Multiple sequence alignment - TraesCS2B01G077000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G077000 chr2B 100.000 2258 0 0 1 2258 42193401 42195658 0.000000e+00 4170.0
1 TraesCS2B01G077000 chr2B 95.431 2145 71 10 2 2138 563917141 563915016 0.000000e+00 3393.0
2 TraesCS2B01G077000 chr2B 93.738 1581 52 18 566 2138 45596552 45598093 0.000000e+00 2327.0
3 TraesCS2B01G077000 chr2B 94.444 378 20 1 1762 2138 717653789 717654166 4.180000e-162 580.0
4 TraesCS2B01G077000 chr2B 86.066 122 11 2 2137 2257 154583356 154583240 2.350000e-25 126.0
5 TraesCS2B01G077000 chr5B 96.103 2130 61 6 1 2122 464634104 464636219 0.000000e+00 3454.0
6 TraesCS2B01G077000 chr5B 94.830 2147 71 19 1 2138 530940833 530938718 0.000000e+00 3314.0
7 TraesCS2B01G077000 chr5B 80.198 202 27 9 2063 2258 454662987 454663181 3.020000e-29 139.0
8 TraesCS2B01G077000 chr5B 92.553 94 2 1 2170 2258 454662946 454663039 1.820000e-26 130.0
9 TraesCS2B01G077000 chr3B 95.666 2146 70 7 1 2138 16124438 16122308 0.000000e+00 3426.0
10 TraesCS2B01G077000 chr3B 92.772 1342 69 18 815 2138 393329884 393331215 0.000000e+00 1916.0
11 TraesCS2B01G077000 chr3B 89.326 1321 92 22 552 1855 16202941 16201653 0.000000e+00 1613.0
12 TraesCS2B01G077000 chr3B 87.179 117 9 2 2142 2257 179360820 179360709 6.550000e-26 128.0
13 TraesCS2B01G077000 chr4A 95.178 2157 79 15 1 2138 712877476 712879626 0.000000e+00 3384.0
14 TraesCS2B01G077000 chr4A 81.683 202 24 9 2063 2258 698021541 698021347 3.000000e-34 156.0
15 TraesCS2B01G077000 chr7B 94.644 2147 76 18 1 2138 235458096 235455980 0.000000e+00 3291.0
16 TraesCS2B01G077000 chr7B 94.191 2152 104 13 1 2138 687040620 687042764 0.000000e+00 3262.0
17 TraesCS2B01G077000 chr7B 92.894 1534 89 12 618 2138 713543514 713541988 0.000000e+00 2211.0
18 TraesCS2B01G077000 chr7B 92.547 1543 89 15 609 2138 95041366 95039837 0.000000e+00 2189.0
19 TraesCS2B01G077000 chr7B 89.655 116 7 1 2142 2257 577213397 577213507 2.340000e-30 143.0
20 TraesCS2B01G077000 chr4B 96.322 1985 52 10 1 1977 402787205 402785234 0.000000e+00 3241.0
21 TraesCS2B01G077000 chr4B 92.104 2153 100 33 1 2138 49105681 49107778 0.000000e+00 2970.0
22 TraesCS2B01G077000 chr4B 96.978 364 11 0 1805 2168 563810404 563810767 1.480000e-171 612.0
23 TraesCS2B01G077000 chr4B 84.466 206 20 8 2063 2258 563810626 563810829 2.290000e-45 193.0
24 TraesCS2B01G077000 chr1B 94.452 2091 94 14 1 2076 38183389 38185472 0.000000e+00 3199.0
