Multiple sequence alignment - TraesCS2B01G077700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G077700 chr2B 100.000 3096 0 0 1 3096 43231787 43234882 0.000000e+00 5718.0
1 TraesCS2B01G077700 chr2B 92.121 165 12 1 2895 3058 88767069 88767233 6.680000e-57 231.0
2 TraesCS2B01G077700 chr2B 90.643 171 14 2 2889 3058 638522832 638523001 3.110000e-55 226.0
3 TraesCS2B01G077700 chr2B 92.500 120 9 0 1714 1833 216710519 216710638 4.100000e-39 172.0
4 TraesCS2B01G077700 chr2B 86.207 145 17 3 1720 1862 611283871 611283728 1.490000e-33 154.0
5 TraesCS2B01G077700 chr2D 88.982 1552 72 52 961 2457 27483649 27482142 0.000000e+00 1827.0
6 TraesCS2B01G077700 chr2D 84.000 400 24 14 585 957 27484104 27483718 6.350000e-92 348.0
7 TraesCS2B01G077700 chr2D 84.000 350 35 15 209 541 27484452 27484107 1.790000e-82 316.0
8 TraesCS2B01G077700 chr2D 95.935 123 4 1 2518 2639 27482022 27481900 6.770000e-47 198.0
9 TraesCS2B01G077700 chr2D 85.517 145 18 3 1720 1862 519133962 519133819 6.920000e-32 148.0
10 TraesCS2B01G077700 chr2D 89.744 117 3 5 102 212 27484613 27484500 1.160000e-29 141.0
11 TraesCS2B01G077700 chr2D 89.773 88 5 3 8 95 27484744 27484661 3.260000e-20 110.0
12 TraesCS2B01G077700 chr2D 96.491 57 2 0 2464 2520 27482100 27482044 9.140000e-16 95.3
13 TraesCS2B01G077700 chr2A 96.129 930 34 1 955 1882 29721690 29720761 0.000000e+00 1517.0
14 TraesCS2B01G077700 chr2A 83.957 561 21 28 1892 2401 29720357 29719815 1.000000e-129 473.0
15 TraesCS2B01G077700 chr2A 92.683 164 11 1 2896 3058 120758595 120758432 5.160000e-58 235.0
16 TraesCS2B01G077700 chr2A 75.822 517 70 30 236 725 29722501 29722013 8.700000e-51 211.0
17 TraesCS2B01G077700 chr2A 86.897 145 16 3 1720 1862 663329313 663329170 3.200000e-35 159.0
18 TraesCS2B01G077700 chr2A 83.750 80 5 1 2549 2628 29719520 29719449 5.540000e-08 69.4
19 TraesCS2B01G077700 chr5B 81.545 699 115 11 1163 1853 712397235 712397927 5.800000e-157 564.0
20 TraesCS2B01G077700 chr5B 91.477 176 13 2 2896 3070 291169188 291169362 1.110000e-59 241.0
21 TraesCS2B01G077700 chr5B 92.121 165 12 1 2895 3058 244611969 244612133 6.680000e-57 231.0
22 TraesCS2B01G077700 chr7B 80.316 696 119 14 1163 1848 782777 782090 7.660000e-141 510.0
23 TraesCS2B01G077700 chr5D 79.458 701 132 11 1160 1853 562029045 562029740 1.290000e-133 486.0
24 TraesCS2B01G077700 chr5D 79.912 682 120 15 1160 1830 556273510 556272835 4.640000e-133 484.0
25 TraesCS2B01G077700 chr6A 79.476 687 121 19 1157 1832 51760746 51761423 1.300000e-128 470.0
26 TraesCS2B01G077700 chr6B 79.468 677 120 18 1167 1832 96655207 96654539 2.170000e-126 462.0
27 TraesCS2B01G077700 chr6D 78.801 684 124 20 1162 1832 41207096 41207771 1.020000e-119 440.0
28 TraesCS2B01G077700 chr6D 91.279 172 14 1 2891 3061 470319994 470319823 1.860000e-57 233.0
29 TraesCS2B01G077700 chr1B 92.683 164 11 1 2896 3058 225584775 225584938 5.160000e-58 235.0
30 TraesCS2B01G077700 chr3B 92.121 165 11 2 2895 3058 78846883 78846720 6.680000e-57 231.0
31 TraesCS2B01G077700 chr4B 89.944 179 14 3 2895 3069 345955231 345955409 8.640000e-56 228.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G077700 chr2B 43231787 43234882 3095 False 5718.000000 5718 100.000000 1 3096 1 chr2B.!!$F1 3095
1 TraesCS2B01G077700 chr2D 27481900 27484744 2844 True 433.614286 1827 89.846429 8 2639 7 chr2D.!!$R2 2631
2 TraesCS2B01G077700 chr2A 29719449 29722501 3052 True 567.600000 1517 84.914500 236 2628 4 chr2A.!!$R3 2392
3 TraesCS2B01G077700 chr5B 712397235 712397927 692 False 564.000000 564 81.545000 1163 1853 1 chr5B.!!$F3 690
4 TraesCS2B01G077700 chr7B 782090 782777 687 True 510.000000 510 80.316000 1163 1848 1 chr7B.!!$R1 685
5 TraesCS2B01G077700 chr5D 562029045 562029740 695 False 486.000000 486 79.458000 1160 1853 1 chr5D.!!$F1 693
6 TraesCS2B01G077700 chr5D 556272835 556273510 675 True 484.000000 484 79.912000 1160 1830 1 chr5D.!!$R1 670
7 TraesCS2B01G077700 chr6A 51760746 51761423 677 False 470.000000 470 79.476000 1157 1832 1 chr6A.!!$F1 675
8 TraesCS2B01G077700 chr6B 96654539 96655207 668 True 462.000000 462 79.468000 1167 1832 1 chr6B.!!$R1 665
9 TraesCS2B01G077700 chr6D 41207096 41207771 675 False 440.000000 440 78.801000 1162 1832 1 chr6D.!!$F1 670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
364 479 0.038526 CGATGATGCTACCGGTACCC 60.039 60.0 11.16 5.37 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2153 2879 0.16923 CTGAACGACACGAGGAGGAG 59.831 60.0 0.0 0.0 0.0 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.035102 GCACGCCTCCCCTTCCTT 62.035 66.667 0.00 0.00 0.00 3.36
41 42 4.162690 CGCCTCCCCTTCCTTCCG 62.163 72.222 0.00 0.00 0.00 4.30
43 44 3.032667 GCCTCCCCTTCCTTCCGTC 62.033 68.421 0.00 0.00 0.00 4.79
44 45 2.368011 CCTCCCCTTCCTTCCGTCC 61.368 68.421 0.00 0.00 0.00 4.79
45 46 1.306226 CTCCCCTTCCTTCCGTCCT 60.306 63.158 0.00 0.00 0.00 3.85
46 47 1.305887 TCCCCTTCCTTCCGTCCTC 60.306 63.158 0.00 0.00 0.00 3.71
84 85 3.595108 GAACCTGCGCGGCAAAGTC 62.595 63.158 11.81 0.00 38.41 3.01
85 86 4.927782 ACCTGCGCGGCAAAGTCA 62.928 61.111 11.81 0.00 38.41 3.41
255 354 1.517257 CGATCATATCCGCCCGCTC 60.517 63.158 0.00 0.00 0.00 5.03
280 379 3.441290 CCGGCTCCGACTCGACTT 61.441 66.667 10.28 0.00 42.83 3.01
313 420 2.046988 TCACATGGCCTCGCTGTG 60.047 61.111 17.01 17.01 41.24 3.66
345 460 2.262915 CGTCCCTCTCCTGTGTGC 59.737 66.667 0.00 0.00 0.00 4.57
353 468 0.460811 TCTCCTGTGTGCGATGATGC 60.461 55.000 0.00 0.00 0.00 3.91
364 479 0.038526 CGATGATGCTACCGGTACCC 60.039 60.000 11.16 5.37 0.00 3.69
419 562 2.526873 CGGGATAGGGGAGGTGGG 60.527 72.222 0.00 0.00 0.00 4.61
438 581 1.334779 GGAGAATCATTGCTGCATCGC 60.335 52.381 1.84 0.00 36.25 4.58
442 585 1.233019 ATCATTGCTGCATCGCCTAC 58.767 50.000 1.84 0.00 0.00 3.18
482 629 4.743018 CTTGGAAAGGTGGCCGAT 57.257 55.556 0.00 0.00 41.27 4.18
508 660 2.118683 CGGCCGTGCAATAATTTCATG 58.881 47.619 19.50 0.00 0.00 3.07
513 665 2.531103 CGTGCAATAATTTCATGCGTGG 59.469 45.455 5.98 0.00 42.91 4.94
517 669 4.624882 TGCAATAATTTCATGCGTGGAAAC 59.375 37.500 3.13 0.00 42.91 2.78
519 671 5.004726 GCAATAATTTCATGCGTGGAAACTC 59.995 40.000 3.13 0.00 37.10 3.01
527 679 1.503542 CGTGGAAACTCTGCATGCC 59.496 57.895 16.68 0.00 0.00 4.40
541 693 3.016031 TGCATGCCACGTCATAATTCTT 58.984 40.909 16.68 0.00 0.00 2.52
543 695 4.037690 GCATGCCACGTCATAATTCTTTC 58.962 43.478 6.36 0.00 0.00 2.62
544 696 4.201950 GCATGCCACGTCATAATTCTTTCT 60.202 41.667 6.36 0.00 0.00 2.52
545 697 4.944962 TGCCACGTCATAATTCTTTCTG 57.055 40.909 0.00 0.00 0.00 3.02
546 698 4.323417 TGCCACGTCATAATTCTTTCTGT 58.677 39.130 0.00 0.00 0.00 3.41
547 699 4.154015 TGCCACGTCATAATTCTTTCTGTG 59.846 41.667 0.00 0.00 0.00 3.66
548 700 4.437390 GCCACGTCATAATTCTTTCTGTGG 60.437 45.833 3.30 3.30 45.41 4.17
549 701 4.695455 CCACGTCATAATTCTTTCTGTGGT 59.305 41.667 0.00 0.00 39.51 4.16
550 702 5.872617 CCACGTCATAATTCTTTCTGTGGTA 59.127 40.000 0.00 0.00 39.51 3.25
551 703 6.183360 CCACGTCATAATTCTTTCTGTGGTAC 60.183 42.308 0.00 0.00 39.51 3.34
552 704 5.873164 ACGTCATAATTCTTTCTGTGGTACC 59.127 40.000 4.43 4.43 0.00 3.34
553 705 6.106673 CGTCATAATTCTTTCTGTGGTACCT 58.893 40.000 14.36 0.00 0.00 3.08
554 706 7.093640 ACGTCATAATTCTTTCTGTGGTACCTA 60.094 37.037 14.36 1.11 0.00 3.08
555 707 7.762615 CGTCATAATTCTTTCTGTGGTACCTAA 59.237 37.037 14.36 0.00 0.00 2.69
556 708 9.444600 GTCATAATTCTTTCTGTGGTACCTAAA 57.555 33.333 14.36 7.64 0.00 1.85
557 709 9.667107 TCATAATTCTTTCTGTGGTACCTAAAG 57.333 33.333 14.36 15.93 0.00 1.85
558 710 9.449719 CATAATTCTTTCTGTGGTACCTAAAGT 57.550 33.333 14.36 5.32 0.00 2.66
561 713 7.607615 TTCTTTCTGTGGTACCTAAAGTAGT 57.392 36.000 14.36 0.00 0.00 2.73
562 714 7.607615 TCTTTCTGTGGTACCTAAAGTAGTT 57.392 36.000 14.36 0.00 0.00 2.24
563 715 8.026396 TCTTTCTGTGGTACCTAAAGTAGTTT 57.974 34.615 14.36 0.37 0.00 2.66
