Multiple sequence alignment - TraesCS2B01G077200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G077200 chr2B 100.000 6972 0 0 1 6972 42283133 42276162 0.000000e+00 12875.0
1 TraesCS2B01G077200 chr2B 89.855 276 18 6 6306 6577 474925613 474925344 5.180000e-91 346.0
2 TraesCS2B01G077200 chr2B 84.524 336 34 7 1244 1572 76113527 76113203 4.060000e-82 316.0
3 TraesCS2B01G077200 chr2A 88.501 2261 188 32 1 2232 29291423 29289206 0.000000e+00 2669.0
4 TraesCS2B01G077200 chr2A 86.850 1019 88 19 2291 3279 29289209 29288207 0.000000e+00 1098.0
5 TraesCS2B01G077200 chr2A 90.419 835 58 11 1244 2069 663485247 663484426 0.000000e+00 1079.0
6 TraesCS2B01G077200 chr2A 91.228 684 54 4 5597 6279 29271641 29270963 0.000000e+00 926.0
7 TraesCS2B01G077200 chr2A 84.107 969 95 25 3388 4330 29287977 29287042 0.000000e+00 881.0
8 TraesCS2B01G077200 chr2A 89.327 609 45 10 1244 1845 687145059 687144464 0.000000e+00 747.0
9 TraesCS2B01G077200 chr2A 85.064 703 79 14 5003 5702 29286350 29285671 0.000000e+00 693.0
10 TraesCS2B01G077200 chr2A 88.117 547 47 10 5731 6274 29285672 29285141 9.870000e-178 634.0
11 TraesCS2B01G077200 chr2A 90.995 422 22 7 4465 4877 29287043 29286629 7.900000e-154 555.0
12 TraesCS2B01G077200 chr2A 90.335 269 16 6 6306 6570 335805951 335806213 1.860000e-90 344.0
13 TraesCS2B01G077200 chr2A 89.855 276 17 7 6306 6577 726901777 726902045 1.860000e-90 344.0
14 TraesCS2B01G077200 chr2A 83.108 296 28 13 6687 6972 29270792 29270509 4.180000e-62 250.0
15 TraesCS2B01G077200 chr2D 91.615 1300 64 16 1021 2296 27079492 27078214 0.000000e+00 1755.0
16 TraesCS2B01G077200 chr2D 91.674 1129 71 10 5286 6408 27074803 27073692 0.000000e+00 1543.0
17 TraesCS2B01G077200 chr2D 96.437 870 24 3 2401 3269 27078115 27077252 0.000000e+00 1428.0
18 TraesCS2B01G077200 chr2D 86.338 1054 96 19 3377 4409 27077254 27076228 0.000000e+00 1105.0
19 TraesCS2B01G077200 chr2D 91.702 470 18 5 4419 4879 27076141 27075684 3.550000e-177 632.0
20 TraesCS2B01G077200 chr2D 84.298 484 59 12 459 926 27080285 27079803 2.290000e-124 457.0
21 TraesCS2B01G077200 chr2D 84.559 408 36 8 6579 6971 27073330 27072935 5.100000e-101 379.0
22 TraesCS2B01G077200 chr2D 85.593 354 27 10 5020 5369 27075154 27074821 4.000000e-92 350.0
23 TraesCS2B01G077200 chr2D 79.045 377 58 9 84 449 27081740 27081374 9.040000e-59 239.0
24 TraesCS2B01G077200 chr2D 97.403 77 2 0 2329 2405 27078217 27078141 1.580000e-26 132.0
25 TraesCS2B01G077200 chr7A 90.180 835 58 18 1244 2069 588527510 588526691 0.000000e+00 1066.0
26 TraesCS2B01G077200 chr7A 85.246 61 4 4 3239 3295 184652535 184652476 2.720000e-04 58.4
27 TraesCS2B01G077200 chr3B 90.253 831 60 11 1244 2066 744524258 744525075 0.000000e+00 1066.0
28 TraesCS2B01G077200 chr3B 89.843 827 59 15 1244 2062 786271970 786272779 0.000000e+00 1038.0
29 TraesCS2B01G077200 chr7B 90.156 833 60 14 1244 2069 13163991 13163174 0.000000e+00 1064.0
30 TraesCS2B01G077200 chr7B 89.493 276 17 6 6306 6577 663094748 663095015 8.660000e-89 339.0
31 TraesCS2B01G077200 chr3A 89.904 832 66 14 1244 2069 625657561 625656742 0.000000e+00 1055.0
32 TraesCS2B01G077200 chr3A 85.816 423 43 6 1246 1662 731918951 731918540 3.860000e-117 433.0
33 TraesCS2B01G077200 chr3A 94.828 116 6 0 3264 3379 117944538 117944653 1.540000e-41 182.0
34 TraesCS2B01G077200 chr3A 94.690 113 5 1 3267 3379 373020521 373020632 2.590000e-39 174.0
35 TraesCS2B01G077200 chr1B 90.000 830 61 11 1246 2066 152509818 152510634 0.000000e+00 1053.0
36 TraesCS2B01G077200 chr4A 88.691 619 50 12 1244 1854 597780453 597781059 0.000000e+00 737.0
37 TraesCS2B01G077200 chrUn 89.855 276 18 6 6306 6577 405770980 405770711 5.180000e-91 346.0
38 TraesCS2B01G077200 chr1A 89.855 276 18 6 6306 6577 554465451 554465182 5.180000e-91 346.0
39 TraesCS2B01G077200 chr1A 89.493 276 18 7 6306 6577 532087666 532087398 8.660000e-89 339.0
40 TraesCS2B01G077200 chr1A 89.493 276 18 7 6306 6577 554464920 554464652 8.660000e-89 339.0
41 TraesCS2B01G077200 chr5D 89.286 280 16 8 6306 6577 87533933 87534206 8.660000e-89 339.0
42 TraesCS2B01G077200 chr3D 97.345 113 3 0 3267 3379 394956516 394956404 7.140000e-45 193.0
43 TraesCS2B01G077200 chr3D 95.536 112 3 1 3268 3379 281004994 281004885 2.000000e-40 178.0
44 TraesCS2B01G077200 chr3D 93.333 120 6 1 3268 3385 138182858 138182977 7.190000e-40 176.0
45 TraesCS2B01G077200 chr7D 97.345 113 2 1 3267 3379 335401492 335401381 2.570000e-44 191.0
46 TraesCS2B01G077200 chr7D 95.690 116 3 2 3268 3382 55399129 55399015 1.190000e-42 185.0
47 TraesCS2B01G077200 chr4B 96.364 110 4 0 3271 3380 424274505 424274396 1.540000e-41 182.0
48 TraesCS2B01G077200 chr1D 94.783 115 4 1 3267 3379 479527221 479527107 2.000000e-40 178.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G077200 chr2B 42276162 42283133 6971 True 12875.000000 12875 100.000000 1 6972 1 chr2B.!!$R1 6971
1 TraesCS2B01G077200 chr2A 29285141 29291423 6282 True 1088.333333 2669 87.272333 1 6274 6 chr2A.!!$R4 6273
2 TraesCS2B01G077200 chr2A 663484426 663485247 821 True 1079.000000 1079 90.419000 1244 2069 1 chr2A.!!$R1 825
3 TraesCS2B01G077200 chr2A 687144464 687145059 595 True 747.000000 747 89.327000 1244 1845 1 chr2A.!!$R2 601
4 TraesCS2B01G077200 chr2A 29270509 29271641 1132 True 588.000000 926 87.168000 5597 6972 2 chr2A.!!$R3 1375
5 TraesCS2B01G077200 chr2D 27072935 27081740 8805 True 802.000000 1755 88.866400 84 6971 10 chr2D.!!$R1 6887
6 TraesCS2B01G077200 chr7A 588526691 588527510 819 True 1066.000000 1066 90.180000 1244 2069 1 chr7A.!!$R2 825
7 TraesCS2B01G077200 chr3B 744524258 744525075 817 False 1066.000000 1066 90.253000 1244 2066 1 chr3B.!!$F1 822
8 TraesCS2B01G077200 chr3B 786271970 786272779 809 False 1038.000000 1038 89.843000 1244 2062 1 chr3B.!!$F2 818
9 TraesCS2B01G077200 chr7B 13163174 13163991 817 True 1064.000000 1064 90.156000 1244 2069 1 chr7B.!!$R1 825
10 TraesCS2B01G077200 chr3A 625656742 625657561 819 True 1055.000000 1055 89.904000 1244 2069 1 chr3A.!!$R1 825
11 TraesCS2B01G077200 chr1B 152509818 152510634 816 False 1053.000000 1053 90.000000 1246 2066 1 chr1B.!!$F1 820
12 TraesCS2B01G077200 chr4A 597780453 597781059 606 False 737.000000 737 88.691000 1244 1854 1 chr4A.!!$F1 610
13 TraesCS2B01G077200 chr1A 554464652 554465451 799 True 342.500000 346 89.674000 6306 6577 2 chr1A.!!$R2 271

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
54 55 0.243636 GTTGTGCACAAGTATGGGGC 59.756 55.0 31.81 14.10 40.74 5.80 F
139 140 0.301388 CGATGCAACGCGAATGATGA 59.699 50.0 15.93 0.00 0.00 2.92 F
632 1737 0.304705 CACGCACACTCAACTGTTCC 59.695 55.0 0.00 0.00 0.00 3.62 F
1426 2755 0.392998 TCGGCTCTCTGGAAAATGGC 60.393 55.0 0.00 0.00 0.00 4.40 F
2335 3706 0.883833 CTTGGTGCTGATGTTGTCCC 59.116 55.0 0.00 0.00 0.00 4.46 F
3280 4689 0.108281 GCCTTGTACTCCCTCCGTTC 60.108 60.0 0.00 0.00 0.00 3.95 F
3610 5143 0.033090 CATCATCTCGCAGGCTGCTA 59.967 55.0 34.17 24.42 42.25 3.49 F
3848 5393 0.530650 AGCATAGTGGCGTCCATTCG 60.531 55.0 1.90 0.00 39.27 3.34 F
5243 7381 0.322277 CATGCTGAAGTGCTGTCCCT 60.322 55.0 0.00 0.00 0.00 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1407 2731 0.392998 GCCATTTTCCAGAGAGCCGA 60.393 55.0 0.00 0.0 0.00 5.54 R
1417 2741 0.463833 ACGGGATCTCGCCATTTTCC 60.464 55.0 16.63 0.0 0.00 3.13 R
2315 3686 0.242017 GGACAACATCAGCACCAAGC 59.758 55.0 0.00 0.0 46.19 4.01 R
2789 4197 0.322975 AGGAGATTGTGCAGAACGCT 59.677 50.0 0.00 0.0 43.06 5.07 R
3356 4765 0.325602 TCCCGCGGTTCCAAATTACT 59.674 50.0 26.12 0.0 0.00 2.24 R
4431 6083 0.850100 TTGGAACATGGGTGTGACCT 59.150 50.0 0.00 0.0 39.30 3.85 R
5078 7212 0.948678 GCGCAACTTACCTTCCACAA 59.051 50.0 0.30 0.0 0.00 3.33 R
5450 7681 1.171308 CTGCATCAGAGTTTGGGTGG 58.829 55.0 0.00 0.0 32.44 4.61 R
6543 9325 0.174845 CCGAGGCATCCTAACGAACA 59.825 55.0 0.00 0.0 31.76 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.697756 CAAGCCCTTGCCGTCGGA 62.698 66.667 17.49 0.00 38.69 4.55
33 34 1.030457 CCGTCGGATAGGCTACAACT 58.970 55.000 4.91 0.00 0.00 3.16
35 36 1.269102 CGTCGGATAGGCTACAACTGG 60.269 57.143 0.00 0.00 0.00 4.00
36 37 1.755380 GTCGGATAGGCTACAACTGGT 59.245 52.381 0.00 0.00 0.00 4.00
38 39 2.167693 TCGGATAGGCTACAACTGGTTG 59.832 50.000 11.35 11.35 45.58 3.77
