTACATACACACTGAGC	58.825	52.381	0.00	0.00	0.00	4.26
491	492	2.527100	GTCGTACATACACACTGAGCC	58.473	52.381	0.00	0.00	0.00	4.70
492	493	2.094906	GTCGTACATACACACTGAGCCA	60.095	50.000	0.00	0.00	0.00	4.75
493	494	2.758423	TCGTACATACACACTGAGCCAT	59.242	45.455	0.00	0.00	0.00	4.40
494	495	3.116300	CGTACATACACACTGAGCCATC	58.884	50.000	0.00	0.00	0.00	3.51
495	496	3.181486	CGTACATACACACTGAGCCATCT	60.181	47.826	0.00	0.00	0.00	2.90
496	497	3.257469	ACATACACACTGAGCCATCTG	57.743	47.619	0.00	0.00	0.00	2.90
497	498	1.938577	CATACACACTGAGCCATCTGC	59.061	52.381	0.00	0.00	41.71	4.26
498	499	0.975887	TACACACTGAGCCATCTGCA	59.024	50.000	0.00	0.00	44.83	4.41
499	500	0.604780	ACACACTGAGCCATCTGCAC	60.605	55.000	0.00	0.00	44.83	4.57
500	501	1.002868	ACACTGAGCCATCTGCACC	60.003	57.895	0.00	0.00	44.83	5.01
501	502	1.298993	CACTGAGCCATCTGCACCT	59.701	57.895	0.00	0.00	44.83	4.00
502	503	1.025113	CACTGAGCCATCTGCACCTG	61.025	60.000	0.00	0.00	44.83	4.00
503	504	1.298993	CTGAGCCATCTGCACCTGT	59.701	57.895	0.00	0.00	44.83	4.00
504	505	1.002990	TGAGCCATCTGCACCTGTG	60.003	57.895	0.00	0.00	44.83	3.66
505	506	1.002868	GAGCCATCTGCACCTGTGT	60.003	57.895	0.00	0.00	44.83	3.72
506	507	1.303074	AGCCATCTGCACCTGTGTG	60.303	57.895	0.00	0.00	44.83	3.82
514	515	4.201951	CACCTGTGTGCGGGATAC	57.798	61.111	0.00	0.00	43.97	2.24
515	516	1.295101	CACCTGTGTGCGGGATACA	59.705	57.895	0.00	0.00	43.97	2.29
516	517	0.107703	CACCTGTGTGCGGGATACAT	60.108	55.000	0.00	0.00	43.97	2.29
517	518	1.138069	CACCTGTGTGCGGGATACATA	59.862	52.381	0.00	0.00	43.97	2.29
518	519	2.047061	ACCTGTGTGCGGGATACATAT	58.953	47.619	0.00	0.00	43.97	1.78
519	520	2.438021	ACCTGTGTGCGGGATACATATT	59.562	45.455	0.00	0.00	43.97	1.28
520	521	2.807967	CCTGTGTGCGGGATACATATTG	59.192	50.000	0.00	0.00	43.97	1.90
521	522	3.466836	CTGTGTGCGGGATACATATTGT	58.533	45.455	0.00	0.00	39.74	2.71
522	523	3.876914	CTGTGTGCGGGATACATATTGTT	59.123	43.478	0.00	0.00	39.74	2.83
523	524	4.265893	TGTGTGCGGGATACATATTGTTT	58.734	39.130	0.00	0.00	39.74	2.83
524	525	5.429130	TGTGTGCGGGATACATATTGTTTA	58.571	37.500	0.00	0.00	39.74	2.01
525	526	5.525745	TGTGTGCGGGATACATATTGTTTAG	59.474	40.000	0.00	0.00	39.74	1.85
526	527	4.513692	TGTGCGGGATACATATTGTTTAGC	59.486	41.667	0.00	0.00	39.74	3.09
527	528	4.513692	GTGCGGGATACATATTGTTTAGCA	59.486	41.667	0.00	0.00	39.74	3.49
528	529	5.181245	GTGCGGGATACATATTGTTTAGCAT	59.819	40.000	0.00	0.00	39.74	3.79
529	530	6.370442	GTGCGGGATACATATTGTTTAGCATA	59.630	38.462	0.00	0.00	39.74	3.14
530	531	6.937465	TGCGGGATACATATTGTTTAGCATAA	59.063	34.615	0.00	0.00	39.74	1.90
531	532	7.445707	TGCGGGATACATATTGTTTAGCATAAA	59.554	33.333	0.00	0.00	39.74	1.40
532	533	8.293867	GCGGGATACATATTGTTTAGCATAAAA	58.706	33.333	0.00	0.00	39.74	1.52
548	549	7.823149	AGCATAAAATTTTCTCTTCACATGC	57.177	32.000	17.36	17.36	36.25	4.06
549	550	7.380536	AGCATAAAATTTTCTCTTCACATGCA	58.619	30.769	23.02	0.00	37.97	3.96
550	551	7.874016	AGCATAAAATTTTCTCTTCACATGCAA	59.126	29.630	23.02	0.00	37.97	4.08
551	552	8.497554	GCATAAAATTTTCTCTTCACATGCAAA	58.502	29.630	19.04	0.00	36.09	3.68
555	556	8.496707	AAATTTTCTCTTCACATGCAAAAAGT	57.503	26.923	0.00	0.00	0.00	2.66
556	557	6.890663	TTTTCTCTTCACATGCAAAAAGTG	57.109	33.333	0.00	0.00	34.67	3.16
557	558	5.581126	TTCTCTTCACATGCAAAAAGTGT	57.419	34.783	0.00	0.00	34.94	3.55
558	559	5.581126	TCTCTTCACATGCAAAAAGTGTT	57.419	34.783	0.00	0.00	34.94	3.32
559	560	5.581605	TCTCTTCACATGCAAAAAGTGTTC	58.418	37.500	0.00	0.00	34.94	3.18
560	561	5.357878	TCTCTTCACATGCAAAAAGTGTTCT	59.642	36.000	0.00	0.00	34.94	3.01
561	562	5.342433	TCTTCACATGCAAAAAGTGTTCTG	58.658	37.500	0.00	0.00	34.94	3.02
562	563	4.717233	TCACATGCAAAAAGTGTTCTGT	57.283	36.364	0.00	0.00	34.94	3.41
563	564	4.671377	TCACATGCAAAAAGTGTTCTGTC	58.329	39.130	0.00	0.00	34.94	3.51
564	565	3.483196	CACATGCAAAAAGTGTTCTGTCG	59.517	43.478	0.00	0.00	0.00	4.35
565	566	3.128589	ACATGCAAAAAGTGTTCTGTCGT	59.871	39.130	0.00	0.00	0.00	4.34
566	567	3.840890	TGCAAAAAGTGTTCTGTCGTT	57.159	38.095	0.00	0.00	0.00	3.85
567	568	3.753842	TGCAAAAAGTGTTCTGTCGTTC	58.246	40.909	0.00	0.00	0.00	3.95
568	569	3.438781	TGCAAAAAGTGTTCTGTCGTTCT	59.561	39.130	0.00	0.00	0.00	3.01
569	570	3.786048	GCAAAAAGTGTTCTGTCGTTCTG	59.214	43.478	0.00	0.00	0.00	3.02
570	571	3.675467	AAAAGTGTTCTGTCGTTCTGC	57.325	42.857	0.00	0.00	0.00	4.26
571	572	2.604046	AAGTGTTCTGTCGTTCTGCT	57.396	45.000	0.00	0.00	0.00	4.24
572	573	3.728076	AAGTGTTCTGTCGTTCTGCTA	57.272	42.857	0.00	0.00	0.00	3.49
573	574	3.290308	AGTGTTCTGTCGTTCTGCTAG	57.710	47.619	0.00	0.00	0.00	3.42
574	575	1.721926	GTGTTCTGTCGTTCTGCTAGC	59.278	52.381	8.10	8.10	0.00	3.42
575	576	1.336887	TGTTCTGTCGTTCTGCTAGCC	60.337	52.381	13.29	0.00	0.00	3.93
576	577	1.067495	GTTCTGTCGTTCTGCTAGCCT	60.067	52.381	13.29	0.00	0.00	4.58
577	578	0.528017	TCTGTCGTTCTGCTAGCCTG	59.472	55.000	13.29	5.32	0.00	4.85
578	579	0.459237	CTGTCGTTCTGCTAGCCTGG	60.459	60.000	13.29	2.59	0.00	4.45
579	580	1.185618	TGTCGTTCTGCTAGCCTGGT	61.186	55.000	13.29	0.00	0.00	4.00
580	581	0.458716	GTCGTTCTGCTAGCCTGGTC	60.459	60.000	13.29	0.00	0.00	4.02
581	582	1.517257	CGTTCTGCTAGCCTGGTCG	60.517	63.158	13.29	7.11	0.00	4.79
582	583	1.890894	GTTCTGCTAGCCTGGTCGA	59.109	57.895	13.29	0.00	0.00	4.20
583	584	0.458716	GTTCTGCTAGCCTGGTCGAC	60.459	60.000	13.29	7.13	0.00	4.20
584	585	1.605058	TTCTGCTAGCCTGGTCGACC	61.605	60.000	28.17	28.17	0.00	4.79
585	586	2.283604	TGCTAGCCTGGTCGACCA	60.284	61.111	34.13	34.13	45.30	4.02
586	587	2.184579	GCTAGCCTGGTCGACCAC	59.815	66.667	33.23	23.72	42.01	4.16
587	588	2.352032	GCTAGCCTGGTCGACCACT	61.352	63.158	33.23	28.88	42.01	4.00
588	589	1.513158	CTAGCCTGGTCGACCACTG	59.487	63.158	33.23	25.77	42.01	3.66
589	590	1.228769	TAGCCTGGTCGACCACTGT	60.229	57.895	33.23	20.88	42.01	3.55
590	591	0.830444	TAGCCTGGTCGACCACTGTT	60.830	55.000	33.23	24.60	42.01	3.16
591	592	1.961277	GCCTGGTCGACCACTGTTG	60.961	63.158	33.23	21.97	42.01	3.33
592	593	1.745890	CCTGGTCGACCACTGTTGA	59.254	57.895	33.23	10.87	42.01	3.18
595	596	4.724022	GTCGACCACTGTTGACGT	57.276	55.556	3.51	0.00	44.00	4.34
596	597	2.967740	GTCGACCACTGTTGACGTT	58.032	52.632	3.51	0.00	44.00	3.99
597	598	1.283736	GTCGACCACTGTTGACGTTT	58.716	50.000	3.51	0.00	44.00	3.60
598	599	1.005347	GTCGACCACTGTTGACGTTTG	60.005	52.381	3.51	0.00	44.00	2.93
599	600	0.303493	CGACCACTGTTGACGTTTGG	59.697	55.000	0.00	0.00	0.00	3.28
600	601	0.661020	GACCACTGTTGACGTTTGGG	59.339	55.000	0.00	0.00	0.00	4.12
601	602	0.253610	ACCACTGTTGACGTTTGGGA	59.746	50.000	0.00	0.00	0.00	4.37
602	603	1.133915	ACCACTGTTGACGTTTGGGAT	60.134	47.619	0.00	0.00	0.00	3.85
603	604	1.953686	CCACTGTTGACGTTTGGGATT	59.046	47.619	0.00	0.00	0.00	3.01
604	605	2.031157	CCACTGTTGACGTTTGGGATTC	60.031	50.000	0.00	0.00	0.00	2.52
605	606	2.616376	CACTGTTGACGTTTGGGATTCA	59.384	45.455	0.00	0.00	0.00	2.57
606	607	3.066064	CACTGTTGACGTTTGGGATTCAA	59.934	43.478	0.00	0.00	0.00	2.69
607	608	3.697045	ACTGTTGACGTTTGGGATTCAAA	59.303	39.130	0.00	0.00	42.50	2.69
615	616	0.958091	TTGGGATTCAAACCTGTGCG	59.042	50.000	0.00	0.00	31.46	5.34