25 TraesCS2B01G077000 chr1B 94.709 378 19 1 1762 2138 550438361 550437984 8.990000e-164 586.0
26 TraesCS2B01G077000 chr1B 92.553 94 2 1 2170 2258 357900140 357900047 1.820000e-26 130.0
27 TraesCS2B01G077000 chr1B 92.424 66 5 0 1714 1779 629311019 629311084 6.640000e-16 95.3
28 TraesCS2B01G077000 chr1B 87.037 54 4 3 1714 1764 302769367 302769314 8.710000e-05 58.4
29 TraesCS2B01G077000 chr6B 92.379 1614 89 19 552 2138 650646154 650644548 0.000000e+00 2268.0
30 TraesCS2B01G077000 chr6B 94.109 1443 55 9 552 1978 687513888 687512460 0.000000e+00 2167.0
31 TraesCS2B01G077000 chr6B 92.857 378 26 1 1762 2138 114143097 114142720 4.240000e-152 547.0
32 TraesCS2B01G077000 chr6B 89.076 119 7 2 2137 2255 661053785 661053897 2.340000e-30 143.0
33 TraesCS2B01G077000 chr6B 87.500 88 8 2 1714 1801 694766396 694766480 5.130000e-17 99.0
34 TraesCS2B01G077000 chr7A 80.000 145 20 6 1709 1847 7463045 7462904 5.130000e-17 99.0
35 TraesCS2B01G077000 chr7A 92.537 67 5 0 1714 1780 719949550 719949484 1.850000e-16 97.1
36 TraesCS2B01G077000 chr2A 91.045 67 6 0 1714 1780 677896307 677896241 8.590000e-15 91.6
37 TraesCS2B01G077000 chr2A 88.060 67 8 0 1714 1780 778407353 778407419 1.860000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G077000 chr2B 42193401 42195658 2257 False 4170 4170 100.000 1 2258 1 chr2B.!!$F1 2257
1 TraesCS2B01G077000 chr2B 563915016 563917141 2125 True 3393 3393 95.431 2 2138 1 chr2B.!!$R2 2136
2 TraesCS2B01G077000 chr2B 45596552 45598093 1541 False 2327 2327 93.738 566 2138 1 chr2B.!!$F2 1572
3 TraesCS2B01G077000 chr5B 464634104 464636219 2115 False 3454 3454 96.103 1 2122 1 chr5B.!!$F1 2121
4 TraesCS2B01G077000 chr5B 530938718 530940833 2115 True 3314 3314 94.830 1 2138 1 chr5B.!!$R1 2137
5 TraesCS2B01G077000 chr3B 16122308 16124438 2130 True 3426 3426 95.666 1 2138 1 chr3B.!!$R1 2137
6 TraesCS2B01G077000 chr3B 393329884 393331215 1331 False 1916 1916 92.772 815 2138 1 chr3B.!!$F1 1323
7 TraesCS2B01G077000 chr3B 16201653 16202941 1288 True 1613 1613 89.326 552 1855 1 chr3B.!!$R2 1303
8 TraesCS2B01G077000 chr4A 712877476 712879626 2150 False 3384 3384 95.178 1 2138 1 chr4A.!!$F1 2137
9 TraesCS2B01G077000 chr7B 235455980 235458096 2116 True 3291 3291 94.644 1 2138 1 chr7B.!!$R2 2137
10 TraesCS2B01G077000 chr7B 687040620 687042764 2144 False 3262 3262 94.191 1 2138 1 chr7B.!!$F2 2137
11 TraesCS2B01G077000 chr7B 713541988 713543514 1526 True 2211 2211 92.894 618 2138 1 chr7B.!!$R3 1520