54 55 0.243636 GTTGTGCACAAGTATGGGGC 59.756 55.000 31.81 14.10 40.74 5.80
64 65 4.889409 CACAAGTATGGGGCACTAAATCAT 59.111 41.667 0.00 0.00 0.00 2.45
139 140 0.301388 CGATGCAACGCGAATGATGA 59.699 50.000 15.93 0.00 0.00 2.92
151 152 3.912563 GCGAATGATGACATGATGAATGC 59.087 43.478 0.00 0.00 40.22 3.56
160 161 5.809464 TGACATGATGAATGCAACGAATAC 58.191 37.500 0.00 0.00 40.22 1.89
205 217 0.526662 ACTACGGAAAGCTGGTCTCG 59.473 55.000 0.00 0.00 0.00 4.04
224 236 6.239120 GGTCTCGGGCTGTTACAACTATATTA 60.239 42.308 0.00 0.00 0.00 0.98
348 360 6.148480 CCGGGTGATGAAAAATGCAAAATTTA 59.852 34.615 0.00 0.00 0.00 1.40
350 362 8.072567 CGGGTGATGAAAAATGCAAAATTTAAA 58.927 29.630 0.00 0.00 0.00 1.52
383 395 5.590663 TGTAAAACCACTTTCTGTATGCACA 59.409 36.000 0.00 0.00 0.00 4.57
391 403 7.495934 ACCACTTTCTGTATGCACAAGATATAC 59.504 37.037 0.00 0.00 33.22 1.47
418 430 1.126488 TGGAGATGCTCTGATCACCC 58.874 55.000 0.00 0.00 33.41 4.61
432 444 1.520787 CACCCAGGGACGCGATAAC 60.521 63.158 15.93 0.00 0.00 1.89
453 465 3.186409 ACGTTTGATCAAAGGACACATCG 59.814 43.478 35.28 26.02 38.93 3.84
477 1568 7.008859 CGATAAAAATCGCAAGCAAAATTGTT 58.991 30.769 0.00 0.00 37.24 2.83
482 1573 1.261089 CGCAAGCAAAATTGTTGGTGG 59.739 47.619 0.00 0.00 32.56 4.61
515 1612 0.673644 AGGGAAAATCGTGGTGCTCG 60.674 55.000 0.00 0.00 0.00 5.03
570 1668 1.885388 TTGTCACGTTCAGCCGGTG 60.885 57.895 1.90 0.00 0.00 4.94
599 1701 0.749649 CGAGTCCCCATTCTCCAGAG 59.250 60.000 0.00 0.00 0.00 3.35
602 1704 0.985490 GTCCCCATTCTCCAGAGCCT 60.985 60.000 0.00 0.00 0.00 4.58
626 1731 1.010797 CACAGCACGCACACTCAAC 60.011 57.895 0.00 0.00 0.00 3.18
628 1733 1.277739 CAGCACGCACACTCAACTG 59.722 57.895 0.00 0.00 0.00 3.16
629 1734 1.153369 AGCACGCACACTCAACTGT 60.153 52.632 0.00 0.00 0.00 3.55
632 1737 0.304705 CACGCACACTCAACTGTTCC 59.695 55.000 0.00 0.00 0.00 3.62
642 1747 2.547211 CTCAACTGTTCCAGCTGACAAG 59.453 50.000 17.39 9.55 32.58 3.16
649 1754 2.113774 CAGCTGACAAGTGGGCCA 59.886 61.111 8.42 0.00 0.00 5.36
681 1786 2.352422 GCCCACATGTCAGCCAGA 59.648 61.111 0.00 0.00 0.00 3.86
682 1787 1.077212 GCCCACATGTCAGCCAGAT 60.077 57.895 0.00 0.00 0.00 2.90
683 1788 0.682209 GCCCACATGTCAGCCAGATT 60.682 55.000 0.00 0.00 0.00 2.40
684 1789 1.843368 CCCACATGTCAGCCAGATTT 58.157 50.000 0.00 0.00 0.00 2.17
686 1791 1.747355 CCACATGTCAGCCAGATTTCC 59.253 52.381 0.00 0.00 0.00 3.13
687 1792 2.619849 CCACATGTCAGCCAGATTTCCT 60.620 50.000 0.00 0.00 0.00 3.36
692 1797 2.108075 TGTCAGCCAGATTTCCTTTCCA 59.892 45.455 0.00 0.00 0.00 3.53
693 1798 3.245371 TGTCAGCCAGATTTCCTTTCCAT 60.245 43.478 0.00 0.00 0.00 3.41
695 1800 4.949856 GTCAGCCAGATTTCCTTTCCATTA 59.050 41.667 0.00 0.00 0.00 1.90
721 1826 1.754803 TCGATTACATTCACGCCCTCT 59.245 47.619 0.00 0.00 0.00 3.69
775 1880 1.067213 AGAGGAAAAGAGCGCAGAGAC 60.067 52.381 11.47 0.00 0.00 3.36
782 1887 3.073735 AGCGCAGAGACCCCTCAG 61.074 66.667 11.47 0.00 41.87 3.35
784 1889 2.650116 GCGCAGAGACCCCTCAGAA 61.650 63.158 0.30 0.00 41.87 3.02
788 1893 1.767681 GCAGAGACCCCTCAGAATCAT 59.232 52.381 0.00 0.00 41.87 2.45
791 1896 3.323403 CAGAGACCCCTCAGAATCATACC 59.677 52.174 0.00 0.00 41.87 2.73
799 1904 3.496130 CCTCAGAATCATACCATTCGCAC 59.504 47.826 0.00 0.00 37.77 5.34
803 1908 3.118261 AGAATCATACCATTCGCACCTGT 60.118 43.478 0.00 0.00 37.77 4.00
808 1914 2.671070 CATTCGCACCTGTCCCCT 59.329 61.111 0.00 0.00 0.00 4.79
826 1932 0.914644 CTTGCTCCTCTCCATTCCCA 59.085 55.000 0.00 0.00 0.00 4.37
829 1935 2.050144 TGCTCCTCTCCATTCCCATAC 58.950 52.381 0.00 0.00 0.00 2.39
832 1938 3.581101 CTCCTCTCCATTCCCATACAGA 58.419 50.000 0.00 0.00 0.00 3.41
843 1949 1.815421 CATACAGACCCAGTGCCGC 60.815 63.158 0.00 0.00 0.00 6.53
864 1970 4.433805 CGCAACGTAATTTCAGTACACCTC 60.434 45.833 0.00 0.00 0.00 3.85
875 1981 3.071023 TCAGTACACCTCAAGGACCAAAG 59.929 47.826 2.30 0.00 38.94 2.77
877 1983 1.518367 ACACCTCAAGGACCAAAGGA 58.482 50.000 12.40 0.00 38.94 3.36
884 1990 4.563786 CCTCAAGGACCAAAGGAGTAGAAC 60.564 50.000 0.00 0.00 37.39 3.01
890 1996 4.700692 GGACCAAAGGAGTAGAACATTTCC 59.299 45.833 0.00 0.00 0.00 3.13
1050 2372 4.864334 CCCAGGGCCACGATGAGC 62.864 72.222 6.18 0.00 0.00 4.26
1053 2375 3.474570 AGGGCCACGATGAGCTCC 61.475 66.667 12.15 0.00 0.00 4.70
1407 2731 0.523335 GCATTTTTCGATTCGCGCCT 60.523 50.000 0.00 0.00 40.61 5.52
1415 2739 4.577246 ATTCGCGCCTCGGCTCTC 62.577 66.667 0.00 0.00 39.32 3.20
1426 2755 0.392998 TCGGCTCTCTGGAAAATGGC 60.393 55.000 0.00 0.00 0.00 4.40
1444 2773 2.184322 GAGATCCCGTTGCGCTGA 59.816 61.111 9.73 0.00 0.00 4.26
1482 2812 2.936202 GGCATGGCCTTCAAATCTAGA 58.064 47.619 8.35 0.00 46.69 2.43
1483 2813 2.883386 GGCATGGCCTTCAAATCTAGAG 59.117 50.000 8.35 0.00 46.69 2.43
1500 2830 8.912787 AATCTAGAGTACGATTTTGTAGTGTG 57.087 34.615 0.00 0.00 0.00 3.82
1520 2850 8.547967 AGTGTGTTAGGTTAGATTTGTATGTG 57.452 34.615 0.00 0.00 0.00 3.21
1565 2895 9.904198 TCATTGGATCAAATTAGACTGTAATCA 57.096 29.630 0.00 0.00 0.00 2.57
1579 2909 4.752101 ACTGTAATCAGAGCTTGTCAACAC 59.248 41.667 2.17 0.00 43.76 3.32
1582 2912 5.409520 TGTAATCAGAGCTTGTCAACACATC 59.590 40.000 0.00 0.00 30.55 3.06
1590 2920 3.671928 GCTTGTCAACACATCATTTCTGC 59.328 43.478 0.00 0.00 30.55 4.26
1591 2921 4.558095 GCTTGTCAACACATCATTTCTGCT 60.558 41.667 0.00 0.00 30.55 4.24
1592 2922 4.754372 TGTCAACACATCATTTCTGCTC 57.246 40.909 0.00 0.00 0.00 4.26
1632 2965 3.635591 CTGTTGGGGAAATCTATGGCTT 58.364 45.455 0.00 0.00 0.00 4.35
1648 2981 2.637872 TGGCTTAGCACCTGTAGACTTT 59.362 45.455 6.53 0.00 0.00 2.66
1651 2984 5.221762 TGGCTTAGCACCTGTAGACTTTTTA 60.222 40.000 6.53 0.00 0.00 1.52
1679 3013 9.177608 TCTCTGCTTGTATTGCTTTATAATTGT 57.822 29.630 0.00 0.00 0.00 2.71
1833 3198 9.483062 GCTTATCTGAAATCATATTGTATTCGC 57.517 33.333 0.00 0.00 0.00 4.70
1904 3271 6.127793 AGAGCTGCAAAAGGATATGAATCTT 58.872 36.000 1.02 0.00 32.29 2.40
2031 3402 9.868277 AGCTAATTTATACAGAGATATCTGCAC 57.132 33.333 17.19 0.00 41.19 4.57
2179 3550 8.505625 CAACCTTTTATAAGCACATGCATTTTT 58.494 29.630 6.64 0.00 45.16 1.94
2223 3594 3.780850 GACCATCTTTTCTCCTTCCCCTA 59.219 47.826 0.00 0.00 0.00 3.53
2278 3649 7.285401 ACTCCCATATGGTATTTTCATGTGTTC 59.715 37.037 20.46 0.00 33.67 3.18
2313 3684 2.485814 GCTGCAGCCCTATTTATGTAGC 59.514 50.000 28.76 0.00 42.61 3.58
2314 3685 3.743521 CTGCAGCCCTATTTATGTAGCA 58.256 45.455 0.00 0.00 0.00 3.49
2315 3686 3.743521 TGCAGCCCTATTTATGTAGCAG 58.256 45.455 0.00 0.00 0.00 4.24
2316 3687 2.485814 GCAGCCCTATTTATGTAGCAGC 59.514 50.000 0.00 0.00 0.00 5.25
2317 3688 3.808618 GCAGCCCTATTTATGTAGCAGCT 60.809 47.826 0.00 0.00 33.00 4.24
2318 3689 4.392940 CAGCCCTATTTATGTAGCAGCTT 58.607 43.478 0.00 0.00 31.44 3.74
2319 3690 4.214971 CAGCCCTATTTATGTAGCAGCTTG 59.785 45.833 0.00 0.00 31.44 4.01
2320 3691 3.503748 GCCCTATTTATGTAGCAGCTTGG 59.496 47.826 0.00 0.00 0.00 3.61
2321 3692 4.718961 CCCTATTTATGTAGCAGCTTGGT 58.281 43.478 0.00 0.00 0.00 3.67
2322 3693 4.516698 CCCTATTTATGTAGCAGCTTGGTG 59.483 45.833 0.00 0.00 0.00 4.17
2323 3694 4.023707 CCTATTTATGTAGCAGCTTGGTGC 60.024 45.833 15.88 15.88 44.35 5.01
2335 3706 0.883833 CTTGGTGCTGATGTTGTCCC 59.116 55.000 0.00 0.00 0.00 4.46
2346 3717 2.668144 TGTTGTCCCTTAGGGTTTGG 57.332 50.000 18.01 0.00 44.74 3.28
2464 3870 1.067354 GCAAGAAAATGTCCCCTGCTG 60.067 52.381 0.00 0.00 0.00 4.41
2474 3880 1.139853 GTCCCCTGCTGTTCAGATAGG 59.860 57.143 3.84 9.57 45.72 2.57
2543 3951 5.942872 ACTTTCGAGATTTTTATGCTGGTG 58.057 37.500 0.00 0.00 0.00 4.17
2573 3981 7.526142 TGGTTATACAAACTTGCAAACCATA 57.474 32.000 9.26 0.00 40.00 2.74
2647 4055 4.314961 CTCAGGTGTACACATGCAAACTA 58.685 43.478 30.59 14.84 42.26 2.24
2789 4197 3.483808 TGTTCTGACATACTTGTGCCA 57.516 42.857 0.00 0.00 35.79 4.92
2815 4223 2.902486 TCTGCACAATCTCCTTGAGTCT 59.098 45.455 0.00 0.00 38.29 3.24
3089 4497 8.247562 TGCACTAAACTCTTGTGTTTAACATTT 58.752 29.630 0.00 0.00 40.49 2.32
3250 4659 5.106555 CGATGTTAATTTGTCTCTGGTGCTT 60.107 40.000 0.00 0.00 0.00 3.91
3276 4685 3.105283 TCTTTAGCCTTGTACTCCCTCC 58.895 50.000 0.00 0.00 0.00 4.30
3279 4688 0.544595 AGCCTTGTACTCCCTCCGTT 60.545 55.000 0.00 0.00 0.00 4.44
3280 4689 0.108281 GCCTTGTACTCCCTCCGTTC 60.108 60.000 0.00 0.00 0.00 3.95
3281 4690 0.535797 CCTTGTACTCCCTCCGTTCC 59.464 60.000 0.00 0.00 0.00 3.62
