Multiple sequence alignment - TraesCS2B01G075400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G075400 chr2B 100.000 2706 0 0 1 2706 40952863 40955568 0.000000e+00 4998.0
1 TraesCS2B01G075400 chr2B 93.480 1227 56 10 956 2173 41070526 41071737 0.000000e+00 1801.0
2 TraesCS2B01G075400 chr2B 92.038 1143 64 13 629 1758 41086728 41087856 0.000000e+00 1581.0
3 TraesCS2B01G075400 chr2B 84.833 600 70 15 1816 2405 41087876 41088464 3.880000e-163 584.0
4 TraesCS2B01G075400 chr2B 84.738 439 61 4 46 483 31053553 31053120 4.140000e-118 435.0
5 TraesCS2B01G075400 chr2B 97.500 40 1 0 557 596 15696898 15696859 4.830000e-08 69.4
6 TraesCS2B01G075400 chr2B 97.500 40 1 0 557 596 15759021 15758982 4.830000e-08 69.4
7 TraesCS2B01G075400 chrUn 92.301 1143 61 13 629 1758 363599911 363601039 0.000000e+00 1598.0
8 TraesCS2B01G075400 chrUn 92.213 1143 62 13 629 1758 364951440 364950312 0.000000e+00 1592.0
9 TraesCS2B01G075400 chrUn 92.038 1143 64 13 629 1758 298963440 298962312 0.000000e+00 1581.0
10 TraesCS2B01G075400 chrUn 92.038 1143 64 13 629 1758 307972506 307973634 0.000000e+00 1581.0
11 TraesCS2B01G075400 chrUn 92.038 1143 64 13 629 1758 363577400 363576272 0.000000e+00 1581.0
12 TraesCS2B01G075400 chrUn 91.864 1143 66 13 629 1758 162966003 162967131 0.000000e+00 1570.0
13 TraesCS2B01G075400 chrUn 91.731 520 28 6 629 1144 163005380 163005888 0.000000e+00 708.0
14 TraesCS2B01G075400 chrUn 91.731 520 28 6 629 1144 406084229 406083721 0.000000e+00 708.0
15 TraesCS2B01G075400 chrUn 84.833 600 70 14 1816 2405 162967151 162967739 3.880000e-163 584.0
16 TraesCS2B01G075400 chrUn 84.833 600 70 15 1816 2405 298962292 298961704 3.880000e-163 584.0
17 TraesCS2B01G075400 chrUn 84.833 600 70 15 1816 2405 307973654 307974242 3.880000e-163 584.0
18 TraesCS2B01G075400 chrUn 84.833 600 70 14 1816 2405 364950292 364949704 3.880000e-163 584.0
19 TraesCS2B01G075400 chrUn 84.833 600 70 14 1816 2405 440447929 440448517 3.880000e-163 584.0
20 TraesCS2B01G075400 chrUn 84.667 600 71 14 1816 2405 163007209 163007797 1.810000e-161 579.0
21 TraesCS2B01G075400 chrUn 89.474 323 34 0 161 483 163004347 163004669 2.510000e-110 409.0
22 TraesCS2B01G075400 chrUn 89.474 323 34 0 161 483 298964472 298964150 2.510000e-110 409.0
23 TraesCS2B01G075400 chrUn 89.474 323 34 0 161 483 307971474 307971796 2.510000e-110 409.0
24 TraesCS2B01G075400 chr2A 88.144 970 89 16 1222 2173 27628753 27629714 0.000000e+00 1131.0
25 TraesCS2B01G075400 chr2A 86.189 963 110 13 1222 2170 27639076 27640029 0.000000e+00 1020.0
26 TraesCS2B01G075400 chr2D 85.849 848 73 32 983 1792 25324451 25323613 0.000000e+00 857.0
27 TraesCS2B01G075400 chr2D 86.585 410 48 4 4 409 11261057 11260651 1.910000e-121 446.0
28 TraesCS2B01G075400 chr3A 87.500 464 53 3 20 482 497109177 497109636 5.130000e-147 531.0
29 TraesCS2B01G075400 chr3A 86.237 465 61 3 20 483 497287477 497287939 4.020000e-138 501.0
30 TraesCS2B01G075400 chr3D 86.452 465 59 3 20 483 374422494 374422955 8.650000e-140 507.0
31 TraesCS2B01G075400 chr3D 93.333 45 2 1 552 596 48303775 48303818 6.250000e-07 65.8
32 TraesCS2B01G075400 chr5B 84.886 483 60 5 1 483 534926374 534926843 2.440000e-130 475.0
33 TraesCS2B01G075400 chr5B 87.500 56 3 3 556 611 334896844 334896895 8.090000e-06 62.1
34 TraesCS2B01G075400 chr5D 93.714 175 10 1 2422 2596 45256220 45256393 7.430000e-66 261.0
35 TraesCS2B01G075400 chr5D 90.196 51 1 4 560 610 52749193 52749147 2.250000e-06 63.9
36 TraesCS2B01G075400 chr5A 93.878 49 3 0 548 596 463357466 463357514 1.040000e-09 75.0
37 TraesCS2B01G075400 chr1D 95.455 44 0 2 550 591 392952147 392952190 4.830000e-08 69.4
38 TraesCS2B01G075400 chr3B 90.000 50 4 1 548 596 749148628 749148579 2.250000e-06 63.9
39 TraesCS2B01G075400 chr6D 88.679 53 3 2 560 610 143424012 143424063 8.090000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G075400 chr2B 40952863 40955568 2705 False 4998.000000 4998 100.000000 1 2706 1 chr2B.!!$F1 2705
1 TraesCS2B01G075400 chr2B 41070526 41071737 1211 False 1801.000000 1801 93.480000 956 2173 1 chr2B.!!$F2 1217
2 TraesCS2B01G075400 chr2B 41086728 41088464 1736 False 1082.500000 1581 88.435500 629 2405 2 chr2B.!!$F3 1776
3 TraesCS2B01G075400 chrUn 363599911 363601039 1128 False 1598.000000 1598 92.301000 629 1758 1 chrUn.!!$F1 1129
4 TraesCS2B01G075400 chrUn 363576272 363577400 1128 True 1581.000000 1581 92.038000 629 1758 1 chrUn.!!$R1 1129
5 TraesCS2B01G075400 chrUn 364949704 364951440 1736 True 1088.000000 1592 88.523000 629 2405 2 chrUn.!!$R4 1776
6 TraesCS2B01G075400 chrUn 162966003 162967739 1736 False 1077.000000 1570 88.348500 629 2405 2 chrUn.!!$F3 1776
7 TraesCS2B01G075400 chrUn 298961704 298964472 2768 True 858.000000 1581 88.781667 161 2405 3 chrUn.!!$R3 2244
8 TraesCS2B01G075400 chrUn 307971474 307974242 2768 False 858.000000 1581 88.781667 161 2405 3 chrUn.!!$F5 2244
9 TraesCS2B01G075400 chrUn 406083721 406084229 508 True 708.000000 708 91.731000 629 1144 1 chrUn.!!$R2 515
10 TraesCS2B01G075400 chrUn 440447929 440448517 588 False 584.000000 584 84.833000 1816 2405 1 chrUn.!!$F2 589
11 TraesCS2B01G075400 chrUn 163004347 163007797 3450 False 565.333333 708 88.624000 161 2405 3 chrUn.!!$F4 2244
12 TraesCS2B01G075400 chr2A 27628753 27629714 961 False 1131.000000 1131 88.144000 1222 2173 1 chr2A.!!$F1 951
13 TraesCS2B01G075400 chr2A 27639076 27640029 953 False 1020.000000 1020 86.189000 1222 2170 1 chr2A.!!$F2 948
14 TraesCS2B01G075400 chr2D 25323613 25324451 838 True 857.000000 857 85.849000 983 1792 1 chr2D.!!$R2 809

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
145 146 0.035458 CGGAAGAGAGTGTGCCCTTT 59.965 55.0 0.0 0.0 0.00 3.11 F
719 1306 0.037975 CCACCAGCCAATGCAAAGTC 60.038 55.0 0.0 0.0 41.13 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1573 2201 1.219393 GTAGTCAGGGTGAGGCTGC 59.781 63.158 0.00 0.00 0.00 5.25 R
2472 3769 0.041839 CCAATCAGATAAGCGCACGC 60.042 55.000 11.47 6.99 42.33 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 7.979115 TGTATCTAAAGTGTGTTTGTTTTGC 57.021 32.000 0.00 0.00 0.00 3.68
73 74 6.689241 TGTATCTAAAGTGTGTTTGTTTTGCG 59.311 34.615 0.00 0.00 0.00 4.85
74 75 5.049398 TCTAAAGTGTGTTTGTTTTGCGT 57.951 34.783 0.00 0.00 0.00 5.24
75 76 5.462405 TCTAAAGTGTGTTTGTTTTGCGTT 58.538 33.333 0.00 0.00 0.00 4.84
76 77 5.921408 TCTAAAGTGTGTTTGTTTTGCGTTT 59.079 32.000 0.00 0.00 0.00 3.60
77 78 7.082602 TCTAAAGTGTGTTTGTTTTGCGTTTA 58.917 30.769 0.00 0.00 0.00 2.01
78 79 6.713792 AAAGTGTGTTTGTTTTGCGTTTAT 57.286 29.167 0.00 0.00 0.00 1.40
79 80 6.713792 AAGTGTGTTTGTTTTGCGTTTATT 57.286 29.167 0.00 0.00 0.00 1.40
80 81 6.088719 AGTGTGTTTGTTTTGCGTTTATTG 57.911 33.333 0.00 0.00 0.00 1.90
81 82 4.721507 GTGTGTTTGTTTTGCGTTTATTGC 59.278 37.500 0.00 0.00 0.00 3.56
82 83 4.388773 TGTGTTTGTTTTGCGTTTATTGCA 59.611 33.333 0.00 0.00 41.38 4.08
83 84 4.721507 GTGTTTGTTTTGCGTTTATTGCAC 59.278 37.500 0.00 0.00 43.10 4.57
84 85 3.825498 TTGTTTTGCGTTTATTGCACG 57.175 38.095 0.00 0.00 43.10 5.34
85 86 2.120232 TGTTTTGCGTTTATTGCACGG 58.880 42.857 0.00 0.00 43.10 4.94
86 87 2.223502 TGTTTTGCGTTTATTGCACGGA 60.224 40.909 0.00 0.00 43.10 4.69
87 88 2.983803 GTTTTGCGTTTATTGCACGGAT 59.016 40.909 0.00 0.00 43.10 4.18
88 89 2.999507 TTGCGTTTATTGCACGGATT 57.000 40.000 0.00 0.00 43.10 3.01
89 90 2.254918 TGCGTTTATTGCACGGATTG 57.745 45.000 0.00 0.00 37.44 2.67
90 91 1.537638 TGCGTTTATTGCACGGATTGT 59.462 42.857 0.00 0.00 37.44 2.71
91 92 2.173964 GCGTTTATTGCACGGATTGTC 58.826 47.619 0.00 0.00 38.13 3.18
92 93 2.159572 GCGTTTATTGCACGGATTGTCT 60.160 45.455 0.00 0.00 38.13 3.41
93 94 3.670203 CGTTTATTGCACGGATTGTCTC 58.330 45.455 0.00 0.00 33.86 3.36
94 95 3.124466 CGTTTATTGCACGGATTGTCTCA 59.876 43.478 0.00 0.00 33.86 3.27
95 96 4.201812 CGTTTATTGCACGGATTGTCTCAT 60.202 41.667 0.00 0.00 33.86 2.90
96 97 4.880886 TTATTGCACGGATTGTCTCATG 57.119 40.909 0.00 0.00 0.00 3.07
97 98 0.804364 TTGCACGGATTGTCTCATGC 59.196 50.000 0.00 0.00 37.79 4.06
98 99 0.321475 TGCACGGATTGTCTCATGCA 60.321 50.000 0.00 0.00 42.20 3.96
99 100 0.804364 GCACGGATTGTCTCATGCAA 59.196 50.000 0.00 0.00 37.43 4.08
100 101 1.466360 GCACGGATTGTCTCATGCAAC 60.466 52.381 0.00 0.00 37.43 4.17
101 102 1.078709 ACGGATTGTCTCATGCAACG 58.921 50.000 0.00 0.00 0.00 4.10
102 103 0.247814 CGGATTGTCTCATGCAACGC 60.248 55.000 0.00 0.00 0.00 4.84
103 104 1.089920 GGATTGTCTCATGCAACGCT 58.910 50.000 0.00 0.00 0.00 5.07
104 105 2.279741 GGATTGTCTCATGCAACGCTA 58.720 47.619 0.00 0.00 0.00 4.26
105 106 2.286294 GGATTGTCTCATGCAACGCTAG 59.714 50.000 0.00 0.00 0.00 3.42
106 107 1.725641 TTGTCTCATGCAACGCTAGG 58.274 50.000 0.00 0.00 0.00 3.02
107 108 0.740868 TGTCTCATGCAACGCTAGGC 60.741 55.000 0.00 0.00 0.00 3.93
108 109 0.460987 GTCTCATGCAACGCTAGGCT 60.461 55.000 0.00 0.00 0.00 4.58
109 110 1.111277 TCTCATGCAACGCTAGGCTA 58.889 50.000 0.00 0.00 0.00 3.93
110 111 1.067669 TCTCATGCAACGCTAGGCTAG 59.932 52.381 17.33 17.33 0.00 3.42
111 112 1.067669 CTCATGCAACGCTAGGCTAGA 59.932 52.381 25.37 3.16 0.00 2.43