12 TraesCS2B01G077000 chr7B 95039837 95041366 1529 True 2189 2189 92.547 609 2138 1 chr7B.!!$R1 1529
13 TraesCS2B01G077000 chr4B 402785234 402787205 1971 True 3241 3241 96.322 1 1977 1 chr4B.!!$R1 1976
14 TraesCS2B01G077000 chr4B 49105681 49107778 2097 False 2970 2970 92.104 1 2138 1 chr4B.!!$F1 2137
15 TraesCS2B01G077000 chr1B 38183389 38185472 2083 False 3199 3199 94.452 1 2076 1 chr1B.!!$F1 2075
16 TraesCS2B01G077000 chr6B 650644548 650646154 1606 True 2268 2268 92.379 552 2138 1 chr6B.!!$R2 1586
17 TraesCS2B01G077000 chr6B 687512460 687513888 1428 True 2167 2167 94.109 552 1978 1 chr6B.!!$R3 1426

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 213 0.247185 CATGGGCGCCAAGATTTTGT 59.753 50.0 30.85 0.0 36.95 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2139 2282 0.107456 AGCTTGTCTGGTCACCTGTG 59.893 55.0 0.0 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 211 0.532115 GACATGGGCGCCAAGATTTT 59.468 50.000 30.85 4.60 36.95 1.82
212 213 0.247185 CATGGGCGCCAAGATTTTGT 59.753 50.000 30.85 0.00 36.95 2.83
290 291 2.251818 CCTCTTCTGAAGGTGGAGACA 58.748 52.381 16.83 0.00 38.70 3.41
316 318 5.495436 AGGGTAGAAGGAGACTAAGAGGTTA 59.505 44.000 0.00 0.00 42.68 2.85
350 352 2.543037 TGACCTGGCTGGATACACTA 57.457 50.000 18.12 0.00 46.17 2.74
627 629 3.884091 CGTAGAGGGAGTACAAGTGCTAT 59.116 47.826 0.00 0.00 0.00 2.97
699 761 0.762842 AGTGCTAGTGGTGGTGGTCA 60.763 55.000 0.00 0.00 0.00 4.02
1017 1080 0.749454 GCATGGCTTCATCCGGTTCT 60.749 55.000 0.00 0.00 0.00 3.01
1181 1250 5.249393 ACAAGTCATGGACAGAAGGTAGAAT 59.751 40.000 0.00 0.00 34.60 2.40
1249 1318 1.684450 ACGCATATGACATACCACCGA 59.316 47.619 6.97 0.00 0.00 4.69
1373 1442 5.386060 TCACTTGGATAGATCACGAGGTAT 58.614 41.667 0.00 0.00 0.00 2.73
1458 1527 1.631071 TATGCACGGGGATTGGAGCA 61.631 55.000 0.00 0.00 36.34 4.26
1535 1604 1.609320 GCAAAGAGAAGGAGGCTCGTT 60.609 52.381 21.33 21.33 37.46 3.85
1618 1687 0.853530 ACAAGAAGGGAAAGTGGCCT 59.146 50.000 3.32 0.00 0.00 5.19
1624 1693 1.145571 AGGGAAAGTGGCCTTGTACA 58.854 50.000 3.32 0.00 0.00 2.90
1630 1699 3.290948 AAGTGGCCTTGTACAACTCAA 57.709 42.857 3.59 0.00 0.00 3.02
1647 1716 7.004086 ACAACTCAATAGACAAATGGAAAGGA 58.996 34.615 0.00 0.00 0.00 3.36
1691 1760 7.117812 ACTGTCGAGACTTTGTTTAATGTATGG 59.882 37.037 4.78 0.00 0.00 2.74
1791 1895 5.915196 TCGAGACTATTTGAGATTATGTGCG 59.085 40.000 0.00 0.00 0.00 5.34
1802 1906 6.337356 TGAGATTATGTGCGAACTATGTTCA 58.663 36.000 10.46 0.00 0.00 3.18
1924 2031 7.755582 AAACATTAACAAAAGACAGAAGTGC 57.244 32.000 0.00 0.00 0.00 4.40