3282 4691 1.263356 CTTGTACTCCCTCCGTTCCA 58.737 55.000 0.00 0.00 0.00 3.53
3285 4694 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
3288 4697 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
3289 4698 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
3290 4699 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
3292 4701 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
3293 4702 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
3294 4703 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
3295 4704 2.030007 TCCGTTCCAAATTACTCGTCGT 60.030 45.455 0.00 0.00 0.00 4.34
3296 4705 2.091588 CCGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
3297 4706 2.091588 CGTTCCAAATTACTCGTCGTGG 59.908 50.000 0.00 0.00 0.00 4.94
3299 4708 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
3300 4709 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
3301 4710 4.128643 TCCAAATTACTCGTCGTGGTTTT 58.871 39.130 0.00 0.00 0.00 2.43
3302 4711 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
3303 4712 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
3304 4713 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
3305 4714 6.293027 CCAAATTACTCGTCGTGGTTTTAGTT 60.293 38.462 0.00 0.00 0.00 2.24
3306 4715 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
3308 4717 3.784338 ACTCGTCGTGGTTTTAGTTCAA 58.216 40.909 0.00 0.00 0.00 2.69
3309 4718 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
3312 4721 6.121613 TCGTCGTGGTTTTAGTTCAAATTT 57.878 33.333 0.00 0.00 0.00 1.82
3314 4723 5.966503 CGTCGTGGTTTTAGTTCAAATTTGA 59.033 36.000 16.91 16.91 34.92 2.69
3315 4724 6.469595 CGTCGTGGTTTTAGTTCAAATTTGAA 59.530 34.615 26.01 26.01 44.31 2.69
3328 4737 7.743520 TTCAAATTTGAACTAAAACCACGAC 57.256 32.000 26.01 0.00 41.88 4.34
3329 4738 5.966503 TCAAATTTGAACTAAAACCACGACG 59.033 36.000 18.45 0.00 33.55 5.12
3331 4740 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
3332 4741 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
3333 4742 4.566545 TGAACTAAAACCACGACGAGTA 57.433 40.909 0.00 0.00 0.00 2.59
3334 4743 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
3336 4745 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
3339 4748 6.652245 ACTAAAACCACGACGAGTAATTTTG 58.348 36.000 0.00 1.74 33.65 2.44
3341 4750 5.738118 AAACCACGACGAGTAATTTTGAA 57.262 34.783 0.00 0.00 0.00 2.69
3342 4751 4.720530 ACCACGACGAGTAATTTTGAAC 57.279 40.909 0.00 0.00 0.00 3.18
3343 4752 4.374399 ACCACGACGAGTAATTTTGAACT 58.626 39.130 0.00 0.00 0.00 3.01
3345 4754 5.984926 ACCACGACGAGTAATTTTGAACTAA 59.015 36.000 0.00 0.00 0.00 2.24
3346 4755 6.479660 ACCACGACGAGTAATTTTGAACTAAA 59.520 34.615 0.00 0.00 0.00 1.85
3348 4757 7.319615 CCACGACGAGTAATTTTGAACTAAAAC 59.680 37.037 0.00 0.00 40.80 2.43
3349 4758 7.319615 CACGACGAGTAATTTTGAACTAAAACC 59.680 37.037 0.00 0.00 40.80 3.27
3350 4759 7.011295 ACGACGAGTAATTTTGAACTAAAACCA 59.989 33.333 0.00 0.00 40.80 3.67
3351 4760 7.319615 CGACGAGTAATTTTGAACTAAAACCAC 59.680 37.037 0.00 0.00 40.80 4.16
3352 4761 7.127686 ACGAGTAATTTTGAACTAAAACCACG 58.872 34.615 0.00 0.00 40.80 4.94
3353 4762 7.011295 ACGAGTAATTTTGAACTAAAACCACGA 59.989 33.333 0.00 0.00 40.80 4.35
3354 4763 7.319615 CGAGTAATTTTGAACTAAAACCACGAC 59.680 37.037 0.00 0.00 40.80 4.34
3356 4765 5.738118 ATTTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 40.80 4.20
3357 4766 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
3358 4767 3.441496 TGAACTAAAACCACGACGAGT 57.559 42.857 0.00 0.00 0.00 4.18
3360 4769 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
3361 4770 5.531634 TGAACTAAAACCACGACGAGTAAT 58.468 37.500 0.00 0.00 0.00 1.89
3362 4771 5.984926 TGAACTAAAACCACGACGAGTAATT 59.015 36.000 0.00 1.08 0.00 1.40
3364 4773 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
3365 4774 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
3367 4776 3.389925 ACCACGACGAGTAATTTGGAA 57.610 42.857 0.00 0.00 0.00 3.53
3368 4777 3.062042 ACCACGACGAGTAATTTGGAAC 58.938 45.455 0.00 0.00 0.00 3.62
3369 4778 2.414138 CCACGACGAGTAATTTGGAACC 59.586 50.000 0.00 0.00 0.00 3.62
3370 4779 2.091588 CACGACGAGTAATTTGGAACCG 59.908 50.000 0.00 0.00 0.00 4.44
3371 4780 1.060122 CGACGAGTAATTTGGAACCGC 59.940 52.381 0.00 0.00 0.00 5.68
3372 4781 1.060122 GACGAGTAATTTGGAACCGCG 59.940 52.381 0.00 0.00 0.00 6.46
3375 4784 0.325602 AGTAATTTGGAACCGCGGGA 59.674 50.000 31.76 7.27 0.00 5.14
3376 4785 0.730840 GTAATTTGGAACCGCGGGAG 59.269 55.000 31.76 4.35 0.00 4.30
3378 4787 0.325602 AATTTGGAACCGCGGGAGTA 59.674 50.000 31.76 10.42 0.00 2.59
3390 4920 3.114065 CGCGGGAGTATGTTTTAGAGTC 58.886 50.000 0.00 0.00 0.00 3.36
3411 4941 3.128589 TCGCAGTTGCCATATTTCTTTCC 59.871 43.478 0.00 0.00 37.91 3.13
3419 4949 7.820872 AGTTGCCATATTTCTTTCCATTTGAAG 59.179 33.333 0.00 0.00 33.63 3.02
3472 5003 4.976116 GCAGTGTTTTACTTGGCAAGTTAG 59.024 41.667 35.13 15.70 42.81 2.34
3483 5014 3.955771 GGCAAGTTAGTTGACGAAACA 57.044 42.857 3.69 0.00 41.61 2.83
3488 5019 6.025280 GCAAGTTAGTTGACGAAACAAAGAA 58.975 36.000 3.69 0.00 41.61 2.52
3493 5024 8.938906 AGTTAGTTGACGAAACAAAGAACTTTA 58.061 29.630 8.13 0.00 41.61 1.85
3499 5030 5.827666 ACGAAACAAAGAACTTTACCATGG 58.172 37.500 11.19 11.19 0.00 3.66
3500 5031 5.591067 ACGAAACAAAGAACTTTACCATGGA 59.409 36.000 21.47 0.00 0.00 3.41
3501 5032 6.264518 ACGAAACAAAGAACTTTACCATGGAT 59.735 34.615 21.47 5.32 0.00 3.41
3561 5094 9.515020 TTCTTTGTTTTCAGTTTGCAGTATTAG 57.485 29.630 0.00 0.00 0.00 1.73
3587 5120 8.837389 GGTCCTTATAAACAAGAAAATCGCTAT 58.163 33.333 0.00 0.00 0.00 2.97
3610 5143 0.033090 CATCATCTCGCAGGCTGCTA 59.967 55.000 34.17 24.42 42.25 3.49
3611 5144 0.975135 ATCATCTCGCAGGCTGCTAT 59.025 50.000 34.17 22.15 42.25 2.97
3632 5172 1.888512 CATAAAGCCCAATCCCATCCG 59.111 52.381 0.00 0.00 0.00 4.18
3641 5181 3.244875 CCCAATCCCATCCGTGAATCATA 60.245 47.826 0.00 0.00 0.00 2.15
3648 5188 3.817084 CCATCCGTGAATCATACAATGCT 59.183 43.478 0.00 0.00 0.00 3.79
3653 5193 3.873361 CGTGAATCATACAATGCTGACCT 59.127 43.478 0.00 0.00 0.00 3.85
3657 5197 5.945191 TGAATCATACAATGCTGACCTCAAA 59.055 36.000 0.00 0.00 0.00 2.69
3669 5209 4.742138 GCTGACCTCAAACTCTCATATCCC 60.742 50.000 0.00 0.00 0.00 3.85
3681 5221 2.140792 ATATCCCGAACCGCTGGCT 61.141 57.895 0.00 0.00 0.00 4.75
3708 5251 2.094675 CCAATCCAACCCATGACTCAC 58.905 52.381 0.00 0.00 0.00 3.51
3713 5256 2.916269 TCCAACCCATGACTCACCATAA 59.084 45.455 0.00 0.00 0.00 1.90
3743 5286 2.853705 TCCCAAACCAACCTTAACTCG 58.146 47.619 0.00 0.00 0.00 4.18
3767 5310 2.969262 GGAATCTAGCCCTAGTTGCTCT 59.031 50.000 7.24 0.00 40.23 4.09
3783 5326 1.276421 GCTCTGTTGTCTCTGCCCTTA 59.724 52.381 0.00 0.00 0.00 2.69
3797 5340 2.278013 CTTACGGAGGCGCTCGTC 60.278 66.667 22.05 10.91 40.31 4.20
3798 5341 2.749044 TTACGGAGGCGCTCGTCT 60.749 61.111 22.05 5.48 40.31 4.18
3805 5348 2.104530 GGCGCTCGTCTACCTTCC 59.895 66.667 7.64 0.00 0.00 3.46
3820 5363 2.042464 CCTTCCTAGCTCTGGCACATA 58.958 52.381 0.00 0.00 41.70 2.29
3848 5393 0.530650 AGCATAGTGGCGTCCATTCG 60.531 55.000 1.90 0.00 39.27 3.34
3856 5401 1.084370 GGCGTCCATTCGTCTCCTTG 61.084 60.000 0.00 0.00 32.43 3.61
3896 5441 2.847234 TCCGCCCTGGTGTGTCTT 60.847 61.111 0.00 0.00 39.52 3.01
3958 5505 2.675348 GCTGATGTTCTGCTACTGTTCC 59.325 50.000 0.00 0.00 38.17 3.62
3959 5506 3.866066 GCTGATGTTCTGCTACTGTTCCA 60.866 47.826 0.00 0.00 38.17 3.53
3960 5507 3.664107 TGATGTTCTGCTACTGTTCCAC 58.336 45.455 0.00 0.00 0.00 4.02
3961 5508 3.324846 TGATGTTCTGCTACTGTTCCACT 59.675 43.478 0.00 0.00 0.00 4.00
3962 5509 3.111853 TGTTCTGCTACTGTTCCACTG 57.888 47.619 0.00 0.00 0.00 3.66
3995 5542 4.103357 CAGCTGAACTGCTATTTTGATGC 58.897 43.478 8.42 0.00 41.98 3.91
3997 5544 4.096081 AGCTGAACTGCTATTTTGATGCTC 59.904 41.667 4.49 0.00 42.10 4.26
4016 5563 5.312895 TGCTCTGAATTAGTTGCTTAACCA 58.687 37.500 0.00 0.00 0.00 3.67
4029 5576 6.096846 AGTTGCTTAACCAAAAACTGATGACT 59.903 34.615 0.00 0.00 30.17 3.41
4031 5578 4.681483 GCTTAACCAAAAACTGATGACTGC 59.319 41.667 0.00 0.00 0.00 4.40
4033 5580 2.571212 ACCAAAAACTGATGACTGCGA 58.429 42.857 0.00 0.00 0.00 5.10
4105 5670 5.750524 TGTTGCTATTTCTATGGGCACTTA 58.249 37.500 0.00 0.00 32.47 2.24