112 113 1.067669 TCATGCAACGCTAGGCTAGAG 59.932 52.381 25.37 23.41 0.00 2.43
113 114 1.115467 ATGCAACGCTAGGCTAGAGT 58.885 50.000 25.37 24.11 40.64 3.24
115 116 1.135083 TGCAACGCTAGGCTAGAGTTC 60.135 52.381 32.13 26.09 45.07 3.01
116 117 1.135083 GCAACGCTAGGCTAGAGTTCA 60.135 52.381 32.13 0.00 45.07 3.18
117 118 2.674177 GCAACGCTAGGCTAGAGTTCAA 60.674 50.000 32.13 0.00 45.07 2.69
118 119 3.786635 CAACGCTAGGCTAGAGTTCAAT 58.213 45.455 32.13 15.61 45.07 2.57
119 120 3.444703 ACGCTAGGCTAGAGTTCAATG 57.555 47.619 25.37 5.95 35.17 2.82
120 121 3.024547 ACGCTAGGCTAGAGTTCAATGA 58.975 45.455 25.37 0.00 35.17 2.57
121 122 3.447586 ACGCTAGGCTAGAGTTCAATGAA 59.552 43.478 25.37 0.00 35.17 2.57
122 123 4.100189 ACGCTAGGCTAGAGTTCAATGAAT 59.900 41.667 25.37 0.00 35.17 2.57
123 124 5.053145 CGCTAGGCTAGAGTTCAATGAATT 58.947 41.667 25.37 0.00 0.00 2.17
124 125 6.183360 ACGCTAGGCTAGAGTTCAATGAATTA 60.183 38.462 25.37 0.00 35.17 1.40
125 126 6.701841 CGCTAGGCTAGAGTTCAATGAATTAA 59.298 38.462 25.37 0.00 0.00 1.40
126 127 7.306866 CGCTAGGCTAGAGTTCAATGAATTAAC 60.307 40.741 25.37 0.16 0.00 2.01
127 128 6.910536 AGGCTAGAGTTCAATGAATTAACG 57.089 37.500 0.00 0.00 0.00 3.18
128 129 5.817816 AGGCTAGAGTTCAATGAATTAACGG 59.182 40.000 0.00 0.00 0.00 4.44
129 130 5.815740 GGCTAGAGTTCAATGAATTAACGGA 59.184 40.000 0.00 0.00 0.00 4.69
130 131 6.315393 GGCTAGAGTTCAATGAATTAACGGAA 59.685 38.462 0.00 0.00 0.00 4.30
131 132 7.402640 GCTAGAGTTCAATGAATTAACGGAAG 58.597 38.462 0.00 0.00 0.00 3.46
132 133 7.277981 GCTAGAGTTCAATGAATTAACGGAAGA 59.722 37.037 0.00 0.00 0.00 2.87
133 134 7.602517 AGAGTTCAATGAATTAACGGAAGAG 57.397 36.000 0.00 0.00 0.00 2.85
134 135 7.386851 AGAGTTCAATGAATTAACGGAAGAGA 58.613 34.615 0.00 0.00 0.00 3.10
135 136 7.547370 AGAGTTCAATGAATTAACGGAAGAGAG 59.453 37.037 0.00 0.00 0.00 3.20
136 137 7.162082 AGTTCAATGAATTAACGGAAGAGAGT 58.838 34.615 0.00 0.00 0.00 3.24
137 138 6.968131 TCAATGAATTAACGGAAGAGAGTG 57.032 37.500 0.00 0.00 0.00 3.51
138 139 6.464222 TCAATGAATTAACGGAAGAGAGTGT 58.536 36.000 0.00 0.00 0.00 3.55
139 140 6.368791 TCAATGAATTAACGGAAGAGAGTGTG 59.631 38.462 0.00 0.00 0.00 3.82
140 141 3.994392 TGAATTAACGGAAGAGAGTGTGC 59.006 43.478 0.00 0.00 0.00 4.57
141 142 2.450609 TTAACGGAAGAGAGTGTGCC 57.549 50.000 0.00 0.00 0.00 5.01
142 143 0.606604 TAACGGAAGAGAGTGTGCCC 59.393 55.000 0.00 0.00 0.00 5.36
143 144 1.122019 AACGGAAGAGAGTGTGCCCT 61.122 55.000 0.00 0.00 0.00 5.19
144 145 1.122019 ACGGAAGAGAGTGTGCCCTT 61.122 55.000 0.00 0.00 0.00 3.95
145 146 0.035458 CGGAAGAGAGTGTGCCCTTT 59.965 55.000 0.00 0.00 0.00 3.11
146 147 1.528129 GGAAGAGAGTGTGCCCTTTG 58.472 55.000 0.00 0.00 0.00 2.77
147 148 1.202818 GGAAGAGAGTGTGCCCTTTGT 60.203 52.381 0.00 0.00 0.00 2.83
148 149 1.876156 GAAGAGAGTGTGCCCTTTGTG 59.124 52.381 0.00 0.00 0.00 3.33
149 150 0.839946 AGAGAGTGTGCCCTTTGTGT 59.160 50.000 0.00 0.00 0.00 3.72
150 151 0.947244 GAGAGTGTGCCCTTTGTGTG 59.053 55.000 0.00 0.00 0.00 3.82
151 152 0.255890 AGAGTGTGCCCTTTGTGTGT 59.744 50.000 0.00 0.00 0.00 3.72
152 153 0.663153 GAGTGTGCCCTTTGTGTGTC 59.337 55.000 0.00 0.00 0.00 3.67
153 154 1.095228 AGTGTGCCCTTTGTGTGTCG 61.095 55.000 0.00 0.00 0.00 4.35
154 155 1.078072 TGTGCCCTTTGTGTGTCGT 60.078 52.632 0.00 0.00 0.00 4.34
155 156 1.355210 GTGCCCTTTGTGTGTCGTG 59.645 57.895 0.00 0.00 0.00 4.35
156 157 1.821759 TGCCCTTTGTGTGTCGTGG 60.822 57.895 0.00 0.00 0.00 4.94
157 158 2.551912 GCCCTTTGTGTGTCGTGGG 61.552 63.158 0.00 0.00 37.76 4.61
158 159 1.896660 CCCTTTGTGTGTCGTGGGG 60.897 63.158 0.00 0.00 0.00 4.96
159 160 1.153046 CCTTTGTGTGTCGTGGGGT 60.153 57.895 0.00 0.00 0.00 4.95
176 177 4.949856 GTGGGGTCACTTACATCATTGAAT 59.050 41.667 0.00 0.00 40.58 2.57
180 181 5.126061 GGGTCACTTACATCATTGAATTGCT 59.874 40.000 0.00 0.00 0.00 3.91
186 187 7.274904 CACTTACATCATTGAATTGCTGAAAGG 59.725 37.037 0.00 0.00 0.00 3.11
189 190 4.789012 TCATTGAATTGCTGAAAGGACC 57.211 40.909 0.00 0.00 29.42 4.46
191 192 1.533625 TGAATTGCTGAAAGGACCGG 58.466 50.000 0.00 0.00 29.42 5.28
204 205 1.153229 GACCGGCAAGGACCCATAC 60.153 63.158 0.00 0.00 45.00 2.39
227 228 2.421529 GGAGGCGAATTATGGGTTCAGT 60.422 50.000 0.00 0.00 0.00 3.41
230 231 3.054361 AGGCGAATTATGGGTTCAGTTCT 60.054 43.478 0.00 0.00 0.00 3.01
237 238 6.737254 ATTATGGGTTCAGTTCTTTACACG 57.263 37.500 0.00 0.00 0.00 4.49
240 241 3.064931 GGGTTCAGTTCTTTACACGGAG 58.935 50.000 0.00 0.00 0.00 4.63
266 267 4.583489 GTCTAACCGGTGGAGAGATGATAA 59.417 45.833 17.60 0.00 0.00 1.75
281 282 8.558973 AGAGATGATAAGTTTTTCCTTGACAG 57.441 34.615 0.00 0.00 0.00 3.51
283 284 6.660949 AGATGATAAGTTTTTCCTTGACAGGG 59.339 38.462 0.00 0.00 41.25 4.45
329 330 2.933495 TCTCACCGATTCGAACGATT 57.067 45.000 17.68 0.00 0.00 3.34
358 359 6.072673 ACCCATTTCATTCTTACGTCTTCAAC 60.073 38.462 0.00 0.00 0.00 3.18
376 377 3.196469 TCAACAGAAGAATCAGGCTCGAT 59.804 43.478 0.00 0.00 0.00 3.59
380 381 2.123342 GAAGAATCAGGCTCGATGACG 58.877 52.381 0.00 0.00 41.26 4.35
395 396 3.356639 GACGATGAGACTGGCCGCA 62.357 63.158 0.00 0.00 0.00 5.69
406 407 2.045926 GGCCGCACTCCTTGACAT 60.046 61.111 0.00 0.00 0.00 3.06
411 412 2.224066 GCCGCACTCCTTGACATACTAT 60.224 50.000 0.00 0.00 0.00 2.12
419 420 5.163301 ACTCCTTGACATACTATCGCCAAAT 60.163 40.000 0.00 0.00 0.00 2.32
426 427 8.942338 TGACATACTATCGCCAAATAATATCC 57.058 34.615 0.00 0.00 0.00 2.59
434 435 4.522405 TCGCCAAATAATATCCACATTGGG 59.478 41.667 4.69 0.00 38.32 4.12
438 439 5.511202 CCAAATAATATCCACATTGGGGTGC 60.511 44.000 4.51 0.00 38.32 5.01
457 458 1.130561 GCCATTTGTGACTCGCCTAAC 59.869 52.381 0.00 0.00 0.00 2.34
475 476 7.016361 GCCTAACGAACACAAATCTTATCAT 57.984 36.000 0.00 0.00 0.00 2.45
485 965 7.596494 ACACAAATCTTATCATCAAACACAGG 58.404 34.615 0.00 0.00 0.00 4.00
498 978 6.548441 TCAAACACAGGAAATTAGTTACGG 57.452 37.500 0.00 0.00 0.00 4.02
500 980 6.938030 TCAAACACAGGAAATTAGTTACGGAT 59.062 34.615 0.00 0.00 0.00 4.18
501 981 6.737254 AACACAGGAAATTAGTTACGGATG 57.263 37.500 0.00 0.00 0.00 3.51
502 982 4.634443 ACACAGGAAATTAGTTACGGATGC 59.366 41.667 0.00 0.00 0.00 3.91
503 983 4.876107 CACAGGAAATTAGTTACGGATGCT 59.124 41.667 0.00 0.00 0.00 3.79
504 984 5.006746 CACAGGAAATTAGTTACGGATGCTC 59.993 44.000 0.00 0.00 0.00 4.26
505 985 5.104900 ACAGGAAATTAGTTACGGATGCTCT 60.105 40.000 0.00 0.00 0.00 4.09
506 986 5.235186 CAGGAAATTAGTTACGGATGCTCTG 59.765 44.000 0.00 0.00 0.00 3.35
507 987 5.128827 AGGAAATTAGTTACGGATGCTCTGA 59.871 40.000 0.00 0.00 0.00 3.27
508 988 5.234543 GGAAATTAGTTACGGATGCTCTGAC 59.765 44.000 0.00 0.00 0.00 3.51
509 989 5.599999 AATTAGTTACGGATGCTCTGACT 57.400 39.130 0.00 0.00 0.00 3.41
510 990 5.599999 ATTAGTTACGGATGCTCTGACTT 57.400 39.130 0.00 0.00 0.00 3.01
511 991 3.963428 AGTTACGGATGCTCTGACTTT 57.037 42.857 0.00 0.00 0.00 2.66
512 992 4.273148 AGTTACGGATGCTCTGACTTTT 57.727 40.909 0.00 0.00 0.00 2.27
513 993 4.642429 AGTTACGGATGCTCTGACTTTTT 58.358 39.130 0.00 0.00 0.00 1.94
536 1016 1.100510 TGACGTACGCTCTGCCTTAT 58.899 50.000 16.72 0.00 0.00 1.73
552 1032 4.599047 CCTTATGAAGGCTCTACTGGAG 57.401 50.000 0.00 0.00 42.78 3.86
553 1033 3.964031 CCTTATGAAGGCTCTACTGGAGT 59.036 47.826 0.00 0.00 42.78 3.85
554 1034 5.141182 CCTTATGAAGGCTCTACTGGAGTA 58.859 45.833 0.00 0.00 42.78 2.59
556 1036 6.268847 CCTTATGAAGGCTCTACTGGAGTATT 59.731 42.308 0.00 0.00 42.78 1.89
557 1037 7.451877 CCTTATGAAGGCTCTACTGGAGTATTA 59.548 40.741 0.00 0.00 42.78 0.98
558 1038 6.658188 ATGAAGGCTCTACTGGAGTATTAC 57.342 41.667 0.00 0.00 43.62 1.89
574 1062 4.481280 AGTATTACTACTCCCTCTGTCCCA 59.519 45.833 0.00 0.00 32.56 4.37
575 1063 4.561254 ATTACTACTCCCTCTGTCCCAT 57.439 45.455 0.00 0.00 0.00 4.00
584 1072 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
585 1073 7.313731 ACTCCCTCTGTCCCATAATATAAGAA 58.686 38.462 0.00 0.00 0.00 2.52
586 1074 7.235812 ACTCCCTCTGTCCCATAATATAAGAAC 59.764 40.741 0.00 0.00 0.00 3.01
589 1163 8.386264 CCCTCTGTCCCATAATATAAGAACATT 58.614 37.037 0.00 0.00 0.00 2.71
596 1170 9.051679 TCCCATAATATAAGAACATTTGTGACG 57.948 33.333 0.00 0.00 0.00 4.35
598 1172 9.864034 CCATAATATAAGAACATTTGTGACGAC 57.136 33.333 0.00 0.00 0.00 4.34
599 1173 9.567917 CATAATATAAGAACATTTGTGACGACG 57.432 33.333 0.00 0.00 0.00 5.12
603 1177 1.459592 GAACATTTGTGACGACGGAGG 59.540 52.381 0.00 0.00 0.00 4.30
606 1180 0.246635 ATTTGTGACGACGGAGGGAG 59.753 55.000 0.00 0.00 0.00 4.30
610 1184 1.101331 GTGACGACGGAGGGAGTAAT 58.899 55.000 0.00 0.00 0.00 1.89
611 1185 1.100510 TGACGACGGAGGGAGTAATG 58.899 55.000 0.00 0.00 0.00 1.90
612 1186 1.340308 TGACGACGGAGGGAGTAATGA 60.340 52.381 0.00 0.00 0.00 2.57
613 1187 1.955080 GACGACGGAGGGAGTAATGAT 59.045 52.381 0.00 0.00 0.00 2.45
614 1188 3.144506 GACGACGGAGGGAGTAATGATA 58.855 50.000 0.00 0.00 0.00 2.15
616 1190 3.956199 ACGACGGAGGGAGTAATGATAAA 59.044 43.478 0.00 0.00 0.00 1.40
618 1192 4.558898 CGACGGAGGGAGTAATGATAAAGG 60.559 50.000 0.00 0.00 0.00 3.11
620 1194 3.557264 CGGAGGGAGTAATGATAAAGGGC 60.557 52.174 0.00 0.00 0.00 5.19
655 1242 3.806591 GCATATCCATGTGCATGCC 57.193 52.632 16.68 7.25 43.34 4.40