2019 2162 1.668419 GACAAGCTGTCTGGTGTGTT 58.332 50.000 8.50 0.00 43.73 3.32
2076 2219 4.263572 CCCACACCCAGACGCCAA 62.264 66.667 0.00 0.00 0.00 4.52
2079 2222 3.168528 ACACCCAGACGCCAAGGT 61.169 61.111 0.00 0.00 0.00 3.50
2082 2225 3.636231 CCCAGACGCCAAGGTCCA 61.636 66.667 0.00 0.00 37.66 4.02
2138 2281 0.530650 ACAAGCTGTCTGGTGTGTCG 60.531 55.000 0.00 0.00 0.00 4.35
2139 2282 1.595382 AAGCTGTCTGGTGTGTCGC 60.595 57.895 0.00 0.00 0.00 5.19
2140 2283 2.280119 GCTGTCTGGTGTGTCGCA 60.280 61.111 0.00 0.00 0.00 5.10
2141 2284 2.598632 GCTGTCTGGTGTGTCGCAC 61.599 63.158 8.06 8.06 46.97 5.34
2152 2295 2.734591 GTCGCACAGGTGACCAGA 59.265 61.111 3.63 0.00 46.44 3.86
2153 2296 1.664965 GTCGCACAGGTGACCAGAC 60.665 63.158 3.63 1.51 46.44 3.51
2154 2297 2.131067 TCGCACAGGTGACCAGACA 61.131 57.895 3.63 0.00 0.00 3.41
2155 2298 1.227527 CGCACAGGTGACCAGACAA 60.228 57.895 3.63 0.00 0.00 3.18
2156 2299 1.224069 CGCACAGGTGACCAGACAAG 61.224 60.000 3.63 0.00 0.00 3.16
2157 2300 1.510480 GCACAGGTGACCAGACAAGC 61.510 60.000 3.63 0.00 0.00 4.01
2158 2301 0.107456 CACAGGTGACCAGACAAGCT 59.893 55.000 3.63 0.00 0.00 3.74
2159 2302 0.107456 ACAGGTGACCAGACAAGCTG 59.893 55.000 3.63 0.00 43.38 4.24
2160 2303 0.107456 CAGGTGACCAGACAAGCTGT 59.893 55.000 3.63 0.00 43.33 4.40
2161 2304 4.440604 ACAGGTGACCAGACAAGCTGTC 62.441 54.545 3.63 7.88 46.63 3.51
2168 2311 3.642755 GACAAGCTGTCCGGTGTG 58.357 61.111 0.00 0.00 41.37 3.82
2169 2312 1.227556 GACAAGCTGTCCGGTGTGT 60.228 57.895 0.00 0.00 41.37 3.72
2170 2313 1.222115 GACAAGCTGTCCGGTGTGTC 61.222 60.000 0.00 3.92 41.37 3.67
2171 2314 2.029073 AAGCTGTCCGGTGTGTCG 59.971 61.111 0.00 0.00 0.00 4.35
2172 2315 4.664677 AGCTGTCCGGTGTGTCGC 62.665 66.667 0.00 0.00 0.00 5.19
2180 2323 4.961511 GGTGTGTCGCGCAGGTGA 62.962 66.667 8.75 0.00 0.00 4.02
2185 2328 4.357947 GTCGCGCAGGTGACCAGA 62.358 66.667 8.75 0.00 45.75 3.86
2186 2329 4.357947 TCGCGCAGGTGACCAGAC 62.358 66.667 8.75 0.00 0.00 3.51
2188 2331 4.664677 GCGCAGGTGACCAGACGT 62.665 66.667 3.63 0.00 0.00 4.34
2189 2332 2.430921 CGCAGGTGACCAGACGTC 60.431 66.667 7.70 7.70 42.33 4.34
2190 2333 2.920645 CGCAGGTGACCAGACGTCT 61.921 63.158 13.58 13.58 42.49 4.18
2191 2334 1.373497 GCAGGTGACCAGACGTCTG 60.373 63.158 33.87 33.87 42.49 3.51
2208 2351 3.149196 GTCTGGTGTGTTTGATGGACAT 58.851 45.455 0.00 0.00 0.00 3.06
2225 2368 1.918293 ATCCAGACGCCAAGGTCCA 60.918 57.895 0.00 0.00 37.66 4.02