4106 5671 5.822519 TGTTGCTATTTCTATGGGCACTTAG 59.177 40.000 2.44 2.44 32.47 2.18
4145 5718 8.581253 AAGCTTTACTAAATAAACCAGATGCT 57.419 30.769 0.00 0.00 31.57 3.79
4161 5734 2.336945 TGCTCATCCCTACTGCATTG 57.663 50.000 0.00 0.00 0.00 2.82
4164 5737 2.357009 GCTCATCCCTACTGCATTGTTG 59.643 50.000 0.00 0.00 0.00 3.33
4186 5759 2.375174 TCCATGGCCTGAAAACTACACT 59.625 45.455 6.96 0.00 0.00 3.55
4220 5794 8.773404 TTTAGTGATCACTACTTTTAGGCTTC 57.227 34.615 30.75 0.00 43.02 3.86
4256 5830 2.626840 TGGCCAACTTTGTGCTTTTTC 58.373 42.857 0.61 0.00 0.00 2.29
4261 5835 3.622612 CCAACTTTGTGCTTTTTCCCTTG 59.377 43.478 0.00 0.00 0.00 3.61
4262 5836 3.541996 ACTTTGTGCTTTTTCCCTTGG 57.458 42.857 0.00 0.00 0.00 3.61
4293 5868 4.143030 CGAGTACTCAATCCTTTTGTGCAG 60.143 45.833 22.37 0.00 0.00 4.41
4303 5878 5.902613 TCCTTTTGTGCAGATCATTTAGG 57.097 39.130 0.00 0.00 0.00 2.69
4313 5888 9.605275 TGTGCAGATCATTTAGGCTTATATATC 57.395 33.333 0.00 0.00 0.00 1.63
4431 6083 2.637947 TGCAAGTAACACTGCTCACAA 58.362 42.857 0.00 0.00 0.00 3.33
4454 6106 1.133513 TCACACCCATGTTCCAAAGCT 60.134 47.619 0.00 0.00 36.72 3.74
4533 6185 6.650120 TGGAAGGAGTTAGGATTGTATTGAC 58.350 40.000 0.00 0.00 0.00 3.18
4640 6292 2.164219 CCTTGTGCATGTATTGTCACCC 59.836 50.000 0.00 0.00 33.86 4.61
4661 6313 4.219070 CCCAATATATACCGGACGACTTCA 59.781 45.833 9.46 0.00 0.00 3.02
4735 6387 5.136105 ACTTTCATCTTTCTTCTTGTGCCT 58.864 37.500 0.00 0.00 0.00 4.75
4742 6394 5.804639 TCTTTCTTCTTGTGCCTTGCTATA 58.195 37.500 0.00 0.00 0.00 1.31
4758 6410 9.418045 GCCTTGCTATAATGTTGTTTCTTTTTA 57.582 29.630 0.00 0.00 0.00 1.52
4840 6501 5.577835 TGTGAACTTGTGCTCATTGTTTAC 58.422 37.500 16.01 16.01 32.95 2.01
4861 6522 7.692460 TTACTGAGGTTTACATAGAGAACGA 57.308 36.000 0.00 0.00 0.00 3.85
4879 6540 9.113838 AGAGAACGATGTAAATTATCAAGCAAT 57.886 29.630 0.00 0.00 0.00 3.56
4881 6542 9.507280 AGAACGATGTAAATTATCAAGCAATTG 57.493 29.630 0.00 0.00 0.00 2.32
4931 6668 6.622549 AGTCGTATTACAGTTCTCTTTCCTG 58.377 40.000 0.00 0.00 0.00 3.86
4940 6677 9.847224 TTACAGTTCTCTTTCCTGTTTCTTATT 57.153 29.630 0.00 0.00 39.90 1.40
4941 6678 8.384607 ACAGTTCTCTTTCCTGTTTCTTATTC 57.615 34.615 0.00 0.00 36.03 1.75
4942 6679 8.214364 ACAGTTCTCTTTCCTGTTTCTTATTCT 58.786 33.333 0.00 0.00 36.03 2.40
4943 6680 9.061435 CAGTTCTCTTTCCTGTTTCTTATTCTT 57.939 33.333 0.00 0.00 0.00 2.52
4946 6683 8.779354 TCTCTTTCCTGTTTCTTATTCTTAGC 57.221 34.615 0.00 0.00 0.00 3.09
4948 6685 8.553459 TCTTTCCTGTTTCTTATTCTTAGCAG 57.447 34.615 0.00 0.00 0.00 4.24
4949 6686 8.375506 TCTTTCCTGTTTCTTATTCTTAGCAGA 58.624 33.333 0.00 0.00 0.00 4.26
4950 6687 9.171877 CTTTCCTGTTTCTTATTCTTAGCAGAT 57.828 33.333 0.00 0.00 0.00 2.90
4951 6688 8.723942 TTCCTGTTTCTTATTCTTAGCAGATC 57.276 34.615 0.00 0.00 0.00 2.75
4964 6710 7.488187 TCTTAGCAGATCTATGAAACAATGC 57.512 36.000 0.00 0.00 31.04 3.56
4965 6711 6.484643 TCTTAGCAGATCTATGAAACAATGCC 59.515 38.462 0.00 0.00 31.04 4.40
4993 6739 3.960102 TGCATGAGTTCTTTTGGTTCCTT 59.040 39.130 0.00 0.00 0.00 3.36
5005 6751 7.998580 TCTTTTGGTTCCTTTTTGTTACGTAT 58.001 30.769 0.00 0.00 0.00 3.06
5078 7212 6.469782 AAATGTGATTTTGTGAACCAGACT 57.530 33.333 0.00 0.00 0.00 3.24
5091 7225 3.771577 ACCAGACTTGTGGAAGGTAAG 57.228 47.619 0.00 0.00 40.44 2.34
5093 7227 3.458487 ACCAGACTTGTGGAAGGTAAGTT 59.542 43.478 0.00 0.00 40.44 2.66
5095 7229 3.251004 CAGACTTGTGGAAGGTAAGTTGC 59.749 47.826 0.00 0.00 34.99 4.17
5096 7230 2.218603 ACTTGTGGAAGGTAAGTTGCG 58.781 47.619 0.00 0.00 30.98 4.85
5097 7231 0.948678 TTGTGGAAGGTAAGTTGCGC 59.051 50.000 0.00 0.00 0.00 6.09
5099 7233 0.948678 GTGGAAGGTAAGTTGCGCAA 59.051 50.000 21.02 21.02 0.00 4.85
5101 7235 2.025155 TGGAAGGTAAGTTGCGCAAAA 58.975 42.857 26.87 10.84 0.00 2.44
5102 7236 2.223618 TGGAAGGTAAGTTGCGCAAAAC 60.224 45.455 26.87 21.62 0.00 2.43
5103 7237 2.223618 GGAAGGTAAGTTGCGCAAAACA 60.224 45.455 26.87 9.66 32.21 2.83
5104 7238 3.552068 GGAAGGTAAGTTGCGCAAAACAT 60.552 43.478 26.87 17.69 32.21 2.71
5105 7239 3.011949 AGGTAAGTTGCGCAAAACATG 57.988 42.857 26.87 0.00 32.21 3.21
5106 7240 2.621055 AGGTAAGTTGCGCAAAACATGA 59.379 40.909 26.87 4.32 32.21 3.07
5107 7241 2.979813 GGTAAGTTGCGCAAAACATGAG 59.020 45.455 26.87 0.00 32.21 2.90
5108 7242 3.304391 GGTAAGTTGCGCAAAACATGAGA 60.304 43.478 26.87 0.00 32.21 3.27
5109 7243 2.405892 AGTTGCGCAAAACATGAGAC 57.594 45.000 26.87 9.91 32.21 3.36
5110 7244 1.675483 AGTTGCGCAAAACATGAGACA 59.325 42.857 26.87 0.00 32.21 3.41
5111 7245 2.098934 AGTTGCGCAAAACATGAGACAA 59.901 40.909 26.87 0.00 32.21 3.18
5112 7246 2.857152 GTTGCGCAAAACATGAGACAAA 59.143 40.909 26.87 0.00 31.13 2.83
5113 7247 3.367992 TGCGCAAAACATGAGACAAAT 57.632 38.095 8.16 0.00 0.00 2.32
5114 7248 3.715495 TGCGCAAAACATGAGACAAATT 58.285 36.364 8.16 0.00 0.00 1.82
5115 7249 3.735240 TGCGCAAAACATGAGACAAATTC 59.265 39.130 8.16 0.00 0.00 2.17
5141 7275 5.888982 AATACTATGATTCCGTGAACCCT 57.111 39.130 0.00 0.00 0.00 4.34
5222 7360 5.027460 TCCTAAATGCAGGACAGGTTAGTA 58.973 41.667 0.00 0.00 39.89 1.82
5233 7371 4.631813 GGACAGGTTAGTAACATGCTGAAG 59.368 45.833 23.75 3.68 46.37 3.02
5243 7381 0.322277 CATGCTGAAGTGCTGTCCCT 60.322 55.000 0.00 0.00 0.00 4.20
5251 7389 1.372501 AGTGCTGTCCCTTTACCCAT 58.627 50.000 0.00 0.00 0.00 4.00
5275 7413 3.380320 CCTAATGGGCCTTCCTTTTTACG 59.620 47.826 4.53 0.00 35.00 3.18
5277 7415 2.891191 TGGGCCTTCCTTTTTACGAT 57.109 45.000 4.53 0.00 36.20 3.73
5279 7417 2.224917 TGGGCCTTCCTTTTTACGATGT 60.225 45.455 4.53 0.00 36.20 3.06
5284 7422 3.689649 CCTTCCTTTTTACGATGTGGGAG 59.310 47.826 0.00 0.00 0.00 4.30
5300 7439 7.228507 CGATGTGGGAGAAACATTTCCATAATA 59.771 37.037 0.68 0.00 38.37 0.98
5304 7443 7.013369 GTGGGAGAAACATTTCCATAATAGACC 59.987 40.741 0.68 0.00 37.92 3.85
5307 7447 8.624776 GGAGAAACATTTCCATAATAGACCAAG 58.375 37.037 0.68 0.00 37.92 3.61
5312 7452 9.975218 AACATTTCCATAATAGACCAAGTAACT 57.025 29.630 0.00 0.00 0.00 2.24
5347 7487 3.834938 AGAAACAAACGGGAAATGGGTA 58.165 40.909 0.00 0.00 0.00 3.69
5351 7491 2.894765 ACAAACGGGAAATGGGTAAAGG 59.105 45.455 0.00 0.00 0.00 3.11
5365 7505 3.181452 GGGTAAAGGTGTGGTGTTCTGTA 60.181 47.826 0.00 0.00 0.00 2.74
5368 7508 3.418684 AAGGTGTGGTGTTCTGTATCC 57.581 47.619 0.00 0.00 0.00 2.59
5369 7509 2.334977 AGGTGTGGTGTTCTGTATCCA 58.665 47.619 0.00 0.00 0.00 3.41
5370 7510 2.912956 AGGTGTGGTGTTCTGTATCCAT 59.087 45.455 0.00 0.00 32.45 3.41
5379 7610 5.882557 GGTGTTCTGTATCCATCTGTTTGAT 59.117 40.000 0.00 0.00 35.40 2.57
5391 7622 2.815503 TCTGTTTGATGTGCAGACCATG 59.184 45.455 0.00 0.00 34.72 3.66
5393 7624 3.423749 TGTTTGATGTGCAGACCATGAT 58.576 40.909 0.00 0.00 30.90 2.45
5394 7625 3.827876 TGTTTGATGTGCAGACCATGATT 59.172 39.130 0.00 0.00 30.90 2.57
5450 7681 3.926616 TCCTCACCGATGTTTCTTTCTC 58.073 45.455 0.00 0.00 0.00 2.87
5451 7682 3.003480 CCTCACCGATGTTTCTTTCTCC 58.997 50.000 0.00 0.00 0.00 3.71
5685 7916 9.565213 CAAATAAAAGAAGCATCTTAGAACCTG 57.435 33.333 4.34 0.00 45.19 4.00
5694 7925 3.418684 TCTTAGAACCTGCAGGGAAAC 57.581 47.619 35.42 21.87 40.27 2.78
5804 8035 0.593128 ATCTTGCAGCGTTTGGTGTC 59.407 50.000 0.00 0.00 45.36 3.67
5906 8137 0.179100 ATGCAGTCGGAGAACCATCG 60.179 55.000 0.00 0.00 39.69 3.84
6114 8348 7.129109 AGTTAAATACACGGTTTGACATGAG 57.871 36.000 0.00 0.00 30.20 2.90
6146 8380 1.784062 CTGCTGCTTGAGTGTACGC 59.216 57.895 0.00 0.00 0.00 4.42
6168 8402 3.758554 CAGTGATTGGTTTTGGAGTAGGG 59.241 47.826 0.00 0.00 0.00 3.53
6179 8413 6.418946 GTTTTGGAGTAGGGAGAAATGAGAT 58.581 40.000 0.00 0.00 0.00 2.75
6199 8433 6.112927 AGATTTCCTGCTTCTATCCATCTC 57.887 41.667 0.00 0.00 0.00 2.75
6280 8515 6.954944 TCTGTTTGTTCCTTAAAATGAGACG 58.045 36.000 0.00 0.00 0.00 4.18
6281 8516 5.516090 TGTTTGTTCCTTAAAATGAGACGC 58.484 37.500 0.00 0.00 0.00 5.19
6303 8538 5.237996 CGCAAAAGGATGTGATAGTGATGAT 59.762 40.000 0.00 0.00 32.55 2.45
6327 8562 1.402968 CATGAACGAGGAAAGGCATGG 59.597 52.381 0.00 0.00 31.89 3.66
6358 8598 2.999331 GGCTAGTAATTGTGAAGCCCA 58.001 47.619 10.29 0.00 45.69 5.36
6359 8599 3.555966 GGCTAGTAATTGTGAAGCCCAT 58.444 45.455 10.29 0.00 45.69 4.00
6371 8611 1.815003 GAAGCCCATGTTCTTGACTGG 59.185 52.381 1.95 0.00 0.00 4.00
6416 9191 4.662650 CCCTCCCTTTCTATCCAAGAGATT 59.337 45.833 0.00 0.00 36.33 2.40
6428 9203 2.026449 CCAAGAGATTGAAGGGCAGAGT 60.026 50.000 0.00 0.00 0.00 3.24