564 716 8.488668 TCTTTCTGTGGTACCTAAAGTAGTTTT 58.511 33.333 14.36 0.00 0.00 2.43
565 717 9.117183 CTTTCTGTGGTACCTAAAGTAGTTTTT 57.883 33.333 14.36 0.00 0.00 1.94
567 719 9.546428 TTCTGTGGTACCTAAAGTAGTTTTTAC 57.454 33.333 14.36 0.00 0.00 2.01
568 720 8.927411 TCTGTGGTACCTAAAGTAGTTTTTACT 58.073 33.333 14.36 0.00 0.00 2.24
570 722 9.981114 TGTGGTACCTAAAGTAGTTTTTACTAC 57.019 33.333 14.36 8.99 42.02 2.73
642 815 4.142609 TGTGACCCTTGATTGATAGAGC 57.857 45.455 0.00 0.00 0.00 4.09
665 838 2.976882 AGAGGCGGCATATTAAAGGGTA 59.023 45.455 13.08 0.00 0.00 3.69
666 839 3.393278 AGAGGCGGCATATTAAAGGGTAA 59.607 43.478 13.08 0.00 0.00 2.85
667 840 3.751518 AGGCGGCATATTAAAGGGTAAG 58.248 45.455 13.08 0.00 0.00 2.34
668 841 2.228103 GGCGGCATATTAAAGGGTAAGC 59.772 50.000 3.07 0.00 0.00 3.09
679 852 0.897621 AGGGTAAGCAAGCATTTGGC 59.102 50.000 0.00 0.00 45.30 4.52
702 880 5.427082 CGATAATGACAAGTGCTTCGATTC 58.573 41.667 0.00 0.00 0.00 2.52
725 903 1.079323 AGGCTGGAAACCCCAATGATT 59.921 47.619 0.00 0.00 46.07 2.57
726 904 1.482182 GGCTGGAAACCCCAATGATTC 59.518 52.381 0.00 0.00 46.07 2.52
727 905 2.178580 GCTGGAAACCCCAATGATTCA 58.821 47.619 0.00 0.00 46.07 2.57
760 968 2.832661 ACAACCGCAAAGCCAGCA 60.833 55.556 0.00 0.00 0.00 4.41
761 969 2.202395 ACAACCGCAAAGCCAGCAT 61.202 52.632 0.00 0.00 0.00 3.79
762 970 1.735198 CAACCGCAAAGCCAGCATG 60.735 57.895 0.00 0.00 0.00 4.06
763 971 3.578515 AACCGCAAAGCCAGCATGC 62.579 57.895 10.51 10.51 36.74 4.06
764 972 4.058732 CCGCAAAGCCAGCATGCA 62.059 61.111 21.98 0.00 40.04 3.96
767 975 1.885157 GCAAAGCCAGCATGCACTA 59.115 52.632 21.98 0.00 39.81 2.74
768 976 0.458669 GCAAAGCCAGCATGCACTAT 59.541 50.000 21.98 0.00 39.81 2.12
769 977 1.535437 GCAAAGCCAGCATGCACTATC 60.535 52.381 21.98 3.93 39.81 2.08
770 978 1.019673 AAAGCCAGCATGCACTATCG 58.980 50.000 21.98 0.89 31.97 2.92
771 979 0.816825 AAGCCAGCATGCACTATCGG 60.817 55.000 21.98 10.80 31.97 4.18
773 981 1.097547 GCCAGCATGCACTATCGGTT 61.098 55.000 21.98 0.00 31.97 4.44
774 982 0.940126 CCAGCATGCACTATCGGTTC 59.060 55.000 21.98 0.00 31.97 3.62
775 983 1.655484 CAGCATGCACTATCGGTTCA 58.345 50.000 21.98 0.00 0.00 3.18
776 984 2.216046 CAGCATGCACTATCGGTTCAT 58.784 47.619 21.98 0.00 32.30 2.57
777 985 2.222678 CAGCATGCACTATCGGTTCATC 59.777 50.000 21.98 0.00 29.80 2.92
778 986 2.103771 AGCATGCACTATCGGTTCATCT 59.896 45.455 21.98 0.00 29.80 2.90
779 987 2.478134 GCATGCACTATCGGTTCATCTC 59.522 50.000 14.21 0.00 29.80 2.75
780 988 3.721035 CATGCACTATCGGTTCATCTCA 58.279 45.455 0.00 0.00 29.80 3.27
781 989 4.313282 CATGCACTATCGGTTCATCTCAT 58.687 43.478 0.00 0.00 29.80 2.90
783 991 4.122046 TGCACTATCGGTTCATCTCATTG 58.878 43.478 0.00 0.00 0.00 2.82
789 1001 1.065491 CGGTTCATCTCATTGTCCCCA 60.065 52.381 0.00 0.00 0.00 4.96
805 1017 2.091885 TCCCCAGACCAAAGCATATTCC 60.092 50.000 0.00 0.00 0.00 3.01
806 1018 2.091665 CCCCAGACCAAAGCATATTCCT 60.092 50.000 0.00 0.00 0.00 3.36
812 1024 5.359009 CAGACCAAAGCATATTCCTGAACAT 59.641 40.000 0.00 0.00 0.00 2.71
854 1067 7.538678 GCATCACTAAACCAGTTCACAATAAAG 59.461 37.037 0.00 0.00 34.26 1.85
866 1079 6.258068 AGTTCACAATAAAGTAGCTTATCCGC 59.742 38.462 0.00 0.00 0.00 5.54
872 1085 0.587285 AGTAGCTTATCCGCGACTCG 59.413 55.000 8.23 0.00 41.08 4.18
957 1178 2.355837 GCACGGCTGTCTCGACAA 60.356 61.111 0.00 0.00 41.33 3.18
968 1254 1.200020 GTCTCGACAATGGCCTTTTGG 59.800 52.381 19.09 5.75 44.18 3.28
969 1255 1.202879 TCTCGACAATGGCCTTTTGGT 60.203 47.619 19.09 8.56 42.99 3.67
1011 1297 0.727398 AGCTCGCTCAATAAAACCGC 59.273 50.000 0.00 0.00 0.00 5.68
1012 1298 0.586502 GCTCGCTCAATAAAACCGCG 60.587 55.000 0.00 0.00 44.63 6.46
1038 1329 2.262915 GCCCTGTCCTCACACTCG 59.737 66.667 0.00 0.00 0.00 4.18
1062 1359 3.175710 ACACTCCACCACCCCCAC 61.176 66.667 0.00 0.00 0.00 4.61
1077 1374 0.178981 CCCACCCATCCATCCATCAC 60.179 60.000 0.00 0.00 0.00 3.06
1882 2187 5.045213 TGAAGCTTCTTCCTCTCTCTCTCTA 60.045 44.000 26.09 0.00 0.00 2.43
1883 2188 4.781934 AGCTTCTTCCTCTCTCTCTCTAC 58.218 47.826 0.00 0.00 0.00 2.59
1887 2192 3.714798 TCTTCCTCTCTCTCTCTACCTCC 59.285 52.174 0.00 0.00 0.00 4.30
1889 2194 1.071699 CCTCTCTCTCTCTACCTCCCG 59.928 61.905 0.00 0.00 0.00 5.14
1890 2195 0.470766 TCTCTCTCTCTACCTCCCGC 59.529 60.000 0.00 0.00 0.00 6.13
1920 2619 6.498651 TCCATCTGTTTTCTTCTTCTACCTCT 59.501 38.462 0.00 0.00 0.00 3.69
1922 2621 7.118971 CCATCTGTTTTCTTCTTCTACCTCTTG 59.881 40.741 0.00 0.00 0.00 3.02
1923 2622 5.992217 TCTGTTTTCTTCTTCTACCTCTTGC 59.008 40.000 0.00 0.00 0.00 4.01
1924 2623 5.680619 TGTTTTCTTCTTCTACCTCTTGCA 58.319 37.500 0.00 0.00 0.00 4.08
1925 2624 6.119536 TGTTTTCTTCTTCTACCTCTTGCAA 58.880 36.000 0.00 0.00 0.00 4.08
1948 2648 3.059352 TGCAAGAAGAAGCTAACCTCC 57.941 47.619 0.00 0.00 0.00 4.30
1949 2649 2.290323 TGCAAGAAGAAGCTAACCTCCC 60.290 50.000 0.00 0.00 0.00 4.30
1952 2652 3.922171 AGAAGAAGCTAACCTCCCATG 57.078 47.619 0.00 0.00 0.00 3.66
1953 2653 2.092699 AGAAGAAGCTAACCTCCCATGC 60.093 50.000 0.00 0.00 0.00 4.06
1959 2659 1.616994 GCTAACCTCCCATGCCTTTGT 60.617 52.381 0.00 0.00 0.00 2.83
2146 2872 0.108615 AGCTAGCGTGTTGGCAGTAG 60.109 55.000 9.55 0.00 34.64 2.57
2167 2893 1.226802 CATGCTCCTCCTCGTGTCG 60.227 63.158 0.00 0.00 0.00 4.35
2168 2894 1.679305 ATGCTCCTCCTCGTGTCGT 60.679 57.895 0.00 0.00 0.00 4.34
2217 2958 2.304180 AGTGAGAGAAAGACCACCATGG 59.696 50.000 11.19 11.19 45.02 3.66
2218 2959 2.303022 GTGAGAGAAAGACCACCATGGA 59.697 50.000 21.47 0.00 40.96 3.41
2220 2961 3.198635 TGAGAGAAAGACCACCATGGATC 59.801 47.826 21.47 12.79 40.96 3.36
2221 2962 2.169352 AGAGAAAGACCACCATGGATCG 59.831 50.000 21.47 7.35 40.96 3.69
2222 2963 1.017387 GAAAGACCACCATGGATCGC 58.983 55.000 21.47 5.00 40.96 4.58
2224 2965 0.107508 AAGACCACCATGGATCGCTG 60.108 55.000 21.47 5.41 40.96 5.18
2225 2966 1.221840 GACCACCATGGATCGCTGT 59.778 57.895 21.47 5.53 40.96 4.40
2227 2968 0.038166 ACCACCATGGATCGCTGTTT 59.962 50.000 21.47 0.00 40.96 2.83
2228 2969 1.176527 CCACCATGGATCGCTGTTTT 58.823 50.000 21.47 0.00 40.96 2.43
2230 2971 1.811965 CACCATGGATCGCTGTTTTCA 59.188 47.619 21.47 0.00 0.00 2.69
2232 2973 2.086869 CCATGGATCGCTGTTTTCACT 58.913 47.619 5.56 0.00 0.00 3.41
2234 2975 3.495193 CATGGATCGCTGTTTTCACTTG 58.505 45.455 0.00 0.00 0.00 3.16
2273 3018 3.058501 CCTTGTCACCGTTAATGTTGTCC 60.059 47.826 0.00 0.00 0.00 4.02
2316 3067 3.129287 GTGTTGGTGTTGGATGGATGATC 59.871 47.826 0.00 0.00 0.00 2.92
2317 3068 2.330440 TGGTGTTGGATGGATGATCG 57.670 50.000 0.00 0.00 30.87 3.69
2319 3070 2.238395 TGGTGTTGGATGGATGATCGAA 59.762 45.455 0.00 0.00 30.87 3.71
2321 3072 2.614057 GTGTTGGATGGATGATCGAACC 59.386 50.000 0.00 0.00 44.89 3.62
2322 3073 2.505407 TGTTGGATGGATGATCGAACCT 59.495 45.455 5.44 0.00 44.89 3.50
2323 3074 2.874701 GTTGGATGGATGATCGAACCTG 59.125 50.000 5.44 0.00 41.57 4.00
2433 3252 4.690748 GTGTATAGCTTGTCTTTGTCTGCA 59.309 41.667 0.00 0.00 0.00 4.41
2457 3276 8.086522 GCAATGCAATCATGTTTATCTATCCTT 58.913 33.333 0.00 0.00 32.23 3.36
2458 3277 9.406828 CAATGCAATCATGTTTATCTATCCTTG 57.593 33.333 0.00 0.00 32.23 3.61
2459 3278 8.701908 ATGCAATCATGTTTATCTATCCTTGT 57.298 30.769 0.00 0.00 0.00 3.16
2460 3279 8.158169 TGCAATCATGTTTATCTATCCTTGTC 57.842 34.615 0.00 0.00 0.00 3.18
2461 3280 7.774625 TGCAATCATGTTTATCTATCCTTGTCA 59.225 33.333 0.00 0.00 0.00 3.58
2462 3281 8.288208 GCAATCATGTTTATCTATCCTTGTCAG 58.712 37.037 0.00 0.00 0.00 3.51
2463 3282 9.334947 CAATCATGTTTATCTATCCTTGTCAGT 57.665 33.333 0.00 0.00 0.00 3.41
2464 3283 8.899427 ATCATGTTTATCTATCCTTGTCAGTG 57.101 34.615 0.00 0.00 0.00 3.66
2471 3290 0.326264 ATCCTTGTCAGTGGAGTGCC 59.674 55.000 0.00 0.00 35.63 5.01
2543 3469 2.108514 ATGCATGCTCCGTGGTTCG 61.109 57.895 20.33 0.00 39.52 3.95
2629 3555 0.391130 GCTCACGCTTATCCACACCA 60.391 55.000 0.00 0.00 0.00 4.17