2255 2398 4.704833 CCCACACCCAGACGCCAG 62.705 72.222 0.00 0.00 0.00 4.85
2256 2399 4.704833 CCACACCCAGACGCCAGG 62.705 72.222 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
212 213 3.138283 ACTGTGATTGGTCCAAGAAAGGA 59.862 43.478 10.72 0.00 34.64 3.36
290 291 5.222589 ACCTCTTAGTCTCCTTCTACCCTTT 60.223 44.000 0.00 0.00 0.00 3.11
316 318 2.713167 CAGGTCATCCATATCACCCCTT 59.287 50.000 0.00 0.00 35.89 3.95
350 352 3.367292 CCGCTACCAAATTGTTTCATGCT 60.367 43.478 0.00 0.00 0.00 3.79
627 629 1.035932 GCTAGCTCGACCACCACCTA 61.036 60.000 7.70 0.00 0.00 3.08
995 1058 2.191513 CCGGATGAAGCCATGCCTG 61.192 63.158 0.00 0.00 37.79 4.85
1181 1250 2.438411 AGTTGGGACACACGAAAAACA 58.562 42.857 0.00 0.00 39.29 2.83
1326 1395 0.111253 CTTGCAAAGTGGAGGAGGGT 59.889 55.000 0.00 0.00 39.70 4.34
1458 1527 1.110442 CTCCTTCTCACGATGCTCCT 58.890 55.000 0.00 0.00 0.00 3.69
1535 1604 5.568620 AGTTTTCTTGCCCTCTCTTCTTA 57.431 39.130 0.00 0.00 0.00 2.10
1618 1687 8.684386 TTCCATTTGTCTATTGAGTTGTACAA 57.316 30.769 3.59 3.59 0.00 2.41
1624 1693 7.039714 GGTTCCTTTCCATTTGTCTATTGAGTT 60.040 37.037 0.00 0.00 0.00 3.01
1630 1699 4.270008 CCGGTTCCTTTCCATTTGTCTAT 58.730 43.478 0.00 0.00 0.00 1.98
1647 1716 1.082117 GTTCATCATCGACGCCGGTT 61.082 55.000 1.90 0.00 36.24 4.44
1691 1760 4.989168 ACACAAGGTCTCGAATAACAAGTC 59.011 41.667 0.00 0.00 0.00 3.01
1791 1895 8.132362 ACTAGTCTCGAATGATGAACATAGTTC 58.868 37.037 3.05 3.05 38.38 3.01
1802 1906 7.753309 AGCATACTAACTAGTCTCGAATGAT 57.247 36.000 0.00 0.00 37.73 2.45
1924 2031 0.248866 GGACCTGGTGTTTTTGCACG 60.249 55.000 2.82 0.00 40.08 5.34
2019 2162 1.003839 GCGTCTGGGTGTCCATCAA 60.004 57.895 0.00 0.00 43.11 2.57
2076 2219 4.101448 GCCAGACGCCATGGACCT 62.101 66.667 18.40 5.48 40.51 3.85
2079 2222 4.147449 CGAGCCAGACGCCATGGA 62.147 66.667 18.40 0.00 40.51 3.41
2138 2281 1.510480 GCTTGTCTGGTCACCTGTGC 61.510 60.000 0.00 0.00 0.00 4.57
2139 2282 0.107456 AGCTTGTCTGGTCACCTGTG 59.893 55.000 0.00 0.00 0.00 3.66
2140 2283 0.107456 CAGCTTGTCTGGTCACCTGT 59.893 55.000 0.00 0.00 39.15 4.00
2141 2284 2.924185 CAGCTTGTCTGGTCACCTG 58.076 57.895 0.00 0.00 39.15 4.00
2142 2285 2.987996 GGACAGCTTGTCTGGTCACCT 61.988 57.143 13.59 0.00 46.19 4.00
2143 2286 0.603975 GGACAGCTTGTCTGGTCACC 60.604 60.000 13.59 0.00 46.19 4.02
2144 2287 2.919971 GGACAGCTTGTCTGGTCAC 58.080 57.895 13.59 0.00 46.19 3.67
2150 2293 1.069765 CACACCGGACAGCTTGTCT 59.930 57.895 9.46 0.00 46.19 3.41
2151 2294 1.222115 GACACACCGGACAGCTTGTC 61.222 60.000 9.46 7.25 46.23 3.18