657 1244 0.109458 CATATCCATGTGCATGCCGC 60.109 55.000 16.68 8.87 42.89 6.53
658 1245 1.579964 ATATCCATGTGCATGCCGCG 61.580 55.000 16.68 0.00 46.97 6.46
659 1246 2.939133 TATCCATGTGCATGCCGCGT 62.939 55.000 16.68 6.75 46.97 6.01
660 1247 4.840288 CCATGTGCATGCCGCGTG 62.840 66.667 16.68 18.08 46.97 5.34
661 1248 4.840288 CATGTGCATGCCGCGTGG 62.840 66.667 16.68 11.67 46.97 4.94
664 1251 4.759096 GTGCATGCCGCGTGGAAC 62.759 66.667 21.76 1.73 46.97 3.62
675 1262 1.063031 GCGTGGAACAACCTACGTAC 58.937 55.000 0.00 0.00 44.16 3.67
682 1269 3.725010 GGAACAACCTACGTACGTACGAG 60.725 52.174 44.32 34.22 42.85 4.18
683 1270 5.903712 GGAACAACCTACGTACGTACGAGA 61.904 50.000 44.32 31.52 42.85 4.04
684 1271 7.307847 GGAACAACCTACGTACGTACGAGAA 62.308 48.000 44.32 29.48 42.85 2.87
700 1287 0.099082 AGAAGAAGGACGCGATCGAC 59.901 55.000 21.57 9.43 39.41 4.20
719 1306 0.037975 CCACCAGCCAATGCAAAGTC 60.038 55.000 0.00 0.00 41.13 3.01
736 1323 3.438297 AGTCGATCACCAACCGAATAG 57.562 47.619 0.00 0.00 33.91 1.73
739 1326 1.860950 CGATCACCAACCGAATAGCAG 59.139 52.381 0.00 0.00 0.00 4.24
789 1376 0.671781 GATGCGTGCAGTGGACTCTT 60.672 55.000 13.27 2.95 0.00 2.85
872 1459 5.418676 TGTCTCTAATTGCGTTGATCATCA 58.581 37.500 0.00 0.00 0.00 3.07
888 1475 2.472488 TCATCAACGATCGATCAATGCG 59.528 45.455 24.34 13.42 0.00 4.73
915 1502 1.813513 ATATAAGCCAGCCATGCGTC 58.186 50.000 0.00 0.00 0.00 5.19
927 1514 1.377202 ATGCGTCGCCTGTTCCATT 60.377 52.632 15.88 0.00 0.00 3.16
932 1519 1.017387 GTCGCCTGTTCCATTCATCC 58.983 55.000 0.00 0.00 0.00 3.51
943 1530 5.074790 TGTTCCATTCATCCATCCATCCATA 59.925 40.000 0.00 0.00 0.00 2.74
944 1531 5.446260 TCCATTCATCCATCCATCCATAG 57.554 43.478 0.00 0.00 0.00 2.23
946 1533 5.191124 TCCATTCATCCATCCATCCATAGAG 59.809 44.000 0.00 0.00 0.00 2.43
948 1535 3.799719 TCATCCATCCATCCATAGAGCT 58.200 45.455 0.00 0.00 0.00 4.09
949 1536 3.518303 TCATCCATCCATCCATAGAGCTG 59.482 47.826 0.00 0.00 0.00 4.24
950 1537 3.264922 TCCATCCATCCATAGAGCTGA 57.735 47.619 0.00 0.00 0.00 4.26
952 1539 4.951603 TCCATCCATCCATAGAGCTGATA 58.048 43.478 0.00 0.00 0.00 2.15
953 1540 4.961099 TCCATCCATCCATAGAGCTGATAG 59.039 45.833 0.00 0.00 0.00 2.08
954 1541 4.443175 CCATCCATCCATAGAGCTGATAGC 60.443 50.000 0.00 0.00 42.84 2.97
1011 1601 3.650298 TTCAGGCATGGCAGCTCCC 62.650 63.158 22.64 0.00 34.17 4.30
1125 1715 1.707427 ACCAGGAAGAACATGAAGGCT 59.293 47.619 0.00 0.00 31.40 4.58
1597 2874 2.683933 CACCCTGACTACGGCCCT 60.684 66.667 0.00 0.00 0.00 5.19
1935 3223 8.313292 TGTGCTTGGATTGCTTTATTAAGATTT 58.687 29.630 0.00 0.00 32.92 2.17
2035 3326 7.121315 GGAATTACTGTAGATGTTGGCTTCTTT 59.879 37.037 0.00 0.00 32.34 2.52
2049 3340 2.991866 GCTTCTTTTGGCTTGATCTTGC 59.008 45.455 0.00 0.00 0.00 4.01
2056 3347 5.420725 TTTGGCTTGATCTTGCTCTACTA 57.579 39.130 9.62 0.00 0.00 1.82
2067 3358 2.666317 TGCTCTACTATGTGCTGCCTA 58.334 47.619 0.00 0.00 0.00 3.93
2077 3368 2.841215 TGTGCTGCCTACGTTTAGTTT 58.159 42.857 0.00 0.00 0.00 2.66
2080 3371 5.722263 TGTGCTGCCTACGTTTAGTTTATA 58.278 37.500 0.00 0.00 0.00 0.98
2087 3378 8.041829 TGCCTACGTTTAGTTTATATTTTGCA 57.958 30.769 0.00 0.00 0.00 4.08
2088 3379 7.964011 TGCCTACGTTTAGTTTATATTTTGCAC 59.036 33.333 0.00 0.00 0.00 4.57
2117 3408 7.437862 TGTTTGAGGCTTGCTTTTACTTTTATG 59.562 33.333 0.00 0.00 0.00 1.90
2118 3409 5.469479 TGAGGCTTGCTTTTACTTTTATGC 58.531 37.500 0.00 0.00 0.00 3.14
2156 3449 3.717842 ACAATAACTGTGTGGCGGT 57.282 47.368 0.00 0.00 36.69 5.68
2173 3466 5.176774 GTGGCGGTTTCTTTAATGGAAAAAG 59.823 40.000 5.93 0.00 34.97 2.27
2174 3467 4.688879 GGCGGTTTCTTTAATGGAAAAAGG 59.311 41.667 5.93 1.95 34.97 3.11
2181 3474 9.168451 GTTTCTTTAATGGAAAAAGGGTTTTGA 57.832 29.630 5.93 0.00 37.07 2.69
2185 3478 9.119418 CTTTAATGGAAAAAGGGTTTTGACATT 57.881 29.630 14.05 14.05 40.45 2.71
2189 3482 5.182487 GGAAAAAGGGTTTTGACATTGTGT 58.818 37.500 0.00 0.00 37.07 3.72
2191 3484 6.989759 GGAAAAAGGGTTTTGACATTGTGTAT 59.010 34.615 0.00 0.00 37.07 2.29
2198 3491 6.640907 GGGTTTTGACATTGTGTATTTGTCTC 59.359 38.462 0.00 0.00 40.29 3.36
2200 3493 7.379529 GGTTTTGACATTGTGTATTTGTCTCAG 59.620 37.037 0.00 0.00 40.29 3.35
2203 3496 5.700832 TGACATTGTGTATTTGTCTCAGACC 59.299 40.000 1.24 0.00 40.29 3.85
2213 3506 8.321353 TGTATTTGTCTCAGACCATCATTACTT 58.679 33.333 1.24 0.00 0.00 2.24
2215 3508 7.672983 TTTGTCTCAGACCATCATTACTTTC 57.327 36.000 1.24 0.00 0.00 2.62
2219 3512 4.517285 TCAGACCATCATTACTTTCAGCC 58.483 43.478 0.00 0.00 0.00 4.85
2220 3513 3.310774 CAGACCATCATTACTTTCAGCCG 59.689 47.826 0.00 0.00 0.00 5.52
2221 3514 2.614057 GACCATCATTACTTTCAGCCGG 59.386 50.000 0.00 0.00 0.00 6.13
2223 3516 3.016736 CCATCATTACTTTCAGCCGGTT 58.983 45.455 1.90 0.00 0.00 4.44
2237 3530 1.882352 GCCGGTTTTCAGATCTGTGGT 60.882 52.381 21.92 0.00 0.00 4.16
2238 3531 2.076863 CCGGTTTTCAGATCTGTGGTC 58.923 52.381 21.92 11.29 0.00 4.02
2252 3545 2.874701 CTGTGGTCTGAAACTCAAGTGG 59.125 50.000 0.00 0.00 0.00 4.00
2253 3546 2.503765 TGTGGTCTGAAACTCAAGTGGA 59.496 45.455 0.00 0.00 0.00 4.02
2254 3547 2.872858 GTGGTCTGAAACTCAAGTGGAC 59.127 50.000 0.00 0.00 0.00 4.02
2263 3556 1.071385 ACTCAAGTGGACTTCAGGCAG 59.929 52.381 0.00 0.00 33.11 4.85
2293 3586 3.005554 GTGGATCTGTCATGGACAACTG 58.994 50.000 0.33 0.00 42.26 3.16
2297 3590 2.703416 TCTGTCATGGACAACTGATGC 58.297 47.619 0.33 0.00 42.26 3.91
2331 3624 4.935352 AAACAAAATTGCAGCTACCAGA 57.065 36.364 0.00 0.00 0.00 3.86
2358 3655 1.331756 GCATTCATACTGCCCGTTCTG 59.668 52.381 0.00 0.00 33.44 3.02
2359 3656 1.331756 CATTCATACTGCCCGTTCTGC 59.668 52.381 0.00 0.00 0.00 4.26
2374 3671 3.303395 CGTTCTGCTTGGACTTCTTTCAC 60.303 47.826 0.00 0.00 0.00 3.18
2382 3679 2.979678 TGGACTTCTTTCACCCTAAGCT 59.020 45.455 0.00 0.00 0.00 3.74
2387 3684 2.902608 TCTTTCACCCTAAGCTGGAGA 58.097 47.619 0.00 0.00 0.00 3.71
2394 3691 2.315155 ACCCTAAGCTGGAGAGGAACTA 59.685 50.000 5.93 0.00 41.55 2.24
2397 3694 2.930109 AAGCTGGAGAGGAACTAGGA 57.070 50.000 0.00 0.00 41.55 2.94
2399 3696 1.116308 GCTGGAGAGGAACTAGGACC 58.884 60.000 0.00 0.00 41.55 4.46
2400 3697 1.619977 GCTGGAGAGGAACTAGGACCA 60.620 57.143 9.53 0.00 41.55 4.02
2401 3698 2.104170 CTGGAGAGGAACTAGGACCAC 58.896 57.143 9.53 4.11 41.55 4.16
2403 3700 1.104630 GAGAGGAACTAGGACCACGG 58.895 60.000 9.53 0.00 41.55 4.94
2404 3701 0.408700 AGAGGAACTAGGACCACGGT 59.591 55.000 9.53 0.00 41.55 4.83
2405 3702 1.203149 AGAGGAACTAGGACCACGGTT 60.203 52.381 9.53 0.00 41.55 4.44
2406 3703 0.974383 AGGAACTAGGACCACGGTTG 59.026 55.000 9.53 0.00 36.02 3.77
2407 3704 0.672711 GGAACTAGGACCACGGTTGC 60.673 60.000 0.00 0.00 0.00 4.17
2408 3705 0.034337 GAACTAGGACCACGGTTGCA 59.966 55.000 0.00 0.00 0.00 4.08
2409 3706 0.470766 AACTAGGACCACGGTTGCAA 59.529 50.000 0.00 0.00 0.00 4.08
2410 3707 0.034896 ACTAGGACCACGGTTGCAAG 59.965 55.000 0.00 0.00 0.00 4.01
2411 3708 0.673644 CTAGGACCACGGTTGCAAGG 60.674 60.000 0.00 0.00 0.00 3.61
2412 3709 2.119484 TAGGACCACGGTTGCAAGGG 62.119 60.000 0.00 1.79 0.00 3.95
2413 3710 3.670377 GACCACGGTTGCAAGGGC 61.670 66.667 0.00 0.00 41.68 5.19
2416 3713 2.990967 CACGGTTGCAAGGGCCAT 60.991 61.111 6.18 0.00 40.13 4.40
2417 3714 2.990967 ACGGTTGCAAGGGCCATG 60.991 61.111 6.18 4.98 40.13 3.66
2418 3715 3.762247 CGGTTGCAAGGGCCATGG 61.762 66.667 11.23 7.63 40.13 3.66
2419 3716 4.086547 GGTTGCAAGGGCCATGGC 62.087 66.667 29.47 29.47 40.13 4.40
2430 3727 3.957288 GCCATGGCCCGATAATACT 57.043 52.632 27.24 0.00 34.56 2.12
2432 3729 2.629051 GCCATGGCCCGATAATACTAC 58.371 52.381 27.24 0.00 34.56 2.73
2433 3730 2.027561 GCCATGGCCCGATAATACTACA 60.028 50.000 27.24 0.00 34.56 2.74
2434 3731 3.596214 CCATGGCCCGATAATACTACAC 58.404 50.000 0.00 0.00 0.00 2.90
2435 3732 3.007506 CCATGGCCCGATAATACTACACA 59.992 47.826 0.00 0.00 0.00 3.72
2436 3733 3.738830 TGGCCCGATAATACTACACAC 57.261 47.619 0.00 0.00 0.00 3.82
2437 3734 3.032459 TGGCCCGATAATACTACACACA 58.968 45.455 0.00 0.00 0.00 3.72
2438 3735 3.181473 TGGCCCGATAATACTACACACAC 60.181 47.826 0.00 0.00 0.00 3.82
2439 3736 3.047796 GCCCGATAATACTACACACACG 58.952 50.000 0.00 0.00 0.00 4.49
2440 3737 3.635331 CCCGATAATACTACACACACGG 58.365 50.000 0.00 0.00 37.98 4.94
2441 3738 3.635331 CCGATAATACTACACACACGGG 58.365 50.000 0.00 0.00 35.24 5.28
2442 3739 3.047796 CGATAATACTACACACACGGGC 58.952 50.000 0.00 0.00 0.00 6.13
2443 3740 3.243301 CGATAATACTACACACACGGGCT 60.243 47.826 0.00 0.00 0.00 5.19
2444 3741 2.667473 AATACTACACACACGGGCTC 57.333 50.000 0.00 0.00 0.00 4.70
2445 3742 1.848652 ATACTACACACACGGGCTCT 58.151 50.000 0.00 0.00 0.00 4.09
2446 3743 1.171308 TACTACACACACGGGCTCTC 58.829 55.000 0.00 0.00 0.00 3.20
2447 3744 1.154016 CTACACACACGGGCTCTCG 60.154 63.158 0.00 0.00 0.00 4.04
2448 3745 3.277211 TACACACACGGGCTCTCGC 62.277 63.158 0.00 0.00 0.00 5.03
2457 3754 4.194720 GGCTCTCGCGACGGACAT 62.195 66.667 3.71 0.00 36.88 3.06
2458 3755 2.202623 GCTCTCGCGACGGACATT 60.203 61.111 3.71 0.00 0.00 2.71
2459 3756 2.224885 GCTCTCGCGACGGACATTC 61.225 63.158 3.71 0.00 0.00 2.67
2460 3757 1.136774 CTCTCGCGACGGACATTCA 59.863 57.895 3.71 0.00 0.00 2.57