2630 3556 1.743772 GCTCACGCTTATCCACACCAT 60.744 52.381 0.00 0.00 0.00 3.55
2631 3557 2.483013 GCTCACGCTTATCCACACCATA 60.483 50.000 0.00 0.00 0.00 2.74
2632 3558 3.803715 GCTCACGCTTATCCACACCATAT 60.804 47.826 0.00 0.00 0.00 1.78
2633 3559 3.990092 TCACGCTTATCCACACCATATC 58.010 45.455 0.00 0.00 0.00 1.63
2635 3561 2.288825 ACGCTTATCCACACCATATCCG 60.289 50.000 0.00 0.00 0.00 4.18
2636 3562 2.076863 GCTTATCCACACCATATCCGC 58.923 52.381 0.00 0.00 0.00 5.54
2638 3564 0.606096 TATCCACACCATATCCGCCG 59.394 55.000 0.00 0.00 0.00 6.46
2640 3566 2.972505 CACACCATATCCGCCGGC 60.973 66.667 19.07 19.07 0.00 6.13
2641 3567 3.161450 ACACCATATCCGCCGGCT 61.161 61.111 26.68 8.66 0.00 5.52
2642 3568 2.357517 CACCATATCCGCCGGCTC 60.358 66.667 26.68 0.00 0.00 4.70
2643 3569 3.991051 ACCATATCCGCCGGCTCG 61.991 66.667 26.68 14.79 0.00 5.03
2644 3570 3.991051 CCATATCCGCCGGCTCGT 61.991 66.667 26.68 12.22 0.00 4.18
2645 3571 2.430921 CATATCCGCCGGCTCGTC 60.431 66.667 26.68 0.00 0.00 4.20
2646 3572 4.039357 ATATCCGCCGGCTCGTCG 62.039 66.667 26.68 8.25 0.00 5.12
2651 3577 4.554363 CGCCGGCTCGTCGATCTT 62.554 66.667 26.68 0.00 0.00 2.40
2652 3578 2.956964 GCCGGCTCGTCGATCTTG 60.957 66.667 22.15 0.00 0.00 3.02
2653 3579 2.278857 CCGGCTCGTCGATCTTGG 60.279 66.667 0.00 0.00 0.00 3.61
2654 3580 2.956964 CGGCTCGTCGATCTTGGC 60.957 66.667 0.00 0.00 0.00 4.52
2655 3581 2.956964 GGCTCGTCGATCTTGGCG 60.957 66.667 0.00 0.00 0.00 5.69
2656 3582 2.102357 GCTCGTCGATCTTGGCGA 59.898 61.111 0.00 0.00 35.08 5.54
2657 3583 4.293694 CTCGTCGATCTTGGCGAG 57.706 61.111 9.68 9.68 43.42 5.03
2658 3584 1.941734 CTCGTCGATCTTGGCGAGC 60.942 63.158 10.91 0.00 43.02 5.03
2659 3585 2.103143 CGTCGATCTTGGCGAGCT 59.897 61.111 0.00 0.00 38.59 4.09
2660 3586 1.517257 CGTCGATCTTGGCGAGCTT 60.517 57.895 0.00 0.00 38.59 3.74
2661 3587 1.475441 CGTCGATCTTGGCGAGCTTC 61.475 60.000 0.00 0.00 38.59 3.86
2662 3588 0.179124 GTCGATCTTGGCGAGCTTCT 60.179 55.000 0.00 0.00 38.59 2.85
2663 3589 0.179127 TCGATCTTGGCGAGCTTCTG 60.179 55.000 0.00 0.00 33.33 3.02
2664 3590 0.459237 CGATCTTGGCGAGCTTCTGT 60.459 55.000 0.00 0.00 0.00 3.41
2665 3591 1.285578 GATCTTGGCGAGCTTCTGTC 58.714 55.000 0.00 0.00 0.00 3.51
2666 3592 0.459237 ATCTTGGCGAGCTTCTGTCG 60.459 55.000 0.00 0.00 40.50 4.35
2667 3593 1.080501 CTTGGCGAGCTTCTGTCGA 60.081 57.895 0.00 0.00 39.92 4.20
2668 3594 1.347817 CTTGGCGAGCTTCTGTCGAC 61.348 60.000 9.11 9.11 46.20 4.20
2669 3595 2.876645 GGCGAGCTTCTGTCGACG 60.877 66.667 11.62 6.07 39.92 5.12
2670 3596 3.537297 GCGAGCTTCTGTCGACGC 61.537 66.667 11.62 8.09 39.92 5.19
2671 3597 3.234041 CGAGCTTCTGTCGACGCG 61.234 66.667 11.62 3.53 39.22 6.01
2672 3598 2.876645 GAGCTTCTGTCGACGCGG 60.877 66.667 12.47 3.89 39.22 6.46
2729 3655 4.143333 CGCCAGGTCCGGATCGTT 62.143 66.667 7.81 0.00 0.00 3.85
2730 3656 2.511600 GCCAGGTCCGGATCGTTG 60.512 66.667 7.81 1.33 0.00 4.10
2731 3657 2.978824 CCAGGTCCGGATCGTTGT 59.021 61.111 7.81 0.00 0.00 3.32
2732 3658 1.447838 CCAGGTCCGGATCGTTGTG 60.448 63.158 7.81 0.00 0.00 3.33
2733 3659 1.447838 CAGGTCCGGATCGTTGTGG 60.448 63.158 7.81 0.00 0.00 4.17
2734 3660 1.608336 AGGTCCGGATCGTTGTGGA 60.608 57.895 7.81 0.00 0.00 4.02
2735 3661 4.180496 GTCCGGATCGTTGTGGAC 57.820 61.111 7.81 4.45 43.60 4.02
2736 3662 1.447314 GTCCGGATCGTTGTGGACC 60.447 63.158 7.81 0.00 44.06 4.46
2737 3663 2.125269 CCGGATCGTTGTGGACCC 60.125 66.667 0.00 0.00 0.00 4.46
2738 3664 2.660206 CGGATCGTTGTGGACCCA 59.340 61.111 0.00 0.00 0.00 4.51
2739 3665 1.447838 CGGATCGTTGTGGACCCAG 60.448 63.158 0.00 0.00 0.00 4.45
2740 3666 1.884075 CGGATCGTTGTGGACCCAGA 61.884 60.000 0.00 0.00 0.00 3.86
2741 3667 0.391263 GGATCGTTGTGGACCCAGAC 60.391 60.000 0.00 0.00 0.00 3.51
2742 3668 0.391263 GATCGTTGTGGACCCAGACC 60.391 60.000 0.00 0.00 0.00 3.85
2743 3669 2.167398 ATCGTTGTGGACCCAGACCG 62.167 60.000 0.00 0.00 0.00 4.79
2744 3670 2.032071 GTTGTGGACCCAGACCGG 59.968 66.667 0.00 0.00 0.00 5.28
2745 3671 3.948719 TTGTGGACCCAGACCGGC 61.949 66.667 0.00 0.00 0.00 6.13
2786 3712 4.012895 CGTTGCTTTGGCGTCGCT 62.013 61.111 18.11 0.00 42.25 4.93
2787 3713 2.127232 GTTGCTTTGGCGTCGCTC 60.127 61.111 18.11 7.95 42.25 5.03
2788 3714 2.280797 TTGCTTTGGCGTCGCTCT 60.281 55.556 18.11 0.00 42.25 4.09
2789 3715 1.891919 TTGCTTTGGCGTCGCTCTT 60.892 52.632 18.11 0.00 42.25 2.85
2790 3716 2.116736 TTGCTTTGGCGTCGCTCTTG 62.117 55.000 18.11 6.81 42.25 3.02
2791 3717 2.174349 CTTTGGCGTCGCTCTTGC 59.826 61.111 18.11 0.00 0.00 4.01
2818 3744 3.710722 CTGCCTCGCCACCCTCTT 61.711 66.667 0.00 0.00 0.00 2.85
2819 3745 3.672295 CTGCCTCGCCACCCTCTTC 62.672 68.421 0.00 0.00 0.00 2.87
2820 3746 3.394836 GCCTCGCCACCCTCTTCT 61.395 66.667 0.00 0.00 0.00 2.85
2821 3747 2.896443 CCTCGCCACCCTCTTCTC 59.104 66.667 0.00 0.00 0.00 2.87
2822 3748 2.492090 CTCGCCACCCTCTTCTCG 59.508 66.667 0.00 0.00 0.00 4.04
2823 3749 3.068691 TCGCCACCCTCTTCTCGG 61.069 66.667 0.00 0.00 0.00 4.63
2824 3750 3.382832 CGCCACCCTCTTCTCGGT 61.383 66.667 0.00 0.00 0.00 4.69
2825 3751 2.579738 GCCACCCTCTTCTCGGTC 59.420 66.667 0.00 0.00 0.00 4.79
2826 3752 2.885861 CCACCCTCTTCTCGGTCG 59.114 66.667 0.00 0.00 0.00 4.79
2827 3753 1.677966 CCACCCTCTTCTCGGTCGA 60.678 63.158 0.00 0.00 0.00 4.20
2828 3754 1.507174 CACCCTCTTCTCGGTCGAC 59.493 63.158 7.13 7.13 0.00 4.20
2829 3755 1.074423 ACCCTCTTCTCGGTCGACA 59.926 57.895 18.91 0.00 0.00 4.35
2830 3756 1.242665 ACCCTCTTCTCGGTCGACAC 61.243 60.000 18.91 5.92 0.00 3.67
2831 3757 1.134901 CCTCTTCTCGGTCGACACG 59.865 63.158 18.91 17.80 0.00 4.49
2832 3758 1.296755 CCTCTTCTCGGTCGACACGA 61.297 60.000 22.03 22.03 38.79 4.35
2833 3759 0.727970 CTCTTCTCGGTCGACACGAT 59.272 55.000 23.11 0.00 39.89 3.73
2834 3760 0.446616 TCTTCTCGGTCGACACGATG 59.553 55.000 23.11 17.92 39.89 3.84
2835 3761 1.134530 CTTCTCGGTCGACACGATGC 61.135 60.000 23.11 3.78 39.89 3.91
2836 3762 2.537792 TTCTCGGTCGACACGATGCC 62.538 60.000 23.11 3.11 39.89 4.40
2837 3763 3.336715 CTCGGTCGACACGATGCCA 62.337 63.158 23.11 6.97 39.89 4.92
2838 3764 3.179265 CGGTCGACACGATGCCAC 61.179 66.667 18.91 0.00 38.42 5.01
2839 3765 2.813908 GGTCGACACGATGCCACC 60.814 66.667 18.91 0.00 38.42 4.61
2840 3766 2.048597 GTCGACACGATGCCACCA 60.049 61.111 11.55 0.00 38.42 4.17
2841 3767 2.048597 TCGACACGATGCCACCAC 60.049 61.111 0.00 0.00 0.00 4.16
2842 3768 3.478394 CGACACGATGCCACCACG 61.478 66.667 0.00 0.00 0.00 4.94
2843 3769 3.118454 GACACGATGCCACCACGG 61.118 66.667 0.00 0.00 38.11 4.94
2859 3785 3.277133 GGCCACCGACGTACTGTA 58.723 61.111 0.00 0.00 0.00 2.74
2860 3786 1.138247 GGCCACCGACGTACTGTAG 59.862 63.158 0.00 0.00 0.00 2.74
2862 3788 1.308069 GCCACCGACGTACTGTAGGA 61.308 60.000 18.44 0.00 45.51 2.94
2863 3789 1.386533 CCACCGACGTACTGTAGGAT 58.613 55.000 18.44 0.00 45.51 3.24
2864 3790 1.065102 CCACCGACGTACTGTAGGATG 59.935 57.143 18.44 13.54 45.51 3.51
2865 3791 0.737219 ACCGACGTACTGTAGGATGC 59.263 55.000 18.44 3.03 45.51 3.91
2866 3792 0.316772 CCGACGTACTGTAGGATGCG 60.317 60.000 13.87 12.62 45.51 4.73
2867 3793 0.316772 CGACGTACTGTAGGATGCGG 60.317 60.000 13.87 0.00 0.00 5.69
2868 3794 0.594284 GACGTACTGTAGGATGCGGC 60.594 60.000 13.87 0.00 0.00 6.53
2869 3795 1.317431 ACGTACTGTAGGATGCGGCA 61.317 55.000 13.87 4.58 0.00 5.69
2870 3796 0.595053 CGTACTGTAGGATGCGGCAG 60.595 60.000 9.25 8.90 35.31 4.85
2871 3797 0.876342 GTACTGTAGGATGCGGCAGC 60.876 60.000 10.24 10.24 45.41 5.25
2889 3815 1.927210 CGTTCCTTCGCCATCATCG 59.073 57.895 0.00 0.00 0.00 3.84
2890 3816 1.490693 CGTTCCTTCGCCATCATCGG 61.491 60.000 0.00 0.00 0.00 4.18
2897 3823 2.969238 GCCATCATCGGCGACCAG 60.969 66.667 13.76 5.50 43.52 4.00
2898 3824 2.280389 CCATCATCGGCGACCAGG 60.280 66.667 13.76 8.52 0.00 4.45
2899 3825 2.280389 CATCATCGGCGACCAGGG 60.280 66.667 13.76 0.00 0.00 4.45
2900 3826 3.550431 ATCATCGGCGACCAGGGG 61.550 66.667 13.76 0.00 0.00 4.79