616	617	0.893270	TGGGATTCAAACCTGTGCGG	60.893	55.000	0.00	0.00	39.35	5.69
617	618	0.608035	GGGATTCAAACCTGTGCGGA	60.608	55.000	0.00	0.00	36.31	5.54
618	619	0.804989	GGATTCAAACCTGTGCGGAG	59.195	55.000	0.00	0.00	36.31	4.63
635	636	4.722203	CGGAGCATAAATCTACTGCAAG	57.278	45.455	0.00	0.00	38.37	4.01
655	656	9.155975	CTGCAAGTAACTATTTGTCATAAGTCT	57.844	33.333	0.00	0.00	0.00	3.24
659	660	8.853469	AGTAACTATTTGTCATAAGTCTACGC	57.147	34.615	0.00	0.00	0.00	4.42
660	661	7.919621	AGTAACTATTTGTCATAAGTCTACGCC	59.080	37.037	0.00	0.00	0.00	5.68
661	662	5.279384	ACTATTTGTCATAAGTCTACGCCG	58.721	41.667	0.00	0.00	0.00	6.46
662	663	3.581024	TTTGTCATAAGTCTACGCCGT	57.419	42.857	0.00	0.00	0.00	5.68
663	664	2.554806	TGTCATAAGTCTACGCCGTG	57.445	50.000	0.00	0.00	0.00	4.94
664	665	1.814394	TGTCATAAGTCTACGCCGTGT	59.186	47.619	0.00	0.00	0.00	4.49
665	666	2.182825	GTCATAAGTCTACGCCGTGTG	58.817	52.381	0.00	0.00	0.00	3.82
666	667	2.086094	TCATAAGTCTACGCCGTGTGA	58.914	47.619	0.00	0.00	0.00	3.58
667	668	2.488937	TCATAAGTCTACGCCGTGTGAA	59.511	45.455	0.00	0.00	0.00	3.18
668	669	2.624316	TAAGTCTACGCCGTGTGAAG	57.376	50.000	0.00	0.00	0.00	3.02
669	670	0.666577	AAGTCTACGCCGTGTGAAGC	60.667	55.000	0.00	0.00	0.00	3.86
670	671	1.372499	GTCTACGCCGTGTGAAGCA	60.372	57.895	0.00	0.00	0.00	3.91
671	672	0.736325	GTCTACGCCGTGTGAAGCAT	60.736	55.000	0.00	0.00	0.00	3.79
672	673	0.457853	TCTACGCCGTGTGAAGCATC	60.458	55.000	0.00	0.00	0.00	3.91
673	674	0.458543	CTACGCCGTGTGAAGCATCT	60.459	55.000	0.00	0.00	0.00	2.90
674	675	0.037697	TACGCCGTGTGAAGCATCTT	60.038	50.000	0.00	0.00	0.00	2.40
675	676	1.133253	CGCCGTGTGAAGCATCTTG	59.867	57.895	0.00	0.00	0.00	3.02
676	677	1.154150	GCCGTGTGAAGCATCTTGC	60.154	57.895	0.00	0.00	45.46	4.01
705	706	9.698617	GTAGCATTTTTGACTTATTAGTTACGG	57.301	33.333	0.00	0.00	33.84	4.02
706	707	8.331730	AGCATTTTTGACTTATTAGTTACGGT	57.668	30.769	0.00	0.00	33.84	4.83
707	708	8.448615	AGCATTTTTGACTTATTAGTTACGGTC	58.551	33.333	0.00	0.00	33.84	4.79
708	709	8.231837	GCATTTTTGACTTATTAGTTACGGTCA	58.768	33.333	0.00	0.00	33.84	4.02
711	712	8.891671	TTTTGACTTATTAGTTACGGTCAACT	57.108	30.769	0.00	4.97	41.34	3.16
712	713	9.979578	TTTTGACTTATTAGTTACGGTCAACTA	57.020	29.630	0.00	3.31	41.34	2.24
713	714	8.970691	TTGACTTATTAGTTACGGTCAACTAC	57.029	34.615	0.00	0.00	39.98	2.73
714	715	8.109705	TGACTTATTAGTTACGGTCAACTACA	57.890	34.615	6.16	0.00	39.98	2.74
715	716	8.239314	TGACTTATTAGTTACGGTCAACTACAG	58.761	37.037	6.16	6.01	39.98	2.74
716	717	7.542025	ACTTATTAGTTACGGTCAACTACAGG	58.458	38.462	6.16	2.58	39.98	4.00
717	718	5.990120	ATTAGTTACGGTCAACTACAGGT	57.010	39.130	6.16	0.00	39.98	4.00
718	719	8.574251	TTATTAGTTACGGTCAACTACAGGTA	57.426	34.615	6.16	0.00	39.98	3.08
719	720	6.892658	TTAGTTACGGTCAACTACAGGTAA	57.107	37.500	6.16	0.00	39.98	2.85
720	721	5.126396	AGTTACGGTCAACTACAGGTAAC	57.874	43.478	10.79	10.79	43.17	2.50
721	722	4.584325	AGTTACGGTCAACTACAGGTAACA	59.416	41.667	16.66	0.00	44.14	2.41
722	723	3.375782	ACGGTCAACTACAGGTAACAC	57.624	47.619	0.00	0.00	41.41	3.32
723	724	2.694628	ACGGTCAACTACAGGTAACACA	59.305	45.455	0.00	0.00	41.41	3.72
724	725	3.243636	ACGGTCAACTACAGGTAACACAG	60.244	47.826	0.00	0.00	41.41	3.66
725	726	3.243636	CGGTCAACTACAGGTAACACAGT	60.244	47.826	0.00	0.00	41.41	3.55
726	727	4.022935	CGGTCAACTACAGGTAACACAGTA	60.023	45.833	0.00	0.00	41.41	2.74
727	728	5.507817	CGGTCAACTACAGGTAACACAGTAA	60.508	44.000	0.00	0.00	41.41	2.24
728	729	5.693555	GGTCAACTACAGGTAACACAGTAAC	59.306	44.000	0.00	0.00	41.41	2.50
729	730	6.462067	GGTCAACTACAGGTAACACAGTAACT	60.462	42.308	0.00	0.00	41.41	2.24
730	731	7.255590	GGTCAACTACAGGTAACACAGTAACTA	60.256	40.741	0.00	0.00	41.41	2.24
731	732	7.806960	GTCAACTACAGGTAACACAGTAACTAG	59.193	40.741	0.00	0.00	41.41	2.57
732	733	7.503566	TCAACTACAGGTAACACAGTAACTAGT	59.496	37.037	0.00	0.00	41.41	2.57
733	734	7.446001	ACTACAGGTAACACAGTAACTAGTC	57.554	40.000	0.00	0.00	41.41	2.59
734	735	7.230027	ACTACAGGTAACACAGTAACTAGTCT	58.770	38.462	0.00	0.00	41.41	3.24
735	736	8.378565	ACTACAGGTAACACAGTAACTAGTCTA	58.621	37.037	0.00	0.00	41.41	2.59
736	737	7.684937	ACAGGTAACACAGTAACTAGTCTAG	57.315	40.000	5.27	5.27	41.41	2.43
737	738	6.658391	ACAGGTAACACAGTAACTAGTCTAGG	59.342	42.308	11.61	0.00	41.41	3.02
738	739	6.095160	CAGGTAACACAGTAACTAGTCTAGGG	59.905	46.154	11.61	0.00	41.41	3.53
739	740	6.012157	AGGTAACACAGTAACTAGTCTAGGGA	60.012	42.308	11.61	0.00	41.41	4.20
740	741	6.660949	GGTAACACAGTAACTAGTCTAGGGAA	59.339	42.308	11.61	0.00	0.00	3.97
741	742	6.837471	AACACAGTAACTAGTCTAGGGAAG	57.163	41.667	11.61	0.46	0.00	3.46
787	790	1.677637	GGCTCTCGTCCGGGATTTCT	61.678	60.000	0.00	0.00	0.00	2.52
798	801	0.469917	GGGATTTCTGGAGGCGATCA	59.530	55.000	0.00	0.00	0.00	2.92
799	802	1.542108	GGGATTTCTGGAGGCGATCAG	60.542	57.143	0.00	0.00	0.00	2.90
801	804	0.471617	ATTTCTGGAGGCGATCAGGG	59.528	55.000	0.00	0.00	0.00	4.45
826	829	3.403057	CACGTCCGTGTCTTGCCG	61.403	66.667	11.49	0.00	40.91	5.69
849	852	2.299521	CTAGGGTTCTTCGAGATCCGT	58.700	52.381	10.14	10.14	35.42	4.69
852	855	0.450983	GGTTCTTCGAGATCCGTCGT	59.549	55.000	4.51	0.00	40.93	4.34
853	856	1.536149	GTTCTTCGAGATCCGTCGTG	58.464	55.000	4.51	0.67	40.93	4.35
865	869	1.749638	CGTCGTGCTAGGTCTCCCT	60.750	63.158	0.00	0.00	45.51	4.20
874	878	0.252103	TAGGTCTCCCTGGCGTTCTT	60.252	55.000	0.00	0.00	42.67	2.52
902	913	0.394216	TGTGAGCCCATCCAAATCCG	60.394	55.000	0.00	0.00	0.00	4.18
919	930	0.460311	CCGAGTCCTGTCCACCATAC	59.540	60.000	0.00	0.00	0.00	2.39
920	931	1.475403	CGAGTCCTGTCCACCATACT	58.525	55.000	0.00	0.00	0.00	2.12
932	943	0.683504	ACCATACTCCTTCTCCGCGT	60.684	55.000	4.92	0.00	0.00	6.01
978	990	2.711547	ACACTTTTCCTAGGAGGTGCTT	59.288	45.455	26.98	14.99	36.53	3.91
1020	1042	2.760385	GCGGTGGAGGGAGTAGCT	60.760	66.667	0.00	0.00	0.00	3.32
1215	1237	2.691409	TTAAAGGGATCGACTGCAGG	57.309	50.000	19.93	0.36	0.00	4.85
1268	1290	1.841556	ACCAAGAGTCGGGGAAGCA	60.842	57.895	9.74	0.00	0.00	3.91
1301	1323	1.410153	GGATGGACCATGGATGTTTGC	59.590	52.381	21.47	0.44	38.79	3.68
1337	1359	2.042297	TGGTTGAGGATTATGTGCCCAA	59.958	45.455	0.00	0.00	0.00	4.12
1429	1451	2.493035	TGATGAACGAAGAAGCTGCAA	58.507	42.857	1.02	0.00	0.00	4.08
1474	1496	3.568430	CGTGTATGTGGAGGCAGATACTA	59.432	47.826	0.00	0.00	33.89	1.82
1605	1627	2.042944	GGGGACAATGGGAAGGCC	60.043	66.667	0.00	0.00	0.00	5.19
1733	1755	9.520515	AGACAAAGATTGTACCATCAAACTTAT	57.479	29.630	9.43	0.00	45.52	1.73
1743	1765	5.749462	ACCATCAAACTTATGAAGGGAGAG	58.251	41.667	3.92	0.00	41.39	3.20
1746	1768	5.241403	TCAAACTTATGAAGGGAGAGCAA	57.759	39.130	0.00	0.00	0.00	3.91
1764	1786	1.818060	CAAGCCCAATTTGGTCGATGA	59.182	47.619	14.26	0.00	35.17	2.92
1820	3413	0.485099	GAGGAGAGGCTATGGAGGGA	59.515	60.000	0.00	0.00	0.00	4.20
1857	3450	1.871077	CGGAACCCGTAACTTTGGC	59.129	57.895	0.00	0.00	42.73	4.52
2051	3645	2.464157	AACTAGTGCTTGACCAGAGC	57.536	50.000	0.00	0.00	40.53	4.09
2200	3795	1.680338	GCAGTGACAAACTTCCAGGT	58.320	50.000	0.00	0.00	36.83	4.00
2254	3849	1.757340	GGAGAGGGTCGTAGGTGGG	60.757	68.421	0.00	0.00	0.00	4.61
2264	3859	1.615424	GTAGGTGGGGAAGGCCAGA	60.615	63.158	5.01	0.00	35.15	3.86