2461 3758 1.134530 CTCTCGCGACGGACATTCAC 61.135 60.000 3.71 0.00 0.00 3.18
2462 3759 2.497092 CTCGCGACGGACATTCACG 61.497 63.158 3.71 0.00 0.00 4.35
2463 3760 3.541831 CGCGACGGACATTCACGG 61.542 66.667 0.00 0.00 0.00 4.94
2464 3761 2.126228 GCGACGGACATTCACGGA 60.126 61.111 0.00 0.00 0.00 4.69
2465 3762 2.442188 GCGACGGACATTCACGGAC 61.442 63.158 0.00 0.00 0.00 4.79
2466 3763 1.804326 CGACGGACATTCACGGACC 60.804 63.158 0.00 0.00 0.00 4.46
2467 3764 1.447314 GACGGACATTCACGGACCC 60.447 63.158 0.00 0.00 0.00 4.46
2468 3765 1.885163 GACGGACATTCACGGACCCT 61.885 60.000 0.00 0.00 0.00 4.34
2469 3766 1.153628 CGGACATTCACGGACCCTC 60.154 63.158 0.00 0.00 0.00 4.30
2470 3767 1.221021 GGACATTCACGGACCCTCC 59.779 63.158 0.00 0.00 0.00 4.30
2471 3768 1.265454 GGACATTCACGGACCCTCCT 61.265 60.000 0.00 0.00 33.30 3.69
2472 3769 0.108138 GACATTCACGGACCCTCCTG 60.108 60.000 0.00 0.00 33.30 3.86
2473 3770 1.450312 CATTCACGGACCCTCCTGC 60.450 63.158 0.00 0.00 33.30 4.85
2474 3771 3.019003 ATTCACGGACCCTCCTGCG 62.019 63.158 0.00 0.00 33.30 5.18
2475 3772 4.988716 TCACGGACCCTCCTGCGT 62.989 66.667 0.00 0.00 38.97 5.24
2482 3779 4.451150 CCCTCCTGCGTGCGCTTA 62.451 66.667 17.49 2.52 42.51 3.09
2483 3780 2.202932 CCTCCTGCGTGCGCTTAT 60.203 61.111 17.49 0.00 42.51 1.73
2484 3781 2.240500 CCTCCTGCGTGCGCTTATC 61.241 63.158 17.49 0.00 42.51 1.75
2485 3782 1.227089 CTCCTGCGTGCGCTTATCT 60.227 57.895 17.49 0.00 42.51 1.98
2486 3783 1.485838 CTCCTGCGTGCGCTTATCTG 61.486 60.000 17.49 0.00 42.51 2.90
2487 3784 1.519234 CCTGCGTGCGCTTATCTGA 60.519 57.895 17.49 0.00 42.51 3.27
2488 3785 0.877649 CCTGCGTGCGCTTATCTGAT 60.878 55.000 17.49 0.00 42.51 2.90
2489 3786 0.933097 CTGCGTGCGCTTATCTGATT 59.067 50.000 17.49 0.00 42.51 2.57
2490 3787 0.652071 TGCGTGCGCTTATCTGATTG 59.348 50.000 17.49 0.00 42.51 2.67
2491 3788 0.041839 GCGTGCGCTTATCTGATTGG 60.042 55.000 9.73 0.00 38.26 3.16
2492 3789 1.570813 CGTGCGCTTATCTGATTGGA 58.429 50.000 9.73 0.00 0.00 3.53
2493 3790 1.258982 CGTGCGCTTATCTGATTGGAC 59.741 52.381 9.73 0.00 0.00 4.02
2494 3791 1.599542 GTGCGCTTATCTGATTGGACC 59.400 52.381 9.73 0.00 0.00 4.46
2495 3792 1.230324 GCGCTTATCTGATTGGACCC 58.770 55.000 0.00 0.00 0.00 4.46
2496 3793 1.884235 CGCTTATCTGATTGGACCCC 58.116 55.000 0.00 0.00 0.00 4.95
2497 3794 1.543429 CGCTTATCTGATTGGACCCCC 60.543 57.143 0.00 0.00 0.00 5.40
2513 3810 1.488390 CCCCCTGATTTTCATGGGTG 58.512 55.000 14.39 5.10 46.93 4.61
2514 3811 1.488390 CCCCTGATTTTCATGGGTGG 58.512 55.000 9.09 0.00 44.38 4.61
2515 3812 1.488390 CCCTGATTTTCATGGGTGGG 58.512 55.000 0.00 0.00 33.17 4.61
2516 3813 0.826062 CCTGATTTTCATGGGTGGGC 59.174 55.000 0.00 0.00 0.00 5.36
2517 3814 0.826062 CTGATTTTCATGGGTGGGCC 59.174 55.000 0.00 0.00 0.00 5.80
2528 3825 4.699522 GTGGGCCCACCTCACGTC 62.700 72.222 40.65 16.46 40.79 4.34
2530 3827 3.717294 GGGCCCACCTCACGTCAT 61.717 66.667 19.95 0.00 35.85 3.06
2531 3828 2.125106 GGCCCACCTCACGTCATC 60.125 66.667 0.00 0.00 0.00 2.92
2532 3829 2.662596 GCCCACCTCACGTCATCA 59.337 61.111 0.00 0.00 0.00 3.07
2533 3830 1.003839 GCCCACCTCACGTCATCAA 60.004 57.895 0.00 0.00 0.00 2.57
2534 3831 0.605319 GCCCACCTCACGTCATCAAA 60.605 55.000 0.00 0.00 0.00 2.69
2535 3832 1.950484 GCCCACCTCACGTCATCAAAT 60.950 52.381 0.00 0.00 0.00 2.32
2536 3833 2.436417 CCCACCTCACGTCATCAAATT 58.564 47.619 0.00 0.00 0.00 1.82
2537 3834 2.819608 CCCACCTCACGTCATCAAATTT 59.180 45.455 0.00 0.00 0.00 1.82
2538 3835 3.119849 CCCACCTCACGTCATCAAATTTC 60.120 47.826 0.00 0.00 0.00 2.17
2539 3836 3.501828 CCACCTCACGTCATCAAATTTCA 59.498 43.478 0.00 0.00 0.00 2.69
2540 3837 4.023279 CCACCTCACGTCATCAAATTTCAA 60.023 41.667 0.00 0.00 0.00 2.69
2541 3838 4.911610 CACCTCACGTCATCAAATTTCAAC 59.088 41.667 0.00 0.00 0.00 3.18
2542 3839 4.023193 ACCTCACGTCATCAAATTTCAACC 60.023 41.667 0.00 0.00 0.00 3.77
2543 3840 4.023279 CCTCACGTCATCAAATTTCAACCA 60.023 41.667 0.00 0.00 0.00 3.67
2544 3841 5.506686 TCACGTCATCAAATTTCAACCAA 57.493 34.783 0.00 0.00 0.00 3.67
2545 3842 6.083098 TCACGTCATCAAATTTCAACCAAT 57.917 33.333 0.00 0.00 0.00 3.16
2546 3843 6.148948 TCACGTCATCAAATTTCAACCAATC 58.851 36.000 0.00 0.00 0.00 2.67
2547 3844 5.919707 CACGTCATCAAATTTCAACCAATCA 59.080 36.000 0.00 0.00 0.00 2.57
2548 3845 5.920273 ACGTCATCAAATTTCAACCAATCAC 59.080 36.000 0.00 0.00 0.00 3.06
2549 3846 5.919707 CGTCATCAAATTTCAACCAATCACA 59.080 36.000 0.00 0.00 0.00 3.58
2550 3847 6.129115 CGTCATCAAATTTCAACCAATCACAC 60.129 38.462 0.00 0.00 0.00 3.82
2551 3848 6.700960 GTCATCAAATTTCAACCAATCACACA 59.299 34.615 0.00 0.00 0.00 3.72
2552 3849 7.385752 GTCATCAAATTTCAACCAATCACACAT 59.614 33.333 0.00 0.00 0.00 3.21
2553 3850 7.932491 TCATCAAATTTCAACCAATCACACATT 59.068 29.630 0.00 0.00 0.00 2.71
2554 3851 9.205719 CATCAAATTTCAACCAATCACACATTA 57.794 29.630 0.00 0.00 0.00 1.90
2555 3852 9.775854 ATCAAATTTCAACCAATCACACATTAA 57.224 25.926 0.00 0.00 0.00 1.40
2556 3853 9.039870 TCAAATTTCAACCAATCACACATTAAC 57.960 29.630 0.00 0.00 0.00 2.01
2557 3854 8.824781 CAAATTTCAACCAATCACACATTAACA 58.175 29.630 0.00 0.00 0.00 2.41
2558 3855 8.954950 AATTTCAACCAATCACACATTAACAA 57.045 26.923 0.00 0.00 0.00 2.83
2559 3856 7.763172 TTTCAACCAATCACACATTAACAAC 57.237 32.000 0.00 0.00 0.00 3.32
2560 3857 5.837437 TCAACCAATCACACATTAACAACC 58.163 37.500 0.00 0.00 0.00 3.77
2561 3858 4.864704 ACCAATCACACATTAACAACCC 57.135 40.909 0.00 0.00 0.00 4.11
2562 3859 3.576550 ACCAATCACACATTAACAACCCC 59.423 43.478 0.00 0.00 0.00 4.95
2563 3860 3.366883 CCAATCACACATTAACAACCCCG 60.367 47.826 0.00 0.00 0.00 5.73
2564 3861 2.642154 TCACACATTAACAACCCCGT 57.358 45.000 0.00 0.00 0.00 5.28
2565 3862 3.766068 TCACACATTAACAACCCCGTA 57.234 42.857 0.00 0.00 0.00 4.02
2566 3863 4.082665 TCACACATTAACAACCCCGTAA 57.917 40.909 0.00 0.00 0.00 3.18
2567 3864 4.458397 TCACACATTAACAACCCCGTAAA 58.542 39.130 0.00 0.00 0.00 2.01
2568 3865 4.275443 TCACACATTAACAACCCCGTAAAC 59.725 41.667 0.00 0.00 0.00 2.01
2569 3866 3.569277 ACACATTAACAACCCCGTAAACC 59.431 43.478 0.00 0.00 0.00 3.27
2570 3867 3.057386 CACATTAACAACCCCGTAAACCC 60.057 47.826 0.00 0.00 0.00 4.11
2571 3868 2.284754 TTAACAACCCCGTAAACCCC 57.715 50.000 0.00 0.00 0.00 4.95
2572 3869 0.403655 TAACAACCCCGTAAACCCCC 59.596 55.000 0.00 0.00 0.00 5.40
2588 3885 1.148498 CCCCCTAGAAATCCCGTGC 59.852 63.158 0.00 0.00 0.00 5.34
2589 3886 1.227556 CCCCTAGAAATCCCGTGCG 60.228 63.158 0.00 0.00 0.00 5.34
2590 3887 1.520666 CCCTAGAAATCCCGTGCGT 59.479 57.895 0.00 0.00 0.00 5.24
2591 3888 0.529992 CCCTAGAAATCCCGTGCGTC 60.530 60.000 0.00 0.00 0.00 5.19
2592 3889 0.460311 CCTAGAAATCCCGTGCGTCT 59.540 55.000 0.00 0.00 0.00 4.18
2593 3890 1.679680 CCTAGAAATCCCGTGCGTCTA 59.320 52.381 0.00 0.00 0.00 2.59
2594 3891 2.287668 CCTAGAAATCCCGTGCGTCTAG 60.288 54.545 0.00 8.35 38.24 2.43
2605 3902 4.933483 CGTCTAGCATCTCTCGCC 57.067 61.111 0.00 0.00 0.00 5.54
2606 3903 2.025719 CGTCTAGCATCTCTCGCCA 58.974 57.895 0.00 0.00 0.00 5.69
2607 3904 0.595588 CGTCTAGCATCTCTCGCCAT 59.404 55.000 0.00 0.00 0.00 4.40
2608 3905 1.665448 CGTCTAGCATCTCTCGCCATG 60.665 57.143 0.00 0.00 0.00 3.66
2609 3906 0.964700 TCTAGCATCTCTCGCCATGG 59.035 55.000 7.63 7.63 0.00 3.66
2610 3907 0.669932 CTAGCATCTCTCGCCATGGC 60.670 60.000 27.67 27.67 37.85 4.40
2611 3908 2.104572 TAGCATCTCTCGCCATGGCC 62.105 60.000 30.79 13.96 37.98 5.36
2612 3909 2.281345 CATCTCTCGCCATGGCCC 60.281 66.667 30.79 5.10 37.98 5.80
2613 3910 3.933722 ATCTCTCGCCATGGCCCG 61.934 66.667 30.79 20.96 37.98 6.13
2621 3918 4.047125 CCATGGCCCGGTCCAACT 62.047 66.667 9.03 0.00 39.96 3.16
2622 3919 2.438434 CATGGCCCGGTCCAACTC 60.438 66.667 9.03 0.00 39.96 3.01
2623 3920 2.933287 ATGGCCCGGTCCAACTCA 60.933 61.111 9.03 0.00 39.96 3.41
2624 3921 2.534396 ATGGCCCGGTCCAACTCAA 61.534 57.895 9.03 0.00 39.96 3.02
2625 3922 2.359975 GGCCCGGTCCAACTCAAG 60.360 66.667 0.00 0.00 0.00 3.02
2626 3923 2.430367 GCCCGGTCCAACTCAAGT 59.570 61.111 0.00 0.00 0.00 3.16
2627 3924 1.675219 GCCCGGTCCAACTCAAGTA 59.325 57.895 0.00 0.00 0.00 2.24
2628 3925 0.672711 GCCCGGTCCAACTCAAGTAC 60.673 60.000 0.00 0.00 0.00 2.73
2629 3926 0.974383 CCCGGTCCAACTCAAGTACT 59.026 55.000 0.00 0.00 0.00 2.73
2630 3927 1.346722 CCCGGTCCAACTCAAGTACTT 59.653 52.381 1.12 1.12 0.00 2.24
2631 3928 2.413837 CCGGTCCAACTCAAGTACTTG 58.586 52.381 26.60 26.60 41.71 3.16
2632 3929 2.036733 CCGGTCCAACTCAAGTACTTGA 59.963 50.000 31.11 31.11 46.27 3.02
2639 3936 3.173852 TCAAGTACTTGAGGGGGCA 57.826 52.632 30.07 10.15 43.90 5.36
2640 3937 1.668826 TCAAGTACTTGAGGGGGCAT 58.331 50.000 30.07 0.00 43.90 4.40
2641 3938 2.840511 TCAAGTACTTGAGGGGGCATA 58.159 47.619 30.07 8.75 43.90 3.14
2642 3939 3.393687 TCAAGTACTTGAGGGGGCATAT 58.606 45.455 30.07 0.00 43.90 1.78
2643 3940 3.785887 TCAAGTACTTGAGGGGGCATATT 59.214 43.478 30.07 0.00 43.90 1.28
2644 3941 4.229582 TCAAGTACTTGAGGGGGCATATTT 59.770 41.667 30.07 0.00 43.90 1.40
2645 3942 4.170468 AGTACTTGAGGGGGCATATTTG 57.830 45.455 0.00 0.00 0.00 2.32
2646 3943 2.459555 ACTTGAGGGGGCATATTTGG 57.540 50.000 0.00 0.00 0.00 3.28
2657 3954 3.874392 GCATATTTGGCCTGAACTGTT 57.126 42.857 3.32 0.00 0.00 3.16