2920 3846 2.821991 CGGAGCTAGGGGTATTTCTG 57.178 55.000 0.00 0.00 0.00 3.02
2921 3847 1.344763 CGGAGCTAGGGGTATTTCTGG 59.655 57.143 0.00 0.00 0.00 3.86
2922 3848 1.700186 GGAGCTAGGGGTATTTCTGGG 59.300 57.143 0.00 0.00 0.00 4.45
2923 3849 2.409570 GAGCTAGGGGTATTTCTGGGT 58.590 52.381 0.00 0.00 0.00 4.51
2924 3850 2.369203 GAGCTAGGGGTATTTCTGGGTC 59.631 54.545 0.00 0.00 33.33 4.46
2925 3851 2.021936 AGCTAGGGGTATTTCTGGGTCT 60.022 50.000 0.00 0.00 0.00 3.85
2926 3852 2.778270 GCTAGGGGTATTTCTGGGTCTT 59.222 50.000 0.00 0.00 0.00 3.01
2927 3853 3.433740 GCTAGGGGTATTTCTGGGTCTTG 60.434 52.174 0.00 0.00 0.00 3.02
2928 3854 2.929301 AGGGGTATTTCTGGGTCTTGA 58.071 47.619 0.00 0.00 0.00 3.02
2929 3855 2.576648 AGGGGTATTTCTGGGTCTTGAC 59.423 50.000 0.00 0.00 0.00 3.18
2930 3856 2.629051 GGGTATTTCTGGGTCTTGACG 58.371 52.381 0.00 0.00 0.00 4.35
2931 3857 2.027469 GGGTATTTCTGGGTCTTGACGT 60.027 50.000 0.00 0.00 0.00 4.34
2932 3858 3.000727 GGTATTTCTGGGTCTTGACGTG 58.999 50.000 0.00 0.00 0.00 4.49
2933 3859 3.306502 GGTATTTCTGGGTCTTGACGTGA 60.307 47.826 0.00 0.00 0.00 4.35
2934 3860 2.992124 TTTCTGGGTCTTGACGTGAA 57.008 45.000 0.00 0.00 0.00 3.18
2935 3861 3.485463 TTTCTGGGTCTTGACGTGAAT 57.515 42.857 0.00 0.00 0.00 2.57
2936 3862 4.610605 TTTCTGGGTCTTGACGTGAATA 57.389 40.909 0.00 0.00 0.00 1.75
2937 3863 3.587797 TCTGGGTCTTGACGTGAATAC 57.412 47.619 0.00 0.00 0.00 1.89
2938 3864 2.232941 TCTGGGTCTTGACGTGAATACC 59.767 50.000 12.87 12.87 0.00 2.73
2939 3865 1.276989 TGGGTCTTGACGTGAATACCC 59.723 52.381 27.31 27.31 40.91 3.69
2940 3866 1.276989 GGGTCTTGACGTGAATACCCA 59.723 52.381 28.48 1.72 40.45 4.51
2941 3867 2.093128 GGGTCTTGACGTGAATACCCAT 60.093 50.000 28.48 0.00 40.45 4.00
2942 3868 3.133362 GGGTCTTGACGTGAATACCCATA 59.867 47.826 28.48 0.00 40.45 2.74
2943 3869 4.383335 GGGTCTTGACGTGAATACCCATAA 60.383 45.833 28.48 0.00 40.45 1.90
2944 3870 5.365619 GGTCTTGACGTGAATACCCATAAT 58.634 41.667 10.59 0.00 0.00 1.28
2945 3871 5.820947 GGTCTTGACGTGAATACCCATAATT 59.179 40.000 10.59 0.00 0.00 1.40
2946 3872 6.317893 GGTCTTGACGTGAATACCCATAATTT 59.682 38.462 10.59 0.00 0.00 1.82
2947 3873 7.148137 GGTCTTGACGTGAATACCCATAATTTT 60.148 37.037 10.59 0.00 0.00 1.82
2948 3874 8.241367 GTCTTGACGTGAATACCCATAATTTTT 58.759 33.333 0.00 0.00 0.00 1.94
2949 3875 9.451002 TCTTGACGTGAATACCCATAATTTTTA 57.549 29.630 0.00 0.00 0.00 1.52
2950 3876 9.498307 CTTGACGTGAATACCCATAATTTTTAC 57.502 33.333 0.00 0.00 0.00 2.01
2951 3877 8.563123 TGACGTGAATACCCATAATTTTTACA 57.437 30.769 0.00 0.00 0.00 2.41
2952 3878 9.011095 TGACGTGAATACCCATAATTTTTACAA 57.989 29.630 0.00 0.00 0.00 2.41
2953 3879 9.843334 GACGTGAATACCCATAATTTTTACAAA 57.157 29.630 0.00 0.00 0.00 2.83
2954 3880 9.628746 ACGTGAATACCCATAATTTTTACAAAC 57.371 29.630 0.00 0.00 0.00 2.93
2955 3881 9.627395 CGTGAATACCCATAATTTTTACAAACA 57.373 29.630 0.00 0.00 0.00 2.83
2961 3887 8.655651 ACCCATAATTTTTACAAACAGTGTTG 57.344 30.769 9.79 6.59 41.98 3.33
2962 3888 8.478877 ACCCATAATTTTTACAAACAGTGTTGA 58.521 29.630 9.79 0.00 41.98 3.18
2963 3889 9.487790 CCCATAATTTTTACAAACAGTGTTGAT 57.512 29.630 9.79 3.36 41.98 2.57
2969 3895 6.654793 TTTACAAACAGTGTTGATTTTGGC 57.345 33.333 9.79 0.00 41.98 4.52
2970 3896 4.199432 ACAAACAGTGTTGATTTTGGCA 57.801 36.364 9.79 0.00 37.01 4.92
2971 3897 4.573900 ACAAACAGTGTTGATTTTGGCAA 58.426 34.783 9.79 0.00 37.01 4.52
2972 3898 4.999950 ACAAACAGTGTTGATTTTGGCAAA 59.000 33.333 9.79 8.93 37.01 3.68
2973 3899 5.471456 ACAAACAGTGTTGATTTTGGCAAAA 59.529 32.000 25.94 25.94 37.01 2.44
2974 3900 5.799681 AACAGTGTTGATTTTGGCAAAAG 57.200 34.783 27.21 15.04 33.22 2.27
2975 3901 5.083533 ACAGTGTTGATTTTGGCAAAAGA 57.916 34.783 27.21 15.47 33.22 2.52
2976 3902 5.111293 ACAGTGTTGATTTTGGCAAAAGAG 58.889 37.500 27.21 13.90 33.22 2.85
2977 3903 5.111293 CAGTGTTGATTTTGGCAAAAGAGT 58.889 37.500 27.21 13.48 33.22 3.24
2978 3904 5.005971 CAGTGTTGATTTTGGCAAAAGAGTG 59.994 40.000 27.21 13.91 33.22 3.51
2979 3905 5.105392 AGTGTTGATTTTGGCAAAAGAGTGA 60.105 36.000 27.21 10.98 33.22 3.41
2980 3906 5.005682 GTGTTGATTTTGGCAAAAGAGTGAC 59.994 40.000 27.21 20.00 33.22 3.67
2981 3907 4.998671 TGATTTTGGCAAAAGAGTGACA 57.001 36.364 27.21 17.01 33.59 3.58
2982 3908 5.336150 TGATTTTGGCAAAAGAGTGACAA 57.664 34.783 27.21 4.71 44.91 3.18
2983 3909 5.916318 TGATTTTGGCAAAAGAGTGACAAT 58.084 33.333 27.21 10.02 45.85 2.71
2984 3910 6.347696 TGATTTTGGCAAAAGAGTGACAATT 58.652 32.000 27.21 9.33 45.85 2.32
2985 3911 6.822676 TGATTTTGGCAAAAGAGTGACAATTT 59.177 30.769 27.21 8.84 45.85 1.82
2986 3912 7.336427 TGATTTTGGCAAAAGAGTGACAATTTT 59.664 29.630 27.21 8.65 45.85 1.82
2987 3913 7.446001 TTTTGGCAAAAGAGTGACAATTTTT 57.554 28.000 20.81 0.00 45.85 1.94
2988 3914 6.419980 TTGGCAAAAGAGTGACAATTTTTG 57.580 33.333 0.00 13.82 41.69 2.44
2989 3915 5.728471 TGGCAAAAGAGTGACAATTTTTGA 58.272 33.333 18.60 5.04 40.94 2.69
2990 3916 6.169094 TGGCAAAAGAGTGACAATTTTTGAA 58.831 32.000 18.60 9.24 40.94 2.69
2991 3917 6.652481 TGGCAAAAGAGTGACAATTTTTGAAA 59.348 30.769 18.60 9.02 40.94 2.69
2992 3918 7.173907 TGGCAAAAGAGTGACAATTTTTGAAAA 59.826 29.630 18.60 0.00 40.94 2.29
2993 3919 8.020244 GGCAAAAGAGTGACAATTTTTGAAAAA 58.980 29.630 18.60 5.47 40.94 1.94
2994 3920 8.839914 GCAAAAGAGTGACAATTTTTGAAAAAC 58.160 29.630 18.60 0.00 40.94 2.43
2995 3921 9.875675 CAAAAGAGTGACAATTTTTGAAAAACA 57.124 25.926 5.08 0.00 40.94 2.83
2997 3923 7.294676 AGAGTGACAATTTTTGAAAAACAGC 57.705 32.000 5.08 0.00 0.00 4.40
2998 3924 6.873076 AGAGTGACAATTTTTGAAAAACAGCA 59.127 30.769 5.08 0.00 0.00 4.41
2999 3925 7.387397 AGAGTGACAATTTTTGAAAAACAGCAA 59.613 29.630 5.08 0.00 0.00 3.91
3000 3926 8.042944 AGTGACAATTTTTGAAAAACAGCAAT 57.957 26.923 5.08 0.00 0.00 3.56
3001 3927 7.964011 AGTGACAATTTTTGAAAAACAGCAATG 59.036 29.630 5.08 1.93 0.00 2.82
3002 3928 7.961827 GTGACAATTTTTGAAAAACAGCAATGA 59.038 29.630 5.08 0.00 0.00 2.57
3003 3929 8.675504 TGACAATTTTTGAAAAACAGCAATGAT 58.324 25.926 5.08 0.00 0.00 2.45
3004 3930 9.505995 GACAATTTTTGAAAAACAGCAATGATT 57.494 25.926 5.08 0.00 0.00 2.57
3005 3931 9.857957 ACAATTTTTGAAAAACAGCAATGATTT 57.142 22.222 5.08 0.00 0.00 2.17
3008 3934 8.684973 TTTTTGAAAAACAGCAATGATTTTGG 57.315 26.923 0.00 0.00 0.00 3.28
3009 3935 6.998968 TTGAAAAACAGCAATGATTTTGGT 57.001 29.167 1.63 0.00 0.00 3.67
3010 3936 8.498054 TTTGAAAAACAGCAATGATTTTGGTA 57.502 26.923 1.63 0.00 0.00 3.25
3011 3937 8.498054 TTGAAAAACAGCAATGATTTTGGTAA 57.502 26.923 1.63 0.00 0.00 2.85
3012 3938 8.498054 TGAAAAACAGCAATGATTTTGGTAAA 57.502 26.923 1.63 0.00 0.00 2.01
3013 3939 8.950210 TGAAAAACAGCAATGATTTTGGTAAAA 58.050 25.926 1.63 0.00 34.41 1.52
3014 3940 9.949174 GAAAAACAGCAATGATTTTGGTAAAAT 57.051 25.926 1.63 0.00 43.43 1.82
3015 3941 9.733219 AAAAACAGCAATGATTTTGGTAAAATG 57.267 25.926 4.42 0.00 40.97 2.32
3016 3942 8.674263 AAACAGCAATGATTTTGGTAAAATGA 57.326 26.923 4.42 0.00 40.97 2.57
3017 3943 8.674263 AACAGCAATGATTTTGGTAAAATGAA 57.326 26.923 4.42 0.00 40.97 2.57
3018 3944 8.851541 ACAGCAATGATTTTGGTAAAATGAAT 57.148 26.923 4.42 0.00 40.97 2.57
3019 3945 9.941325 ACAGCAATGATTTTGGTAAAATGAATA 57.059 25.926 4.42 0.00 40.97 1.75
3021 3947 9.941325 AGCAATGATTTTGGTAAAATGAATACA 57.059 25.926 4.42 0.00 40.97 2.29
3022 3948 9.971744 GCAATGATTTTGGTAAAATGAATACAC 57.028 29.630 4.42 0.00 40.97 2.90
3033 3959 9.887406 GGTAAAATGAATACACATAAATACCCG 57.113 33.333 0.00 0.00 32.73 5.28
3038 3964 7.197071 TGAATACACATAAATACCCGATTGC 57.803 36.000 0.00 0.00 0.00 3.56
3039 3965 6.768381 TGAATACACATAAATACCCGATTGCA 59.232 34.615 0.00 0.00 0.00 4.08
3040 3966 7.283354 TGAATACACATAAATACCCGATTGCAA 59.717 33.333 0.00 0.00 0.00 4.08
3041 3967 5.906113 ACACATAAATACCCGATTGCAAA 57.094 34.783 1.71 0.00 0.00 3.68
3042 3968 6.463995 ACACATAAATACCCGATTGCAAAT 57.536 33.333 1.71 0.00 0.00 2.32