6431 9206 3.683802 AGAGATTGAAGGGCAGAGTTTG 58.316 45.455 0.00 0.00 0.00 2.93
6435 9210 3.799281 TTGAAGGGCAGAGTTTGTTTG 57.201 42.857 0.00 0.00 0.00 2.93
6436 9211 2.031120 TGAAGGGCAGAGTTTGTTTGG 58.969 47.619 0.00 0.00 0.00 3.28
6437 9212 2.031870 GAAGGGCAGAGTTTGTTTGGT 58.968 47.619 0.00 0.00 0.00 3.67
6438 9213 2.159179 AGGGCAGAGTTTGTTTGGTT 57.841 45.000 0.00 0.00 0.00 3.67
6439 9214 2.466846 AGGGCAGAGTTTGTTTGGTTT 58.533 42.857 0.00 0.00 0.00 3.27
6440 9215 2.837591 AGGGCAGAGTTTGTTTGGTTTT 59.162 40.909 0.00 0.00 0.00 2.43
6441 9216 3.118775 AGGGCAGAGTTTGTTTGGTTTTC 60.119 43.478 0.00 0.00 0.00 2.29
6442 9217 2.857748 GGCAGAGTTTGTTTGGTTTTCG 59.142 45.455 0.00 0.00 0.00 3.46
6443 9218 3.507786 GCAGAGTTTGTTTGGTTTTCGT 58.492 40.909 0.00 0.00 0.00 3.85
6444 9219 3.924073 GCAGAGTTTGTTTGGTTTTCGTT 59.076 39.130 0.00 0.00 0.00 3.85
6445 9220 4.387559 GCAGAGTTTGTTTGGTTTTCGTTT 59.612 37.500 0.00 0.00 0.00 3.60
6446 9221 5.107259 GCAGAGTTTGTTTGGTTTTCGTTTT 60.107 36.000 0.00 0.00 0.00 2.43
6447 9222 6.565060 GCAGAGTTTGTTTGGTTTTCGTTTTT 60.565 34.615 0.00 0.00 0.00 1.94
6512 9294 5.961395 GCAAGTGCCTAATTGATTTGATG 57.039 39.130 0.00 0.00 33.94 3.07
6543 9325 7.039270 GTGTAGGAACAAGGTTCAAATTGTTT 58.961 34.615 10.86 0.00 46.67 2.83
6561 9343 2.004583 TTGTTCGTTAGGATGCCTCG 57.995 50.000 0.00 0.00 34.61 4.63
6598 9540 6.150976 CACTAAGTATGTTGCATCTTTTGGGA 59.849 38.462 0.00 0.00 0.00 4.37
6617 9559 4.335315 TGGGATCGATTTTACAATGAGTGC 59.665 41.667 0.00 0.00 0.00 4.40
6634 9588 1.626825 GTGCTAGTGGTTAGGGTGGAA 59.373 52.381 0.00 0.00 0.00 3.53
6636 9590 1.626825 GCTAGTGGTTAGGGTGGAACA 59.373 52.381 0.00 0.00 39.98 3.18
6652 9606 5.290885 GGTGGAACAAGTGAATTTGTGAAAC 59.709 40.000 0.00 0.00 44.16 2.78
6654 9608 4.502645 GGAACAAGTGAATTTGTGAAACCG 59.497 41.667 0.00 0.00 40.24 4.44
6671 9670 4.749245 AACCGCTTACAAAATCAGACTG 57.251 40.909 0.00 0.00 0.00 3.51
6676 9675 5.399301 CCGCTTACAAAATCAGACTGTTTTG 59.601 40.000 25.34 25.34 45.86 2.44
6685 9684 9.316859 CAAAATCAGACTGTTTTGTTTTTGTTC 57.683 29.630 22.09 0.00 39.34 3.18
6686 9685 8.831715 AAATCAGACTGTTTTGTTTTTGTTCT 57.168 26.923 10.10 0.00 0.00 3.01
6687 9686 8.831715 AATCAGACTGTTTTGTTTTTGTTCTT 57.168 26.923 1.59 0.00 0.00 2.52
6688 9687 8.831715 ATCAGACTGTTTTGTTTTTGTTCTTT 57.168 26.923 1.59 0.00 0.00 2.52
6689 9688 8.655651 TCAGACTGTTTTGTTTTTGTTCTTTT 57.344 26.923 1.59 0.00 0.00 2.27
6690 9689 9.103861 TCAGACTGTTTTGTTTTTGTTCTTTTT 57.896 25.926 1.59 0.00 0.00 1.94
6691 9690 9.157259 CAGACTGTTTTGTTTTTGTTCTTTTTG 57.843 29.630 0.00 0.00 0.00 2.44
6702 9701 8.637704 GTTTTTGTTCTTTTTGAAATGCAAAGG 58.362 29.630 0.00 0.00 46.38 3.11
6703 9702 7.446001 TTTGTTCTTTTTGAAATGCAAAGGT 57.554 28.000 0.00 0.00 46.38 3.50
6786 9793 5.237815 AGATGCACGTTCTTTTGTGAGATA 58.762 37.500 0.00 0.00 38.36 1.98
6790 9797 3.985279 CACGTTCTTTTGTGAGATACGGA 59.015 43.478 0.00 0.00 38.36 4.69
6809 9818 3.120546 CGGAAATAGCTGAATATGCACCG 60.121 47.826 0.00 0.00 0.00 4.94
6834 9843 6.538945 ACTCTTTAGAGGTTCCTCTGAATC 57.461 41.667 26.07 0.00 46.13 2.52
6842 9851 4.148838 AGGTTCCTCTGAATCTCGATAGG 58.851 47.826 0.00 0.00 37.37 2.57
6883 9892 2.678336 GACAGTAAGGTATGTGGCTTGC 59.322 50.000 0.00 0.00 0.00 4.01
6888 9897 2.112815 GGTATGTGGCTTGCGGACC 61.113 63.158 0.00 0.00 0.00 4.46
6909 9918 2.024414 GCCCAACGAGCCAATAATCTT 58.976 47.619 0.00 0.00 0.00 2.40
6912 9921 3.066760 CCCAACGAGCCAATAATCTTTCC 59.933 47.826 0.00 0.00 0.00 3.13
6914 9923 4.157656 CCAACGAGCCAATAATCTTTCCAA 59.842 41.667 0.00 0.00 0.00 3.53
6924 9933 8.860088 GCCAATAATCTTTCCAACATACCTAAT 58.140 33.333 0.00 0.00 0.00 1.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.280186 CTATCCGACGGCAAGGGC 60.280 66.667 9.66 0.00 40.13 5.19
16 17 1.755380 ACCAGTTGTAGCCTATCCGAC 59.245 52.381 0.00 0.00 0.00 4.79
33 34 1.614996 CCCATACTTGTGCACAACCA 58.385 50.000 27.96 18.10 0.00 3.67
35 36 0.243636 GCCCCATACTTGTGCACAAC 59.756 55.000 27.96 12.12 0.00 3.32
36 37 0.178978 TGCCCCATACTTGTGCACAA 60.179 50.000 29.36 29.36 0.00 3.33
38 39 0.609131 AGTGCCCCATACTTGTGCAC 60.609 55.000 10.75 10.75 44.11 4.57
64 65 4.641989 GGTGTCGATGTACTAAAGTAGGGA 59.358 45.833 0.00 0.00 0.00 4.20
139 140 5.816449 TGTATTCGTTGCATTCATCATGT 57.184 34.783 0.00 0.00 34.98 3.21
151 152 7.564128 ACATCGCACTAATTATGTATTCGTTG 58.436 34.615 0.00 0.00 30.99 4.10
168 169 8.900511 TCCGTAGTATATTTATTACATCGCAC 57.099 34.615 0.00 0.00 0.00 5.34
182 183 4.215827 CGAGACCAGCTTTCCGTAGTATAT 59.784 45.833 0.00 0.00 0.00 0.86
224 236 7.007099 GCGAATTCTATCGAACACGAAAATTTT 59.993 33.333 2.28 2.28 45.48 1.82
231 243 3.139603 TGCGAATTCTATCGAACACGA 57.860 42.857 3.52 0.00 45.48 4.35
242 254 7.307337 GGAAACATCAAAAACATTGCGAATTCT 60.307 33.333 3.52 0.00 0.00 2.40
310 322 3.049108 TCACCCGGAACATTATAGGGA 57.951 47.619 0.73 0.00 44.70 4.20
367 379 7.495606 TGGTATATCTTGTGCATACAGAAAGTG 59.504 37.037 0.00 0.00 38.23 3.16
377 389 4.137116 ACACGTGGTATATCTTGTGCAT 57.863 40.909 21.57 0.00 0.00 3.96
418 430 0.368907 CAAACGTTATCGCGTCCCTG 59.631 55.000 5.77 0.00 45.00 4.45
432 444 3.431912 TCGATGTGTCCTTTGATCAAACG 59.568 43.478 16.91 15.22 0.00 3.60
453 465 7.268872 CCAACAATTTTGCTTGCGATTTTTATC 59.731 33.333 0.00 0.00 0.00 1.75
477 1568 3.559597 CCCTCACCGTTTTATTACCACCA 60.560 47.826 0.00 0.00 0.00 4.17
482 1573 6.128200 ACGATTTTCCCTCACCGTTTTATTAC 60.128 38.462 0.00 0.00 0.00 1.89
515 1612 3.005791 ACTTTGGAACACATAGCTTTGGC 59.994 43.478 9.08 0.00 39.29 4.52
570 1668 4.083862 GGGACTCGAGTGGCCACC 62.084 72.222 32.29 21.53 0.00 4.61
599 1701 0.030101 TGCGTGCTGTGTTAAAAGGC 59.970 50.000 0.00 0.00 0.00 4.35
602 1704 1.740585 AGTGTGCGTGCTGTGTTAAAA 59.259 42.857 0.00 0.00 0.00 1.52
628 1733 1.518903 GCCCACTTGTCAGCTGGAAC 61.519 60.000 15.13 6.21 0.00 3.62
629 1734 1.228245 GCCCACTTGTCAGCTGGAA 60.228 57.895 15.13 6.40 0.00 3.53
632 1737 1.303888 ATGGCCCACTTGTCAGCTG 60.304 57.895 7.63 7.63 0.00 4.24
649 1754 4.722700 GGCCTGTGGTGTCGGCAT 62.723 66.667 0.00 0.00 45.53 4.40
653 1758 3.551496 ATGTGGGCCTGTGGTGTCG 62.551 63.158 4.53 0.00 0.00 4.35
654 1759 1.973281 CATGTGGGCCTGTGGTGTC 60.973 63.158 4.53 0.00 0.00 3.67
657 1762 2.416107 CTGACATGTGGGCCTGTGGT 62.416 60.000 1.15 0.00 0.00 4.16
661 1766 2.753043 GGCTGACATGTGGGCCTG 60.753 66.667 23.61 7.78 41.20 4.85
679 1784 5.377478 GACGGGATAATGGAAAGGAAATCT 58.623 41.667 0.00 0.00 0.00 2.40
681 1786 4.134563 CGACGGGATAATGGAAAGGAAAT 58.865 43.478 0.00 0.00 0.00 2.17
682 1787 3.198200 TCGACGGGATAATGGAAAGGAAA 59.802 43.478 0.00 0.00 0.00 3.13
683 1788 2.767394 TCGACGGGATAATGGAAAGGAA 59.233 45.455 0.00 0.00 0.00 3.36
684 1789 2.390696 TCGACGGGATAATGGAAAGGA 58.609 47.619 0.00 0.00 0.00 3.36
686 1791 5.294356 TGTAATCGACGGGATAATGGAAAG 58.706 41.667 0.00 0.00 34.08 2.62
687 1792 5.279255 TGTAATCGACGGGATAATGGAAA 57.721 39.130 0.00 0.00 34.08 3.13
692 1797 4.921515 CGTGAATGTAATCGACGGGATAAT 59.078 41.667 0.00 0.00 34.08 1.28
693 1798 4.292599 CGTGAATGTAATCGACGGGATAA 58.707 43.478 0.00 0.00 34.08 1.75
695 1800 2.739292 CGTGAATGTAATCGACGGGAT 58.261 47.619 0.00 0.00 36.78 3.85
775 1880 3.668447 CGAATGGTATGATTCTGAGGGG 58.332 50.000 0.00 0.00 31.19 4.79
782 1887 3.206150 ACAGGTGCGAATGGTATGATTC 58.794 45.455 0.00 0.00 0.00 2.52
784 1889 2.485479 GGACAGGTGCGAATGGTATGAT 60.485 50.000 0.00 0.00 0.00 2.45
788 1893 1.600107 GGGACAGGTGCGAATGGTA 59.400 57.895 0.00 0.00 0.00 3.25
791 1896 1.002134 AAGGGGACAGGTGCGAATG 60.002 57.895 0.00 0.00 0.00 2.67
799 1904 1.614824 AGAGGAGCAAGGGGACAGG 60.615 63.158 0.00 0.00 0.00 4.00
803 1908 0.253347 AATGGAGAGGAGCAAGGGGA 60.253 55.000 0.00 0.00 0.00 4.81
808 1914 1.600058 ATGGGAATGGAGAGGAGCAA 58.400 50.000 0.00 0.00 0.00 3.91
826 1932 1.836999 TTGCGGCACTGGGTCTGTAT 61.837 55.000 0.05 0.00 0.00 2.29
829 1935 3.357079 GTTGCGGCACTGGGTCTG 61.357 66.667 0.05 0.00 0.00 3.51
832 1938 2.741486 ATTACGTTGCGGCACTGGGT 62.741 55.000 0.05 0.73 0.00 4.51
843 1949 6.347402 CCTTGAGGTGTACTGAAATTACGTTG 60.347 42.308 0.00 0.00 0.00 4.10
864 1970 4.351874 TGTTCTACTCCTTTGGTCCTTG 57.648 45.455 0.00 0.00 0.00 3.61
875 1981 5.358160 CCCAATTGAGGAAATGTTCTACTCC 59.642 44.000 7.12 0.00 0.00 3.85
877 1983 5.015178 TCCCCAATTGAGGAAATGTTCTACT 59.985 40.000 6.17 0.00 0.00 2.57