2658 3955 3.514645 GCATATTTGGCCTGAACTGTTG 58.485 45.455 3.32 0.00 0.00 3.33
2659 3956 3.193267 GCATATTTGGCCTGAACTGTTGA 59.807 43.478 3.32 0.00 0.00 3.18
2660 3957 4.321899 GCATATTTGGCCTGAACTGTTGAA 60.322 41.667 3.32 0.00 0.00 2.69
2661 3958 5.404946 CATATTTGGCCTGAACTGTTGAAG 58.595 41.667 3.32 0.00 0.00 3.02
2662 3959 2.727123 TTGGCCTGAACTGTTGAAGA 57.273 45.000 3.32 0.00 0.00 2.87
2663 3960 1.967319 TGGCCTGAACTGTTGAAGAC 58.033 50.000 3.32 0.00 0.00 3.01
2664 3961 1.239347 GGCCTGAACTGTTGAAGACC 58.761 55.000 0.00 0.00 0.00 3.85
2665 3962 1.476833 GGCCTGAACTGTTGAAGACCA 60.477 52.381 0.00 0.00 0.00 4.02
2666 3963 2.297701 GCCTGAACTGTTGAAGACCAA 58.702 47.619 0.00 0.00 0.00 3.67
2667 3964 2.687935 GCCTGAACTGTTGAAGACCAAA 59.312 45.455 0.00 0.00 36.36 3.28
2668 3965 3.489229 GCCTGAACTGTTGAAGACCAAAC 60.489 47.826 0.00 0.00 36.36 2.93
2669 3966 3.694072 CCTGAACTGTTGAAGACCAAACA 59.306 43.478 0.00 0.00 36.36 2.83
2670 3967 4.339247 CCTGAACTGTTGAAGACCAAACAT 59.661 41.667 0.00 0.00 36.36 2.71
2671 3968 5.499139 TGAACTGTTGAAGACCAAACATC 57.501 39.130 0.00 0.00 36.36 3.06
2672 3969 4.946772 TGAACTGTTGAAGACCAAACATCA 59.053 37.500 0.00 0.00 36.36 3.07
2673 3970 5.417266 TGAACTGTTGAAGACCAAACATCAA 59.583 36.000 0.00 0.00 36.36 2.57
2674 3971 6.096705 TGAACTGTTGAAGACCAAACATCAAT 59.903 34.615 0.00 0.00 36.36 2.57
2675 3972 7.284261 TGAACTGTTGAAGACCAAACATCAATA 59.716 33.333 0.00 0.00 36.36 1.90
2676 3973 7.581213 ACTGTTGAAGACCAAACATCAATAA 57.419 32.000 0.00 0.00 36.36 1.40
2677 3974 7.425606 ACTGTTGAAGACCAAACATCAATAAC 58.574 34.615 0.00 0.00 36.36 1.89
2678 3975 7.068103 ACTGTTGAAGACCAAACATCAATAACA 59.932 33.333 0.00 0.00 36.36 2.41
2679 3976 7.424803 TGTTGAAGACCAAACATCAATAACAG 58.575 34.615 0.00 0.00 36.36 3.16
2680 3977 6.012658 TGAAGACCAAACATCAATAACAGC 57.987 37.500 0.00 0.00 0.00 4.40
2681 3978 5.769662 TGAAGACCAAACATCAATAACAGCT 59.230 36.000 0.00 0.00 0.00 4.24
2682 3979 5.633830 AGACCAAACATCAATAACAGCTG 57.366 39.130 13.48 13.48 0.00 4.24
2683 3980 4.460382 AGACCAAACATCAATAACAGCTGG 59.540 41.667 19.93 0.00 0.00 4.85
2684 3981 3.511146 ACCAAACATCAATAACAGCTGGG 59.489 43.478 19.93 6.96 0.00 4.45
2685 3982 3.514645 CAAACATCAATAACAGCTGGGC 58.485 45.455 19.93 0.00 0.00 5.36
2686 3983 2.512692 ACATCAATAACAGCTGGGCA 57.487 45.000 19.93 2.32 0.00 5.36
2687 3984 2.372264 ACATCAATAACAGCTGGGCAG 58.628 47.619 19.93 3.88 0.00 4.85
2688 3985 1.679680 CATCAATAACAGCTGGGCAGG 59.320 52.381 19.93 4.62 0.00 4.85
2689 3986 0.991146 TCAATAACAGCTGGGCAGGA 59.009 50.000 19.93 7.10 0.00 3.86
2690 3987 1.065199 TCAATAACAGCTGGGCAGGAG 60.065 52.381 19.93 1.62 0.00 3.69
2691 3988 1.065199 CAATAACAGCTGGGCAGGAGA 60.065 52.381 19.93 0.00 0.00 3.71
2692 3989 1.289160 ATAACAGCTGGGCAGGAGAA 58.711 50.000 19.93 0.00 0.00 2.87
2693 3990 0.324943 TAACAGCTGGGCAGGAGAAC 59.675 55.000 19.93 0.00 0.00 3.01
2694 3991 2.045536 CAGCTGGGCAGGAGAACC 60.046 66.667 5.57 0.00 0.00 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.030301 GCAAAACAAACACACTTTAGATACATT 57.970 29.630 0.00 0.00 0.00 2.71
47 48 7.378461 CGCAAAACAAACACACTTTAGATACAT 59.622 33.333 0.00 0.00 0.00 2.29
48 49 6.689241 CGCAAAACAAACACACTTTAGATACA 59.311 34.615 0.00 0.00 0.00 2.29
49 50 6.689669 ACGCAAAACAAACACACTTTAGATAC 59.310 34.615 0.00 0.00 0.00 2.24
50 51 6.787225 ACGCAAAACAAACACACTTTAGATA 58.213 32.000 0.00 0.00 0.00 1.98
51 52 5.646606 ACGCAAAACAAACACACTTTAGAT 58.353 33.333 0.00 0.00 0.00 1.98
52 53 5.049398 ACGCAAAACAAACACACTTTAGA 57.951 34.783 0.00 0.00 0.00 2.10
53 54 5.755330 AACGCAAAACAAACACACTTTAG 57.245 34.783 0.00 0.00 0.00 1.85
54 55 7.813852 ATAAACGCAAAACAAACACACTTTA 57.186 28.000 0.00 0.00 0.00 1.85
55 56 6.713792 ATAAACGCAAAACAAACACACTTT 57.286 29.167 0.00 0.00 0.00 2.66
56 57 6.529696 CAATAAACGCAAAACAAACACACTT 58.470 32.000 0.00 0.00 0.00 3.16
57 58 5.445275 GCAATAAACGCAAAACAAACACACT 60.445 36.000 0.00 0.00 0.00 3.55
58 59 4.721507 GCAATAAACGCAAAACAAACACAC 59.278 37.500 0.00 0.00 0.00 3.82
59 60 4.388773 TGCAATAAACGCAAAACAAACACA 59.611 33.333 0.00 0.00 36.17 3.72
60 61 4.721507 GTGCAATAAACGCAAAACAAACAC 59.278 37.500 0.00 0.00 41.97 3.32
61 62 4.490959 CGTGCAATAAACGCAAAACAAACA 60.491 37.500 0.00 0.00 41.97 2.83
62 63 3.950803 CGTGCAATAAACGCAAAACAAAC 59.049 39.130 0.00 0.00 41.97 2.93
63 64 3.000322 CCGTGCAATAAACGCAAAACAAA 60.000 39.130 0.00 0.00 41.97 2.83
64 65 2.535984 CCGTGCAATAAACGCAAAACAA 59.464 40.909 0.00 0.00 41.97 2.83
65 66 2.120232 CCGTGCAATAAACGCAAAACA 58.880 42.857 0.00 0.00 41.97 2.83
66 67 2.386249 TCCGTGCAATAAACGCAAAAC 58.614 42.857 0.00 0.00 41.97 2.43
67 68 2.776312 TCCGTGCAATAAACGCAAAA 57.224 40.000 0.00 0.00 41.97 2.44
68 69 2.983136 CAATCCGTGCAATAAACGCAAA 59.017 40.909 0.00 0.00 41.97 3.68
69 70 2.030717 ACAATCCGTGCAATAAACGCAA 60.031 40.909 0.00 0.00 41.97 4.85
70 71 1.537638 ACAATCCGTGCAATAAACGCA 59.462 42.857 0.00 0.00 39.69 5.24
71 72 2.159572 AGACAATCCGTGCAATAAACGC 60.160 45.455 0.00 0.00 39.69 4.84
72 73 3.124466 TGAGACAATCCGTGCAATAAACG 59.876 43.478 0.00 0.00 40.70 3.60
73 74 4.678509 TGAGACAATCCGTGCAATAAAC 57.321 40.909 0.00 0.00 0.00 2.01
74 75 4.438608 GCATGAGACAATCCGTGCAATAAA 60.439 41.667 0.00 0.00 38.04 1.40
75 76 3.065233 GCATGAGACAATCCGTGCAATAA 59.935 43.478 0.00 0.00 38.04 1.40
76 77 2.613595 GCATGAGACAATCCGTGCAATA 59.386 45.455 0.00 0.00 38.04 1.90
77 78 1.402968 GCATGAGACAATCCGTGCAAT 59.597 47.619 0.00 0.00 38.04 3.56
78 79 0.804364 GCATGAGACAATCCGTGCAA 59.196 50.000 0.00 0.00 38.04 4.08
79 80 0.321475 TGCATGAGACAATCCGTGCA 60.321 50.000 0.00 0.00 42.69 4.57
80 81 0.804364 TTGCATGAGACAATCCGTGC 59.196 50.000 0.00 0.00 38.40 5.34
81 82 1.201954 CGTTGCATGAGACAATCCGTG 60.202 52.381 0.00 0.00 0.00 4.94
82 83 1.078709 CGTTGCATGAGACAATCCGT 58.921 50.000 0.00 0.00 0.00 4.69
83 84 0.247814 GCGTTGCATGAGACAATCCG 60.248 55.000 0.00 0.00 0.00 4.18
84 85 1.089920 AGCGTTGCATGAGACAATCC 58.910 50.000 0.00 0.00 0.00 3.01
85 86 2.286294 CCTAGCGTTGCATGAGACAATC 59.714 50.000 0.00 0.00 0.00 2.67
86 87 2.283298 CCTAGCGTTGCATGAGACAAT 58.717 47.619 0.00 0.00 0.00 2.71
87 88 1.725641 CCTAGCGTTGCATGAGACAA 58.274 50.000 0.00 0.00 0.00 3.18
88 89 0.740868 GCCTAGCGTTGCATGAGACA 60.741 55.000 0.00 0.00 0.00 3.41
89 90 0.460987 AGCCTAGCGTTGCATGAGAC 60.461 55.000 0.00 0.00 0.00 3.36
90 91 1.067669 CTAGCCTAGCGTTGCATGAGA 59.932 52.381 0.00 0.00 0.00 3.27
91 92 1.067669 TCTAGCCTAGCGTTGCATGAG 59.932 52.381 0.00 0.00 0.00 2.90
92 93 1.067669 CTCTAGCCTAGCGTTGCATGA 59.932 52.381 0.00 0.00 0.00 3.07
93 94 1.202463 ACTCTAGCCTAGCGTTGCATG 60.202 52.381 0.00 0.00 0.00 4.06
94 95 1.115467 ACTCTAGCCTAGCGTTGCAT 58.885 50.000 0.00 0.00 0.00 3.96
95 96 0.895530 AACTCTAGCCTAGCGTTGCA 59.104 50.000 6.32 0.00 32.92 4.08
96 97 1.135083 TGAACTCTAGCCTAGCGTTGC 60.135 52.381 11.62 4.92 34.19 4.17
97 98 2.941453 TGAACTCTAGCCTAGCGTTG 57.059 50.000 11.62 0.00 34.19 4.10
98 99 3.447586 TCATTGAACTCTAGCCTAGCGTT 59.552 43.478 6.81 6.81 36.51 4.84
99 100 3.024547 TCATTGAACTCTAGCCTAGCGT 58.975 45.455 0.00 0.00 0.00 5.07
100 101 3.717400 TCATTGAACTCTAGCCTAGCG 57.283 47.619 0.00 0.00 0.00 4.26
101 102 7.306866 CGTTAATTCATTGAACTCTAGCCTAGC 60.307 40.741 0.15 0.00 0.00 3.42
102 103 7.169982 CCGTTAATTCATTGAACTCTAGCCTAG 59.830 40.741 0.15 0.00 0.00 3.02
103 104 6.984474 CCGTTAATTCATTGAACTCTAGCCTA 59.016 38.462 0.15 0.00 0.00 3.93
104 105 5.817816 CCGTTAATTCATTGAACTCTAGCCT 59.182 40.000 0.15 0.00 0.00 4.58
105 106 5.815740 TCCGTTAATTCATTGAACTCTAGCC 59.184 40.000 0.15 0.00 0.00 3.93
106 107 6.903883 TCCGTTAATTCATTGAACTCTAGC 57.096 37.500 0.15 0.00 0.00 3.42
107 108 8.703604 TCTTCCGTTAATTCATTGAACTCTAG 57.296 34.615 0.15 0.00 0.00 2.43
108 109 8.528643 TCTCTTCCGTTAATTCATTGAACTCTA 58.471 33.333 0.15 0.00 0.00 2.43
109 110 7.386851 TCTCTTCCGTTAATTCATTGAACTCT 58.613 34.615 0.15 0.00 0.00 3.24
110 111 7.332182 ACTCTCTTCCGTTAATTCATTGAACTC 59.668 37.037 0.15 0.00 0.00 3.01
111 112 7.118390 CACTCTCTTCCGTTAATTCATTGAACT 59.882 37.037 0.15 0.00 0.00 3.01
112 113 7.095187 ACACTCTCTTCCGTTAATTCATTGAAC 60.095 37.037 0.15 0.00 0.00 3.18
113 114 6.934645 ACACTCTCTTCCGTTAATTCATTGAA 59.065 34.615 0.75 0.75 0.00 2.69
114 115 6.368791 CACACTCTCTTCCGTTAATTCATTGA 59.631 38.462 0.00 0.00 0.00 2.57
115 116 6.537566 CACACTCTCTTCCGTTAATTCATTG 58.462 40.000 0.00 0.00 0.00 2.82
116 117 5.122396 GCACACTCTCTTCCGTTAATTCATT 59.878 40.000 0.00 0.00 0.00 2.57
117 118 4.631813 GCACACTCTCTTCCGTTAATTCAT 59.368 41.667 0.00 0.00 0.00 2.57
118 119 3.994392 GCACACTCTCTTCCGTTAATTCA 59.006 43.478 0.00 0.00 0.00 2.57
119 120 3.371285 GGCACACTCTCTTCCGTTAATTC 59.629 47.826 0.00 0.00 0.00 2.17
120 121 3.335579 GGCACACTCTCTTCCGTTAATT 58.664 45.455 0.00 0.00 0.00 1.40
121 122 2.354805 GGGCACACTCTCTTCCGTTAAT 60.355 50.000 0.00 0.00 0.00 1.40
122 123 1.001633 GGGCACACTCTCTTCCGTTAA 59.998 52.381 0.00 0.00 0.00 2.01
123 124 0.606604 GGGCACACTCTCTTCCGTTA 59.393 55.000 0.00 0.00 0.00 3.18
124 125 1.122019 AGGGCACACTCTCTTCCGTT 61.122 55.000 0.00 0.00 0.00 4.44