3043 3969 6.872920 ACACATAAATACCCGATTGCAAATT 58.127 32.000 1.71 0.00 0.00 1.82
3044 3970 6.978080 ACACATAAATACCCGATTGCAAATTC 59.022 34.615 1.71 0.00 0.00 2.17
3045 3971 6.420604 CACATAAATACCCGATTGCAAATTCC 59.579 38.462 1.71 0.00 0.00 3.01
3046 3972 6.323739 ACATAAATACCCGATTGCAAATTCCT 59.676 34.615 1.71 0.00 0.00 3.36
3047 3973 4.654091 AATACCCGATTGCAAATTCCTG 57.346 40.909 1.71 0.00 0.00 3.86
3048 3974 1.185315 ACCCGATTGCAAATTCCTGG 58.815 50.000 1.71 2.59 0.00 4.45
3049 3975 1.272425 ACCCGATTGCAAATTCCTGGA 60.272 47.619 1.71 0.00 0.00 3.86
3050 3976 1.406539 CCCGATTGCAAATTCCTGGAG 59.593 52.381 1.71 0.00 0.00 3.86
3051 3977 1.202336 CCGATTGCAAATTCCTGGAGC 60.202 52.381 1.71 0.00 0.00 4.70
3052 3978 1.202336 CGATTGCAAATTCCTGGAGCC 60.202 52.381 1.71 0.00 0.00 4.70
3053 3979 0.819582 ATTGCAAATTCCTGGAGCCG 59.180 50.000 1.71 0.00 0.00 5.52
3054 3980 1.876497 TTGCAAATTCCTGGAGCCGC 61.876 55.000 0.00 0.00 0.00 6.53
3055 3981 3.068729 GCAAATTCCTGGAGCCGCC 62.069 63.158 0.00 0.00 37.10 6.13
3056 3982 1.678635 CAAATTCCTGGAGCCGCCA 60.679 57.895 0.00 0.00 46.96 5.69
3057 3983 1.678970 AAATTCCTGGAGCCGCCAC 60.679 57.895 0.00 0.00 43.33 5.01
3058 3984 3.645268 AATTCCTGGAGCCGCCACC 62.645 63.158 0.00 0.00 43.33 4.61
3071 3997 4.619227 CCACCGTCGGCAACACCT 62.619 66.667 12.28 0.00 35.61 4.00
3072 3998 3.041940 CACCGTCGGCAACACCTC 61.042 66.667 12.28 0.00 35.61 3.85
3073 3999 4.309950 ACCGTCGGCAACACCTCC 62.310 66.667 12.28 0.00 35.61 4.30
3074 4000 4.003788 CCGTCGGCAACACCTCCT 62.004 66.667 0.00 0.00 35.61 3.69
3075 4001 2.432628 CGTCGGCAACACCTCCTC 60.433 66.667 0.00 0.00 35.61 3.71
3076 4002 2.047179 GTCGGCAACACCTCCTCC 60.047 66.667 0.00 0.00 35.61 4.30
3077 4003 2.203788 TCGGCAACACCTCCTCCT 60.204 61.111 0.00 0.00 35.61 3.69
3078 4004 1.841556 TCGGCAACACCTCCTCCTT 60.842 57.895 0.00 0.00 35.61 3.36
3079 4005 1.672356 CGGCAACACCTCCTCCTTG 60.672 63.158 0.00 0.00 35.61 3.61
3080 4006 1.761174 GGCAACACCTCCTCCTTGA 59.239 57.895 0.00 0.00 34.51 3.02
3081 4007 0.606673 GGCAACACCTCCTCCTTGAC 60.607 60.000 0.00 0.00 34.51 3.18
3082 4008 0.951040 GCAACACCTCCTCCTTGACG 60.951 60.000 0.00 0.00 0.00 4.35
3083 4009 0.679505 CAACACCTCCTCCTTGACGA 59.320 55.000 0.00 0.00 0.00 4.20
3084 4010 1.070134 CAACACCTCCTCCTTGACGAA 59.930 52.381 0.00 0.00 0.00 3.85
3085 4011 1.420430 ACACCTCCTCCTTGACGAAA 58.580 50.000 0.00 0.00 0.00 3.46
3086 4012 1.978580 ACACCTCCTCCTTGACGAAAT 59.021 47.619 0.00 0.00 0.00 2.17
3087 4013 2.372172 ACACCTCCTCCTTGACGAAATT 59.628 45.455 0.00 0.00 0.00 1.82
3088 4014 2.744202 CACCTCCTCCTTGACGAAATTG 59.256 50.000 0.00 0.00 0.00 2.32
3089 4015 1.740025 CCTCCTCCTTGACGAAATTGC 59.260 52.381 0.00 0.00 0.00 3.56
3090 4016 1.740025 CTCCTCCTTGACGAAATTGCC 59.260 52.381 0.00 0.00 0.00 4.52
3091 4017 1.073125 TCCTCCTTGACGAAATTGCCA 59.927 47.619 0.00 0.00 0.00 4.92
3092 4018 2.094675 CCTCCTTGACGAAATTGCCAT 58.905 47.619 0.00 0.00 0.00 4.40
3093 4019 2.159338 CCTCCTTGACGAAATTGCCATG 60.159 50.000 0.00 0.00 0.00 3.66
3094 4020 1.202114 TCCTTGACGAAATTGCCATGC 59.798 47.619 0.00 0.00 0.00 4.06
3095 4021 1.632422 CTTGACGAAATTGCCATGCC 58.368 50.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.896168 CACGGCGGAGGATAAAAAGTA 58.104 47.619 13.24 0.00 0.00 2.24
2 3 1.734163 CACGGCGGAGGATAAAAAGT 58.266 50.000 13.24 0.00 0.00 2.66
6 7 1.448893 GTGCACGGCGGAGGATAAA 60.449 57.895 13.24 0.00 0.00 1.40
30 31 2.368011 GGGAGGACGGAAGGAAGGG 61.368 68.421 0.00 0.00 0.00 3.95
77 78 6.142320 CGGTGAAAACTTTTATCTGACTTTGC 59.858 38.462 0.00 0.00 0.00 3.68
84 85 3.669557 CGGCCGGTGAAAACTTTTATCTG 60.670 47.826 20.10 0.00 0.00 2.90
85 86 2.486592 CGGCCGGTGAAAACTTTTATCT 59.513 45.455 20.10 0.00 0.00 1.98
328 435 2.262915 GCACACAGGAGAGGGACG 59.737 66.667 0.00 0.00 0.00 4.79
332 439 0.463204 ATCATCGCACACAGGAGAGG 59.537 55.000 0.00 0.00 0.00 3.69
334 441 0.460811 GCATCATCGCACACAGGAGA 60.461 55.000 0.00 0.00 0.00 3.71
345 460 0.038526 GGGTACCGGTAGCATCATCG 60.039 60.000 36.94 0.00 40.86 3.84
364 479 2.158943 GGATTCCTTCTTCCGGTAGGTG 60.159 54.545 8.37 1.66 39.05 4.00
419 562 1.334779 GGCGATGCAGCAATGATTCTC 60.335 52.381 1.53 0.00 39.27 2.87
438 581 1.108776 TGCAACTAGGGCTACGTAGG 58.891 55.000 23.47 9.25 38.94 3.18
482 629 2.610532 TTATTGCACGGCCGGCCATA 62.611 55.000 42.78 29.00 35.37 2.74
487 634 0.453793 TGAAATTATTGCACGGCCGG 59.546 50.000 31.76 19.49 0.00 6.13
488 635 2.118683 CATGAAATTATTGCACGGCCG 58.881 47.619 26.86 26.86 0.00 6.13
489 636 1.860326 GCATGAAATTATTGCACGGCC 59.140 47.619 0.00 0.00 36.40 6.13
490 637 1.518102 CGCATGAAATTATTGCACGGC 59.482 47.619 0.00 2.36 36.15 5.68
491 638 2.531103 CACGCATGAAATTATTGCACGG 59.469 45.455 0.00 0.00 36.15 4.94
508 660 1.154150 GCATGCAGAGTTTCCACGC 60.154 57.895 14.21 0.00 0.00 5.34
513 665 0.166814 GACGTGGCATGCAGAGTTTC 59.833 55.000 21.36 3.81 0.00 2.78
517 669 1.655484 TTATGACGTGGCATGCAGAG 58.345 50.000 21.36 11.82 0.00 3.35
519 671 2.615447 AGAATTATGACGTGGCATGCAG 59.385 45.455 21.36 12.58 0.00 4.41
527 679 5.862924 ACCACAGAAAGAATTATGACGTG 57.137 39.130 0.00 0.00 32.14 4.49
541 693 9.546428 GTAAAAACTACTTTAGGTACCACAGAA 57.454 33.333 15.94 0.00 0.00 3.02
544 696 9.981114 GTAGTAAAAACTACTTTAGGTACCACA 57.019 33.333 15.94 0.00 39.44 4.17
602 754 7.416326 GGGTCACAAACAAGTCTTAATGAACTT 60.416 37.037 0.00 0.00 0.00 2.66
610 762 5.105567 TCAAGGGTCACAAACAAGTCTTA 57.894 39.130 0.00 0.00 0.00 2.10
642 815 2.069273 CCTTTAATATGCCGCCTCTCG 58.931 52.381 0.00 0.00 38.08 4.04
665 838 3.130869 TCATTATCGCCAAATGCTTGCTT 59.869 39.130 0.00 0.00 38.05 3.91
666 839 2.689471 TCATTATCGCCAAATGCTTGCT 59.311 40.909 0.00 0.00 38.05 3.91
667 840 2.791004 GTCATTATCGCCAAATGCTTGC 59.209 45.455 0.00 0.00 38.05 4.01
668 841 4.031418 TGTCATTATCGCCAAATGCTTG 57.969 40.909 0.00 0.00 38.05 4.01
679 852 5.233050 AGAATCGAAGCACTTGTCATTATCG 59.767 40.000 0.00 0.00 0.00 2.92
691 864 1.936547 CCAGCCTTAGAATCGAAGCAC 59.063 52.381 0.00 0.00 0.00 4.40
725 903 4.995058 GGGAGGGTGGGTGGGTGA 62.995 72.222 0.00 0.00 0.00 4.02
761 969 4.122046 CAATGAGATGAACCGATAGTGCA 58.878 43.478 0.00 0.00 38.85 4.57
762 970 4.122776 ACAATGAGATGAACCGATAGTGC 58.877 43.478 0.00 0.00 0.00 4.40
763 971 4.747108 GGACAATGAGATGAACCGATAGTG 59.253 45.833 0.00 0.00 0.00 2.74
764 972 4.202264 GGGACAATGAGATGAACCGATAGT 60.202 45.833 0.00 0.00 0.00 2.12
767 975 2.158755 GGGGACAATGAGATGAACCGAT 60.159 50.000 0.00 0.00 0.00 4.18
768 976 1.209504 GGGGACAATGAGATGAACCGA 59.790 52.381 0.00 0.00 0.00 4.69
769 977 1.065491 TGGGGACAATGAGATGAACCG 60.065 52.381 0.00 0.00 37.44 4.44
770 978 2.239654 TCTGGGGACAATGAGATGAACC 59.760 50.000 0.00 0.00 42.06 3.62
771 979 3.274288 GTCTGGGGACAATGAGATGAAC 58.726 50.000 0.00 0.00 42.06 3.18
773 981 1.839994 GGTCTGGGGACAATGAGATGA 59.160 52.381 0.00 0.00 43.77 2.92
774 982 1.561076 TGGTCTGGGGACAATGAGATG 59.439 52.381 0.00 0.00 43.77 2.90
775 983 1.971149 TGGTCTGGGGACAATGAGAT 58.029 50.000 0.00 0.00 43.77 2.75
776 984 1.741028 TTGGTCTGGGGACAATGAGA 58.259 50.000 0.00 0.00 43.77 3.27
777 985 2.440409 CTTTGGTCTGGGGACAATGAG 58.560 52.381 0.00 0.00 43.77 2.90
778 986 1.547675 GCTTTGGTCTGGGGACAATGA 60.548 52.381 0.00 0.00 43.77 2.57
779 987 0.890683 GCTTTGGTCTGGGGACAATG 59.109 55.000 0.00 0.00 43.77 2.82
780 988 0.482446 TGCTTTGGTCTGGGGACAAT 59.518 50.000 0.00 0.00 43.77 2.71
781 989 0.482446 ATGCTTTGGTCTGGGGACAA 59.518 50.000 0.00 0.00 43.77 3.18
783 991 2.736670 ATATGCTTTGGTCTGGGGAC 57.263 50.000 0.00 0.00 41.43 4.46
789 1001 4.922206 TGTTCAGGAATATGCTTTGGTCT 58.078 39.130 0.00 0.00 0.00 3.85
822 1034 7.826744 TGTGAACTGGTTTAGTGATGCATTATA 59.173 33.333 0.00 0.00 40.26 0.98
823 1035 6.658816 TGTGAACTGGTTTAGTGATGCATTAT 59.341 34.615 0.00 0.00 40.26 1.28
825 1037 4.826733 TGTGAACTGGTTTAGTGATGCATT 59.173 37.500 0.00 0.00 40.26 3.56
826 1038 4.397420 TGTGAACTGGTTTAGTGATGCAT 58.603 39.130 0.00 0.00 40.26 3.96