2152 2295 1.227556 GACACACCGGACAGCTTGT 60.228 57.895 9.46 0.00 0.00 3.16
2153 2296 2.310233 CGACACACCGGACAGCTTG 61.310 63.158 9.46 0.00 0.00 4.01
2154 2297 2.029073 CGACACACCGGACAGCTT 59.971 61.111 9.46 0.00 0.00 3.74
2155 2298 4.664677 GCGACACACCGGACAGCT 62.665 66.667 9.46 0.00 0.00 4.24
2163 2306 4.961511 TCACCTGCGCGACACACC 62.962 66.667 12.10 0.00 0.00 4.16
2164 2307 3.702555 GTCACCTGCGCGACACAC 61.703 66.667 12.10 0.00 32.24 3.82
2165 2308 4.961511 GGTCACCTGCGCGACACA 62.962 66.667 12.10 0.00 33.66 3.72
2166 2309 4.961511 TGGTCACCTGCGCGACAC 62.962 66.667 12.10 0.00 33.66 3.67
2167 2310 4.662961 CTGGTCACCTGCGCGACA 62.663 66.667 12.10 6.68 33.66 4.35
2168 2311 4.357947 TCTGGTCACCTGCGCGAC 62.358 66.667 12.10 3.44 0.00 5.19
2169 2312 4.357947 GTCTGGTCACCTGCGCGA 62.358 66.667 12.10 0.00 0.00 5.87
2171 2314 4.664677 ACGTCTGGTCACCTGCGC 62.665 66.667 14.43 0.00 0.00 6.09
2172 2315 2.430921 GACGTCTGGTCACCTGCG 60.431 66.667 8.70 13.38 45.36 5.18
2182 2325 1.934589 TCAAACACACCAGACGTCTG 58.065 50.000 33.87 33.87 43.40 3.51
2183 2326 2.483876 CATCAAACACACCAGACGTCT 58.516 47.619 13.58 13.58 0.00 4.18
2184 2327 1.531149 CCATCAAACACACCAGACGTC 59.469 52.381 7.70 7.70 0.00 4.34
2185 2328 1.140052 TCCATCAAACACACCAGACGT 59.860 47.619 0.00 0.00 0.00 4.34
2186 2329 1.531149 GTCCATCAAACACACCAGACG 59.469 52.381 0.00 0.00 0.00 4.18
2187 2330 2.571212 TGTCCATCAAACACACCAGAC 58.429 47.619 0.00 0.00 0.00 3.51
2188 2331 3.411446 GATGTCCATCAAACACACCAGA 58.589 45.455 2.43 0.00 37.74 3.86
2189 2332 2.489329 GGATGTCCATCAAACACACCAG 59.511 50.000 9.34 0.00 39.54 4.00
2190 2333 2.158549 TGGATGTCCATCAAACACACCA 60.159 45.455 9.34 0.00 42.01 4.17
2191 2334 2.489329 CTGGATGTCCATCAAACACACC 59.511 50.000 9.34 0.00 46.46 4.16
2192 2335 3.189287 GTCTGGATGTCCATCAAACACAC 59.811 47.826 9.34 0.00 46.46 3.82
2193 2336 3.411446 GTCTGGATGTCCATCAAACACA 58.589 45.455 9.34 0.00 46.46 3.72
2194 2337 2.416547 CGTCTGGATGTCCATCAAACAC 59.583 50.000 9.34 0.00 46.46 3.32
2195 2338 2.698803 CGTCTGGATGTCCATCAAACA 58.301 47.619 9.34 0.00 46.46 2.83
2196 2339 1.398390 GCGTCTGGATGTCCATCAAAC 59.602 52.381 9.34 3.54 46.46 2.93
2197 2340 1.678728 GGCGTCTGGATGTCCATCAAA 60.679 52.381 9.34 0.00 46.46 2.69
2198 2341 0.107703 GGCGTCTGGATGTCCATCAA 60.108 55.000 9.34 0.00 46.46 2.57
2208 2351 1.918293 ATGGACCTTGGCGTCTGGA 60.918 57.895 6.64 0.00 33.07 3.86
2238 2381 4.704833 CTGGCGTCTGGGTGTGGG 62.705 72.222 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.