884 1990 8.048514 ACAATTTAATCCCCAATTGAGGAAATG 58.951 33.333 13.23 8.24 41.18 2.32
1035 2357 2.202987 GAGCTCATCGTGGCCCTG 60.203 66.667 9.40 0.00 0.00 4.45
1407 2731 0.392998 GCCATTTTCCAGAGAGCCGA 60.393 55.000 0.00 0.00 0.00 5.54
1415 2739 1.312815 GGGATCTCGCCATTTTCCAG 58.687 55.000 0.00 0.00 0.00 3.86
1417 2741 0.463833 ACGGGATCTCGCCATTTTCC 60.464 55.000 16.63 0.00 0.00 3.13
1426 2755 3.257561 CAGCGCAACGGGATCTCG 61.258 66.667 14.88 14.88 0.00 4.04
1444 2773 2.369860 TGCCAACTCTGACTGAATCTGT 59.630 45.455 0.00 0.00 0.00 3.41
1473 2803 9.355215 ACACTACAAAATCGTACTCTAGATTTG 57.645 33.333 9.95 9.95 43.72 2.32
1479 2809 8.239314 CCTAACACACTACAAAATCGTACTCTA 58.761 37.037 0.00 0.00 0.00 2.43
1480 2810 7.088905 CCTAACACACTACAAAATCGTACTCT 58.911 38.462 0.00 0.00 0.00 3.24
1481 2811 6.865205 ACCTAACACACTACAAAATCGTACTC 59.135 38.462 0.00 0.00 0.00 2.59
1482 2812 6.752168 ACCTAACACACTACAAAATCGTACT 58.248 36.000 0.00 0.00 0.00 2.73
1483 2813 7.412137 AACCTAACACACTACAAAATCGTAC 57.588 36.000 0.00 0.00 0.00 3.67
1500 2830 7.933215 AACCCACATACAAATCTAACCTAAC 57.067 36.000 0.00 0.00 0.00 2.34
1520 2850 7.176690 TCCAATGAGAACAAATTCTTCTAACCC 59.823 37.037 0.00 0.00 45.60 4.11
1565 2895 5.048921 CAGAAATGATGTGTTGACAAGCTCT 60.049 40.000 0.00 0.00 35.11 4.09
1579 2909 4.059511 CTCTAGCAGGAGCAGAAATGATG 58.940 47.826 0.00 0.00 45.49 3.07
1582 2912 3.132646 AGTCTCTAGCAGGAGCAGAAATG 59.867 47.826 1.71 0.00 45.49 2.32
1590 2920 2.364002 GCCCTTTAGTCTCTAGCAGGAG 59.636 54.545 0.29 0.29 34.88 3.69
1591 2921 2.023888 AGCCCTTTAGTCTCTAGCAGGA 60.024 50.000 0.00 0.00 0.00 3.86
1592 2922 2.102252 CAGCCCTTTAGTCTCTAGCAGG 59.898 54.545 0.00 0.00 0.00 4.85
1632 2965 8.035394 CAGAGATTAAAAAGTCTACAGGTGCTA 58.965 37.037 0.00 0.00 0.00 3.49
1679 3013 7.121168 CCAGGTCAGAAAGCATTCTACATTTAA 59.879 37.037 3.48 0.00 44.11 1.52
1782 3143 5.536161 ACAACTAATGGTCTCAAACAAGCAT 59.464 36.000 0.00 0.00 35.24 3.79
1833 3198 3.064271 GCATAATGTTTGCATTGCTTGGG 59.936 43.478 10.49 0.00 44.32 4.12
1878 3245 6.606395 AGATTCATATCCTTTTGCAGCTCTTT 59.394 34.615 0.00 0.00 0.00 2.52
1950 3321 5.952347 TCCCAAAAGATAGGAAGGTCTAC 57.048 43.478 0.00 0.00 0.00 2.59
2179 3550 6.350445 GGTCTGTGTATAACGAGAAAGGGTTA 60.350 42.308 0.00 0.00 33.56 2.85
2242 3613 1.417517 CATATGGGAGTGCTGTAGCCA 59.582 52.381 0.80 0.00 41.18 4.75
2293 3664 3.743521 TGCTACATAAATAGGGCTGCAG 58.256 45.455 10.11 10.11 0.00 4.41
2294 3665 3.743521 CTGCTACATAAATAGGGCTGCA 58.256 45.455 0.50 0.00 0.00 4.41
2295 3666 2.485814 GCTGCTACATAAATAGGGCTGC 59.514 50.000 0.00 0.00 37.44 5.25
2296 3667 4.013267 AGCTGCTACATAAATAGGGCTG 57.987 45.455 0.00 0.00 0.00 4.85
2297 3668 4.392940 CAAGCTGCTACATAAATAGGGCT 58.607 43.478 0.90 0.00 0.00 5.19
2298 3669 3.503748 CCAAGCTGCTACATAAATAGGGC 59.496 47.826 0.90 0.00 0.00 5.19
2299 3670 4.516698 CACCAAGCTGCTACATAAATAGGG 59.483 45.833 0.90 0.00 0.00 3.53
2300 3671 4.023707 GCACCAAGCTGCTACATAAATAGG 60.024 45.833 0.90 0.00 41.15 2.57
2301 3672 5.100751 GCACCAAGCTGCTACATAAATAG 57.899 43.478 0.90 0.00 41.15 1.73
2315 3686 0.242017 GGACAACATCAGCACCAAGC 59.758 55.000 0.00 0.00 46.19 4.01
2316 3687 0.883833 GGGACAACATCAGCACCAAG 59.116 55.000 0.00 0.00 0.00 3.61
2317 3688 0.478072 AGGGACAACATCAGCACCAA 59.522 50.000 0.00 0.00 0.00 3.67
2318 3689 0.478072 AAGGGACAACATCAGCACCA 59.522 50.000 0.00 0.00 0.00 4.17
2319 3690 2.359900 CTAAGGGACAACATCAGCACC 58.640 52.381 0.00 0.00 0.00 5.01
2320 3691 2.359900 CCTAAGGGACAACATCAGCAC 58.640 52.381 0.00 0.00 33.58 4.40
2321 3692 2.787473 CCTAAGGGACAACATCAGCA 57.213 50.000 0.00 0.00 33.58 4.41
2335 3706 3.636764 ACAACAGAAAGCCAAACCCTAAG 59.363 43.478 0.00 0.00 0.00 2.18
2346 3717 7.659652 ACTGATACTCTTTACAACAGAAAGC 57.340 36.000 0.00 0.00 34.51 3.51
2439 3845 4.081476 GCAGGGGACATTTTCTTGCTTAAT 60.081 41.667 0.00 0.00 0.00 1.40
2440 3846 3.258123 GCAGGGGACATTTTCTTGCTTAA 59.742 43.478 0.00 0.00 0.00 1.85
2464 3870 9.710900 AAACCATTTCAAAAATCCTATCTGAAC 57.289 29.630 0.00 0.00 0.00 3.18
2493 3899 0.627451 AATCTGCCTCAGCCCATTCA 59.373 50.000 0.00 0.00 38.69 2.57
2543 3951 6.019779 TGCAAGTTTGTATAACCAATCCAC 57.980 37.500 0.00 0.00 0.00 4.02
2626 4034 3.207265 AGTTTGCATGTGTACACCTGA 57.793 42.857 28.72 14.59 0.00 3.86
2781 4189 2.253452 GCAGAACGCTGGCACAAG 59.747 61.111 0.00 0.00 42.53 3.16
2789 4197 0.322975 AGGAGATTGTGCAGAACGCT 59.677 50.000 0.00 0.00 43.06 5.07
3089 4497 4.713553 TGTCTGCCAACAAGAGATAAACA 58.286 39.130 0.00 0.00 0.00 2.83
3125 4533 2.827642 GGGCTGATCCTGTGCTGC 60.828 66.667 0.00 0.00 34.39 5.25
3222 4630 4.935205 CCAGAGACAAATTAACATCGGACA 59.065 41.667 0.00 0.00 0.00 4.02
3226 4634 4.393062 AGCACCAGAGACAAATTAACATCG 59.607 41.667 0.00 0.00 0.00 3.84
3250 4659 4.019591 GGGAGTACAAGGCTAAAGAAAGGA 60.020 45.833 0.00 0.00 0.00 3.36
3276 4685 2.091588 CCACGACGAGTAATTTGGAACG 59.908 50.000 0.00 0.00 0.00 3.95
3279 4688 3.389925 AACCACGACGAGTAATTTGGA 57.610 42.857 0.00 0.00 0.00 3.53
3280 4689 4.477302 AAAACCACGACGAGTAATTTGG 57.523 40.909 0.00 0.00 0.00 3.28
3281 4690 6.219302 ACTAAAACCACGACGAGTAATTTG 57.781 37.500 0.00 2.39 0.00 2.32
3282 4691 6.479660 TGAACTAAAACCACGACGAGTAATTT 59.520 34.615 0.00 0.34 0.00 1.82
3285 4694 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
3288 4697 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
3289 4698 5.738118 AATTTGAACTAAAACCACGACGA 57.262 34.783 0.00 0.00 0.00 4.20
3290 4699 5.966503 TCAAATTTGAACTAAAACCACGACG 59.033 36.000 18.45 0.00 33.55 5.12
3304 4713 6.469595 CGTCGTGGTTTTAGTTCAAATTTGAA 59.530 34.615 26.01 26.01 44.31 2.69
3305 4714 5.966503 CGTCGTGGTTTTAGTTCAAATTTGA 59.033 36.000 16.91 16.91 34.92 2.69
3306 4715 5.966503 TCGTCGTGGTTTTAGTTCAAATTTG 59.033 36.000 12.15 12.15 0.00 2.32
3308 4717 5.295045 ACTCGTCGTGGTTTTAGTTCAAATT 59.705 36.000 0.00 0.00 0.00 1.82
3309 4718 4.812626 ACTCGTCGTGGTTTTAGTTCAAAT 59.187 37.500 0.00 0.00 0.00 2.32
3312 4721 3.441496 ACTCGTCGTGGTTTTAGTTCA 57.559 42.857 0.00 0.00 0.00 3.18
3314 4723 6.849588 AAATTACTCGTCGTGGTTTTAGTT 57.150 33.333 0.00 0.00 0.00 2.24
3315 4724 6.479660 TCAAAATTACTCGTCGTGGTTTTAGT 59.520 34.615 0.00 0.00 0.00 2.24
3316 4725 6.879962 TCAAAATTACTCGTCGTGGTTTTAG 58.120 36.000 0.00 0.00 0.00 1.85
3318 4727 5.738118 TCAAAATTACTCGTCGTGGTTTT 57.262 34.783 0.00 1.53 0.00 2.43
3319 4728 5.295045 AGTTCAAAATTACTCGTCGTGGTTT 59.705 36.000 0.00 0.00 0.00 3.27
3321 4730 4.374399 AGTTCAAAATTACTCGTCGTGGT 58.626 39.130 0.00 0.00 0.00 4.16
3322 4731 4.985044 AGTTCAAAATTACTCGTCGTGG 57.015 40.909 0.00 0.00 0.00 4.94
3324 4733 7.011295 TGGTTTTAGTTCAAAATTACTCGTCGT 59.989 33.333 0.00 0.00 38.36 4.34
3326 4735 7.319615 CGTGGTTTTAGTTCAAAATTACTCGTC 59.680 37.037 0.00 0.00 38.36 4.20
3327 4736 7.011295 TCGTGGTTTTAGTTCAAAATTACTCGT 59.989 33.333 0.00 0.00 38.36 4.18
3328 4737 7.319615 GTCGTGGTTTTAGTTCAAAATTACTCG 59.680 37.037 0.00 0.00 38.36 4.18
3329 4738 7.319615 CGTCGTGGTTTTAGTTCAAAATTACTC 59.680 37.037 0.00 0.00 38.36 2.59
3331 4740 7.125113 TCGTCGTGGTTTTAGTTCAAAATTAC 58.875 34.615 0.00 0.00 38.36 1.89
3332 4741 7.011295 ACTCGTCGTGGTTTTAGTTCAAAATTA 59.989 33.333 0.00 0.00 38.36 1.40
3333 4742 6.121613 TCGTCGTGGTTTTAGTTCAAAATT 57.878 33.333 0.00 0.00 38.36 1.82
3334 4743 5.295045 ACTCGTCGTGGTTTTAGTTCAAAAT 59.705 36.000 0.00 0.00 38.36 1.82
3336 4745 4.183101 ACTCGTCGTGGTTTTAGTTCAAA 58.817 39.130 0.00 0.00 0.00 2.69
3339 4748 6.457851 AATTACTCGTCGTGGTTTTAGTTC 57.542 37.500 0.00 0.00 0.00 3.01
3341 4750 5.178067 CCAAATTACTCGTCGTGGTTTTAGT 59.822 40.000 0.00 0.00 0.00 2.24
3342 4751 5.406175 TCCAAATTACTCGTCGTGGTTTTAG 59.594 40.000 0.00 0.00 0.00 1.85
3343 4752 5.295950 TCCAAATTACTCGTCGTGGTTTTA 58.704 37.500 0.00 0.00 0.00 1.52
3345 4754 3.731089 TCCAAATTACTCGTCGTGGTTT 58.269 40.909 0.00 0.00 0.00 3.27
3346 4755 3.389925 TCCAAATTACTCGTCGTGGTT 57.610 42.857 0.00 0.00 0.00 3.67
3348 4757 2.414138 GGTTCCAAATTACTCGTCGTGG 59.586 50.000 0.00 0.00 0.00 4.94
3349 4758 2.091588 CGGTTCCAAATTACTCGTCGTG 59.908 50.000 0.00 0.00 0.00 4.35
3350 4759 2.331194 CGGTTCCAAATTACTCGTCGT 58.669 47.619 0.00 0.00 0.00 4.34
3351 4760 1.060122 GCGGTTCCAAATTACTCGTCG 59.940 52.381 0.00 0.00 0.00 5.12
3352 4761 1.060122 CGCGGTTCCAAATTACTCGTC 59.940 52.381 0.00 0.00 0.00 4.20