827 1039 3.814625 TGTGAACTGGTTTAGTGATGCA 58.185 40.909 0.00 0.00 40.26 3.96
828 1040 4.829064 TTGTGAACTGGTTTAGTGATGC 57.171 40.909 0.00 0.00 40.26 3.91
829 1041 8.567948 ACTTTATTGTGAACTGGTTTAGTGATG 58.432 33.333 0.00 0.00 40.26 3.07
839 1051 7.254455 CGGATAAGCTACTTTATTGTGAACTGG 60.254 40.741 0.00 0.00 0.00 4.00
854 1067 0.997726 GCGAGTCGCGGATAAGCTAC 60.998 60.000 23.39 0.00 44.55 3.58
866 1079 2.438868 TGGATGGATAATGCGAGTCG 57.561 50.000 8.54 8.54 0.00 4.18
872 1085 9.757227 GTCTACTATAGAATGGATGGATAATGC 57.243 37.037 6.78 0.00 36.40 3.56
957 1178 4.415596 TGTCTTCAATACCAAAAGGCCAT 58.584 39.130 5.01 0.00 0.00 4.40
968 1254 1.348594 GCGGCGCTGTCTTCAATAC 59.651 57.895 26.86 0.00 0.00 1.89
969 1255 1.079474 TGCGGCGCTGTCTTCAATA 60.079 52.632 33.26 5.11 0.00 1.90
1011 1297 4.767255 GACAGGGCAGGACAGGCG 62.767 72.222 0.00 0.00 34.40 5.52
1012 1298 4.416738 GGACAGGGCAGGACAGGC 62.417 72.222 0.00 0.00 0.00 4.85
1022 1313 2.219325 GAGCGAGTGTGAGGACAGGG 62.219 65.000 0.00 0.00 30.74 4.45
1038 1329 0.674895 GGTGGTGGAGTGTGATGAGC 60.675 60.000 0.00 0.00 0.00 4.26
1062 1359 2.440627 TCTTCTGTGATGGATGGATGGG 59.559 50.000 0.00 0.00 0.00 4.00
1077 1374 3.623060 CGTTCTCCTCTCTCTCTCTTCTG 59.377 52.174 0.00 0.00 0.00 3.02
1109 1408 4.998798 TTGGCCATGGCTGCTGCA 62.999 61.111 34.70 21.44 41.91 4.41
1817 2122 3.617531 CGGCCTTCTTGTTGTAGATGACT 60.618 47.826 0.00 0.00 0.00 3.41
1859 2164 4.273318 AGAGAGAGAGAGGAAGAAGCTTC 58.727 47.826 19.11 19.11 0.00 3.86
1882 2187 4.779733 ATGGAGACGGCGGGAGGT 62.780 66.667 13.24 0.00 0.00 3.85
1883 2188 3.917760 GATGGAGACGGCGGGAGG 61.918 72.222 13.24 0.00 0.00 4.30
1887 2192 0.673644 AAAACAGATGGAGACGGCGG 60.674 55.000 13.24 0.00 0.00 6.13
1889 2194 2.100605 AGAAAACAGATGGAGACGGC 57.899 50.000 0.00 0.00 0.00 5.68
1890 2195 3.931578 AGAAGAAAACAGATGGAGACGG 58.068 45.455 0.00 0.00 0.00 4.79
1922 2621 2.789491 AGCTTCTTCTTGCAAGTTGC 57.211 45.000 25.19 21.17 45.29 4.17
1923 2622 4.276926 AGGTTAGCTTCTTCTTGCAAGTTG 59.723 41.667 25.19 18.18 0.00 3.16
1924 2623 4.464947 AGGTTAGCTTCTTCTTGCAAGTT 58.535 39.130 25.19 0.66 0.00 2.66
1925 2624 4.068599 GAGGTTAGCTTCTTCTTGCAAGT 58.931 43.478 25.19 7.49 0.00 3.16
1948 2648 2.198827 TCCACTGTACAAAGGCATGG 57.801 50.000 8.10 4.55 0.00 3.66
1949 2649 3.614092 AGATCCACTGTACAAAGGCATG 58.386 45.455 8.10 0.00 0.00 4.06
1952 2652 3.686726 CAGAAGATCCACTGTACAAAGGC 59.313 47.826 8.10 0.00 0.00 4.35
1953 2653 4.256920 CCAGAAGATCCACTGTACAAAGG 58.743 47.826 13.29 6.87 32.93 3.11
1959 2659 2.100197 CGACCCAGAAGATCCACTGTA 58.900 52.381 13.29 0.00 32.93 2.74
2146 2872 1.812922 CACGAGGAGGAGCATGCAC 60.813 63.158 21.98 14.31 0.00 4.57
2150 2876 1.251527 AACGACACGAGGAGGAGCAT 61.252 55.000 0.00 0.00 0.00 3.79
2151 2877 1.863662 GAACGACACGAGGAGGAGCA 61.864 60.000 0.00 0.00 0.00 4.26
2152 2878 1.153997 GAACGACACGAGGAGGAGC 60.154 63.158 0.00 0.00 0.00 4.70
2153 2879 0.169230 CTGAACGACACGAGGAGGAG 59.831 60.000 0.00 0.00 0.00 3.69
2154 2880 0.536687 ACTGAACGACACGAGGAGGA 60.537 55.000 0.00 0.00 0.00 3.71
2155 2881 0.387367 CACTGAACGACACGAGGAGG 60.387 60.000 0.00 0.00 0.00 4.30
2156 2882 0.311165 ACACTGAACGACACGAGGAG 59.689 55.000 0.00 0.00 0.00 3.69
2167 2893 1.069204 TGCACAGAGAGGACACTGAAC 59.931 52.381 0.00 0.00 37.95 3.18
2168 2894 1.413118 TGCACAGAGAGGACACTGAA 58.587 50.000 0.00 0.00 37.95 3.02
2217 2958 2.481952 AGAGCAAGTGAAAACAGCGATC 59.518 45.455 0.00 0.00 0.00 3.69
2218 2959 2.498167 AGAGCAAGTGAAAACAGCGAT 58.502 42.857 0.00 0.00 0.00 4.58
2220 2961 2.032054 TGAAGAGCAAGTGAAAACAGCG 59.968 45.455 0.00 0.00 0.00 5.18
2221 2962 3.698029 TGAAGAGCAAGTGAAAACAGC 57.302 42.857 0.00 0.00 0.00 4.40
2222 2963 8.807667 AATAATTGAAGAGCAAGTGAAAACAG 57.192 30.769 0.00 0.00 40.42 3.16
2224 2965 9.899226 AGTAATAATTGAAGAGCAAGTGAAAAC 57.101 29.630 0.00 0.00 40.42 2.43
2227 2968 8.103305 AGGAGTAATAATTGAAGAGCAAGTGAA 58.897 33.333 0.00 0.00 40.42 3.18
2228 2969 7.624549 AGGAGTAATAATTGAAGAGCAAGTGA 58.375 34.615 0.00 0.00 40.42 3.41
2230 2971 7.885399 ACAAGGAGTAATAATTGAAGAGCAAGT 59.115 33.333 0.00 0.00 40.42 3.16
2232 2973 7.882791 TGACAAGGAGTAATAATTGAAGAGCAA 59.117 33.333 0.00 0.00 41.53 3.91
2234 2975 7.201652 GGTGACAAGGAGTAATAATTGAAGAGC 60.202 40.741 0.00 0.00 0.00 4.09
2316 3067 1.070175 CAGCGGTTTTACACAGGTTCG 60.070 52.381 0.00 0.00 0.00 3.95
2317 3068 1.944709 ACAGCGGTTTTACACAGGTTC 59.055 47.619 0.00 0.00 0.00 3.62
2319 3070 1.134340 TCACAGCGGTTTTACACAGGT 60.134 47.619 0.00 0.00 0.00 4.00
2321 3072 2.032894 CACTCACAGCGGTTTTACACAG 60.033 50.000 0.00 0.00 0.00 3.66
2322 3073 1.937223 CACTCACAGCGGTTTTACACA 59.063 47.619 0.00 0.00 0.00 3.72
2323 3074 2.206750 TCACTCACAGCGGTTTTACAC 58.793 47.619 0.00 0.00 0.00 2.90
2433 3252 9.139734 ACAAGGATAGATAAACATGATTGCATT 57.860 29.630 0.00 0.00 30.68 3.56
2464 3283 2.827921 AGAAAACAATCATGGGCACTCC 59.172 45.455 0.00 0.00 0.00 3.85
2471 3290 5.664294 TCAATCCCAGAAAACAATCATGG 57.336 39.130 0.00 0.00 0.00 3.66
2540 3466 3.823281 TCAACCACCTTCAGTTACGAA 57.177 42.857 0.00 0.00 0.00 3.85
2543 3469 4.134563 ACACATCAACCACCTTCAGTTAC 58.865 43.478 0.00 0.00 0.00 2.50
2635 3561 2.956964 CAAGATCGACGAGCCGGC 60.957 66.667 21.89 21.89 0.00 6.13
2636 3562 2.278857 CCAAGATCGACGAGCCGG 60.279 66.667 9.90 7.14 0.00 6.13
2638 3564 2.956964 CGCCAAGATCGACGAGCC 60.957 66.667 9.90 0.46 0.00 4.70
2640 3566 4.293694 CTCGCCAAGATCGACGAG 57.706 61.111 3.01 12.81 45.02 4.18
2641 3567 1.934220 AAGCTCGCCAAGATCGACGA 61.934 55.000 0.00 0.00 32.08 4.20
2642 3568 1.475441 GAAGCTCGCCAAGATCGACG 61.475 60.000 0.00 0.00 32.08 5.12
2643 3569 0.179124 AGAAGCTCGCCAAGATCGAC 60.179 55.000 0.00 0.00 32.08 4.20
2644 3570 0.179127 CAGAAGCTCGCCAAGATCGA 60.179 55.000 0.00 0.00 34.52 3.59
2645 3571 0.459237 ACAGAAGCTCGCCAAGATCG 60.459 55.000 0.00 0.00 0.00 3.69
2646 3572 1.285578 GACAGAAGCTCGCCAAGATC 58.714 55.000 0.00 0.00 0.00 2.75
2647 3573 0.459237 CGACAGAAGCTCGCCAAGAT 60.459 55.000 0.00 0.00 0.00 2.40
2648 3574 1.080501 CGACAGAAGCTCGCCAAGA 60.081 57.895 0.00 0.00 0.00 3.02
2649 3575 1.080501 TCGACAGAAGCTCGCCAAG 60.081 57.895 0.00 0.00 0.00 3.61
2650 3576 1.372997 GTCGACAGAAGCTCGCCAA 60.373 57.895 11.55 0.00 0.00 4.52
2651 3577 2.258591 GTCGACAGAAGCTCGCCA 59.741 61.111 11.55 0.00 0.00 5.69
2652 3578 2.876645 CGTCGACAGAAGCTCGCC 60.877 66.667 17.16 0.00 0.00 5.54
2653 3579 3.537297 GCGTCGACAGAAGCTCGC 61.537 66.667 17.16 6.70 46.09 5.03
2709 3635 3.917760 GATCCGGACCTGGCGGAG 61.918 72.222 18.19 0.00 35.12 4.63
2712 3638 4.143333 AACGATCCGGACCTGGCG 62.143 66.667 6.12 8.66 0.00 5.69
2713 3639 2.511600 CAACGATCCGGACCTGGC 60.512 66.667 6.12 0.00 0.00 4.85
2714 3640 1.447838 CACAACGATCCGGACCTGG 60.448 63.158 6.12 0.00 0.00 4.45
2715 3641 1.447838 CCACAACGATCCGGACCTG 60.448 63.158 6.12 4.15 0.00 4.00
2716 3642 1.608336 TCCACAACGATCCGGACCT 60.608 57.895 6.12 0.00 0.00 3.85
2717 3643 1.447314 GTCCACAACGATCCGGACC 60.447 63.158 6.12 0.00 41.77 4.46
2718 3644 1.447314 GGTCCACAACGATCCGGAC 60.447 63.158 6.12 0.00 45.95 4.79
2719 3645 2.652095 GGGTCCACAACGATCCGGA 61.652 63.158 6.61 6.61 0.00 5.14
2720 3646 2.125269 GGGTCCACAACGATCCGG 60.125 66.667 0.00 0.00 0.00 5.14
2721 3647 1.447838 CTGGGTCCACAACGATCCG 60.448 63.158 0.00 0.00 35.60 4.18
2722 3648 0.391263 GTCTGGGTCCACAACGATCC 60.391 60.000 0.00 0.00 33.19 3.36
2723 3649 0.391263 GGTCTGGGTCCACAACGATC 60.391 60.000 0.00 0.00 0.00 3.69
2724 3650 1.677552 GGTCTGGGTCCACAACGAT 59.322 57.895 0.00 0.00 0.00 3.73
2725 3651 2.863346 CGGTCTGGGTCCACAACGA 61.863 63.158 0.00 0.00 0.00 3.85
2726 3652 2.357034 CGGTCTGGGTCCACAACG 60.357 66.667 0.00 0.00 0.00 4.10
2727 3653 2.032071 CCGGTCTGGGTCCACAAC 59.968 66.667 0.00 0.00 0.00 3.32
2728 3654 3.948719 GCCGGTCTGGGTCCACAA 61.949 66.667 1.90 0.00 38.63 3.33