2410	4005	4.190772	TCGCTGCTAATGAAATCACATCA	58.809	39.130	0.00	0.00	0.00	3.07
2415	4010	3.561310	GCTAATGAAATCACATCAGCCGA	59.439	43.478	0.00	0.00	36.01	5.54
2475	4070	2.852075	TGGAACAGTCGGGGGCTT	60.852	61.111	0.00	0.00	0.00	4.35
2526	4121	4.431524	TTGGGGAGGGCGGAGGAT	62.432	66.667	0.00	0.00	0.00	3.24
2550	4145	1.265905	GACGTTCTGTTTTTGGCGGAT	59.734	47.619	0.00	0.00	0.00	4.18
2611	4206	4.953579	GGTCATTGGGTATGGTTAACATGT	59.046	41.667	8.10	0.00	40.82	3.21
2679	4274	0.681243	GGAGAGGGTTGGATGTTGCC	60.681	60.000	0.00	0.00	0.00	4.52
2695	4290	6.205658	GGATGTTGCCTTAAGATCTTATGGTC	59.794	42.308	32.33	26.73	40.49	4.02
2706	4301	1.138859	TCTTATGGTCGGAGGCATGTG	59.861	52.381	0.00	0.00	0.00	3.21
2746	4341	1.686110	GATGGTCGGGTCTGGAGGT	60.686	63.158	0.00	0.00	0.00	3.85

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
1	2	4.379339	TCCACGAAAACAAAGGGAAAAG	57.621	40.909	0.00	0.00	0.00	2.27
2	3	5.828859	TCTATCCACGAAAACAAAGGGAAAA	59.171	36.000	0.00	0.00	0.00	2.29
4	5	4.975631	TCTATCCACGAAAACAAAGGGAA	58.024	39.130	0.00	0.00	0.00	3.97
5	6	4.627284	TCTATCCACGAAAACAAAGGGA	57.373	40.909	0.00	0.00	0.00	4.20
6	7	6.598064	ACTTATCTATCCACGAAAACAAAGGG	59.402	38.462	0.00	0.00	0.00	3.95
7	8	7.611213	ACTTATCTATCCACGAAAACAAAGG	57.389	36.000	0.00	0.00	0.00	3.11
9	10	9.661563	ACATACTTATCTATCCACGAAAACAAA	57.338	29.630	0.00	0.00	0.00	2.83
14	15	9.961265	CACTTACATACTTATCTATCCACGAAA	57.039	33.333	0.00	0.00	0.00	3.46
15	16	9.128404	ACACTTACATACTTATCTATCCACGAA	57.872	33.333	0.00	0.00	0.00	3.85
16	17	8.687292	ACACTTACATACTTATCTATCCACGA	57.313	34.615	0.00	0.00	0.00	4.35
17	18	9.181805	CAACACTTACATACTTATCTATCCACG	57.818	37.037	0.00	0.00	0.00	4.94
33	34	9.984190	AGGAAAAAGTTAAAAACAACACTTACA	57.016	25.926	0.00	0.00	0.00	2.41
36	37	8.779303	CCAAGGAAAAAGTTAAAAACAACACTT	58.221	29.630	0.00	0.00	0.00	3.16
37	38	7.934665	ACCAAGGAAAAAGTTAAAAACAACACT	59.065	29.630	0.00	0.00	0.00	3.55
38	39	8.090250	ACCAAGGAAAAAGTTAAAAACAACAC	57.910	30.769	0.00	0.00	0.00	3.32
39	40	8.678593	AACCAAGGAAAAAGTTAAAAACAACA	57.321	26.923	0.00	0.00	0.00	3.33
40	41	9.601971	GAAACCAAGGAAAAAGTTAAAAACAAC	57.398	29.630	0.00	0.00	0.00	3.32
41	42	9.562408	AGAAACCAAGGAAAAAGTTAAAAACAA	57.438	25.926	0.00	0.00	0.00	2.83
42	43	9.210329	GAGAAACCAAGGAAAAAGTTAAAAACA	57.790	29.630	0.00	0.00	0.00	2.83
43	44	9.431887	AGAGAAACCAAGGAAAAAGTTAAAAAC	57.568	29.630	0.00	0.00	0.00	2.43
45	46	9.430623	CAAGAGAAACCAAGGAAAAAGTTAAAA	57.569	29.630	0.00	0.00	0.00	1.52
46	47	8.590204	ACAAGAGAAACCAAGGAAAAAGTTAAA	58.410	29.630	0.00	0.00	0.00	1.52
47	48	8.129496	ACAAGAGAAACCAAGGAAAAAGTTAA	57.871	30.769	0.00	0.00	0.00	2.01
48	49	7.712204	ACAAGAGAAACCAAGGAAAAAGTTA	57.288	32.000	0.00	0.00	0.00	2.24
49	50	6.605471	ACAAGAGAAACCAAGGAAAAAGTT	57.395	33.333	0.00	0.00	0.00	2.66
50	51	7.712204	TTACAAGAGAAACCAAGGAAAAAGT	57.288	32.000	0.00	0.00	0.00	2.66
76	77	8.619546	CCATGAAAACAAAAGGAAGCAAAAATA	58.380	29.630	0.00	0.00	0.00	1.40
77	78	7.338957	TCCATGAAAACAAAAGGAAGCAAAAAT	59.661	29.630	0.00	0.00	0.00	1.82
78	79	6.656693	TCCATGAAAACAAAAGGAAGCAAAAA	59.343	30.769	0.00	0.00	0.00	1.94
79	80	6.176183	TCCATGAAAACAAAAGGAAGCAAAA	58.824	32.000	0.00	0.00	0.00	2.44
80	81	5.738909	TCCATGAAAACAAAAGGAAGCAAA	58.261	33.333	0.00	0.00	0.00	3.68
81	82	5.350504	TCCATGAAAACAAAAGGAAGCAA	57.649	34.783	0.00	0.00	0.00	3.91
82	83	5.350504	TTCCATGAAAACAAAAGGAAGCA	57.649	34.783	0.00	0.00	31.93	3.91
83	84	5.990996	TGATTCCATGAAAACAAAAGGAAGC	59.009	36.000	0.00	0.00	40.78	3.86
84	85	7.172019	CCTTGATTCCATGAAAACAAAAGGAAG	59.828	37.037	0.00	0.00	38.41	3.46
85	86	6.991531	CCTTGATTCCATGAAAACAAAAGGAA	59.008	34.615	0.00	0.00	39.24	3.36
86	87	6.326064	TCCTTGATTCCATGAAAACAAAAGGA	59.674	34.615	0.00	5.64	0.00	3.36
87	88	6.424812	GTCCTTGATTCCATGAAAACAAAAGG	59.575	38.462	0.00	3.56	0.00	3.11
88	89	7.212274	AGTCCTTGATTCCATGAAAACAAAAG	58.788	34.615	0.00	0.00	0.00	2.27
89	90	7.123355	AGTCCTTGATTCCATGAAAACAAAA	57.877	32.000	0.00	0.00	0.00	2.44
90	91	6.729690	AGTCCTTGATTCCATGAAAACAAA	57.270	33.333	0.00	0.00	0.00	2.83
91	92	9.177608	CTATAGTCCTTGATTCCATGAAAACAA	57.822	33.333	0.00	0.00	0.00	2.83
92	93	8.548025	TCTATAGTCCTTGATTCCATGAAAACA	58.452	33.333	0.00	0.00	0.00	2.83
93	94	8.964476	TCTATAGTCCTTGATTCCATGAAAAC	57.036	34.615	0.00	0.00	0.00	2.43
94	95	7.716998	GCTCTATAGTCCTTGATTCCATGAAAA	59.283	37.037	0.00	0.00	0.00	2.29
95	96	7.071698	AGCTCTATAGTCCTTGATTCCATGAAA	59.928	37.037	0.00	0.00	0.00	2.69
96	97	6.556495	AGCTCTATAGTCCTTGATTCCATGAA	59.444	38.462	0.00	0.00	0.00	2.57
97	98	6.014755	CAGCTCTATAGTCCTTGATTCCATGA	60.015	42.308	0.00	0.00	0.00	3.07
98	99	6.164876	CAGCTCTATAGTCCTTGATTCCATG	58.835	44.000	0.00	0.00	0.00	3.66
99	100	5.843421	ACAGCTCTATAGTCCTTGATTCCAT	59.157	40.000	0.00	0.00	0.00	3.41
100	101	5.211973	ACAGCTCTATAGTCCTTGATTCCA	58.788	41.667	0.00	0.00	0.00	3.53
101	102	5.799827	ACAGCTCTATAGTCCTTGATTCC	57.200	43.478	0.00	0.00	0.00	3.01
102	103	5.465056	GCAACAGCTCTATAGTCCTTGATTC	59.535	44.000	0.00	0.00	0.00	2.52
103	104	5.130145	AGCAACAGCTCTATAGTCCTTGATT	59.870	40.000	0.00	0.00	31.68	2.57
104	105	4.653341	AGCAACAGCTCTATAGTCCTTGAT	59.347	41.667	0.00	0.00	31.68	2.57
105	106	4.026744	AGCAACAGCTCTATAGTCCTTGA	58.973	43.478	0.00	0.00	31.68	3.02
106	107	4.399004	AGCAACAGCTCTATAGTCCTTG	57.601	45.455	0.00	0.00	31.68	3.61
118	119	4.466370	TGTAACTACTATGGAGCAACAGCT	59.534	41.667	0.00	0.00	42.41	4.24
119	120	4.755411	TGTAACTACTATGGAGCAACAGC	58.245	43.478	0.00	0.00	0.00	4.40
120	121	7.667043	TTTTGTAACTACTATGGAGCAACAG	57.333	36.000	0.00	0.00	0.00	3.16
121	122	7.040961	GGTTTTTGTAACTACTATGGAGCAACA	60.041	37.037	0.00	0.00	0.00	3.33
122	123	7.303261	GGTTTTTGTAACTACTATGGAGCAAC	58.697	38.462	0.00	0.00	0.00	4.17
123	124	6.431852	GGGTTTTTGTAACTACTATGGAGCAA	59.568	38.462	0.00	0.00	0.00	3.91
124	125	5.941647	GGGTTTTTGTAACTACTATGGAGCA	59.058	40.000	0.00	0.00	0.00	4.26
125	126	6.178324	AGGGTTTTTGTAACTACTATGGAGC	58.822	40.000	0.00	0.00	0.00	4.70
126	127	7.985752	CCTAGGGTTTTTGTAACTACTATGGAG	59.014	40.741	0.00	0.00	0.00	3.86
127	128	7.458806	ACCTAGGGTTTTTGTAACTACTATGGA	59.541	37.037	14.81	0.00	27.29	3.41
128	129	7.627311	ACCTAGGGTTTTTGTAACTACTATGG	58.373	38.462	14.81	0.00	27.29	2.74
145	146	8.777578	AGTGAAAATAAAGAAAAACCTAGGGT	57.222	30.769	14.81	2.44	37.65	4.34
162	163	9.975218	AAGGATTGTAATGGTACTAGTGAAAAT	57.025	29.630	5.39	0.00	0.00	1.82
163	164	9.444600	GAAGGATTGTAATGGTACTAGTGAAAA	57.555	33.333	5.39	0.00	0.00	2.29
164	165	8.598916	TGAAGGATTGTAATGGTACTAGTGAAA	58.401	33.333	5.39	0.00	0.00	2.69
165	166	8.038944	GTGAAGGATTGTAATGGTACTAGTGAA	58.961	37.037	5.39	0.00	0.00	3.18
166	167	7.179516	TGTGAAGGATTGTAATGGTACTAGTGA	59.820	37.037	5.39	0.00	0.00	3.41
167	168	7.327975	TGTGAAGGATTGTAATGGTACTAGTG	58.672	38.462	5.39	0.00	0.00	2.74
168	169	7.490657	TGTGAAGGATTGTAATGGTACTAGT	57.509	36.000	0.00	0.00	0.00	2.57
169	170	8.786826	TTTGTGAAGGATTGTAATGGTACTAG	57.213	34.615	0.00	0.00	0.00	2.57
171	172	9.396022	CTATTTGTGAAGGATTGTAATGGTACT	57.604	33.333	0.00	0.00	0.00	2.73
172	173	8.129211	GCTATTTGTGAAGGATTGTAATGGTAC	58.871	37.037	0.00	0.00	0.00	3.34