3353 4762 1.073177 CGCGGTTCCAAATTACTCGT 58.927 50.000 0.00 0.00 0.00 4.18
3354 4763 0.372334 CCGCGGTTCCAAATTACTCG 59.628 55.000 19.50 0.00 0.00 4.18
3356 4765 0.325602 TCCCGCGGTTCCAAATTACT 59.674 50.000 26.12 0.00 0.00 2.24
3357 4766 0.730840 CTCCCGCGGTTCCAAATTAC 59.269 55.000 26.12 0.00 0.00 1.89
3358 4767 0.325602 ACTCCCGCGGTTCCAAATTA 59.674 50.000 26.12 0.00 0.00 1.40
3360 4769 0.544697 ATACTCCCGCGGTTCCAAAT 59.455 50.000 26.12 6.76 0.00 2.32
3361 4770 0.391927 CATACTCCCGCGGTTCCAAA 60.392 55.000 26.12 4.38 0.00 3.28
3362 4771 1.219664 CATACTCCCGCGGTTCCAA 59.780 57.895 26.12 5.59 0.00 3.53
3364 4773 0.392060 AAACATACTCCCGCGGTTCC 60.392 55.000 26.12 0.00 0.00 3.62
3365 4774 1.445871 AAAACATACTCCCGCGGTTC 58.554 50.000 26.12 0.00 0.00 3.62
3367 4776 1.826720 TCTAAAACATACTCCCGCGGT 59.173 47.619 26.12 8.42 0.00 5.68
3368 4777 2.159142 ACTCTAAAACATACTCCCGCGG 60.159 50.000 21.04 21.04 0.00 6.46
3369 4778 3.114065 GACTCTAAAACATACTCCCGCG 58.886 50.000 0.00 0.00 0.00 6.46
3370 4779 3.114065 CGACTCTAAAACATACTCCCGC 58.886 50.000 0.00 0.00 0.00 6.13
3371 4780 3.114065 GCGACTCTAAAACATACTCCCG 58.886 50.000 0.00 0.00 0.00 5.14
3372 4781 4.113354 CTGCGACTCTAAAACATACTCCC 58.887 47.826 0.00 0.00 0.00 4.30
3375 4784 4.389077 GCAACTGCGACTCTAAAACATACT 59.611 41.667 0.00 0.00 0.00 2.12
3376 4785 4.435651 GGCAACTGCGACTCTAAAACATAC 60.436 45.833 0.00 0.00 43.26 2.39
3378 4787 2.484264 GGCAACTGCGACTCTAAAACAT 59.516 45.455 0.00 0.00 43.26 2.71
3390 4920 3.119531 TGGAAAGAAATATGGCAACTGCG 60.120 43.478 0.00 0.00 43.26 5.18
3411 4941 6.485313 TGGGTGTGTAGAAAGTACTTCAAATG 59.515 38.462 8.95 0.00 36.40 2.32
3419 4949 7.974482 AGTAAAATGGGTGTGTAGAAAGTAC 57.026 36.000 0.00 0.00 0.00 2.73
3426 4956 7.598278 TGCAAATAAGTAAAATGGGTGTGTAG 58.402 34.615 0.00 0.00 0.00 2.74
3463 4994 3.955771 TGTTTCGTCAACTAACTTGCC 57.044 42.857 2.66 0.00 36.21 4.52
3472 5003 6.316319 TGGTAAAGTTCTTTGTTTCGTCAAC 58.684 36.000 7.90 0.00 35.71 3.18
3483 5014 6.976934 ACAACATCCATGGTAAAGTTCTTT 57.023 33.333 12.58 3.33 0.00 2.52
3500 5031 9.747898 TGTTAATTATGGTCTTTAGGACAACAT 57.252 29.630 0.00 0.00 46.16 2.71
3501 5032 9.226606 CTGTTAATTATGGTCTTTAGGACAACA 57.773 33.333 0.00 0.00 46.16 3.33
3541 5073 6.206829 AGGACCTAATACTGCAAACTGAAAAC 59.793 38.462 0.00 0.00 0.00 2.43
3561 5094 7.085052 AGCGATTTTCTTGTTTATAAGGACC 57.915 36.000 0.00 0.00 0.00 4.46
3610 5143 3.782992 GGATGGGATTGGGCTTTATGAT 58.217 45.455 0.00 0.00 0.00 2.45
3611 5144 2.488891 CGGATGGGATTGGGCTTTATGA 60.489 50.000 0.00 0.00 0.00 2.15
3632 5172 4.877823 TGAGGTCAGCATTGTATGATTCAC 59.122 41.667 0.00 0.00 0.00 3.18
3641 5181 3.181451 TGAGAGTTTGAGGTCAGCATTGT 60.181 43.478 0.00 0.00 0.00 2.71
3648 5188 3.384789 CGGGATATGAGAGTTTGAGGTCA 59.615 47.826 0.00 0.00 0.00 4.02
3653 5193 3.181479 CGGTTCGGGATATGAGAGTTTGA 60.181 47.826 0.00 0.00 0.00 2.69
3657 5197 0.674534 GCGGTTCGGGATATGAGAGT 59.325 55.000 0.00 0.00 0.00 3.24
3669 5209 2.750888 GCCTTAAGCCAGCGGTTCG 61.751 63.158 0.00 0.00 34.35 3.95
3681 5221 0.787084 TGGGTTGGATTGGGCCTTAA 59.213 50.000 4.53 0.00 0.00 1.85
3708 5251 5.046735 TGGTTTGGGAATGTGAATGTTATGG 60.047 40.000 0.00 0.00 0.00 2.74
3713 5256 3.070878 GGTTGGTTTGGGAATGTGAATGT 59.929 43.478 0.00 0.00 0.00 2.71
3743 5286 2.808567 GCAACTAGGGCTAGATTCCTGC 60.809 54.545 9.20 3.00 36.97 4.85
3767 5310 3.906660 CGTAAGGGCAGAGACAACA 57.093 52.632 0.00 0.00 0.00 3.33
3783 5326 3.507009 GTAGACGAGCGCCTCCGT 61.507 66.667 17.76 17.76 42.17 4.69
3797 5340 1.410882 GTGCCAGAGCTAGGAAGGTAG 59.589 57.143 8.81 0.00 40.80 3.18
3798 5341 1.273041 TGTGCCAGAGCTAGGAAGGTA 60.273 52.381 8.81 0.00 40.80 3.08
3805 5348 3.931468 GTGCATATATGTGCCAGAGCTAG 59.069 47.826 20.22 0.00 44.43 3.42
3826 5369 1.626356 ATGGACGCCACTATGCTGGT 61.626 55.000 0.50 0.00 35.80 4.00
3848 5393 1.003233 GCACCAGGGTCAAGGAGAC 60.003 63.158 0.00 0.00 46.83 3.36
3856 5401 2.607750 TGGAGGAGCACCAGGGTC 60.608 66.667 2.07 0.00 43.35 4.46
3896 5441 2.948979 CACAAACACAAAGGCCTAGTGA 59.051 45.455 33.12 0.00 37.05 3.41
3959 5506 2.854963 TCAGCTGCTTTCACAATCAGT 58.145 42.857 9.47 0.00 0.00 3.41
3960 5507 3.252701 AGTTCAGCTGCTTTCACAATCAG 59.747 43.478 9.47 0.00 0.00 2.90
3961 5508 3.004002 CAGTTCAGCTGCTTTCACAATCA 59.996 43.478 9.47 0.00 38.52 2.57
3962 5509 3.562505 CAGTTCAGCTGCTTTCACAATC 58.437 45.455 9.47 0.00 38.52 2.67
3995 5542 8.968242 GTTTTTGGTTAAGCAACTAATTCAGAG 58.032 33.333 19.19 0.00 35.37 3.35
3997 5544 8.755018 CAGTTTTTGGTTAAGCAACTAATTCAG 58.245 33.333 19.19 2.51 35.37 3.02
4016 5563 8.942338 TTATATAGTCGCAGTCATCAGTTTTT 57.058 30.769 0.00 0.00 0.00 1.94
4058 5608 8.704668 ACAAACCAAAATAAAAGAGGAGACAAT 58.295 29.630 0.00 0.00 0.00 2.71
4059 5609 8.073467 ACAAACCAAAATAAAAGAGGAGACAA 57.927 30.769 0.00 0.00 0.00 3.18
4073 5623 7.823799 CCCATAGAAATAGCAACAAACCAAAAT 59.176 33.333 0.00 0.00 0.00 1.82
4075 5625 6.696411 CCCATAGAAATAGCAACAAACCAAA 58.304 36.000 0.00 0.00 0.00 3.28
4105 5670 7.541916 AGTAAAGCTTACTCTGGTTTCTACT 57.458 36.000 0.00 0.00 36.65 2.57
4106 5671 9.702494 TTTAGTAAAGCTTACTCTGGTTTCTAC 57.298 33.333 0.00 0.00 36.65 2.59
4145 5718 3.609853 GACAACAATGCAGTAGGGATGA 58.390 45.455 0.00 0.00 0.00 2.92
4161 5734 1.963515 AGTTTTCAGGCCATGGACAAC 59.036 47.619 22.78 15.46 0.00 3.32
4164 5737 2.488153 GTGTAGTTTTCAGGCCATGGAC 59.512 50.000 18.40 14.73 0.00 4.02
4220 5794 2.216898 GGCCAAAGCTACATCTGCTAG 58.783 52.381 0.00 0.00 40.22 3.42
4256 5830 1.067071 GTACTCGTGAACTCCCAAGGG 60.067 57.143 0.00 0.00 0.00 3.95
4261 5835 3.429135 GGATTGAGTACTCGTGAACTCCC 60.429 52.174 17.85 6.72 41.19 4.30
4262 5836 3.444388 AGGATTGAGTACTCGTGAACTCC 59.556 47.826 17.85 12.52 41.19 3.85
4303 5878 6.656693 ACACCTGCCATTTCAGATATATAAGC 59.343 38.462 0.00 0.00 36.19 3.09
4313 5888 4.853924 AAACTTACACCTGCCATTTCAG 57.146 40.909 0.00 0.00 0.00 3.02
4398 5973 9.926751 CAGTGTTACTTGCATATATTTTCAGAG 57.073 33.333 0.00 0.00 0.00 3.35
4400 5975 8.400947 AGCAGTGTTACTTGCATATATTTTCAG 58.599 33.333 13.01 0.00 0.00 3.02
4409 5984 4.001618 TGTGAGCAGTGTTACTTGCATA 57.998 40.909 13.01 1.58 0.00 3.14
4410 5985 2.849942 TGTGAGCAGTGTTACTTGCAT 58.150 42.857 13.01 1.46 0.00 3.96
4411 5986 2.323968 TGTGAGCAGTGTTACTTGCA 57.676 45.000 13.01 0.00 0.00 4.08
4412 5987 2.031682 CCTTGTGAGCAGTGTTACTTGC 60.032 50.000 4.70 4.70 0.00 4.01
4414 5989 3.118408 TGACCTTGTGAGCAGTGTTACTT 60.118 43.478 0.00 0.00 0.00 2.24
4415 5990 2.434336 TGACCTTGTGAGCAGTGTTACT 59.566 45.455 0.00 0.00 0.00 2.24
4416 5991 2.544267 GTGACCTTGTGAGCAGTGTTAC 59.456 50.000 0.00 0.00 0.00 2.50
4417 5992 2.169561 TGTGACCTTGTGAGCAGTGTTA 59.830 45.455 0.00 0.00 0.00 2.41
4431 6083 0.850100 TTGGAACATGGGTGTGACCT 59.150 50.000 0.00 0.00 39.30 3.85
4454 6106 5.399052 ACTGGCCATACTAGTCCTAACTA 57.601 43.478 5.51 0.00 34.47 2.24
4484 6136 4.941657 AGTACTAAACTACGCCCTAATGC 58.058 43.478 0.00 0.00 36.36 3.56
4562 6214 7.892609 TGTAGAAAACTGTCATGCTCTAGTAA 58.107 34.615 0.00 0.00 0.00 2.24
4640 6292 6.250344 TCTGAAGTCGTCCGGTATATATTG 57.750 41.667 0.00 0.00 0.00 1.90
4661 6313 6.665680 TGTAGTCAAAAGATTCTAGAGCCTCT 59.334 38.462 0.00 0.00 0.00 3.69
4779 6431 6.486657 TCTGAAGGATAGGAAATTTATTGGCG 59.513 38.462 0.00 0.00 0.00 5.69
4808 6460 9.630098 AATGAGCACAAGTTCACAAAATATTAG 57.370 29.630 0.00 0.00 37.82 1.73
4814 6466 5.070770 ACAATGAGCACAAGTTCACAAAA 57.929 34.783 0.00 0.00 37.82 2.44
4840 6501 6.565234 ACATCGTTCTCTATGTAAACCTCAG 58.435 40.000 0.00 0.00 34.61 3.35
4899 6636 9.069082 AGAGAACTGTAATACGACTATAAGCAT 57.931 33.333 0.00 0.00 0.00 3.79
4901 6638 9.733219 AAAGAGAACTGTAATACGACTATAAGC 57.267 33.333 0.00 0.00 0.00 3.09
4905 6642 8.407064 CAGGAAAGAGAACTGTAATACGACTAT 58.593 37.037 0.00 0.00 0.00 2.12
4908 6645 6.388278 ACAGGAAAGAGAACTGTAATACGAC 58.612 40.000 0.00 0.00 43.13 4.34
4924 6661 8.553459 TCTGCTAAGAATAAGAAACAGGAAAG 57.447 34.615 0.00 0.00 0.00 2.62
4928 6665 9.995003 ATAGATCTGCTAAGAATAAGAAACAGG 57.005 33.333 5.18 0.00 35.59 4.00
4939 6676 7.012704 GGCATTGTTTCATAGATCTGCTAAGAA 59.987 37.037 5.18 0.00 35.61 2.52
4940 6677 6.484643 GGCATTGTTTCATAGATCTGCTAAGA 59.515 38.462 5.18 0.00 36.69 2.10
4941 6678 6.261603 TGGCATTGTTTCATAGATCTGCTAAG 59.738 38.462 5.18 0.00 31.66 2.18
4942 6679 6.121590 TGGCATTGTTTCATAGATCTGCTAA 58.878 36.000 5.18 0.00 31.66 3.09