2769 3695 3.911155 GAGCGACGCCAAAGCAACG 62.911 63.158 17.79 0.00 39.83 4.10
2770 3696 2.117941 AAGAGCGACGCCAAAGCAAC 62.118 55.000 17.79 0.00 39.83 4.17
2771 3697 1.891919 AAGAGCGACGCCAAAGCAA 60.892 52.632 17.79 0.00 39.83 3.91
2772 3698 2.280797 AAGAGCGACGCCAAAGCA 60.281 55.556 17.79 0.00 39.83 3.91
2773 3699 2.174349 CAAGAGCGACGCCAAAGC 59.826 61.111 17.79 1.07 0.00 3.51
2774 3700 2.174349 GCAAGAGCGACGCCAAAG 59.826 61.111 17.79 5.89 0.00 2.77
2775 3701 3.353836 GGCAAGAGCGACGCCAAA 61.354 61.111 17.79 0.00 45.52 3.28
2801 3727 3.672295 GAAGAGGGTGGCGAGGCAG 62.672 68.421 0.00 0.00 0.00 4.85
2802 3728 3.706373 GAAGAGGGTGGCGAGGCA 61.706 66.667 0.00 0.00 0.00 4.75
2803 3729 3.378399 GAGAAGAGGGTGGCGAGGC 62.378 68.421 0.00 0.00 0.00 4.70
2804 3730 2.896443 GAGAAGAGGGTGGCGAGG 59.104 66.667 0.00 0.00 0.00 4.63
2805 3731 2.492090 CGAGAAGAGGGTGGCGAG 59.508 66.667 0.00 0.00 0.00 5.03
2806 3732 3.068691 CCGAGAAGAGGGTGGCGA 61.069 66.667 0.00 0.00 0.00 5.54
2807 3733 3.358076 GACCGAGAAGAGGGTGGCG 62.358 68.421 0.00 0.00 36.46 5.69
2808 3734 2.579738 GACCGAGAAGAGGGTGGC 59.420 66.667 0.00 0.00 36.46 5.01
2809 3735 1.677966 TCGACCGAGAAGAGGGTGG 60.678 63.158 0.00 0.00 36.46 4.61
2810 3736 1.241990 TGTCGACCGAGAAGAGGGTG 61.242 60.000 14.12 0.00 36.46 4.61
2811 3737 1.074423 TGTCGACCGAGAAGAGGGT 59.926 57.895 14.12 0.00 39.83 4.34
2812 3738 1.507174 GTGTCGACCGAGAAGAGGG 59.493 63.158 14.12 0.00 0.00 4.30
2813 3739 1.134901 CGTGTCGACCGAGAAGAGG 59.865 63.158 14.12 0.00 0.00 3.69
2814 3740 0.727970 ATCGTGTCGACCGAGAAGAG 59.272 55.000 25.54 6.39 39.18 2.85
2815 3741 0.446616 CATCGTGTCGACCGAGAAGA 59.553 55.000 25.54 11.97 39.18 2.87
2816 3742 1.134530 GCATCGTGTCGACCGAGAAG 61.135 60.000 25.54 19.98 39.18 2.85
2817 3743 1.154093 GCATCGTGTCGACCGAGAA 60.154 57.895 25.54 10.54 39.18 2.87
2818 3744 2.483745 GCATCGTGTCGACCGAGA 59.516 61.111 25.54 17.35 39.18 4.04
2819 3745 2.579787 GGCATCGTGTCGACCGAG 60.580 66.667 25.54 19.72 39.18 4.63
2820 3746 3.366915 TGGCATCGTGTCGACCGA 61.367 61.111 24.41 24.41 39.18 4.69
2821 3747 3.179265 GTGGCATCGTGTCGACCG 61.179 66.667 14.12 15.86 39.18 4.79
2822 3748 2.813908 GGTGGCATCGTGTCGACC 60.814 66.667 14.12 3.43 39.18 4.79
2823 3749 2.048597 TGGTGGCATCGTGTCGAC 60.049 61.111 9.11 9.11 39.18 4.20
2824 3750 2.048597 GTGGTGGCATCGTGTCGA 60.049 61.111 0.00 0.00 41.13 4.20
2825 3751 3.478394 CGTGGTGGCATCGTGTCG 61.478 66.667 0.00 0.00 0.00 4.35
2826 3752 3.118454 CCGTGGTGGCATCGTGTC 61.118 66.667 0.00 0.00 0.00 3.67
2842 3768 1.138247 CTACAGTACGTCGGTGGCC 59.862 63.158 0.00 0.00 0.00 5.36
2843 3769 1.138247 CCTACAGTACGTCGGTGGC 59.862 63.158 0.00 0.00 0.00 5.01
2844 3770 1.065102 CATCCTACAGTACGTCGGTGG 59.935 57.143 0.00 0.00 32.21 4.61
2845 3771 1.533338 GCATCCTACAGTACGTCGGTG 60.533 57.143 0.00 0.00 32.21 4.94
2846 3772 0.737219 GCATCCTACAGTACGTCGGT 59.263 55.000 0.00 0.00 32.21 4.69
2847 3773 0.316772 CGCATCCTACAGTACGTCGG 60.317 60.000 0.00 3.18 0.00 4.79
2848 3774 0.316772 CCGCATCCTACAGTACGTCG 60.317 60.000 0.00 0.00 0.00 5.12
2849 3775 0.594284 GCCGCATCCTACAGTACGTC 60.594 60.000 0.00 0.00 0.00 4.34
2850 3776 1.317431 TGCCGCATCCTACAGTACGT 61.317 55.000 0.00 0.00 0.00 3.57
2851 3777 0.595053 CTGCCGCATCCTACAGTACG 60.595 60.000 0.00 0.00 0.00 3.67
2852 3778 0.876342 GCTGCCGCATCCTACAGTAC 60.876 60.000 0.00 0.00 35.78 2.73
2853 3779 1.441729 GCTGCCGCATCCTACAGTA 59.558 57.895 0.00 0.00 35.78 2.74
2854 3780 2.187946 GCTGCCGCATCCTACAGT 59.812 61.111 0.00 0.00 35.78 3.55
2855 3781 2.963854 CGCTGCCGCATCCTACAG 60.964 66.667 0.00 0.00 35.30 2.74
2856 3782 3.309436 AACGCTGCCGCATCCTACA 62.309 57.895 0.00 0.00 38.22 2.74
2857 3783 2.511600 AACGCTGCCGCATCCTAC 60.512 61.111 0.00 0.00 38.22 3.18
2858 3784 2.202878 GAACGCTGCCGCATCCTA 60.203 61.111 0.00 0.00 38.22 2.94
2861 3787 3.100862 GAAGGAACGCTGCCGCATC 62.101 63.158 0.00 0.00 38.22 3.91
2862 3788 3.127533 GAAGGAACGCTGCCGCAT 61.128 61.111 0.00 0.00 38.22 4.73
2871 3797 1.490693 CCGATGATGGCGAAGGAACG 61.491 60.000 0.00 0.00 0.00 3.95
2872 3798 1.776034 GCCGATGATGGCGAAGGAAC 61.776 60.000 0.00 0.00 46.75 3.62
2873 3799 1.523711 GCCGATGATGGCGAAGGAA 60.524 57.895 0.00 0.00 46.75 3.36
2874 3800 2.108976 GCCGATGATGGCGAAGGA 59.891 61.111 0.00 0.00 46.75 3.36
2881 3807 2.280389 CCTGGTCGCCGATGATGG 60.280 66.667 0.00 0.00 0.00 3.51
2882 3808 2.280389 CCCTGGTCGCCGATGATG 60.280 66.667 0.00 0.00 0.00 3.07
2883 3809 3.550431 CCCCTGGTCGCCGATGAT 61.550 66.667 0.00 0.00 0.00 2.45
2892 3818 3.541713 CTAGCTCCGCCCCTGGTC 61.542 72.222 0.00 0.00 0.00 4.02
2897 3823 3.848252 ATACCCCTAGCTCCGCCCC 62.848 68.421 0.00 0.00 0.00 5.80
2898 3824 1.416480 AAATACCCCTAGCTCCGCCC 61.416 60.000 0.00 0.00 0.00 6.13
2899 3825 0.035036 GAAATACCCCTAGCTCCGCC 59.965 60.000 0.00 0.00 0.00 6.13
2900 3826 1.049402 AGAAATACCCCTAGCTCCGC 58.951 55.000 0.00 0.00 0.00 5.54
2901 3827 1.344763 CCAGAAATACCCCTAGCTCCG 59.655 57.143 0.00 0.00 0.00 4.63
2902 3828 1.700186 CCCAGAAATACCCCTAGCTCC 59.300 57.143 0.00 0.00 0.00 4.70
2903 3829 2.369203 GACCCAGAAATACCCCTAGCTC 59.631 54.545 0.00 0.00 0.00 4.09
2904 3830 2.021936 AGACCCAGAAATACCCCTAGCT 60.022 50.000 0.00 0.00 0.00 3.32
2905 3831 2.409570 AGACCCAGAAATACCCCTAGC 58.590 52.381 0.00 0.00 0.00 3.42
2906 3832 4.037927 TCAAGACCCAGAAATACCCCTAG 58.962 47.826 0.00 0.00 0.00 3.02
2907 3833 3.778629 GTCAAGACCCAGAAATACCCCTA 59.221 47.826 0.00 0.00 0.00 3.53
2908 3834 2.576648 GTCAAGACCCAGAAATACCCCT 59.423 50.000 0.00 0.00 0.00 4.79
2909 3835 2.679930 CGTCAAGACCCAGAAATACCCC 60.680 54.545 0.00 0.00 0.00 4.95
2910 3836 2.027469 ACGTCAAGACCCAGAAATACCC 60.027 50.000 0.00 0.00 0.00 3.69
2911 3837 3.000727 CACGTCAAGACCCAGAAATACC 58.999 50.000 0.00 0.00 0.00 2.73
2912 3838 3.921677 TCACGTCAAGACCCAGAAATAC 58.078 45.455 0.00 0.00 0.00 1.89
2913 3839 4.610605 TTCACGTCAAGACCCAGAAATA 57.389 40.909 0.00 0.00 0.00 1.40
2914 3840 3.485463 TTCACGTCAAGACCCAGAAAT 57.515 42.857 0.00 0.00 0.00 2.17
2915 3841 2.992124 TTCACGTCAAGACCCAGAAA 57.008 45.000 0.00 0.00 0.00 2.52
2916 3842 3.306502 GGTATTCACGTCAAGACCCAGAA 60.307 47.826 4.42 0.00 32.32 3.02
2917 3843 2.232941 GGTATTCACGTCAAGACCCAGA 59.767 50.000 4.42 0.00 32.32 3.86
2918 3844 2.618053 GGTATTCACGTCAAGACCCAG 58.382 52.381 4.42 0.00 32.32 4.45
2919 3845 2.754946 GGTATTCACGTCAAGACCCA 57.245 50.000 4.42 0.00 32.32 4.51
2921 3847 2.754946 TGGGTATTCACGTCAAGACC 57.245 50.000 7.53 7.53 36.98 3.85
2922 3848 6.920569 AATTATGGGTATTCACGTCAAGAC 57.079 37.500 0.00 0.00 0.00 3.01
2923 3849 7.931578 AAAATTATGGGTATTCACGTCAAGA 57.068 32.000 0.00 0.00 0.00 3.02
2924 3850 9.498307 GTAAAAATTATGGGTATTCACGTCAAG 57.502 33.333 0.00 0.00 0.00 3.02
2925 3851 9.011095 TGTAAAAATTATGGGTATTCACGTCAA 57.989 29.630 0.00 0.00 0.00 3.18
2926 3852 8.563123 TGTAAAAATTATGGGTATTCACGTCA 57.437 30.769 0.00 0.00 0.00 4.35
2927 3853 9.843334 TTTGTAAAAATTATGGGTATTCACGTC 57.157 29.630 0.00 0.00 0.00 4.34
2928 3854 9.628746 GTTTGTAAAAATTATGGGTATTCACGT 57.371 29.630 0.00 0.00 0.00 4.49
2929 3855 9.627395 TGTTTGTAAAAATTATGGGTATTCACG 57.373 29.630 0.00 0.00 0.00 4.35
2935 3861 9.751542 CAACACTGTTTGTAAAAATTATGGGTA 57.248 29.630 0.00 0.00 37.51 3.69
2936 3862 8.478877 TCAACACTGTTTGTAAAAATTATGGGT 58.521 29.630 0.00 0.00 37.51 4.51
2937 3863 8.879342 TCAACACTGTTTGTAAAAATTATGGG 57.121 30.769 0.00 0.00 37.51 4.00
2943 3869 8.180920 GCCAAAATCAACACTGTTTGTAAAAAT 58.819 29.630 0.00 0.00 37.51 1.82
2944 3870 7.173218 TGCCAAAATCAACACTGTTTGTAAAAA 59.827 29.630 0.00 0.00 37.51 1.94
2945 3871 6.650807 TGCCAAAATCAACACTGTTTGTAAAA 59.349 30.769 0.00 0.00 37.51 1.52
2946 3872 6.166279 TGCCAAAATCAACACTGTTTGTAAA 58.834 32.000 0.00 0.00 37.51 2.01
2947 3873 5.724328 TGCCAAAATCAACACTGTTTGTAA 58.276 33.333 0.00 0.00 37.51 2.41
2948 3874 5.330455 TGCCAAAATCAACACTGTTTGTA 57.670 34.783 0.00 0.00 37.51 2.41