173	174	8.052748	AGCTATTTGTGAAGGATTGTAATGGTA	58.947	33.333	0.00	0.00	0.00	3.25
174	175	6.891908	AGCTATTTGTGAAGGATTGTAATGGT	59.108	34.615	0.00	0.00	0.00	3.55
175	176	7.067372	TGAGCTATTTGTGAAGGATTGTAATGG	59.933	37.037	0.00	0.00	0.00	3.16
176	177	7.988737	TGAGCTATTTGTGAAGGATTGTAATG	58.011	34.615	0.00	0.00	0.00	1.90
177	178	7.284034	CCTGAGCTATTTGTGAAGGATTGTAAT	59.716	37.037	0.00	0.00	0.00	1.89
178	179	6.599244	CCTGAGCTATTTGTGAAGGATTGTAA	59.401	38.462	0.00	0.00	0.00	2.41
179	180	6.115446	CCTGAGCTATTTGTGAAGGATTGTA	58.885	40.000	0.00	0.00	0.00	2.41
180	181	4.946157	CCTGAGCTATTTGTGAAGGATTGT	59.054	41.667	0.00	0.00	0.00	2.71
181	182	4.201990	GCCTGAGCTATTTGTGAAGGATTG	60.202	45.833	0.00	0.00	35.50	2.67
182	183	3.950395	GCCTGAGCTATTTGTGAAGGATT	59.050	43.478	0.00	0.00	35.50	3.01
183	184	3.054139	TGCCTGAGCTATTTGTGAAGGAT	60.054	43.478	0.00	0.00	40.80	3.24
184	185	2.305635	TGCCTGAGCTATTTGTGAAGGA	59.694	45.455	0.00	0.00	40.80	3.36
185	186	2.715046	TGCCTGAGCTATTTGTGAAGG	58.285	47.619	0.00	0.00	40.80	3.46
186	187	4.771590	TTTGCCTGAGCTATTTGTGAAG	57.228	40.909	0.00	0.00	40.80	3.02
187	188	4.584325	ACTTTTGCCTGAGCTATTTGTGAA	59.416	37.500	0.00	0.00	40.80	3.18
188	189	4.144297	ACTTTTGCCTGAGCTATTTGTGA	58.856	39.130	0.00	0.00	40.80	3.58
189	190	4.510038	ACTTTTGCCTGAGCTATTTGTG	57.490	40.909	0.00	0.00	40.80	3.33
190	191	4.021981	GGAACTTTTGCCTGAGCTATTTGT	60.022	41.667	0.00	0.00	40.80	2.83
191	192	4.022068	TGGAACTTTTGCCTGAGCTATTTG	60.022	41.667	0.00	0.00	40.80	2.32
192	193	4.151883	TGGAACTTTTGCCTGAGCTATTT	58.848	39.130	0.00	0.00	40.80	1.40
193	194	3.766545	TGGAACTTTTGCCTGAGCTATT	58.233	40.909	0.00	0.00	40.80	1.73
194	195	3.439857	TGGAACTTTTGCCTGAGCTAT	57.560	42.857	0.00	0.00	40.80	2.97
195	196	2.949177	TGGAACTTTTGCCTGAGCTA	57.051	45.000	0.00	0.00	40.80	3.32
196	197	2.299326	ATGGAACTTTTGCCTGAGCT	57.701	45.000	0.00	0.00	40.80	4.09
197	198	4.725790	ATTATGGAACTTTTGCCTGAGC	57.274	40.909	0.00	0.00	40.48	4.26
198	199	7.396540	ACTTATTATGGAACTTTTGCCTGAG	57.603	36.000	0.00	0.00	0.00	3.35
199	200	9.474313	AATACTTATTATGGAACTTTTGCCTGA	57.526	29.630	0.00	0.00	0.00	3.86
200	201	9.520204	CAATACTTATTATGGAACTTTTGCCTG	57.480	33.333	0.00	0.00	0.00	4.85
201	202	9.474313	TCAATACTTATTATGGAACTTTTGCCT	57.526	29.630	0.00	0.00	0.00	4.75
208	209	9.632638	ACAGCATTCAATACTTATTATGGAACT	57.367	29.630	0.00	0.00	33.58	3.01
209	210	9.884465	GACAGCATTCAATACTTATTATGGAAC	57.116	33.333	0.00	0.00	33.58	3.62
210	211	8.773645	CGACAGCATTCAATACTTATTATGGAA	58.226	33.333	0.00	0.00	35.01	3.53
211	212	7.095229	GCGACAGCATTCAATACTTATTATGGA	60.095	37.037	0.00	0.00	44.35	3.41
212	213	7.017645	GCGACAGCATTCAATACTTATTATGG	58.982	38.462	0.00	0.00	44.35	2.74
213	214	7.999699	GCGACAGCATTCAATACTTATTATG	57.000	36.000	0.00	0.00	44.35	1.90
230	231	3.230355	CTGAACTCGATATAGCGACAGC	58.770	50.000	9.38	2.09	45.58	4.40
231	232	4.475763	ACTGAACTCGATATAGCGACAG	57.524	45.455	21.08	21.08	37.69	3.51
232	233	4.895224	AACTGAACTCGATATAGCGACA	57.105	40.909	9.38	5.53	36.17	4.35
233	234	6.225703	TCTAACTGAACTCGATATAGCGAC	57.774	41.667	9.38	0.53	36.17	5.19
234	235	7.388224	AGAATCTAACTGAACTCGATATAGCGA	59.612	37.037	13.12	13.12	38.74	4.93
235	236	7.523219	AGAATCTAACTGAACTCGATATAGCG	58.477	38.462	3.47	3.47	0.00	4.26
264	265	8.780249	GCTAAAGAAGTTTTGTTGGTCAGTATA	58.220	33.333	0.00	0.00	0.00	1.47
265	266	7.284489	TGCTAAAGAAGTTTTGTTGGTCAGTAT	59.716	33.333	0.00	0.00	0.00	2.12
266	267	6.600032	TGCTAAAGAAGTTTTGTTGGTCAGTA	59.400	34.615	0.00	0.00	0.00	2.74
267	268	5.417580	TGCTAAAGAAGTTTTGTTGGTCAGT	59.582	36.000	0.00	0.00	0.00	3.41
268	269	5.890334	TGCTAAAGAAGTTTTGTTGGTCAG	58.110	37.500	0.00	0.00	0.00	3.51
269	270	5.906113	TGCTAAAGAAGTTTTGTTGGTCA	57.094	34.783	0.00	0.00	0.00	4.02
270	271	5.748630	CCTTGCTAAAGAAGTTTTGTTGGTC	59.251	40.000	0.00	0.00	35.19	4.02
271	272	5.395214	CCCTTGCTAAAGAAGTTTTGTTGGT	60.395	40.000	0.00	0.00	35.19	3.67
272	273	5.049828	CCCTTGCTAAAGAAGTTTTGTTGG	58.950	41.667	0.00	0.00	35.19	3.77
273	274	5.660460	ACCCTTGCTAAAGAAGTTTTGTTG	58.340	37.500	0.00	0.00	35.19	3.33
274	275	5.656859	AGACCCTTGCTAAAGAAGTTTTGTT	59.343	36.000	0.00	0.00	35.19	2.83
275	276	5.201243	AGACCCTTGCTAAAGAAGTTTTGT	58.799	37.500	0.00	0.00	35.19	2.83
276	277	5.774498	AGACCCTTGCTAAAGAAGTTTTG	57.226	39.130	0.00	0.00	35.19	2.44
277	278	7.231467	TCATAGACCCTTGCTAAAGAAGTTTT	58.769	34.615	0.00	0.00	35.19	2.43
278	279	6.779860	TCATAGACCCTTGCTAAAGAAGTTT	58.220	36.000	0.00	0.00	35.19	2.66
279	280	6.213600	TCTCATAGACCCTTGCTAAAGAAGTT	59.786	38.462	0.00	0.00	35.19	2.66
280	281	5.721960	TCTCATAGACCCTTGCTAAAGAAGT	59.278	40.000	0.00	0.00	35.19	3.01
281	282	6.227298	TCTCATAGACCCTTGCTAAAGAAG	57.773	41.667	0.00	0.00	35.19	2.85
282	283	6.440647	TCTTCTCATAGACCCTTGCTAAAGAA	59.559	38.462	0.00	0.00	35.19	2.52
283	284	5.958380	TCTTCTCATAGACCCTTGCTAAAGA	59.042	40.000	0.00	0.00	35.19	2.52
284	285	6.227298	TCTTCTCATAGACCCTTGCTAAAG	57.773	41.667	0.00	0.00	0.00	1.85
285	286	6.620877	TTCTTCTCATAGACCCTTGCTAAA	57.379	37.500	0.00	0.00	0.00	1.85
286	287	6.814954	ATTCTTCTCATAGACCCTTGCTAA	57.185	37.500	0.00	0.00	0.00	3.09
287	288	7.510685	ACATATTCTTCTCATAGACCCTTGCTA	59.489	37.037	0.00	0.00	0.00	3.49
288	289	6.328672	ACATATTCTTCTCATAGACCCTTGCT	59.671	38.462	0.00	0.00	0.00	3.91
289	290	6.529220	ACATATTCTTCTCATAGACCCTTGC	58.471	40.000	0.00	0.00	0.00	4.01
290	291	8.970859	AAACATATTCTTCTCATAGACCCTTG	57.029	34.615	0.00	0.00	0.00	3.61
291	292	8.772250	TGAAACATATTCTTCTCATAGACCCTT	58.228	33.333	0.00	0.00	0.00	3.95
292	293	8.324191	TGAAACATATTCTTCTCATAGACCCT	57.676	34.615	0.00	0.00	0.00	4.34
293	294	8.997323	CATGAAACATATTCTTCTCATAGACCC	58.003	37.037	0.00	0.00	0.00	4.46
294	295	9.770097	TCATGAAACATATTCTTCTCATAGACC	57.230	33.333	0.00	0.00	0.00	3.85
299	300	9.327628	CAGTCTCATGAAACATATTCTTCTCAT	57.672	33.333	1.27	0.00	0.00	2.90
300	301	7.767659	CCAGTCTCATGAAACATATTCTTCTCA	59.232	37.037	1.27	0.00	0.00	3.27
301	302	7.254727	GCCAGTCTCATGAAACATATTCTTCTC	60.255	40.741	1.27	0.00	0.00	2.87
302	303	6.541641	GCCAGTCTCATGAAACATATTCTTCT	59.458	38.462	1.27	0.00	0.00	2.85
303	304	6.541641	AGCCAGTCTCATGAAACATATTCTTC	59.458	38.462	1.27	0.00	0.00	2.87
304	305	6.421485	AGCCAGTCTCATGAAACATATTCTT	58.579	36.000	1.27	0.00	0.00	2.52
305	306	5.999044	AGCCAGTCTCATGAAACATATTCT	58.001	37.500	1.27	0.00	0.00	2.40
306	307	6.690194	AAGCCAGTCTCATGAAACATATTC	57.310	37.500	1.27	0.00	0.00	1.75
307	308	7.395489	AGAAAAGCCAGTCTCATGAAACATATT	59.605	33.333	1.27	0.00	0.00	1.28
308	309	6.888632	AGAAAAGCCAGTCTCATGAAACATAT	59.111	34.615	1.27	0.00	0.00	1.78
309	310	6.240894	AGAAAAGCCAGTCTCATGAAACATA	58.759	36.000	1.27	0.00	0.00	2.29
310	311	5.075493	AGAAAAGCCAGTCTCATGAAACAT	58.925	37.500	1.27	0.00	0.00	2.71
311	312	4.464008	AGAAAAGCCAGTCTCATGAAACA	58.536	39.130	1.27	0.00	0.00	2.83
312	313	5.703130	AGTAGAAAAGCCAGTCTCATGAAAC	59.297	40.000	0.00	0.00	0.00	2.78
313	314	5.869579	AGTAGAAAAGCCAGTCTCATGAAA	58.130	37.500	0.00	0.00	0.00	2.69
314	315	5.482908	GAGTAGAAAAGCCAGTCTCATGAA	58.517	41.667	0.00	0.00	0.00	2.57