125 126 1.122019 AAGGGCACACTCTCTTCCGT 61.122 55.000 0.00 0.00 0.00 4.69
126 127 0.035458 AAAGGGCACACTCTCTTCCG 59.965 55.000 0.00 0.00 0.00 4.30
127 128 1.202818 ACAAAGGGCACACTCTCTTCC 60.203 52.381 0.00 0.00 0.00 3.46
128 129 1.876156 CACAAAGGGCACACTCTCTTC 59.124 52.381 0.00 0.00 0.00 2.87
129 130 1.212935 ACACAAAGGGCACACTCTCTT 59.787 47.619 0.00 0.00 0.00 2.85
130 131 0.839946 ACACAAAGGGCACACTCTCT 59.160 50.000 0.00 0.00 0.00 3.10
131 132 0.947244 CACACAAAGGGCACACTCTC 59.053 55.000 0.00 0.00 0.00 3.20
132 133 0.255890 ACACACAAAGGGCACACTCT 59.744 50.000 0.00 0.00 0.00 3.24
133 134 0.663153 GACACACAAAGGGCACACTC 59.337 55.000 0.00 0.00 0.00 3.51
134 135 1.095228 CGACACACAAAGGGCACACT 61.095 55.000 0.00 0.00 0.00 3.55
135 136 1.355210 CGACACACAAAGGGCACAC 59.645 57.895 0.00 0.00 0.00 3.82
136 137 1.078072 ACGACACACAAAGGGCACA 60.078 52.632 0.00 0.00 0.00 4.57
137 138 1.355210 CACGACACACAAAGGGCAC 59.645 57.895 0.00 0.00 0.00 5.01
138 139 1.821759 CCACGACACACAAAGGGCA 60.822 57.895 0.00 0.00 0.00 5.36
139 140 2.551912 CCCACGACACACAAAGGGC 61.552 63.158 0.00 0.00 0.00 5.19
140 141 1.896660 CCCCACGACACACAAAGGG 60.897 63.158 0.00 0.00 36.04 3.95
141 142 1.153046 ACCCCACGACACACAAAGG 60.153 57.895 0.00 0.00 0.00 3.11
142 143 0.462937 TGACCCCACGACACACAAAG 60.463 55.000 0.00 0.00 0.00 2.77
143 144 0.745128 GTGACCCCACGACACACAAA 60.745 55.000 0.00 0.00 35.06 2.83
144 145 1.153329 GTGACCCCACGACACACAA 60.153 57.895 0.00 0.00 35.06 3.33
145 146 2.502093 GTGACCCCACGACACACA 59.498 61.111 0.00 0.00 35.06 3.72
153 154 3.950397 TCAATGATGTAAGTGACCCCAC 58.050 45.455 0.00 0.00 43.50 4.61
154 155 4.649267 TTCAATGATGTAAGTGACCCCA 57.351 40.909 0.00 0.00 0.00 4.96
155 156 5.679638 GCAATTCAATGATGTAAGTGACCCC 60.680 44.000 0.00 0.00 0.00 4.95
156 157 5.126061 AGCAATTCAATGATGTAAGTGACCC 59.874 40.000 0.00 0.00 0.00 4.46
157 158 6.032094 CAGCAATTCAATGATGTAAGTGACC 58.968 40.000 0.00 0.00 32.22 4.02
158 159 6.845302 TCAGCAATTCAATGATGTAAGTGAC 58.155 36.000 0.00 0.00 37.91 3.67
159 160 7.451501 TTCAGCAATTCAATGATGTAAGTGA 57.548 32.000 0.00 0.00 37.91 3.41
176 177 1.152860 TTGCCGGTCCTTTCAGCAA 60.153 52.632 1.90 0.00 40.89 3.91
180 181 1.072505 GTCCTTGCCGGTCCTTTCA 59.927 57.895 1.90 0.00 0.00 2.69
186 187 1.153229 GTATGGGTCCTTGCCGGTC 60.153 63.158 1.90 0.00 0.00 4.79
189 190 2.203015 CCGTATGGGTCCTTGCCG 60.203 66.667 0.00 0.00 0.00 5.69
201 202 1.278127 CCCATAATTCGCCTCCCGTAT 59.722 52.381 0.00 0.00 38.35 3.06
204 205 0.179029 AACCCATAATTCGCCTCCCG 60.179 55.000 0.00 0.00 38.61 5.14
216 217 4.283978 TCCGTGTAAAGAACTGAACCCATA 59.716 41.667 0.00 0.00 0.00 2.74
227 228 0.963962 AGACCGCTCCGTGTAAAGAA 59.036 50.000 0.00 0.00 0.00 2.52
230 231 1.067635 GGTTAGACCGCTCCGTGTAAA 60.068 52.381 0.00 0.00 0.00 2.01
283 284 1.817099 CTGCATCGAGGGAACTGGC 60.817 63.158 0.00 0.00 44.43 4.85
293 294 3.023832 TGAGATAGACAACCTGCATCGA 58.976 45.455 0.00 0.00 0.00 3.59
295 296 3.462021 GGTGAGATAGACAACCTGCATC 58.538 50.000 0.00 0.00 0.00 3.91
329 330 6.884832 AGACGTAAGAATGAAATGGGTCATA 58.115 36.000 0.00 0.00 37.86 2.15
358 359 3.122297 GTCATCGAGCCTGATTCTTCTG 58.878 50.000 0.00 0.00 0.00 3.02
376 377 2.885113 CGGCCAGTCTCATCGTCA 59.115 61.111 2.24 0.00 0.00 4.35
380 381 1.520342 GAGTGCGGCCAGTCTCATC 60.520 63.158 2.24 0.00 38.20 2.92
383 384 2.948720 AAGGAGTGCGGCCAGTCTC 61.949 63.158 2.24 6.53 40.53 3.36
386 387 3.241530 TCAAGGAGTGCGGCCAGT 61.242 61.111 2.24 0.00 0.00 4.00
395 396 3.296854 TGGCGATAGTATGTCAAGGAGT 58.703 45.455 0.00 0.00 39.35 3.85
406 407 9.161629 CAATGTGGATATTATTTGGCGATAGTA 57.838 33.333 0.00 0.00 39.35 1.82
411 412 4.522405 CCCAATGTGGATATTATTTGGCGA 59.478 41.667 0.00 0.00 40.96 5.54
419 420 2.515853 TGGCACCCCAATGTGGATATTA 59.484 45.455 0.00 0.00 40.96 0.98
426 427 0.686224 ACAAATGGCACCCCAATGTG 59.314 50.000 0.00 0.00 46.14 3.21
434 435 1.210155 GCGAGTCACAAATGGCACC 59.790 57.895 0.00 0.00 30.46 5.01
438 439 1.393539 CGTTAGGCGAGTCACAAATGG 59.606 52.381 0.00 0.00 44.77 3.16
457 458 7.802720 TGTGTTTGATGATAAGATTTGTGTTCG 59.197 33.333 0.00 0.00 0.00 3.95
459 460 8.084073 CCTGTGTTTGATGATAAGATTTGTGTT 58.916 33.333 0.00 0.00 0.00 3.32
461 462 7.819644 TCCTGTGTTTGATGATAAGATTTGTG 58.180 34.615 0.00 0.00 0.00 3.33
475 476 6.289834 TCCGTAACTAATTTCCTGTGTTTGA 58.710 36.000 0.00 0.00 0.00 2.69
485 965 6.043411 AGTCAGAGCATCCGTAACTAATTTC 58.957 40.000 0.00 0.00 33.66 2.17
513 993 0.863144 GGCAGAGCGTACGTCAAAAA 59.137 50.000 17.90 0.00 0.00 1.94
514 994 0.032952 AGGCAGAGCGTACGTCAAAA 59.967 50.000 17.90 0.00 0.00 2.44
515 995 0.032952 AAGGCAGAGCGTACGTCAAA 59.967 50.000 17.90 0.00 0.00 2.69
516 996 0.883153 TAAGGCAGAGCGTACGTCAA 59.117 50.000 17.90 0.00 0.00 3.18
517 997 1.100510 ATAAGGCAGAGCGTACGTCA 58.899 50.000 17.90 0.00 0.00 4.35
518 998 1.065102 TCATAAGGCAGAGCGTACGTC 59.935 52.381 17.90 12.77 0.00 4.34
519 999 1.100510 TCATAAGGCAGAGCGTACGT 58.899 50.000 17.90 3.43 0.00 3.57
520 1000 2.120232 CTTCATAAGGCAGAGCGTACG 58.880 52.381 11.84 11.84 0.00 3.67
521 1001 2.474816 CCTTCATAAGGCAGAGCGTAC 58.525 52.381 0.00 0.00 42.78 3.67
550 1030 5.072055 GGGACAGAGGGAGTAGTAATACTC 58.928 50.000 19.64 19.64 44.23 2.59
551 1031 4.481280 TGGGACAGAGGGAGTAGTAATACT 59.519 45.833 1.76 1.76 0.00 2.12
552 1032 4.801164 TGGGACAGAGGGAGTAGTAATAC 58.199 47.826 0.00 0.00 0.00 1.89
571 1059 9.051679 TCGTCACAAATGTTCTTATATTATGGG 57.948 33.333 0.00 0.00 0.00 4.00
574 1062 8.761497 CCGTCGTCACAAATGTTCTTATATTAT 58.239 33.333 0.00 0.00 0.00 1.28
575 1063 7.975058 TCCGTCGTCACAAATGTTCTTATATTA 59.025 33.333 0.00 0.00 0.00 0.98
584 1072 1.508632 CCTCCGTCGTCACAAATGTT 58.491 50.000 0.00 0.00 0.00 2.71
585 1073 0.320421 CCCTCCGTCGTCACAAATGT 60.320 55.000 0.00 0.00 0.00 2.71
586 1074 0.037697 TCCCTCCGTCGTCACAAATG 60.038 55.000 0.00 0.00 0.00 2.32
589 1163 0.250858 TACTCCCTCCGTCGTCACAA 60.251 55.000 0.00 0.00 0.00 3.33
591 1165 1.101331 ATTACTCCCTCCGTCGTCAC 58.899 55.000 0.00 0.00 0.00 3.67
593 1167 1.386533 TCATTACTCCCTCCGTCGTC 58.613 55.000 0.00 0.00 0.00 4.20
595 1169 4.547532 CTTTATCATTACTCCCTCCGTCG 58.452 47.826 0.00 0.00 0.00 5.12
596 1170 4.262506 CCCTTTATCATTACTCCCTCCGTC 60.263 50.000 0.00 0.00 0.00 4.79
598 1172 3.557264 GCCCTTTATCATTACTCCCTCCG 60.557 52.174 0.00 0.00 0.00 4.63
599 1173 3.394606 TGCCCTTTATCATTACTCCCTCC 59.605 47.826 0.00 0.00 0.00 4.30
603 1177 5.408604 CGTACATGCCCTTTATCATTACTCC 59.591 44.000 0.00 0.00 0.00 3.85
606 1180 5.560183 GCACGTACATGCCCTTTATCATTAC 60.560 44.000 1.60 0.00 39.86 1.89
610 1184 2.285083 GCACGTACATGCCCTTTATCA 58.715 47.619 1.60 0.00 39.86 2.15
611 1185 2.285083 TGCACGTACATGCCCTTTATC 58.715 47.619 11.96 0.00 45.50 1.75
612 1186 2.411628 TGCACGTACATGCCCTTTAT 57.588 45.000 11.96 0.00 45.50 1.40
613 1187 2.013400 CATGCACGTACATGCCCTTTA 58.987 47.619 15.50 0.00 45.50 1.85
614 1188 0.810648 CATGCACGTACATGCCCTTT 59.189 50.000 15.50 0.00 45.50 3.11
616 1190 4.223800 CATGCACGTACATGCCCT 57.776 55.556 15.50 0.00 45.50 5.19
651 1238 2.457743 TAGGTTGTTCCACGCGGCAT 62.458 55.000 12.47 0.00 39.02 4.40
652 1239 3.166490 TAGGTTGTTCCACGCGGCA 62.166 57.895 12.47 0.00 39.02 5.69
653 1240 2.357760 TAGGTTGTTCCACGCGGC 60.358 61.111 12.47 0.00 39.02 6.53
654 1241 2.377310 CGTAGGTTGTTCCACGCGG 61.377 63.158 12.47 0.00 39.02 6.46
655 1242 0.387112 TACGTAGGTTGTTCCACGCG 60.387 55.000 3.53 3.53 41.11 6.01
657 1244 1.330306 CGTACGTAGGTTGTTCCACG 58.670 55.000 7.22 0.00 42.18 4.94
658 1245 2.422276 ACGTACGTAGGTTGTTCCAC 57.578 50.000 21.41 0.00 39.02 4.02
659 1246 2.095969 CGTACGTACGTAGGTTGTTCCA 60.096 50.000 33.95 7.86 44.13 3.53
660 1247 2.505866 CGTACGTACGTAGGTTGTTCC 58.494 52.381 33.95 16.08 44.13 3.62
675 1262 0.856490 CGCGTCCTTCTTCTCGTACG 60.856 60.000 9.53 9.53 0.00 3.67
682 1269 0.866483 GGTCGATCGCGTCCTTCTTC 60.866 60.000 11.09 0.00 41.54 2.87
683 1270 1.139095 GGTCGATCGCGTCCTTCTT 59.861 57.895 11.09 0.00 41.54 2.52
684 1271 2.044555 TGGTCGATCGCGTCCTTCT 61.045 57.895 11.09 0.00 44.41 2.85
700 1287 0.037975 GACTTTGCATTGGCTGGTGG 60.038 55.000 0.00 0.00 41.91 4.61
719 1306 1.860950 CTGCTATTCGGTTGGTGATCG 59.139 52.381 0.00 0.00 0.00 3.69
789 1376 5.387279 GCGAATTAAAACTCGGTTGATTCA 58.613 37.500 6.98 0.00 35.60 2.57
872 1459 1.794701 CATCCGCATTGATCGATCGTT 59.205 47.619 20.03 6.71 0.00 3.85
874 1461 0.094216 GCATCCGCATTGATCGATCG 59.906 55.000 20.03 9.36 38.36 3.69
877 1464 0.678950 TAGGCATCCGCATTGATCGA 59.321 50.000 0.00 0.00 41.24 3.59
927 1514 3.518303 CAGCTCTATGGATGGATGGATGA 59.482 47.826 0.00 0.00 0.00 2.92
932 1519 4.695396 GCTATCAGCTCTATGGATGGATG 58.305 47.826 0.00 0.00 38.45 3.51
946 1533 3.452474 CCTGTGTGAAGTAGCTATCAGC 58.548 50.000 0.00 0.00 42.84 4.26
948 1535 2.831526 TGCCTGTGTGAAGTAGCTATCA 59.168 45.455 0.00 0.00 0.00 2.15
949 1536 3.526931 TGCCTGTGTGAAGTAGCTATC 57.473 47.619 0.00 0.00 0.00 2.08
950 1537 3.261897 ACTTGCCTGTGTGAAGTAGCTAT 59.738 43.478 0.00 0.00 0.00 2.97
952 1539 1.417890 ACTTGCCTGTGTGAAGTAGCT 59.582 47.619 0.00 0.00 0.00 3.32
953 1540 1.884235 ACTTGCCTGTGTGAAGTAGC 58.116 50.000 0.00 0.00 0.00 3.58