2949 3875 4.199432 TGCCAAAATCAACACTGTTTGT 57.801 36.364 0.00 0.00 41.74 2.83
2950 3876 5.542616 TTTGCCAAAATCAACACTGTTTG 57.457 34.783 0.00 0.00 0.00 2.93
2951 3877 5.936956 TCTTTTGCCAAAATCAACACTGTTT 59.063 32.000 2.58 0.00 0.00 2.83
2952 3878 5.486526 TCTTTTGCCAAAATCAACACTGTT 58.513 33.333 2.58 0.00 0.00 3.16
2953 3879 5.083533 TCTTTTGCCAAAATCAACACTGT 57.916 34.783 2.58 0.00 0.00 3.55
2954 3880 5.005971 CACTCTTTTGCCAAAATCAACACTG 59.994 40.000 2.58 0.00 0.00 3.66
2955 3881 5.105392 TCACTCTTTTGCCAAAATCAACACT 60.105 36.000 2.58 0.00 0.00 3.55
2956 3882 5.005682 GTCACTCTTTTGCCAAAATCAACAC 59.994 40.000 2.58 0.00 0.00 3.32
2957 3883 5.108517 GTCACTCTTTTGCCAAAATCAACA 58.891 37.500 2.58 0.00 0.00 3.33
2958 3884 5.108517 TGTCACTCTTTTGCCAAAATCAAC 58.891 37.500 2.58 0.00 0.00 3.18
2959 3885 5.336150 TGTCACTCTTTTGCCAAAATCAA 57.664 34.783 2.58 0.00 0.00 2.57
2960 3886 4.998671 TGTCACTCTTTTGCCAAAATCA 57.001 36.364 2.58 0.00 0.00 2.57
2961 3887 6.849588 AATTGTCACTCTTTTGCCAAAATC 57.150 33.333 2.58 0.00 0.00 2.17
2962 3888 7.628769 AAAATTGTCACTCTTTTGCCAAAAT 57.371 28.000 2.58 0.00 0.00 1.82
2963 3889 7.173907 TCAAAAATTGTCACTCTTTTGCCAAAA 59.826 29.630 2.15 2.15 38.21 2.44
2964 3890 6.652481 TCAAAAATTGTCACTCTTTTGCCAAA 59.348 30.769 7.74 0.00 38.21 3.28
2965 3891 6.169094 TCAAAAATTGTCACTCTTTTGCCAA 58.831 32.000 7.74 0.00 38.21 4.52
2966 3892 5.728471 TCAAAAATTGTCACTCTTTTGCCA 58.272 33.333 7.74 0.00 38.21 4.92
2967 3893 6.660887 TTCAAAAATTGTCACTCTTTTGCC 57.339 33.333 7.74 0.00 38.21 4.52
2968 3894 8.839914 GTTTTTCAAAAATTGTCACTCTTTTGC 58.160 29.630 0.00 0.00 38.21 3.68
2969 3895 9.875675 TGTTTTTCAAAAATTGTCACTCTTTTG 57.124 25.926 0.00 0.00 39.18 2.44
2971 3897 8.229811 GCTGTTTTTCAAAAATTGTCACTCTTT 58.770 29.630 0.00 0.00 0.00 2.52
2972 3898 7.387397 TGCTGTTTTTCAAAAATTGTCACTCTT 59.613 29.630 0.00 0.00 0.00 2.85
2973 3899 6.873076 TGCTGTTTTTCAAAAATTGTCACTCT 59.127 30.769 0.00 0.00 0.00 3.24
2974 3900 7.059448 TGCTGTTTTTCAAAAATTGTCACTC 57.941 32.000 0.00 0.00 0.00 3.51
2975 3901 7.432350 TTGCTGTTTTTCAAAAATTGTCACT 57.568 28.000 0.00 0.00 0.00 3.41
2976 3902 7.961827 TCATTGCTGTTTTTCAAAAATTGTCAC 59.038 29.630 0.00 0.00 0.00 3.67
2977 3903 8.037382 TCATTGCTGTTTTTCAAAAATTGTCA 57.963 26.923 0.00 0.00 0.00 3.58
2978 3904 9.505995 AATCATTGCTGTTTTTCAAAAATTGTC 57.494 25.926 0.00 0.00 0.00 3.18
2979 3905 9.857957 AAATCATTGCTGTTTTTCAAAAATTGT 57.142 22.222 0.00 0.00 0.00 2.71
2982 3908 9.303537 CCAAAATCATTGCTGTTTTTCAAAAAT 57.696 25.926 0.00 0.00 33.88 1.82
2983 3909 8.302438 ACCAAAATCATTGCTGTTTTTCAAAAA 58.698 25.926 0.00 0.00 33.88 1.94
2984 3910 7.824672 ACCAAAATCATTGCTGTTTTTCAAAA 58.175 26.923 0.00 0.00 33.88 2.44
2985 3911 7.388460 ACCAAAATCATTGCTGTTTTTCAAA 57.612 28.000 0.00 0.00 33.88 2.69
2986 3912 6.998968 ACCAAAATCATTGCTGTTTTTCAA 57.001 29.167 0.00 0.00 33.88 2.69
2987 3913 8.498054 TTTACCAAAATCATTGCTGTTTTTCA 57.502 26.923 0.00 0.00 33.88 2.69
2988 3914 9.949174 ATTTTACCAAAATCATTGCTGTTTTTC 57.051 25.926 0.00 0.00 36.38 2.29
2989 3915 9.733219 CATTTTACCAAAATCATTGCTGTTTTT 57.267 25.926 0.00 0.00 38.97 1.94
2990 3916 9.118300 TCATTTTACCAAAATCATTGCTGTTTT 57.882 25.926 0.00 0.00 38.97 2.43
2991 3917 8.674263 TCATTTTACCAAAATCATTGCTGTTT 57.326 26.923 0.00 0.00 38.97 2.83
2992 3918 8.674263 TTCATTTTACCAAAATCATTGCTGTT 57.326 26.923 0.00 0.00 38.97 3.16
2993 3919 8.851541 ATTCATTTTACCAAAATCATTGCTGT 57.148 26.923 0.00 0.00 38.97 4.40
2995 3921 9.941325 TGTATTCATTTTACCAAAATCATTGCT 57.059 25.926 0.00 0.00 38.97 3.91
2996 3922 9.971744 GTGTATTCATTTTACCAAAATCATTGC 57.028 29.630 0.00 0.00 38.97 3.56
3007 3933 9.887406 CGGGTATTTATGTGTATTCATTTTACC 57.113 33.333 0.00 0.00 31.83 2.85
3012 3938 8.296713 GCAATCGGGTATTTATGTGTATTCATT 58.703 33.333 0.00 0.00 0.00 2.57
3013 3939 7.446931 TGCAATCGGGTATTTATGTGTATTCAT 59.553 33.333 0.00 0.00 0.00 2.57
3014 3940 6.768381 TGCAATCGGGTATTTATGTGTATTCA 59.232 34.615 0.00 0.00 0.00 2.57
3015 3941 7.197071 TGCAATCGGGTATTTATGTGTATTC 57.803 36.000 0.00 0.00 0.00 1.75
3016 3942 7.575414 TTGCAATCGGGTATTTATGTGTATT 57.425 32.000 0.00 0.00 0.00 1.89
3017 3943 7.575414 TTTGCAATCGGGTATTTATGTGTAT 57.425 32.000 0.00 0.00 0.00 2.29
3018 3944 7.575414 ATTTGCAATCGGGTATTTATGTGTA 57.425 32.000 0.00 0.00 0.00 2.90
3019 3945 5.906113 TTTGCAATCGGGTATTTATGTGT 57.094 34.783 0.00 0.00 0.00 3.72
3020 3946 6.420604 GGAATTTGCAATCGGGTATTTATGTG 59.579 38.462 0.00 0.00 0.00 3.21
3021 3947 6.323739 AGGAATTTGCAATCGGGTATTTATGT 59.676 34.615 0.00 0.00 0.00 2.29
3022 3948 6.642131 CAGGAATTTGCAATCGGGTATTTATG 59.358 38.462 0.00 0.00 0.00 1.90
3023 3949 6.239289 CCAGGAATTTGCAATCGGGTATTTAT 60.239 38.462 0.00 0.00 0.00 1.40
3024 3950 5.068460 CCAGGAATTTGCAATCGGGTATTTA 59.932 40.000 0.00 0.00 0.00 1.40
3025 3951 4.141959 CCAGGAATTTGCAATCGGGTATTT 60.142 41.667 0.00 0.00 0.00 1.40
3026 3952 3.384467 CCAGGAATTTGCAATCGGGTATT 59.616 43.478 0.00 0.00 0.00 1.89
3027 3953 2.958355 CCAGGAATTTGCAATCGGGTAT 59.042 45.455 0.00 0.00 0.00 2.73
3028 3954 2.025793 TCCAGGAATTTGCAATCGGGTA 60.026 45.455 0.00 0.00 0.00 3.69
3029 3955 1.185315 CCAGGAATTTGCAATCGGGT 58.815 50.000 0.00 0.00 0.00 5.28
3030 3956 1.406539 CTCCAGGAATTTGCAATCGGG 59.593 52.381 0.00 1.60 0.00 5.14
3031 3957 1.202336 GCTCCAGGAATTTGCAATCGG 60.202 52.381 0.00 0.00 0.00 4.18
3032 3958 1.202336 GGCTCCAGGAATTTGCAATCG 60.202 52.381 0.00 0.00 0.00 3.34
3033 3959 1.202336 CGGCTCCAGGAATTTGCAATC 60.202 52.381 0.00 0.00 0.00 2.67
3034 3960 0.819582 CGGCTCCAGGAATTTGCAAT 59.180 50.000 0.00 0.00 0.00 3.56
3035 3961 1.876497 GCGGCTCCAGGAATTTGCAA 61.876 55.000 0.00 0.00 0.00 4.08
3036 3962 2.342650 GCGGCTCCAGGAATTTGCA 61.343 57.895 1.09 0.00 0.00 4.08
3037 3963 2.491621 GCGGCTCCAGGAATTTGC 59.508 61.111 0.00 0.00 0.00 3.68
3038 3964 1.678635 TGGCGGCTCCAGGAATTTG 60.679 57.895 11.43 0.00 40.72 2.32
3039 3965 2.763215 TGGCGGCTCCAGGAATTT 59.237 55.556 11.43 0.00 40.72 1.82
3054 3980 4.619227 AGGTGTTGCCGACGGTGG 62.619 66.667 16.73 0.00 43.70 4.61
3055 3981 3.041940 GAGGTGTTGCCGACGGTG 61.042 66.667 16.73 0.00 43.70 4.94
3056 3982 4.309950 GGAGGTGTTGCCGACGGT 62.310 66.667 16.73 0.00 43.70 4.83
3057 3983 3.934391 GAGGAGGTGTTGCCGACGG 62.934 68.421 10.29 10.29 43.70 4.79
3058 3984 2.432628 GAGGAGGTGTTGCCGACG 60.433 66.667 0.00 0.00 43.70 5.12
3059 3985 2.047179 GGAGGAGGTGTTGCCGAC 60.047 66.667 0.00 0.00 43.70 4.79
3060 3986 1.841556 AAGGAGGAGGTGTTGCCGA 60.842 57.895 0.00 0.00 43.70 5.54
3061 3987 1.672356 CAAGGAGGAGGTGTTGCCG 60.672 63.158 0.00 0.00 43.70 5.69
3062 3988 0.606673 GTCAAGGAGGAGGTGTTGCC 60.607 60.000 0.00 0.00 37.58 4.52
3063 3989 0.951040 CGTCAAGGAGGAGGTGTTGC 60.951 60.000 0.00 0.00 0.00 4.17
3064 3990 0.679505 TCGTCAAGGAGGAGGTGTTG 59.320 55.000 0.00 0.00 0.00 3.33
3065 3991 1.420430 TTCGTCAAGGAGGAGGTGTT 58.580 50.000 0.00 0.00 0.00 3.32
3066 3992 1.420430 TTTCGTCAAGGAGGAGGTGT 58.580 50.000 0.00 0.00 0.00 4.16
3067 3993 2.744202 CAATTTCGTCAAGGAGGAGGTG 59.256 50.000 0.00 0.00 0.00 4.00
3068 3994 2.876079 GCAATTTCGTCAAGGAGGAGGT 60.876 50.000 0.00 0.00 0.00 3.85
3069 3995 1.740025 GCAATTTCGTCAAGGAGGAGG 59.260 52.381 0.00 0.00 0.00 4.30
3070 3996 1.740025 GGCAATTTCGTCAAGGAGGAG 59.260 52.381 0.00 0.00 0.00 3.69
3071 3997 1.073125 TGGCAATTTCGTCAAGGAGGA 59.927 47.619 0.00 0.00 0.00 3.71
3072 3998 1.533625 TGGCAATTTCGTCAAGGAGG 58.466 50.000 0.00 0.00 0.00 4.30
3073 3999 2.733227 GCATGGCAATTTCGTCAAGGAG 60.733 50.000 0.00 0.00 0.00 3.69
3074 4000 1.202114 GCATGGCAATTTCGTCAAGGA 59.798 47.619 0.00 0.00 0.00 3.36
3075 4001 1.632422 GCATGGCAATTTCGTCAAGG 58.368 50.000 0.00 0.00 0.00 3.61
3076 4002 1.632422 GGCATGGCAATTTCGTCAAG 58.368 50.000 15.47 0.00 0.00 3.02
3077 4003 3.810579 GGCATGGCAATTTCGTCAA 57.189 47.368 15.47 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.