315	316	4.081420	GGAGTAGAAAAGCCAGTCTCATGA	60.081	45.833	0.00	0.00	0.00	3.07
316	317	4.187694	GGAGTAGAAAAGCCAGTCTCATG	58.812	47.826	0.00	0.00	0.00	3.07
317	318	3.198853	GGGAGTAGAAAAGCCAGTCTCAT	59.801	47.826	0.00	0.00	0.00	2.90
318	319	2.567615	GGGAGTAGAAAAGCCAGTCTCA	59.432	50.000	0.00	0.00	0.00	3.27
319	320	2.417515	CGGGAGTAGAAAAGCCAGTCTC	60.418	54.545	0.00	0.00	0.00	3.36
320	321	1.550976	CGGGAGTAGAAAAGCCAGTCT	59.449	52.381	0.00	0.00	0.00	3.24
321	322	1.405661	CCGGGAGTAGAAAAGCCAGTC	60.406	57.143	0.00	0.00	0.00	3.51
322	323	0.613777	CCGGGAGTAGAAAAGCCAGT	59.386	55.000	0.00	0.00	0.00	4.00
323	324	0.107654	CCCGGGAGTAGAAAAGCCAG	60.108	60.000	18.48	0.00	0.00	4.85
324	325	1.559065	CCCCGGGAGTAGAAAAGCCA	61.559	60.000	26.32	0.00	0.00	4.75
325	326	1.223763	CCCCGGGAGTAGAAAAGCC	59.776	63.158	26.32	0.00	0.00	4.35
326	327	1.223763	CCCCCGGGAGTAGAAAAGC	59.776	63.158	26.32	0.00	37.50	3.51
327	328	0.540454	GACCCCCGGGAGTAGAAAAG	59.460	60.000	26.32	0.23	38.96	2.27
328	329	1.259840	CGACCCCCGGGAGTAGAAAA	61.260	60.000	26.32	0.00	38.96	2.29
329	330	1.683365	CGACCCCCGGGAGTAGAAA	60.683	63.158	26.32	0.00	38.96	2.52
330	331	2.043652	CGACCCCCGGGAGTAGAA	60.044	66.667	26.32	0.00	38.96	2.10
348	349	2.751806	CGAACGGGATAGTAGGGTATCC	59.248	54.545	1.82	1.82	45.60	2.59
349	350	3.416156	ACGAACGGGATAGTAGGGTATC	58.584	50.000	0.00	0.00	0.00	2.24
350	351	3.515602	ACGAACGGGATAGTAGGGTAT	57.484	47.619	0.00	0.00	0.00	2.73
351	352	3.214328	GAACGAACGGGATAGTAGGGTA	58.786	50.000	0.00	0.00	0.00	3.69
352	353	2.027385	GAACGAACGGGATAGTAGGGT	58.973	52.381	0.00	0.00	0.00	4.34
353	354	1.002033	CGAACGAACGGGATAGTAGGG	60.002	57.143	0.00	0.00	0.00	3.53
354	355	1.672881	ACGAACGAACGGGATAGTAGG	59.327	52.381	0.14	0.00	37.61	3.18
355	356	3.103738	CAACGAACGAACGGGATAGTAG	58.896	50.000	0.14	0.00	37.61	2.57
356	357	2.487762	ACAACGAACGAACGGGATAGTA	59.512	45.455	0.14	0.00	37.61	1.82
357	358	1.270550	ACAACGAACGAACGGGATAGT	59.729	47.619	0.14	0.00	37.61	2.12
358	359	1.986698	ACAACGAACGAACGGGATAG	58.013	50.000	0.14	0.00	37.61	2.08
359	360	2.487762	AGTACAACGAACGAACGGGATA	59.512	45.455	0.14	0.00	37.61	2.59
360	361	1.270550	AGTACAACGAACGAACGGGAT	59.729	47.619	0.14	0.00	37.61	3.85
361	362	0.667993	AGTACAACGAACGAACGGGA	59.332	50.000	0.14	0.00	37.61	5.14
362	363	1.190763	CAAGTACAACGAACGAACGGG	59.809	52.381	0.14	5.17	37.61	5.28
363	364	1.854126	ACAAGTACAACGAACGAACGG	59.146	47.619	0.14	0.00	37.61	4.44
364	365	2.785477	AGACAAGTACAACGAACGAACG	59.215	45.455	0.14	0.00	39.31	3.95
365	366	4.502558	CAAGACAAGTACAACGAACGAAC	58.497	43.478	0.14	0.00	0.00	3.95
366	367	3.000523	GCAAGACAAGTACAACGAACGAA	59.999	43.478	0.14	0.00	0.00	3.85
367	368	2.536803	GCAAGACAAGTACAACGAACGA	59.463	45.455	0.14	0.00	0.00	3.85
368	369	2.348218	GGCAAGACAAGTACAACGAACG	60.348	50.000	0.00	0.00	0.00	3.95
369	370	2.870411	AGGCAAGACAAGTACAACGAAC	59.130	45.455	0.00	0.00	0.00	3.95
370	371	3.128349	GAGGCAAGACAAGTACAACGAA	58.872	45.455	0.00	0.00	0.00	3.85
371	372	2.750948	GAGGCAAGACAAGTACAACGA	58.249	47.619	0.00	0.00	0.00	3.85
372	373	1.455786	CGAGGCAAGACAAGTACAACG	59.544	52.381	0.00	0.00	0.00	4.10
373	374	1.194772	GCGAGGCAAGACAAGTACAAC	59.805	52.381	0.00	0.00	0.00	3.32
374	375	1.508632	GCGAGGCAAGACAAGTACAA	58.491	50.000	0.00	0.00	0.00	2.41
375	376	0.666274	CGCGAGGCAAGACAAGTACA	60.666	55.000	0.00	0.00	0.00	2.90
376	377	0.388134	TCGCGAGGCAAGACAAGTAC	60.388	55.000	3.71	0.00	0.00	2.73
377	378	0.530744	ATCGCGAGGCAAGACAAGTA	59.469	50.000	16.66	0.00	0.00	2.24
378	379	0.737715	GATCGCGAGGCAAGACAAGT	60.738	55.000	16.66	0.00	0.00	3.16
379	380	1.424493	GGATCGCGAGGCAAGACAAG	61.424	60.000	16.66	0.00	0.00	3.16
380	381	1.447838	GGATCGCGAGGCAAGACAA	60.448	57.895	16.66	0.00	0.00	3.18
381	382	2.184322	GGATCGCGAGGCAAGACA	59.816	61.111	16.66	0.00	0.00	3.41
382	383	2.332362	TACGGATCGCGAGGCAAGAC	62.332	60.000	16.66	0.00	0.00	3.01
383	384	2.116533	TACGGATCGCGAGGCAAGA	61.117	57.895	16.66	0.00	0.00	3.02
384	385	1.944676	GTACGGATCGCGAGGCAAG	60.945	63.158	16.66	9.57	0.00	4.01
385	386	2.103538	GTACGGATCGCGAGGCAA	59.896	61.111	16.66	0.00	0.00	4.52
386	387	3.896133	GGTACGGATCGCGAGGCA	61.896	66.667	16.66	0.00	0.00	4.75
387	388	4.642542	GGGTACGGATCGCGAGGC	62.643	72.222	16.66	9.24	0.00	4.70
388	389	2.905880	AGGGTACGGATCGCGAGG	60.906	66.667	16.66	9.08	0.00	4.63
389	390	2.331805	CAGGGTACGGATCGCGAG	59.668	66.667	16.66	3.14	0.00	5.03
390	391	3.214123	CCAGGGTACGGATCGCGA	61.214	66.667	13.09	13.09	0.00	5.87
391	392	3.480225	GACCAGGGTACGGATCGCG	62.480	68.421	0.00	0.00	0.00	5.87
392	393	2.125961	AGACCAGGGTACGGATCGC	61.126	63.158	0.00	0.00	0.00	4.58
393	394	1.734137	CAGACCAGGGTACGGATCG	59.266	63.158	0.00	0.00	0.00	3.69
394	395	1.442148	GCAGACCAGGGTACGGATC	59.558	63.158	0.00	0.00	0.00	3.36
395	396	2.064581	GGCAGACCAGGGTACGGAT	61.065	63.158	0.00	0.00	35.26	4.18
396	397	2.682494	GGCAGACCAGGGTACGGA	60.682	66.667	0.00	0.00	35.26	4.69
397	398	3.000819	TGGCAGACCAGGGTACGG	61.001	66.667	0.00	0.00	42.67	4.02
406	407	5.594926	CAAATCAAAATAGGATGGCAGACC	58.405	41.667	5.52	5.52	0.00	3.85
407	408	5.045872	GCAAATCAAAATAGGATGGCAGAC	58.954	41.667	0.00	0.00	0.00	3.51
408	409	4.710865	TGCAAATCAAAATAGGATGGCAGA	59.289	37.500	0.00	0.00	33.59	4.26
409	410	5.013568	TGCAAATCAAAATAGGATGGCAG	57.986	39.130	0.00	0.00	33.59	4.85
410	411	4.141892	CCTGCAAATCAAAATAGGATGGCA	60.142	41.667	0.00	0.00	35.73	4.92
411	412	4.374399	CCTGCAAATCAAAATAGGATGGC	58.626	43.478	0.00	0.00	0.00	4.40
412	413	4.374399	GCCTGCAAATCAAAATAGGATGG	58.626	43.478	0.00	0.00	0.00	3.51
413	414	4.100498	AGGCCTGCAAATCAAAATAGGATG	59.900	41.667	3.11	0.00	0.00	3.51
414	415	4.292643	AGGCCTGCAAATCAAAATAGGAT	58.707	39.130	3.11	0.00	0.00	3.24
415	416	3.711863	AGGCCTGCAAATCAAAATAGGA	58.288	40.909	3.11	0.00	0.00	2.94
416	417	4.038402	CCTAGGCCTGCAAATCAAAATAGG	59.962	45.833	17.99	5.09	0.00	2.57
417	418	4.646492	ACCTAGGCCTGCAAATCAAAATAG	59.354	41.667	17.99	0.00	0.00	1.73
418	419	4.402155	CACCTAGGCCTGCAAATCAAAATA	59.598	41.667	17.99	0.00	0.00	1.40
419	420	3.196254	CACCTAGGCCTGCAAATCAAAAT	59.804	43.478	17.99	0.00	0.00	1.82
420	421	2.562298	CACCTAGGCCTGCAAATCAAAA	59.438	45.455	17.99	0.00	0.00	2.44
421	422	2.170166	CACCTAGGCCTGCAAATCAAA	58.830	47.619	17.99	0.00	0.00	2.69
422	423	1.075374	ACACCTAGGCCTGCAAATCAA	59.925	47.619	17.99	0.00	0.00	2.57
423	424	0.698238	ACACCTAGGCCTGCAAATCA	59.302	50.000	17.99	0.00	0.00	2.57
424	425	2.289565	GTACACCTAGGCCTGCAAATC	58.710	52.381	17.99	0.00	0.00	2.17
425	426	1.633432	TGTACACCTAGGCCTGCAAAT	59.367	47.619	17.99	0.03	0.00	2.32
426	427	1.003118	CTGTACACCTAGGCCTGCAAA	59.997	52.381	17.99	0.00	0.00	3.68
427	428	0.613260	CTGTACACCTAGGCCTGCAA	59.387	55.000	17.99	0.00	0.00	4.08
428	429	0.544357	ACTGTACACCTAGGCCTGCA	60.544	55.000	17.99	2.68	0.00	4.41
429	430	1.481871	TACTGTACACCTAGGCCTGC	58.518	55.000	17.99	0.00	0.00	4.85
430	431	4.281182	CCTATTACTGTACACCTAGGCCTG	59.719	50.000	17.99	0.87	0.00	4.85
431	432	4.169461	TCCTATTACTGTACACCTAGGCCT	59.831	45.833	11.78	11.78	0.00	5.19
432	433	4.477249	TCCTATTACTGTACACCTAGGCC	58.523	47.826	9.30	0.00	0.00	5.19
433	434	4.022155	GCTCCTATTACTGTACACCTAGGC	60.022	50.000	9.30	0.00	0.00	3.93