4943 6680 5.683681 TGGCATTGTTTCATAGATCTGCTA 58.316 37.500 5.18 0.00 0.00 3.49
4944 6681 4.529897 TGGCATTGTTTCATAGATCTGCT 58.470 39.130 5.18 0.00 0.00 4.24
4945 6682 4.337555 ACTGGCATTGTTTCATAGATCTGC 59.662 41.667 5.18 0.00 0.00 4.26
4946 6683 7.741027 ATACTGGCATTGTTTCATAGATCTG 57.259 36.000 5.18 0.00 0.00 2.90
4948 6685 6.860023 GCAATACTGGCATTGTTTCATAGATC 59.140 38.462 1.70 0.00 38.04 2.75
4949 6686 6.321945 TGCAATACTGGCATTGTTTCATAGAT 59.678 34.615 1.70 0.00 38.04 1.98
4950 6687 5.651576 TGCAATACTGGCATTGTTTCATAGA 59.348 36.000 1.70 0.00 38.04 1.98
4951 6688 5.893687 TGCAATACTGGCATTGTTTCATAG 58.106 37.500 1.70 0.00 38.04 2.23
4964 6710 5.047802 ACCAAAAGAACTCATGCAATACTGG 60.048 40.000 0.00 0.00 0.00 4.00
4965 6711 6.017400 ACCAAAAGAACTCATGCAATACTG 57.983 37.500 0.00 0.00 0.00 2.74
4993 6739 8.604640 TGGTAGTTGAATGATACGTAACAAAA 57.395 30.769 9.74 2.80 0.00 2.44
5040 7174 8.404000 AAAATCACATTTTACAAGCATTGCAAA 58.596 25.926 11.91 2.52 41.44 3.68
5078 7212 0.948678 GCGCAACTTACCTTCCACAA 59.051 50.000 0.30 0.00 0.00 3.33
5091 7225 2.118228 TGTCTCATGTTTTGCGCAAC 57.882 45.000 24.99 14.42 0.00 4.17
5093 7227 2.859526 TTTGTCTCATGTTTTGCGCA 57.140 40.000 5.66 5.66 0.00 6.09
5095 7229 4.739228 TGTGAATTTGTCTCATGTTTTGCG 59.261 37.500 0.00 0.00 0.00 4.85
5096 7230 6.586868 TTGTGAATTTGTCTCATGTTTTGC 57.413 33.333 0.00 0.00 30.10 3.68
5107 7241 9.438291 CGGAATCATAGTATTTGTGAATTTGTC 57.562 33.333 0.00 0.00 0.00 3.18
5108 7242 8.956426 ACGGAATCATAGTATTTGTGAATTTGT 58.044 29.630 0.00 0.00 0.00 2.83
5109 7243 9.225201 CACGGAATCATAGTATTTGTGAATTTG 57.775 33.333 0.00 0.00 31.99 2.32
5110 7244 9.173021 TCACGGAATCATAGTATTTGTGAATTT 57.827 29.630 0.00 0.00 34.42 1.82
5111 7245 8.731275 TCACGGAATCATAGTATTTGTGAATT 57.269 30.769 0.00 0.00 34.42 2.17
5112 7246 8.612619 GTTCACGGAATCATAGTATTTGTGAAT 58.387 33.333 15.24 0.00 41.39 2.57
5113 7247 7.065324 GGTTCACGGAATCATAGTATTTGTGAA 59.935 37.037 11.21 11.21 39.52 3.18
5114 7248 6.537301 GGTTCACGGAATCATAGTATTTGTGA 59.463 38.462 0.00 0.00 34.99 3.58
5115 7249 6.238374 GGGTTCACGGAATCATAGTATTTGTG 60.238 42.308 0.00 0.00 31.77 3.33
5123 7257 4.142026 TGTGTAGGGTTCACGGAATCATAG 60.142 45.833 0.00 0.00 38.48 2.23
5141 7275 6.115446 ACTAGCCTGTATAGTTACGTGTGTA 58.885 40.000 0.00 0.00 29.01 2.90
5148 7282 7.147949 TGGAAACTGACTAGCCTGTATAGTTAC 60.148 40.741 0.00 0.00 33.64 2.50
5219 7357 3.070018 GACAGCACTTCAGCATGTTACT 58.930 45.455 0.00 0.00 37.40 2.24
5222 7360 1.242076 GGACAGCACTTCAGCATGTT 58.758 50.000 0.00 0.00 37.40 2.71
5233 7371 2.640184 GTATGGGTAAAGGGACAGCAC 58.360 52.381 0.00 0.00 0.00 4.40
5251 7389 4.685513 AAAAAGGAAGGCCCATTAGGTA 57.314 40.909 0.00 0.00 38.26 3.08
5275 7413 6.773976 TTATGGAAATGTTTCTCCCACATC 57.226 37.500 5.56 0.00 33.54 3.06
5277 7415 7.556275 GTCTATTATGGAAATGTTTCTCCCACA 59.444 37.037 5.56 0.00 37.35 4.17
5279 7417 7.060421 GGTCTATTATGGAAATGTTTCTCCCA 58.940 38.462 5.56 0.00 37.35 4.37
5313 7453 9.675464 TCCCGTTTGTTTCTAACTATGAAATAT 57.325 29.630 0.00 0.00 36.10 1.28
5315 7455 7.989416 TCCCGTTTGTTTCTAACTATGAAAT 57.011 32.000 0.00 0.00 36.10 2.17
5316 7456 7.804843 TTCCCGTTTGTTTCTAACTATGAAA 57.195 32.000 0.00 0.00 0.00 2.69
5317 7457 7.804843 TTTCCCGTTTGTTTCTAACTATGAA 57.195 32.000 0.00 0.00 0.00 2.57
5319 7459 7.027161 CCATTTCCCGTTTGTTTCTAACTATG 58.973 38.462 0.00 0.00 0.00 2.23
5321 7461 5.474189 CCCATTTCCCGTTTGTTTCTAACTA 59.526 40.000 0.00 0.00 0.00 2.24
5322 7462 4.279922 CCCATTTCCCGTTTGTTTCTAACT 59.720 41.667 0.00 0.00 0.00 2.24
5323 7463 4.038282 ACCCATTTCCCGTTTGTTTCTAAC 59.962 41.667 0.00 0.00 0.00 2.34
5338 7478 3.227614 ACACCACACCTTTACCCATTTC 58.772 45.455 0.00 0.00 0.00 2.17
5347 7487 3.137544 TGGATACAGAACACCACACCTTT 59.862 43.478 0.00 0.00 46.17 3.11
5369 7509 3.144657 TGGTCTGCACATCAAACAGAT 57.855 42.857 0.00 0.00 42.08 2.90
5370 7510 2.636647 TGGTCTGCACATCAAACAGA 57.363 45.000 0.00 0.00 38.09 3.41
5379 7610 3.220940 TCAACAAATCATGGTCTGCACA 58.779 40.909 0.00 0.00 0.00 4.57
5380 7611 3.921119 TCAACAAATCATGGTCTGCAC 57.079 42.857 0.00 0.00 0.00 4.57
5381 7612 4.933505 TTTCAACAAATCATGGTCTGCA 57.066 36.364 0.00 0.00 0.00 4.41
5382 7613 5.291971 AGTTTTCAACAAATCATGGTCTGC 58.708 37.500 0.00 0.00 0.00 4.26
5409 7640 7.391833 GTGAGGAAATCAGGAACAAGAGTAAAT 59.608 37.037 0.00 0.00 39.07 1.40
5417 7648 2.370519 TCGGTGAGGAAATCAGGAACAA 59.629 45.455 0.00 0.00 39.07 2.83
5450 7681 1.171308 CTGCATCAGAGTTTGGGTGG 58.829 55.000 0.00 0.00 32.44 4.61
5451 7682 1.171308 CCTGCATCAGAGTTTGGGTG 58.829 55.000 0.00 0.00 32.44 4.61
5685 7916 2.866762 CGCTGTATTCTAGTTTCCCTGC 59.133 50.000 0.00 0.00 0.00 4.85
5694 7925 9.171701 GACTACAATAAACTCGCTGTATTCTAG 57.828 37.037 0.00 0.00 0.00 2.43
5795 8026 3.260884 TGATAGGTCTCAGGACACCAAAC 59.739 47.826 0.00 0.00 43.77 2.93
5804 8035 3.509575 GCAGGTATCTGATAGGTCTCAGG 59.490 52.174 7.33 0.00 43.49 3.86
6127 8361 1.784062 CGTACACTCAAGCAGCAGC 59.216 57.895 0.00 0.00 42.56 5.25
6146 8380 3.758554 CCCTACTCCAAAACCAATCACTG 59.241 47.826 0.00 0.00 0.00 3.66
6168 8402 7.173047 GGATAGAAGCAGGAAATCTCATTTCTC 59.827 40.741 8.50 0.00 46.03 2.87
6179 8413 4.038522 CGAGAGATGGATAGAAGCAGGAAA 59.961 45.833 0.00 0.00 0.00 3.13
6184 8418 1.615883 GGCGAGAGATGGATAGAAGCA 59.384 52.381 0.00 0.00 0.00 3.91
6280 8515 6.261603 TGATCATCACTATCACATCCTTTTGC 59.738 38.462 0.00 0.00 0.00 3.68
6281 8516 7.797038 TGATCATCACTATCACATCCTTTTG 57.203 36.000 0.00 0.00 0.00 2.44
6303 8538 1.610624 GCCTTTCCTCGTTCATGGTGA 60.611 52.381 0.00 0.00 0.00 4.02
6358 8598 2.158623 TGTGCCTTCCAGTCAAGAACAT 60.159 45.455 0.00 0.00 0.00 2.71
6359 8599 1.211703 TGTGCCTTCCAGTCAAGAACA 59.788 47.619 0.00 0.00 0.00 3.18
6401 8641 4.474651 TGCCCTTCAATCTCTTGGATAGAA 59.525 41.667 0.00 0.00 33.71 2.10
6416 9191 2.031120 CCAAACAAACTCTGCCCTTCA 58.969 47.619 0.00 0.00 0.00 3.02
6500 9282 3.091545 ACACGGCCTCATCAAATCAATT 58.908 40.909 0.00 0.00 0.00 2.32
6503 9285 2.419990 CCTACACGGCCTCATCAAATCA 60.420 50.000 0.00 0.00 0.00 2.57
6512 9294 0.391263 CCTTGTTCCTACACGGCCTC 60.391 60.000 0.00 0.00 36.94 4.70
6543 9325 0.174845 CCGAGGCATCCTAACGAACA 59.825 55.000 0.00 0.00 31.76 3.18
6561 9343 2.990066 ACTTAGTGACCTATGCAGCC 57.010 50.000 0.00 0.00 0.00 4.85
6571 9353 7.023575 CCAAAAGATGCAACATACTTAGTGAC 58.976 38.462 0.00 0.00 0.00 3.67
6598 9540 6.258727 CCACTAGCACTCATTGTAAAATCGAT 59.741 38.462 0.00 0.00 0.00 3.59
6617 9559 3.326880 ACTTGTTCCACCCTAACCACTAG 59.673 47.826 0.00 0.00 0.00 2.57
6634 9588 3.130340 AGCGGTTTCACAAATTCACTTGT 59.870 39.130 0.00 0.00 40.17 3.16
6636 9590 4.385358 AAGCGGTTTCACAAATTCACTT 57.615 36.364 0.00 0.00 0.00 3.16
6652 9606 4.749245 AACAGTCTGATTTTGTAAGCGG 57.251 40.909 6.91 0.00 0.00 5.52
6671 9670 9.776451 GCATTTCAAAAAGAACAAAAACAAAAC 57.224 25.926 0.00 0.00 35.56 2.43
6676 9675 8.637704 CCTTTGCATTTCAAAAAGAACAAAAAC 58.362 29.630 0.00 0.00 43.44 2.43
6679 9678 7.173907 TCACCTTTGCATTTCAAAAAGAACAAA 59.826 29.630 0.00 0.00 43.44 2.83
6680 9679 6.652481 TCACCTTTGCATTTCAAAAAGAACAA 59.348 30.769 0.00 0.00 43.44 2.83
6681 9680 6.169094 TCACCTTTGCATTTCAAAAAGAACA 58.831 32.000 0.00 0.00 43.44 3.18
6682 9681 6.660887 TCACCTTTGCATTTCAAAAAGAAC 57.339 33.333 0.00 0.00 43.44 3.01
6683 9682 7.695820 CAATCACCTTTGCATTTCAAAAAGAA 58.304 30.769 0.00 0.00 43.44 2.52
6684 9683 7.249186 CAATCACCTTTGCATTTCAAAAAGA 57.751 32.000 0.00 0.00 43.44 2.52
6702 9701 1.672881 GACTGCCCATACTGCAATCAC 59.327 52.381 0.00 0.00 38.46 3.06
6703 9702 1.408683 GGACTGCCCATACTGCAATCA 60.409 52.381 0.00 0.00 36.73 2.57
6727 9726 6.347696 TCATCAATGGGCCAAATGATAAAAC 58.652 36.000 27.70 0.00 31.59 2.43
6737 9736 2.459644 CTTTCCTCATCAATGGGCCAA 58.540 47.619 11.89 0.00 0.00 4.52
6786 9793 3.815401 GGTGCATATTCAGCTATTTCCGT 59.185 43.478 0.00 0.00 0.00 4.69
6790 9797 5.126067 AGTTCGGTGCATATTCAGCTATTT 58.874 37.500 3.15 0.00 32.68 1.40
6834 9843 1.364171 CCGCCAACTCCCTATCGAG 59.636 63.158 0.00 0.00 35.88 4.04
6861 9870 2.930040 CAAGCCACATACCTTACTGTCG 59.070 50.000 0.00 0.00 0.00 4.35
6888 9897 0.307760 GATTATTGGCTCGTTGGGCG 59.692 55.000 0.00 0.00 43.01 6.13
6924 9933 2.552155 GGTTGCAGTTCCCTGTCATACA 60.552 50.000 0.00 0.00 41.02 2.29
6936 9946 1.178276 TTGTTTCGGTGGTTGCAGTT 58.822 45.000 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.