961 1551 1.424638 ACTCCACTACTTGCCTGTGT 58.575 50.000 0.00 0.00 0.00 3.72
1011 1601 2.487428 CCGAGGACGAGTGCTCTG 59.513 66.667 19.66 11.49 44.54 3.35
1125 1715 2.038863 TACCCTTGAAGGCTTCCTCA 57.961 50.000 23.68 3.85 32.73 3.86
1481 2109 4.057428 GAGCAGGGTCGCTGACGT 62.057 66.667 20.35 4.01 44.01 4.34
1573 2201 1.219393 GTAGTCAGGGTGAGGCTGC 59.781 63.158 0.00 0.00 0.00 5.25
1903 3190 3.354948 AGCAATCCAAGCACACTGATA 57.645 42.857 0.00 0.00 0.00 2.15
1906 3193 2.806608 AAAGCAATCCAAGCACACTG 57.193 45.000 0.00 0.00 0.00 3.66
1935 3223 4.810790 ACAAAACACACACCGAAATTTCA 58.189 34.783 17.99 0.00 0.00 2.69
2005 3296 6.891908 AGCCAACATCTACAGTAATTCCATTT 59.108 34.615 0.00 0.00 0.00 2.32
2019 3310 3.766545 AGCCAAAAGAAGCCAACATCTA 58.233 40.909 0.00 0.00 0.00 1.98
2035 3326 3.988976 AGTAGAGCAAGATCAAGCCAA 57.011 42.857 5.86 0.00 0.00 4.52
2049 3340 2.619177 ACGTAGGCAGCACATAGTAGAG 59.381 50.000 0.00 0.00 0.00 2.43
2056 3347 2.762535 ACTAAACGTAGGCAGCACAT 57.237 45.000 0.00 0.00 0.00 3.21
2067 3358 9.685828 ACATTGTGCAAAATATAAACTAAACGT 57.314 25.926 0.65 0.00 0.00 3.99
2077 3368 6.934056 AGCCTCAAACATTGTGCAAAATATA 58.066 32.000 0.65 0.00 33.89 0.86
2080 3371 4.075963 AGCCTCAAACATTGTGCAAAAT 57.924 36.364 0.00 0.00 33.89 1.82
2087 3378 3.825143 AAAGCAAGCCTCAAACATTGT 57.175 38.095 0.00 0.00 0.00 2.71
2088 3379 5.291971 AGTAAAAGCAAGCCTCAAACATTG 58.708 37.500 0.00 0.00 0.00 2.82
2096 3387 5.714047 AGCATAAAAGTAAAAGCAAGCCTC 58.286 37.500 0.00 0.00 0.00 4.70
2156 3449 9.168451 GTCAAAACCCTTTTTCCATTAAAGAAA 57.832 29.630 0.00 1.07 35.16 2.52
2173 3466 6.512297 AGACAAATACACAATGTCAAAACCC 58.488 36.000 7.75 0.00 44.55 4.11
2174 3467 7.199766 TGAGACAAATACACAATGTCAAAACC 58.800 34.615 7.75 0.00 44.55 3.27
2181 3474 5.620206 TGGTCTGAGACAAATACACAATGT 58.380 37.500 15.33 0.00 33.68 2.71
2185 3478 5.482163 TGATGGTCTGAGACAAATACACA 57.518 39.130 15.33 1.39 33.68 3.72
2189 3482 9.383519 GAAAGTAATGATGGTCTGAGACAAATA 57.616 33.333 15.33 0.00 33.68 1.40
2191 3484 7.223584 TGAAAGTAATGATGGTCTGAGACAAA 58.776 34.615 15.33 2.11 33.68 2.83
2198 3491 3.310774 CGGCTGAAAGTAATGATGGTCTG 59.689 47.826 0.00 0.00 35.30 3.51
2200 3493 2.614057 CCGGCTGAAAGTAATGATGGTC 59.386 50.000 0.00 0.00 35.30 4.02
2203 3496 4.701956 AAACCGGCTGAAAGTAATGATG 57.298 40.909 0.00 0.00 35.30 3.07
2213 3506 2.224523 ACAGATCTGAAAACCGGCTGAA 60.225 45.455 29.27 0.00 0.00 3.02
2215 3508 1.466167 CACAGATCTGAAAACCGGCTG 59.534 52.381 29.27 9.58 0.00 4.85
2219 3512 2.738846 CAGACCACAGATCTGAAAACCG 59.261 50.000 29.27 9.29 45.46 4.44
2237 3530 4.443457 CCTGAAGTCCACTTGAGTTTCAGA 60.443 45.833 18.20 0.00 42.75 3.27
2238 3531 3.812053 CCTGAAGTCCACTTGAGTTTCAG 59.188 47.826 12.90 12.90 41.32 3.02
2252 3545 0.819259 TTGCACACCTGCCTGAAGTC 60.819 55.000 0.00 0.00 43.51 3.01
2253 3546 0.820891 CTTGCACACCTGCCTGAAGT 60.821 55.000 0.00 0.00 43.51 3.01
2254 3547 0.820891 ACTTGCACACCTGCCTGAAG 60.821 55.000 0.00 0.00 43.51 3.02
2263 3556 1.160137 GACAGATCCACTTGCACACC 58.840 55.000 0.00 0.00 0.00 4.16
2272 3565 3.005554 CAGTTGTCCATGACAGATCCAC 58.994 50.000 0.00 0.00 43.69 4.02
2293 3586 6.542574 TTTGTTTTTGACATGAATGGCATC 57.457 33.333 0.00 0.00 46.90 3.91
2297 3590 7.194278 TGCAATTTTGTTTTTGACATGAATGG 58.806 30.769 0.00 0.00 38.26 3.16
2331 3624 3.418995 GGGCAGTATGAATGCATGATCT 58.581 45.455 0.00 0.00 45.68 2.75
2358 3655 2.278332 AGGGTGAAAGAAGTCCAAGC 57.722 50.000 0.00 0.00 0.00 4.01
2359 3656 3.753797 GCTTAGGGTGAAAGAAGTCCAAG 59.246 47.826 0.00 0.00 0.00 3.61
2374 3671 1.872773 AGTTCCTCTCCAGCTTAGGG 58.127 55.000 0.00 0.00 0.00 3.53
2382 3679 1.616187 CGTGGTCCTAGTTCCTCTCCA 60.616 57.143 0.00 0.00 0.00 3.86
2387 3684 0.974383 CAACCGTGGTCCTAGTTCCT 59.026 55.000 0.00 0.00 0.00 3.36
2394 3691 2.113139 CCTTGCAACCGTGGTCCT 59.887 61.111 0.00 0.00 0.00 3.85
2399 3696 2.990967 ATGGCCCTTGCAACCGTG 60.991 61.111 0.00 0.00 40.13 4.94
2400 3697 2.990967 CATGGCCCTTGCAACCGT 60.991 61.111 0.00 0.00 40.13 4.83
2401 3698 3.762247 CCATGGCCCTTGCAACCG 61.762 66.667 0.00 0.00 40.13 4.44
2412 3709 2.027561 TGTAGTATTATCGGGCCATGGC 60.028 50.000 29.47 29.47 41.06 4.40
2413 3710 3.007506 TGTGTAGTATTATCGGGCCATGG 59.992 47.826 7.63 7.63 0.00 3.66
2414 3711 3.994392 GTGTGTAGTATTATCGGGCCATG 59.006 47.826 4.39 0.00 0.00 3.66
2415 3712 3.644265 TGTGTGTAGTATTATCGGGCCAT 59.356 43.478 4.39 0.00 0.00 4.40
2416 3713 3.032459 TGTGTGTAGTATTATCGGGCCA 58.968 45.455 4.39 0.00 0.00 5.36
2417 3714 3.387397 GTGTGTGTAGTATTATCGGGCC 58.613 50.000 0.00 0.00 0.00 5.80
2418 3715 3.047796 CGTGTGTGTAGTATTATCGGGC 58.952 50.000 0.00 0.00 0.00 6.13
2419 3716 3.551454 CCCGTGTGTGTAGTATTATCGGG 60.551 52.174 0.00 0.00 46.70 5.14
2420 3717 3.635331 CCCGTGTGTGTAGTATTATCGG 58.365 50.000 0.00 0.00 36.00 4.18
2421 3718 3.047796 GCCCGTGTGTGTAGTATTATCG 58.952 50.000 0.00 0.00 0.00 2.92
2422 3719 4.037684 AGAGCCCGTGTGTGTAGTATTATC 59.962 45.833 0.00 0.00 0.00 1.75
2423 3720 3.958798 AGAGCCCGTGTGTGTAGTATTAT 59.041 43.478 0.00 0.00 0.00 1.28
2424 3721 3.359033 AGAGCCCGTGTGTGTAGTATTA 58.641 45.455 0.00 0.00 0.00 0.98
2425 3722 2.165845 GAGAGCCCGTGTGTGTAGTATT 59.834 50.000 0.00 0.00 0.00 1.89
2426 3723 1.749634 GAGAGCCCGTGTGTGTAGTAT 59.250 52.381 0.00 0.00 0.00 2.12
2427 3724 1.171308 GAGAGCCCGTGTGTGTAGTA 58.829 55.000 0.00 0.00 0.00 1.82
2428 3725 1.863662 CGAGAGCCCGTGTGTGTAGT 61.864 60.000 0.00 0.00 0.00 2.73
2429 3726 1.154016 CGAGAGCCCGTGTGTGTAG 60.154 63.158 0.00 0.00 0.00 2.74
2430 3727 2.959372 CGAGAGCCCGTGTGTGTA 59.041 61.111 0.00 0.00 0.00 2.90
2442 3739 1.134530 GTGAATGTCCGTCGCGAGAG 61.135 60.000 10.24 6.82 43.49 3.20
2443 3740 1.154093 GTGAATGTCCGTCGCGAGA 60.154 57.895 10.24 0.02 38.16 4.04
2444 3741 3.374330 GTGAATGTCCGTCGCGAG 58.626 61.111 10.24 3.49 0.00 5.03
2446 3743 3.541831 CCGTGAATGTCCGTCGCG 61.542 66.667 0.00 0.00 46.03 5.87
2447 3744 2.126228 TCCGTGAATGTCCGTCGC 60.126 61.111 0.00 0.00 0.00 5.19
2448 3745 1.804326 GGTCCGTGAATGTCCGTCG 60.804 63.158 0.00 0.00 0.00 5.12
2449 3746 1.447314 GGGTCCGTGAATGTCCGTC 60.447 63.158 0.00 0.00 0.00 4.79
2450 3747 1.885163 GAGGGTCCGTGAATGTCCGT 61.885 60.000 0.00 0.00 0.00 4.69
2451 3748 1.153628 GAGGGTCCGTGAATGTCCG 60.154 63.158 0.00 0.00 0.00 4.79
2452 3749 1.221021 GGAGGGTCCGTGAATGTCC 59.779 63.158 0.00 0.00 0.00 4.02
2453 3750 0.108138 CAGGAGGGTCCGTGAATGTC 60.108 60.000 0.00 0.00 42.75 3.06
2454 3751 1.983224 CAGGAGGGTCCGTGAATGT 59.017 57.895 0.00 0.00 42.75 2.71
2455 3752 1.450312 GCAGGAGGGTCCGTGAATG 60.450 63.158 0.00 0.00 42.75 2.67
2456 3753 2.990479 GCAGGAGGGTCCGTGAAT 59.010 61.111 0.00 0.00 42.75 2.57
2457 3754 3.691342 CGCAGGAGGGTCCGTGAA 61.691 66.667 0.00 0.00 42.75 3.18
2458 3755 4.988716 ACGCAGGAGGGTCCGTGA 62.989 66.667 0.00 0.00 42.75 4.35
2459 3756 4.742201 CACGCAGGAGGGTCCGTG 62.742 72.222 0.00 0.00 42.75 4.94
2465 3762 3.740128 ATAAGCGCACGCAGGAGGG 62.740 63.158 18.24 0.00 44.88 4.30
2466 3763 2.202932 ATAAGCGCACGCAGGAGG 60.203 61.111 18.24 0.00 44.88 4.30
2467 3764 1.227089 AGATAAGCGCACGCAGGAG 60.227 57.895 18.24 0.00 44.88 3.69
2468 3765 1.519234 CAGATAAGCGCACGCAGGA 60.519 57.895 18.24 1.80 44.88 3.86
2469 3766 0.877649 ATCAGATAAGCGCACGCAGG 60.878 55.000 18.24 0.00 44.88 4.85
2470 3767 0.933097 AATCAGATAAGCGCACGCAG 59.067 50.000 18.24 0.00 44.88 5.18
2471 3768 0.652071 CAATCAGATAAGCGCACGCA 59.348 50.000 18.24 0.00 44.88 5.24
2472 3769 0.041839 CCAATCAGATAAGCGCACGC 60.042 55.000 11.47 6.99 42.33 5.34
2473 3770 1.258982 GTCCAATCAGATAAGCGCACG 59.741 52.381 11.47 0.00 0.00 5.34
2474 3771 1.599542 GGTCCAATCAGATAAGCGCAC 59.400 52.381 11.47 0.00 0.00 5.34
2475 3772 1.475034 GGGTCCAATCAGATAAGCGCA 60.475 52.381 11.47 0.00 0.00 6.09
2476 3773 1.230324 GGGTCCAATCAGATAAGCGC 58.770 55.000 0.00 0.00 0.00 5.92
2477 3774 1.543429 GGGGGTCCAATCAGATAAGCG 60.543 57.143 0.00 0.00 0.00 4.68
2478 3775 2.278332 GGGGGTCCAATCAGATAAGC 57.722 55.000 0.00 0.00 0.00 3.09
2497 3794 0.826062 GCCCACCCATGAAAATCAGG 59.174 55.000 0.00 0.00 0.00 3.86
2498 3795 0.826062 GGCCCACCCATGAAAATCAG 59.174 55.000 0.00 0.00 0.00 2.90
2499 3796 2.989480 GGCCCACCCATGAAAATCA 58.011 52.632 0.00 0.00 0.00 2.57
2511 3808 4.699522 GACGTGAGGTGGGCCCAC 62.700 72.222 42.18 42.18 45.49 4.61
2513 3810 3.682292 GATGACGTGAGGTGGGCCC 62.682 68.421 17.59 17.59 34.57 5.80
2514 3811 2.125106 GATGACGTGAGGTGGGCC 60.125 66.667 0.00 0.00 0.00 5.80
2515 3812 0.605319 TTTGATGACGTGAGGTGGGC 60.605 55.000 0.00 0.00 0.00 5.36
2516 3813 2.113860 ATTTGATGACGTGAGGTGGG 57.886 50.000 0.00 0.00 0.00 4.61
2517 3814 3.501828 TGAAATTTGATGACGTGAGGTGG 59.498 43.478 0.00 0.00 0.00 4.61
2518 3815 4.747540 TGAAATTTGATGACGTGAGGTG 57.252 40.909 0.00 0.00 0.00 4.00
2519 3816 4.023193 GGTTGAAATTTGATGACGTGAGGT 60.023 41.667 0.00 0.00 0.00 3.85
2520 3817 4.023279 TGGTTGAAATTTGATGACGTGAGG 60.023 41.667 0.00 0.00 0.00 3.86
2521 3818 5.107109 TGGTTGAAATTTGATGACGTGAG 57.893 39.130 0.00 0.00 0.00 3.51
2522 3819 5.506686 TTGGTTGAAATTTGATGACGTGA 57.493 34.783 0.00 0.00 0.00 4.35
2523 3820 5.919707 TGATTGGTTGAAATTTGATGACGTG 59.080 36.000 0.00 0.00 0.00 4.49