434	435	5.138276	TGCTCCTATTACTGTACACCTAGG	58.862	45.833	7.41	7.41	0.00	3.02
435	436	6.717540	AGATGCTCCTATTACTGTACACCTAG	59.282	42.308	0.00	0.00	0.00	3.02
436	437	6.611785	AGATGCTCCTATTACTGTACACCTA	58.388	40.000	0.00	0.00	0.00	3.08
437	438	5.459505	AGATGCTCCTATTACTGTACACCT	58.540	41.667	0.00	0.00	0.00	4.00
438	439	5.536916	AGAGATGCTCCTATTACTGTACACC	59.463	44.000	0.00	0.00	0.00	4.16
439	440	6.263392	TCAGAGATGCTCCTATTACTGTACAC	59.737	42.308	0.00	0.00	0.00	2.90
440	441	6.365520	TCAGAGATGCTCCTATTACTGTACA	58.634	40.000	0.00	0.00	0.00	2.90
441	442	6.885952	TCAGAGATGCTCCTATTACTGTAC	57.114	41.667	0.00	0.00	0.00	2.90
442	443	9.183368	CATATCAGAGATGCTCCTATTACTGTA	57.817	37.037	0.00	0.00	0.00	2.74
443	444	7.892771	TCATATCAGAGATGCTCCTATTACTGT	59.107	37.037	0.00	0.00	0.00	3.55
444	445	8.190122	GTCATATCAGAGATGCTCCTATTACTG	58.810	40.741	0.00	0.00	0.00	2.74
445	446	7.066887	CGTCATATCAGAGATGCTCCTATTACT	59.933	40.741	0.00	0.00	0.00	2.24
446	447	7.148154	ACGTCATATCAGAGATGCTCCTATTAC	60.148	40.741	0.00	0.00	0.00	1.89
447	448	6.887002	ACGTCATATCAGAGATGCTCCTATTA	59.113	38.462	0.00	0.00	0.00	0.98
448	449	5.714333	ACGTCATATCAGAGATGCTCCTATT	59.286	40.000	0.00	0.00	0.00	1.73
449	450	5.260424	ACGTCATATCAGAGATGCTCCTAT	58.740	41.667	0.00	0.00	0.00	2.57
450	451	4.657013	ACGTCATATCAGAGATGCTCCTA	58.343	43.478	0.00	0.00	0.00	2.94
451	452	3.495331	ACGTCATATCAGAGATGCTCCT	58.505	45.455	0.00	0.00	0.00	3.69
452	453	3.669290	CGACGTCATATCAGAGATGCTCC	60.669	52.174	17.16	0.00	0.00	4.70
453	454	3.058570	ACGACGTCATATCAGAGATGCTC	60.059	47.826	17.16	0.00	0.00	4.26
454	455	2.881513	ACGACGTCATATCAGAGATGCT	59.118	45.455	17.16	0.00	0.00	3.79
455	456	3.275400	ACGACGTCATATCAGAGATGC	57.725	47.619	17.16	0.00	0.00	3.91
456	457	5.344207	TGTACGACGTCATATCAGAGATG	57.656	43.478	17.16	0.00	0.00	2.90
457	458	6.649557	TGTATGTACGACGTCATATCAGAGAT	59.350	38.462	17.16	0.00	0.00	2.75
458	459	5.987347	TGTATGTACGACGTCATATCAGAGA	59.013	40.000	17.16	2.30	0.00	3.10
459	460	6.072098	GTGTATGTACGACGTCATATCAGAG	58.928	44.000	17.16	0.00	0.00	3.35
460	461	5.524646	TGTGTATGTACGACGTCATATCAGA	59.475	40.000	17.16	8.91	0.00	3.27
461	462	5.620011	GTGTGTATGTACGACGTCATATCAG	59.380	44.000	17.16	0.00	0.00	2.90
462	463	5.295045	AGTGTGTATGTACGACGTCATATCA	59.705	40.000	17.16	9.05	0.00	2.15
463	464	5.620011	CAGTGTGTATGTACGACGTCATATC	59.380	44.000	17.16	9.99	0.00	1.63
464	465	5.295045	TCAGTGTGTATGTACGACGTCATAT	59.705	40.000	17.16	3.39	0.00	1.78
465	466	4.630940	TCAGTGTGTATGTACGACGTCATA	59.369	41.667	17.16	9.63	0.00	2.15
466	467	3.437741	TCAGTGTGTATGTACGACGTCAT	59.562	43.478	17.16	10.63	0.00	3.06
467	468	2.807392	TCAGTGTGTATGTACGACGTCA	59.193	45.455	17.16	2.96	0.00	4.35
468	469	3.414464	CTCAGTGTGTATGTACGACGTC	58.586	50.000	2.43	5.18	0.00	4.34
469	470	2.413765	GCTCAGTGTGTATGTACGACGT	60.414	50.000	5.52	5.52	0.00	4.34
470	471	2.174764	GCTCAGTGTGTATGTACGACG	58.825	52.381	0.00	0.00	0.00	5.12
471	472	2.094906	TGGCTCAGTGTGTATGTACGAC	60.095	50.000	0.00	0.00	0.00	4.34
472	473	2.164338	TGGCTCAGTGTGTATGTACGA	58.836	47.619	0.00	0.00	0.00	3.43
473	474	2.647529	TGGCTCAGTGTGTATGTACG	57.352	50.000	0.00	0.00	0.00	3.67
474	475	4.115516	CAGATGGCTCAGTGTGTATGTAC	58.884	47.826	0.00	0.00	0.00	2.90
475	476	3.430790	GCAGATGGCTCAGTGTGTATGTA	60.431	47.826	0.00	0.00	40.25	2.29
476	477	2.679059	GCAGATGGCTCAGTGTGTATGT	60.679	50.000	0.00	0.00	40.25	2.29
477	478	1.938577	GCAGATGGCTCAGTGTGTATG	59.061	52.381	0.00	0.00	40.25	2.39
478	479	1.556451	TGCAGATGGCTCAGTGTGTAT	59.444	47.619	0.00	0.00	45.15	2.29
479	480	0.975887	TGCAGATGGCTCAGTGTGTA	59.024	50.000	0.00	0.00	45.15	2.90
480	481	0.604780	GTGCAGATGGCTCAGTGTGT	60.605	55.000	0.00	0.00	45.15	3.72
481	482	1.303799	GGTGCAGATGGCTCAGTGTG	61.304	60.000	0.00	0.00	45.15	3.82
482	483	1.002868	GGTGCAGATGGCTCAGTGT	60.003	57.895	0.00	0.00	45.15	3.55
483	484	1.025113	CAGGTGCAGATGGCTCAGTG	61.025	60.000	0.00	0.00	45.15	3.66
484	485	1.298993	CAGGTGCAGATGGCTCAGT	59.701	57.895	0.00	0.00	45.15	3.41
485	486	1.025113	CACAGGTGCAGATGGCTCAG	61.025	60.000	3.33	0.00	45.15	3.35
486	487	1.002990	CACAGGTGCAGATGGCTCA	60.003	57.895	3.33	0.00	45.15	4.26
487	488	1.002868	ACACAGGTGCAGATGGCTC	60.003	57.895	0.00	0.00	45.15	4.70
488	489	1.303074	CACACAGGTGCAGATGGCT	60.303	57.895	0.00	0.00	45.15	4.75
489	490	3.271014	CACACAGGTGCAGATGGC	58.729	61.111	0.00	0.00	45.13	4.40
498	499	1.491668	TATGTATCCCGCACACAGGT	58.508	50.000	0.00	0.00	0.00	4.00
499	500	2.807967	CAATATGTATCCCGCACACAGG	59.192	50.000	0.00	0.00	0.00	4.00
500	501	3.466836	ACAATATGTATCCCGCACACAG	58.533	45.455	0.00	0.00	0.00	3.66
501	502	3.552132	ACAATATGTATCCCGCACACA	57.448	42.857	0.00	0.00	0.00	3.72
502	503	4.893424	AAACAATATGTATCCCGCACAC	57.107	40.909	0.00	0.00	0.00	3.82
503	504	4.513692	GCTAAACAATATGTATCCCGCACA	59.486	41.667	0.00	0.00	0.00	4.57
504	505	4.513692	TGCTAAACAATATGTATCCCGCAC	59.486	41.667	0.00	0.00	0.00	5.34
505	506	4.709250	TGCTAAACAATATGTATCCCGCA	58.291	39.130	0.00	0.00	0.00	5.69
506	507	5.880054	ATGCTAAACAATATGTATCCCGC	57.120	39.130	0.00	0.00	0.00	6.13
522	523	9.357652	GCATGTGAAGAGAAAATTTTATGCTAA	57.642	29.630	17.62	2.91	35.57	3.09
523	524	8.522003	TGCATGTGAAGAGAAAATTTTATGCTA	58.478	29.630	22.11	12.10	38.32	3.49
524	525	7.380536	TGCATGTGAAGAGAAAATTTTATGCT	58.619	30.769	22.11	10.20	38.32	3.79
525	526	7.585286	TGCATGTGAAGAGAAAATTTTATGC	57.415	32.000	17.89	17.89	38.07	3.14
529	530	8.949177	ACTTTTTGCATGTGAAGAGAAAATTTT	58.051	25.926	2.28	2.28	0.00	1.82
530	531	8.392612	CACTTTTTGCATGTGAAGAGAAAATTT	58.607	29.630	0.00	0.00	33.21	1.82
531	532	7.550196	ACACTTTTTGCATGTGAAGAGAAAATT	59.450	29.630	13.84	0.00	35.08	1.82
532	533	7.043565	ACACTTTTTGCATGTGAAGAGAAAAT	58.956	30.769	13.84	0.00	35.08	1.82
533	534	6.397272	ACACTTTTTGCATGTGAAGAGAAAA	58.603	32.000	13.84	2.79	35.08	2.29
534	535	5.964758	ACACTTTTTGCATGTGAAGAGAAA	58.035	33.333	13.84	0.00	35.08	2.52
535	536	5.581126	ACACTTTTTGCATGTGAAGAGAA	57.419	34.783	13.84	0.00	35.08	2.87
536	537	5.357878	AGAACACTTTTTGCATGTGAAGAGA	59.642	36.000	13.84	0.00	35.08	3.10
537	538	5.457799	CAGAACACTTTTTGCATGTGAAGAG	59.542	40.000	13.84	1.76	35.08	2.85
538	539	5.105797	ACAGAACACTTTTTGCATGTGAAGA	60.106	36.000	13.84	0.00	35.08	2.87
539	540	5.104374	ACAGAACACTTTTTGCATGTGAAG	58.896	37.500	13.84	6.90	35.08	3.02
540	541	5.070770	ACAGAACACTTTTTGCATGTGAA	57.929	34.783	13.84	0.00	35.08	3.18
541	542	4.671377	GACAGAACACTTTTTGCATGTGA	58.329	39.130	13.84	0.00	35.08	3.58
542	543	3.483196	CGACAGAACACTTTTTGCATGTG	59.517	43.478	0.00	0.00	36.74	3.21
543	544	3.128589	ACGACAGAACACTTTTTGCATGT	59.871	39.130	0.00	0.00	0.00	3.21
544	545	3.694734	ACGACAGAACACTTTTTGCATG	58.305	40.909	0.00	0.00	0.00	4.06
545	546	4.096382	AGAACGACAGAACACTTTTTGCAT	59.904	37.500	0.00	0.00	0.00	3.96
546	547	3.438781	AGAACGACAGAACACTTTTTGCA	59.561	39.130	0.00	0.00	0.00	4.08
547	548	3.786048	CAGAACGACAGAACACTTTTTGC	59.214	43.478	0.00	0.00	0.00	3.68
548	549	3.786048	GCAGAACGACAGAACACTTTTTG	59.214	43.478	0.00	0.00	0.00	2.44
549	550	3.689649	AGCAGAACGACAGAACACTTTTT	59.310	39.130	0.00	0.00	0.00	1.94
550	551	3.270877	AGCAGAACGACAGAACACTTTT	58.729	40.909	0.00	0.00	0.00	2.27
551	552	2.906354	AGCAGAACGACAGAACACTTT	58.094	42.857	0.00	0.00	0.00	2.66
552	553	2.604046	AGCAGAACGACAGAACACTT	57.396	45.000	0.00	0.00	0.00	3.16
553	554	2.608261	GCTAGCAGAACGACAGAACACT	60.608	50.000	10.63	0.00	0.00	3.55
554	555	1.721926	GCTAGCAGAACGACAGAACAC	59.278	52.381	10.63	0.00	0.00	3.32
555	556	1.336887	GGCTAGCAGAACGACAGAACA	60.337	52.381	18.24	0.00	0.00	3.18
556	557	1.067495	AGGCTAGCAGAACGACAGAAC	60.067	52.381	18.24	0.00	0.00	3.01
557	558	1.067565	CAGGCTAGCAGAACGACAGAA	60.068	52.381	18.24	0.00	0.00	3.02
558	559	0.528017	CAGGCTAGCAGAACGACAGA	59.472	55.000	18.24	0.00	0.00	3.41
559	560	0.459237	CCAGGCTAGCAGAACGACAG	60.459	60.000	18.24	0.00	0.00	3.51
560	561	1.185618	ACCAGGCTAGCAGAACGACA	61.186	55.000	18.24	0.00	0.00	4.35
561	562	0.458716	GACCAGGCTAGCAGAACGAC	60.459	60.000	18.24	0.00	0.00	4.34
562	563	1.890894	GACCAGGCTAGCAGAACGA	59.109	57.895	18.24	0.00	0.00	3.85
563	564	1.517257	CGACCAGGCTAGCAGAACG	60.517	63.158	18.24	11.12	0.00	3.95
564	565	0.458716	GTCGACCAGGCTAGCAGAAC	60.459	60.000	18.24	0.00	0.00	3.01
565	566	1.605058	GGTCGACCAGGCTAGCAGAA	61.605	60.000	29.75	0.00	35.64	3.02
566	567	2.052690	GGTCGACCAGGCTAGCAGA	61.053	63.158	29.75	2.77	35.64	4.26
567	568	2.351244	TGGTCGACCAGGCTAGCAG	61.351	63.158	33.23	8.29	42.01	4.24
568	569	2.283604	TGGTCGACCAGGCTAGCA	60.284	61.111	33.23	8.16	42.01	3.49
576	577	1.066752	CGTCAACAGTGGTCGACCA	59.933	57.895	33.23	33.23	45.30	4.02
577	578	0.529119	AACGTCAACAGTGGTCGACC	60.529	55.000	28.17	28.17	0.00	4.79
578	579	1.005347	CAAACGTCAACAGTGGTCGAC	60.005	52.381	7.13	7.13	0.00	4.20
579	580	1.282817	CAAACGTCAACAGTGGTCGA	58.717	50.000	1.24	0.00	0.00	4.20
580	581	0.303493	CCAAACGTCAACAGTGGTCG	59.697	55.000	0.00	0.00	0.00	4.79
581	582	0.661020	CCCAAACGTCAACAGTGGTC	59.339	55.000	0.00	0.00	0.00	4.02
582	583	0.253610	TCCCAAACGTCAACAGTGGT	59.746	50.000	0.00	0.00	0.00	4.16
583	584	1.604604	ATCCCAAACGTCAACAGTGG	58.395	50.000	0.00	0.00	0.00	4.00
584	585	2.616376	TGAATCCCAAACGTCAACAGTG	59.384	45.455	0.00	0.00	0.00	3.66
585	586	2.925724	TGAATCCCAAACGTCAACAGT	58.074	42.857	0.00	0.00	0.00	3.55
586	587	3.980646	TTGAATCCCAAACGTCAACAG	57.019	42.857	0.00	0.00	0.00	3.16
595	596	1.339610	CGCACAGGTTTGAATCCCAAA	59.660	47.619	0.00	0.00	42.07	3.28
596	597	0.958091	CGCACAGGTTTGAATCCCAA	59.042	50.000	0.00	0.00	0.00	4.12
597	598	0.893270	CCGCACAGGTTTGAATCCCA	60.893	55.000	0.00	0.00	34.51	4.37
598	599	0.608035	TCCGCACAGGTTTGAATCCC	60.608	55.000	0.00	0.00	41.99	3.85
599	600	0.804989	CTCCGCACAGGTTTGAATCC	59.195	55.000	0.00	0.00	41.99	3.01
600	601	0.169009	GCTCCGCACAGGTTTGAATC	59.831	55.000	0.00	0.00	41.99	2.52
601	602	0.537143	TGCTCCGCACAGGTTTGAAT	60.537	50.000	0.00	0.00	41.99	2.57
602	603	0.537143	ATGCTCCGCACAGGTTTGAA	60.537	50.000	0.00	0.00	43.04	2.69
603	604	0.323302	TATGCTCCGCACAGGTTTGA	59.677	50.000	0.00	0.00	43.04	2.69
604	605	1.164411	TTATGCTCCGCACAGGTTTG	58.836	50.000	0.00	0.00	43.04	2.93
605	606	1.904287	TTTATGCTCCGCACAGGTTT	58.096	45.000	0.00	0.00	43.04	3.27
606	607	2.017049	GATTTATGCTCCGCACAGGTT	58.983	47.619	0.00	0.00	43.04	3.50
607	608	1.210478	AGATTTATGCTCCGCACAGGT	59.790	47.619	0.00	0.00	43.04	4.00
608	609	1.959042	AGATTTATGCTCCGCACAGG	58.041	50.000	0.00	0.00	43.04	4.00
609	610	3.492383	CAGTAGATTTATGCTCCGCACAG	59.508	47.826	0.00	0.00	43.04	3.66
610	611	3.457234	CAGTAGATTTATGCTCCGCACA	58.543	45.455	0.00	0.00	43.04	4.57
611	612	2.221981	GCAGTAGATTTATGCTCCGCAC	59.778	50.000	0.00	0.00	43.04	5.34
612	613	2.158971	TGCAGTAGATTTATGCTCCGCA	60.159	45.455	0.00	0.00	44.86	5.69
613	614	2.483876	TGCAGTAGATTTATGCTCCGC	58.516	47.619	0.00	0.00	40.62	5.54
614	615	4.122776	ACTTGCAGTAGATTTATGCTCCG	58.877	43.478	0.00	0.00	40.62	4.63
615	616	6.763610	AGTTACTTGCAGTAGATTTATGCTCC	59.236	38.462	0.00	0.00	40.62	4.70
616	617	7.778470	AGTTACTTGCAGTAGATTTATGCTC	57.222	36.000	0.00	0.00	40.62	4.26
617	618	9.838339	AATAGTTACTTGCAGTAGATTTATGCT	57.162	29.630	0.00	0.00	40.62	3.79
622	623	9.502091	TGACAAATAGTTACTTGCAGTAGATTT	57.498	29.630	0.00	1.55	31.47	2.17
623	624	9.672673	ATGACAAATAGTTACTTGCAGTAGATT	57.327	29.630	0.00	0.00	31.47	2.40
627	628	9.938280	ACTTATGACAAATAGTTACTTGCAGTA	57.062	29.630	0.00	0.00	0.00	2.74
628	629	8.848474	ACTTATGACAAATAGTTACTTGCAGT	57.152	30.769	0.00	0.00	0.00	4.40
629	630	9.155975	AGACTTATGACAAATAGTTACTTGCAG	57.844	33.333	0.00	0.00	0.00	4.41
633	634	9.298774	GCGTAGACTTATGACAAATAGTTACTT	57.701	33.333	0.00	0.00	0.00	2.24
634	635	7.919621	GGCGTAGACTTATGACAAATAGTTACT	59.080	37.037	0.00	0.00	0.00	2.24
635	636	7.096722	CGGCGTAGACTTATGACAAATAGTTAC	60.097	40.741	0.00	0.00	0.00	2.50
636	637	6.914215	CGGCGTAGACTTATGACAAATAGTTA	59.086	38.462	0.00	0.00	0.00	2.24
637	638	5.747197	CGGCGTAGACTTATGACAAATAGTT	59.253	40.000	0.00	0.00	0.00	2.24
638	639	5.163581	ACGGCGTAGACTTATGACAAATAGT	60.164	40.000	12.58	0.00	0.00	2.12
639	640	5.173312	CACGGCGTAGACTTATGACAAATAG	59.827	44.000	14.22	0.00	0.00	1.73
640	641	5.038683	CACGGCGTAGACTTATGACAAATA	58.961	41.667	14.22	0.00	0.00	1.40
641	642	3.863424	CACGGCGTAGACTTATGACAAAT	59.137	43.478	14.22	0.00	0.00	2.32
642	643	3.247442	CACGGCGTAGACTTATGACAAA	58.753	45.455	14.22	0.00	0.00	2.83
643	644	2.229543	ACACGGCGTAGACTTATGACAA	59.770	45.455	14.22	0.00	0.00	3.18
644	645	1.814394	ACACGGCGTAGACTTATGACA	59.186	47.619	14.22	0.00	0.00	3.58
645	646	2.159476	TCACACGGCGTAGACTTATGAC	60.159	50.000	14.22	0.00	0.00	3.06
646	647	2.086094	TCACACGGCGTAGACTTATGA	58.914	47.619	14.22	5.35	0.00	2.15
647	648	2.554806	TCACACGGCGTAGACTTATG	57.445	50.000	14.22	0.00	0.00	1.90
648	649	2.734492	GCTTCACACGGCGTAGACTTAT	60.734	50.000	14.22	0.00	0.00	1.73
649	650	1.401931	GCTTCACACGGCGTAGACTTA	60.402	52.381	14.22	0.00	0.00	2.24
650	651	0.666577	GCTTCACACGGCGTAGACTT	60.667	55.000	14.22	0.00	0.00	3.01
651	652	1.080705	GCTTCACACGGCGTAGACT	60.081	57.895	14.22	0.00	0.00	3.24
652	653	0.736325	ATGCTTCACACGGCGTAGAC	60.736	55.000	14.22	3.86	0.00	2.59
653	654	0.457853	GATGCTTCACACGGCGTAGA	60.458	55.000	14.22	11.59	0.00	2.59
654	655	0.458543	AGATGCTTCACACGGCGTAG	60.459	55.000	14.22	7.85	0.00	3.51
655	656	0.037697	AAGATGCTTCACACGGCGTA	60.038	50.000	14.22	0.00	0.00	4.42
656	657	1.301716	AAGATGCTTCACACGGCGT	60.302	52.632	6.77	6.77	0.00	5.68
657	658	1.133253	CAAGATGCTTCACACGGCG	59.867	57.895	4.80	4.80	0.00	6.46
658	659	1.154150	GCAAGATGCTTCACACGGC	60.154	57.895	2.07	0.00	40.96	5.68
679	680	9.698617	CCGTAACTAATAAGTCAAAAATGCTAC	57.301	33.333	0.00	0.00	33.75	3.58
680	681	9.439500	ACCGTAACTAATAAGTCAAAAATGCTA	57.561	29.630	0.00	0.00	33.75	3.49
681	682	8.331730	ACCGTAACTAATAAGTCAAAAATGCT	57.668	30.769	0.00	0.00	33.75	3.79
682	683	8.231837	TGACCGTAACTAATAAGTCAAAAATGC	58.768	33.333	0.00	0.00	33.75	3.56
685	686	9.328845	AGTTGACCGTAACTAATAAGTCAAAAA	57.671	29.630	5.07	0.00	39.16	1.94
686	687	8.891671	AGTTGACCGTAACTAATAAGTCAAAA	57.108	30.769	5.07	0.00	39.16	2.44
687	688	9.410556	GTAGTTGACCGTAACTAATAAGTCAAA	57.589	33.333	5.07	0.00	42.82	2.69