2524 3821 5.920273 GTGATTGGTTGAAATTTGATGACGT 59.080 36.000 0.00 0.00 0.00 4.34
2525 3822 5.919707 TGTGATTGGTTGAAATTTGATGACG 59.080 36.000 0.00 0.00 0.00 4.35
2526 3823 6.700960 TGTGTGATTGGTTGAAATTTGATGAC 59.299 34.615 0.00 0.00 0.00 3.06
2527 3824 6.814043 TGTGTGATTGGTTGAAATTTGATGA 58.186 32.000 0.00 0.00 0.00 2.92
2528 3825 7.661127 ATGTGTGATTGGTTGAAATTTGATG 57.339 32.000 0.00 0.00 0.00 3.07
2529 3826 9.775854 TTAATGTGTGATTGGTTGAAATTTGAT 57.224 25.926 0.00 0.00 0.00 2.57
2530 3827 9.039870 GTTAATGTGTGATTGGTTGAAATTTGA 57.960 29.630 0.00 0.00 0.00 2.69
2531 3828 8.824781 TGTTAATGTGTGATTGGTTGAAATTTG 58.175 29.630 0.00 0.00 0.00 2.32
2532 3829 8.954950 TGTTAATGTGTGATTGGTTGAAATTT 57.045 26.923 0.00 0.00 0.00 1.82
2533 3830 8.825745 GTTGTTAATGTGTGATTGGTTGAAATT 58.174 29.630 0.00 0.00 0.00 1.82
2534 3831 7.440856 GGTTGTTAATGTGTGATTGGTTGAAAT 59.559 33.333 0.00 0.00 0.00 2.17
2535 3832 6.758886 GGTTGTTAATGTGTGATTGGTTGAAA 59.241 34.615 0.00 0.00 0.00 2.69
2536 3833 6.276847 GGTTGTTAATGTGTGATTGGTTGAA 58.723 36.000 0.00 0.00 0.00 2.69
2537 3834 5.221342 GGGTTGTTAATGTGTGATTGGTTGA 60.221 40.000 0.00 0.00 0.00 3.18
2538 3835 4.987912 GGGTTGTTAATGTGTGATTGGTTG 59.012 41.667 0.00 0.00 0.00 3.77
2539 3836 4.039852 GGGGTTGTTAATGTGTGATTGGTT 59.960 41.667 0.00 0.00 0.00 3.67
2540 3837 3.576550 GGGGTTGTTAATGTGTGATTGGT 59.423 43.478 0.00 0.00 0.00 3.67
2541 3838 3.366883 CGGGGTTGTTAATGTGTGATTGG 60.367 47.826 0.00 0.00 0.00 3.16
2542 3839 3.254657 ACGGGGTTGTTAATGTGTGATTG 59.745 43.478 0.00 0.00 0.00 2.67
2543 3840 3.492337 ACGGGGTTGTTAATGTGTGATT 58.508 40.909 0.00 0.00 0.00 2.57
2544 3841 3.149005 ACGGGGTTGTTAATGTGTGAT 57.851 42.857 0.00 0.00 0.00 3.06
2545 3842 2.642154 ACGGGGTTGTTAATGTGTGA 57.358 45.000 0.00 0.00 0.00 3.58
2546 3843 4.538917 GTTTACGGGGTTGTTAATGTGTG 58.461 43.478 0.00 0.00 0.00 3.82
2547 3844 3.569277 GGTTTACGGGGTTGTTAATGTGT 59.431 43.478 0.00 0.00 0.00 3.72
2548 3845 3.057386 GGGTTTACGGGGTTGTTAATGTG 60.057 47.826 0.00 0.00 0.00 3.21
2549 3846 3.156293 GGGTTTACGGGGTTGTTAATGT 58.844 45.455 0.00 0.00 0.00 2.71
2550 3847 2.492881 GGGGTTTACGGGGTTGTTAATG 59.507 50.000 0.00 0.00 0.00 1.90
2551 3848 2.557229 GGGGGTTTACGGGGTTGTTAAT 60.557 50.000 0.00 0.00 0.00 1.40
2552 3849 1.202989 GGGGGTTTACGGGGTTGTTAA 60.203 52.381 0.00 0.00 0.00 2.01
2553 3850 0.403655 GGGGGTTTACGGGGTTGTTA 59.596 55.000 0.00 0.00 0.00 2.41
2554 3851 1.153524 GGGGGTTTACGGGGTTGTT 59.846 57.895 0.00 0.00 0.00 2.83
2555 3852 2.845784 GGGGGTTTACGGGGTTGT 59.154 61.111 0.00 0.00 0.00 3.32
2570 3867 1.148498 GCACGGGATTTCTAGGGGG 59.852 63.158 0.00 0.00 0.00 5.40
2571 3868 1.227556 CGCACGGGATTTCTAGGGG 60.228 63.158 0.00 0.00 0.00 4.79
2572 3869 0.529992 GACGCACGGGATTTCTAGGG 60.530 60.000 0.00 0.00 0.00 3.53
2573 3870 0.460311 AGACGCACGGGATTTCTAGG 59.540 55.000 0.00 0.00 0.00 3.02
2574 3871 2.859032 GCTAGACGCACGGGATTTCTAG 60.859 54.545 11.41 11.41 39.12 2.43
2575 3872 1.066605 GCTAGACGCACGGGATTTCTA 59.933 52.381 0.00 0.00 38.92 2.10
2576 3873 0.179108 GCTAGACGCACGGGATTTCT 60.179 55.000 0.00 0.00 38.92 2.52
2577 3874 0.459585 TGCTAGACGCACGGGATTTC 60.460 55.000 0.00 0.00 45.47 2.17
2578 3875 1.594833 TGCTAGACGCACGGGATTT 59.405 52.632 0.00 0.00 45.47 2.17
2579 3876 3.294750 TGCTAGACGCACGGGATT 58.705 55.556 0.00 0.00 45.47 3.01
2587 3884 1.371145 GGCGAGAGATGCTAGACGC 60.371 63.158 0.00 0.00 44.18 5.19
2588 3885 0.595588 ATGGCGAGAGATGCTAGACG 59.404 55.000 0.00 0.00 28.24 4.18
2589 3886 1.336702 CCATGGCGAGAGATGCTAGAC 60.337 57.143 0.00 0.00 0.00 2.59
2590 3887 0.964700 CCATGGCGAGAGATGCTAGA 59.035 55.000 0.00 0.00 0.00 2.43
2591 3888 0.669932 GCCATGGCGAGAGATGCTAG 60.670 60.000 23.48 0.00 0.00 3.42
2592 3889 1.368950 GCCATGGCGAGAGATGCTA 59.631 57.895 23.48 0.00 0.00 3.49
2593 3890 2.110627 GCCATGGCGAGAGATGCT 59.889 61.111 23.48 0.00 0.00 3.79
2594 3891 2.976903 GGCCATGGCGAGAGATGC 60.977 66.667 29.90 10.13 43.06 3.91
2595 3892 2.281345 GGGCCATGGCGAGAGATG 60.281 66.667 29.90 0.00 43.06 2.90
2596 3893 3.933722 CGGGCCATGGCGAGAGAT 61.934 66.667 29.90 0.00 43.06 2.75
2604 3901 3.995506 GAGTTGGACCGGGCCATGG 62.996 68.421 34.77 7.63 37.86 3.66
2605 3902 2.438434 GAGTTGGACCGGGCCATG 60.438 66.667 34.77 0.00 37.86 3.66
2606 3903 2.484287 CTTGAGTTGGACCGGGCCAT 62.484 60.000 34.77 18.52 37.86 4.40
2607 3904 3.172106 TTGAGTTGGACCGGGCCA 61.172 61.111 30.39 30.39 35.78 5.36
2608 3905 1.833787 TACTTGAGTTGGACCGGGCC 61.834 60.000 23.70 23.70 0.00 5.80
2609 3906 0.672711 GTACTTGAGTTGGACCGGGC 60.673 60.000 6.32 0.21 0.00 6.13
2610 3907 0.974383 AGTACTTGAGTTGGACCGGG 59.026 55.000 6.32 0.00 0.00 5.73
2611 3908 2.036733 TCAAGTACTTGAGTTGGACCGG 59.963 50.000 30.07 0.00 43.90 5.28
2612 3909 3.380479 TCAAGTACTTGAGTTGGACCG 57.620 47.619 30.07 5.19 43.90 4.79
2621 3918 1.668826 ATGCCCCCTCAAGTACTTGA 58.331 50.000 31.11 31.11 46.27 3.02
2622 3919 3.864789 ATATGCCCCCTCAAGTACTTG 57.135 47.619 26.60 26.60 41.71 3.16
2623 3920 4.536765 CAAATATGCCCCCTCAAGTACTT 58.463 43.478 1.12 1.12 0.00 2.24
2624 3921 3.117512 CCAAATATGCCCCCTCAAGTACT 60.118 47.826 0.00 0.00 0.00 2.73
2625 3922 3.222603 CCAAATATGCCCCCTCAAGTAC 58.777 50.000 0.00 0.00 0.00 2.73
2626 3923 2.424234 GCCAAATATGCCCCCTCAAGTA 60.424 50.000 0.00 0.00 0.00 2.24
2627 3924 1.689258 GCCAAATATGCCCCCTCAAGT 60.689 52.381 0.00 0.00 0.00 3.16
2628 3925 1.043022 GCCAAATATGCCCCCTCAAG 58.957 55.000 0.00 0.00 0.00 3.02
2629 3926 0.398381 GGCCAAATATGCCCCCTCAA 60.398 55.000 0.00 0.00 43.33 3.02
2630 3927 1.232792 GGCCAAATATGCCCCCTCA 59.767 57.895 0.00 0.00 43.33 3.86
2631 3928 4.198087 GGCCAAATATGCCCCCTC 57.802 61.111 0.00 0.00 43.33 4.30
2637 3934 3.193267 TCAACAGTTCAGGCCAAATATGC 59.807 43.478 5.01 0.00 0.00 3.14
2638 3935 5.183713 TCTTCAACAGTTCAGGCCAAATATG 59.816 40.000 5.01 5.13 0.00 1.78
2639 3936 5.183904 GTCTTCAACAGTTCAGGCCAAATAT 59.816 40.000 5.01 0.00 0.00 1.28
2640 3937 4.518970 GTCTTCAACAGTTCAGGCCAAATA 59.481 41.667 5.01 0.00 0.00 1.40
2641 3938 3.319122 GTCTTCAACAGTTCAGGCCAAAT 59.681 43.478 5.01 0.00 0.00 2.32
2642 3939 2.687935 GTCTTCAACAGTTCAGGCCAAA 59.312 45.455 5.01 0.00 0.00 3.28
2643 3940 2.297701 GTCTTCAACAGTTCAGGCCAA 58.702 47.619 5.01 0.00 0.00 4.52
2644 3941 1.476833 GGTCTTCAACAGTTCAGGCCA 60.477 52.381 5.01 0.00 30.75 5.36
2645 3942 1.239347 GGTCTTCAACAGTTCAGGCC 58.761 55.000 0.00 0.00 0.00 5.19
2646 3943 1.967319 TGGTCTTCAACAGTTCAGGC 58.033 50.000 0.00 0.00 0.00 4.85
2647 3944 3.694072 TGTTTGGTCTTCAACAGTTCAGG 59.306 43.478 0.00 0.00 34.67 3.86
2648 3945 4.963276 TGTTTGGTCTTCAACAGTTCAG 57.037 40.909 0.00 0.00 34.67 3.02
2649 3946 4.946772 TGATGTTTGGTCTTCAACAGTTCA 59.053 37.500 0.00 0.00 34.67 3.18
2650 3947 5.499139 TGATGTTTGGTCTTCAACAGTTC 57.501 39.130 0.00 0.00 34.67 3.01
2651 3948 5.913137 TTGATGTTTGGTCTTCAACAGTT 57.087 34.783 0.00 0.00 34.67 3.16
2652 3949 7.068103 TGTTATTGATGTTTGGTCTTCAACAGT 59.932 33.333 0.00 0.00 35.44 3.55
2653 3950 7.424803 TGTTATTGATGTTTGGTCTTCAACAG 58.575 34.615 0.00 0.00 35.44 3.16
2654 3951 7.340122 TGTTATTGATGTTTGGTCTTCAACA 57.660 32.000 0.00 0.00 35.44 3.33
2655 3952 6.363357 GCTGTTATTGATGTTTGGTCTTCAAC 59.637 38.462 0.00 0.00 35.44 3.18
2656 3953 6.265196 AGCTGTTATTGATGTTTGGTCTTCAA 59.735 34.615 0.00 0.00 36.46 2.69
2657 3954 5.769662 AGCTGTTATTGATGTTTGGTCTTCA 59.230 36.000 0.00 0.00 0.00 3.02
2658 3955 6.088824 CAGCTGTTATTGATGTTTGGTCTTC 58.911 40.000 5.25 0.00 0.00 2.87
2659 3956 5.047802 CCAGCTGTTATTGATGTTTGGTCTT 60.048 40.000 13.81 0.00 0.00 3.01
2660 3957 4.460382 CCAGCTGTTATTGATGTTTGGTCT 59.540 41.667 13.81 0.00 0.00 3.85
2661 3958 4.380867 CCCAGCTGTTATTGATGTTTGGTC 60.381 45.833 13.81 0.00 0.00 4.02
2662 3959 3.511146 CCCAGCTGTTATTGATGTTTGGT 59.489 43.478 13.81 0.00 0.00 3.67
2663 3960 3.676873 GCCCAGCTGTTATTGATGTTTGG 60.677 47.826 13.81 2.64 0.00 3.28
2664 3961 3.056678 TGCCCAGCTGTTATTGATGTTTG 60.057 43.478 13.81 0.00 0.00 2.93
2665 3962 3.164268 TGCCCAGCTGTTATTGATGTTT 58.836 40.909 13.81 0.00 0.00 2.83
2666 3963 2.756760 CTGCCCAGCTGTTATTGATGTT 59.243 45.455 13.81 0.00 0.00 2.71
2667 3964 2.372264 CTGCCCAGCTGTTATTGATGT 58.628 47.619 13.81 0.00 0.00 3.06
2668 3965 1.679680 CCTGCCCAGCTGTTATTGATG 59.320 52.381 13.81 0.00 0.00 3.07
2669 3966 1.565759 TCCTGCCCAGCTGTTATTGAT 59.434 47.619 13.81 0.00 0.00 2.57
2670 3967 0.991146 TCCTGCCCAGCTGTTATTGA 59.009 50.000 13.81 0.55 0.00 2.57
2671 3968 1.065199 TCTCCTGCCCAGCTGTTATTG 60.065 52.381 13.81 0.00 0.00 1.90
2672 3969 1.289160 TCTCCTGCCCAGCTGTTATT 58.711 50.000 13.81 0.00 0.00 1.40
2673 3970 1.065126 GTTCTCCTGCCCAGCTGTTAT 60.065 52.381 13.81 0.00 0.00 1.89
2674 3971 0.324943 GTTCTCCTGCCCAGCTGTTA 59.675 55.000 13.81 0.00 0.00 2.41
2675 3972 1.073897 GTTCTCCTGCCCAGCTGTT 59.926 57.895 13.81 0.00 0.00 3.16
2676 3973 2.753029 GTTCTCCTGCCCAGCTGT 59.247 61.111 13.81 0.00 0.00 4.40
2677 3974 2.045536 GGTTCTCCTGCCCAGCTG 60.046 66.667 6.78 6.78 0.00 4.24
2678 3975 2.204059 AGGTTCTCCTGCCCAGCT 60.204 61.111 0.00 0.00 43.33 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.