688	689	8.575589	TGTAGTTGACCGTAACTAATAAGTCAA	58.424	33.333	0.00	0.00	42.82	3.18
689	690	8.109705	TGTAGTTGACCGTAACTAATAAGTCA	57.890	34.615	0.00	0.00	42.82	3.41
690	691	7.699812	CCTGTAGTTGACCGTAACTAATAAGTC	59.300	40.741	0.00	0.00	42.82	3.01
691	692	7.177392	ACCTGTAGTTGACCGTAACTAATAAGT	59.823	37.037	0.00	0.00	42.82	2.24
692	693	7.542025	ACCTGTAGTTGACCGTAACTAATAAG	58.458	38.462	0.00	0.00	42.82	1.73
693	694	7.466746	ACCTGTAGTTGACCGTAACTAATAA	57.533	36.000	0.00	0.00	42.82	1.40
694	695	8.458843	GTTACCTGTAGTTGACCGTAACTAATA	58.541	37.037	0.00	0.00	42.82	0.98
695	696	5.990120	ACCTGTAGTTGACCGTAACTAAT	57.010	39.130	0.00	0.00	42.82	1.73
696	697	6.264292	TGTTACCTGTAGTTGACCGTAACTAA	59.736	38.462	0.00	0.00	42.82	2.24
697	698	5.767665	TGTTACCTGTAGTTGACCGTAACTA	59.232	40.000	0.00	0.00	40.31	2.24
698	699	4.584325	TGTTACCTGTAGTTGACCGTAACT	59.416	41.667	0.00	0.00	40.31	2.24
699	700	4.681483	GTGTTACCTGTAGTTGACCGTAAC	59.319	45.833	0.00	0.00	40.20	2.50
700	701	4.340666	TGTGTTACCTGTAGTTGACCGTAA	59.659	41.667	0.00	0.00	0.00	3.18
701	702	3.888323	TGTGTTACCTGTAGTTGACCGTA	59.112	43.478	0.00	0.00	0.00	4.02
702	703	2.694628	TGTGTTACCTGTAGTTGACCGT	59.305	45.455	0.00	0.00	0.00	4.83
703	704	3.243636	ACTGTGTTACCTGTAGTTGACCG	60.244	47.826	0.00	0.00	0.00	4.79
704	705	4.332428	ACTGTGTTACCTGTAGTTGACC	57.668	45.455	0.00	0.00	0.00	4.02
705	706	6.510536	AGTTACTGTGTTACCTGTAGTTGAC	58.489	40.000	0.00	0.00	0.00	3.18
706	707	6.720112	AGTTACTGTGTTACCTGTAGTTGA	57.280	37.500	0.00	0.00	0.00	3.18
707	708	7.655490	ACTAGTTACTGTGTTACCTGTAGTTG	58.345	38.462	0.00	0.00	0.00	3.16
708	709	7.723172	AGACTAGTTACTGTGTTACCTGTAGTT	59.277	37.037	0.00	0.00	0.00	2.24
709	710	7.230027	AGACTAGTTACTGTGTTACCTGTAGT	58.770	38.462	0.00	0.00	0.00	2.73
710	711	7.684937	AGACTAGTTACTGTGTTACCTGTAG	57.315	40.000	0.00	0.00	0.00	2.74
711	712	7.826252	CCTAGACTAGTTACTGTGTTACCTGTA	59.174	40.741	8.68	0.00	0.00	2.74
712	713	6.658391	CCTAGACTAGTTACTGTGTTACCTGT	59.342	42.308	8.68	0.00	0.00	4.00
713	714	6.095160	CCCTAGACTAGTTACTGTGTTACCTG	59.905	46.154	8.68	0.00	0.00	4.00
714	715	6.012157	TCCCTAGACTAGTTACTGTGTTACCT	60.012	42.308	8.68	0.00	0.00	3.08
715	716	6.183347	TCCCTAGACTAGTTACTGTGTTACC	58.817	44.000	8.68	0.00	0.00	2.85
716	717	7.392953	ACTTCCCTAGACTAGTTACTGTGTTAC	59.607	40.741	8.68	0.00	0.00	2.50
717	718	7.392673	CACTTCCCTAGACTAGTTACTGTGTTA	59.607	40.741	8.68	0.00	0.00	2.41
718	719	6.208994	CACTTCCCTAGACTAGTTACTGTGTT	59.791	42.308	8.68	0.00	0.00	3.32
719	720	5.711036	CACTTCCCTAGACTAGTTACTGTGT	59.289	44.000	8.68	0.00	0.00	3.72
720	721	5.125739	CCACTTCCCTAGACTAGTTACTGTG	59.874	48.000	8.68	9.72	0.00	3.66
721	722	5.262804	CCACTTCCCTAGACTAGTTACTGT	58.737	45.833	8.68	0.00	0.00	3.55
722	723	4.645588	CCCACTTCCCTAGACTAGTTACTG	59.354	50.000	8.68	0.00	0.00	2.74
723	724	4.294435	ACCCACTTCCCTAGACTAGTTACT	59.706	45.833	8.68	0.00	0.00	2.24
724	725	4.608269	ACCCACTTCCCTAGACTAGTTAC	58.392	47.826	8.68	0.00	0.00	2.50
725	726	4.325658	GGACCCACTTCCCTAGACTAGTTA	60.326	50.000	8.68	0.00	0.00	2.24
726	727	3.566111	GGACCCACTTCCCTAGACTAGTT	60.566	52.174	8.68	0.00	0.00	2.24
727	728	2.024177	GGACCCACTTCCCTAGACTAGT	60.024	54.545	8.68	0.00	0.00	2.57
728	729	2.668625	GGACCCACTTCCCTAGACTAG	58.331	57.143	2.18	2.18	0.00	2.57
729	730	1.064166	CGGACCCACTTCCCTAGACTA	60.064	57.143	0.00	0.00	31.03	2.59
730	731	0.324460	CGGACCCACTTCCCTAGACT	60.324	60.000	0.00	0.00	31.03	3.24
731	732	0.614134	ACGGACCCACTTCCCTAGAC	60.614	60.000	0.00	0.00	31.03	2.59
732	733	0.324091	GACGGACCCACTTCCCTAGA	60.324	60.000	0.00	0.00	31.03	2.43
733	734	1.328430	GGACGGACCCACTTCCCTAG	61.328	65.000	0.00	0.00	31.03	3.02
734	735	1.305549	GGACGGACCCACTTCCCTA	60.306	63.158	0.00	0.00	31.03	3.53
735	736	2.606826	GGACGGACCCACTTCCCT	60.607	66.667	0.00	0.00	31.03	4.20
754	755	0.617820	AGAGCCAACCGTCACCCTAT	60.618	55.000	0.00	0.00	0.00	2.57
787	790	2.444706	CCTCCCTGATCGCCTCCA	60.445	66.667	0.00	0.00	0.00	3.86
798	801	3.148279	GGACGTGATCGCCTCCCT	61.148	66.667	11.95	0.00	41.18	4.20
799	802	4.570663	CGGACGTGATCGCCTCCC	62.571	72.222	15.89	7.27	41.18	4.30
826	829	1.341852	GATCTCGAAGAACCCTAGCCC	59.658	57.143	0.00	0.00	34.09	5.19
902	913	1.757699	GGAGTATGGTGGACAGGACTC	59.242	57.143	0.00	0.00	41.71	3.36
919	930	4.821589	GGCCACGCGGAGAAGGAG	62.822	72.222	12.47	0.00	0.00	3.69
945	956	3.881089	AGGAAAAGTGTTTTACGACCCTG	59.119	43.478	0.00	0.00	38.52	4.45
946	957	4.160642	AGGAAAAGTGTTTTACGACCCT	57.839	40.909	0.00	0.00	38.52	4.34
978	990	2.243774	CTACCCTCCTGCTCCCTCCA	62.244	65.000	0.00	0.00	0.00	3.86
1020	1042	1.139498	TCAACCCCTTCATCAGCCCA	61.139	55.000	0.00	0.00	0.00	5.36
1215	1237	1.380380	CTGGTTGGCCCCAATCTCC	60.380	63.158	11.31	5.27	37.87	3.71
1268	1290	1.546476	GTCCATCCTCGATCGCCTTAT	59.454	52.381	11.09	0.00	0.00	1.73
1301	1323	2.832129	TCAACCACTACCAGCTCCTTAG	59.168	50.000	0.00	0.00	0.00	2.18
1337	1359	3.197983	AGCGTAGTCTTCTGGCCTTTTAT	59.802	43.478	3.32	0.00	0.00	1.40
1429	1451	3.716872	CCTATGGTGTTCCCTATGTCCTT	59.283	47.826	0.00	0.00	0.00	3.36
1474	1496	3.160269	CAAAAGCTTTCCCATCTGGTCT	58.840	45.455	13.10	0.00	34.77	3.85
1605	1627	2.814269	CCATCACTACTCACCATGTCG	58.186	52.381	0.00	0.00	0.00	4.35
1733	1755	1.426251	TTGGGCTTGCTCTCCCTTCA	61.426	55.000	8.74	0.00	43.04	3.02
1743	1765	0.532115	ATCGACCAAATTGGGCTTGC	59.468	50.000	16.84	0.00	45.79	4.01
1746	1768	2.428171	CAATCATCGACCAAATTGGGCT	59.572	45.455	16.84	0.00	45.79	5.19
1764	1786	0.394565	GGCCTACATCCGCTCTCAAT	59.605	55.000	0.00	0.00	0.00	2.57
1820	3413	1.486726	CGCTTAAACCTCTCCCTCCAT	59.513	52.381	0.00	0.00	0.00	3.41
1853	3446	2.223735	CCGCTCGATCTACTAAAGCCAA	60.224	50.000	0.00	0.00	0.00	4.52
1857	3450	3.139850	TCTCCCGCTCGATCTACTAAAG	58.860	50.000	0.00	0.00	0.00	1.85
1999	3592	6.405397	GGCTCCTTTTTCAACAGTAACAGAAA	60.405	38.462	0.00	0.00	0.00	2.52
2011	3605	1.234615	CCTCGCGGCTCCTTTTTCAA	61.235	55.000	6.13	0.00	0.00	2.69
2051	3645	0.099259	CAGCATGTACCACCATTGCG	59.901	55.000	0.00	0.00	0.00	4.85
2200	3795	5.512576	GCCTTTCTTCCTGTACTTCTTACCA	60.513	44.000	0.00	0.00	0.00	3.25
2254	3849	2.539081	AACCACCCTCTGGCCTTCC	61.539	63.158	3.32	0.00	45.32	3.46
2264	3859	1.599047	CTGAGATCGCAACCACCCT	59.401	57.895	0.00	0.00	0.00	4.34
2432	4027	0.107703	CAGTTTCATAGCTCCCGGCA	60.108	55.000	0.00	0.00	44.79	5.69
2464	4059	2.614013	ATTCCCAAGCCCCCGACT	60.614	61.111	0.00	0.00	0.00	4.18
2466	4061	3.738481	CCATTCCCAAGCCCCCGA	61.738	66.667	0.00	0.00	0.00	5.14
2488	4083	2.659610	GAGGAGGCTGCGAACTGT	59.340	61.111	0.00	0.00	0.00	3.55
2526	4121	1.301423	CCAAAAACAGAACGTCGGGA	58.699	50.000	0.00	0.00	0.00	5.14
2550	4145	2.617308	CTCCTTCACCGATAGCTTCGTA	59.383	50.000	14.33	1.42	46.65	3.43
2566	4161	0.977395	CGGAACCTCTCCAACTCCTT	59.023	55.000	0.00	0.00	45.74	3.36
2611	4206	1.379916	CCACTGGGTTCCATGCAGA	59.620	57.895	4.53	0.00	30.82	4.26
2679	4274	4.039245	TGCCTCCGACCATAAGATCTTAAG	59.961	45.833	18.79	14.25	0.00	1.85
2695	4290	1.820906	CCACATCCACATGCCTCCG	60.821	63.158	0.00	0.00	32.57	4.63
2706	4301	4.039245	TCTTCTTCCGTGATATCCACATCC	59.961	45.833	0.00	0.00	45.98	3.51

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.