Multiple sequence alignment - TraesCS2B01G074700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G074700 chr2B 100.000 5163 0 0 1 5163 40514197 40509035 0.000000e+00 9535.0
1 TraesCS2B01G074700 chr2B 96.656 299 9 1 3 300 549699912 549699614 3.590000e-136 496.0
2 TraesCS2B01G074700 chr2B 96.333 300 10 1 1 300 40521769 40521471 4.650000e-135 492.0
3 TraesCS2B01G074700 chr2B 85.000 60 8 1 845 903 176181107 176181166 5.580000e-05 60.2
4 TraesCS2B01G074700 chr2A 93.814 3039 107 23 1660 4674 27547001 27544020 0.000000e+00 4495.0
5 TraesCS2B01G074700 chr2A 84.062 1738 187 40 1668 3357 27551144 27552839 0.000000e+00 1592.0
6 TraesCS2B01G074700 chr2A 88.875 791 40 20 684 1429 27548137 27547350 0.000000e+00 929.0
7 TraesCS2B01G074700 chr2A 83.704 270 36 7 1353 1617 27550746 27551012 1.110000e-61 248.0
8 TraesCS2B01G074700 chr2A 89.394 198 18 3 300 497 27548328 27548134 3.990000e-61 246.0
9 TraesCS2B01G074700 chr2A 93.805 113 7 0 5051 5163 27513297 27513185 2.470000e-38 171.0
10 TraesCS2B01G074700 chr2A 92.105 114 8 1 5050 5163 27542453 27542341 5.350000e-35 159.0
11 TraesCS2B01G074700 chr2A 91.919 99 7 1 4953 5050 27543475 27543377 2.510000e-28 137.0
12 TraesCS2B01G074700 chr2D 91.223 1276 90 14 2095 3357 25046753 25045487 0.000000e+00 1716.0
13 TraesCS2B01G074700 chr2D 91.590 547 46 0 3735 4281 25044617 25044071 0.000000e+00 756.0
14 TraesCS2B01G074700 chr2D 89.903 515 43 6 300 811 25048921 25048413 0.000000e+00 654.0
15 TraesCS2B01G074700 chr2D 89.827 462 24 9 1660 2102 25047329 25046872 5.800000e-159 571.0
16 TraesCS2B01G074700 chr2D 89.977 429 19 5 1002 1415 25048117 25047698 2.740000e-147 532.0
17 TraesCS2B01G074700 chr2D 81.279 641 71 22 1668 2281 25181321 25181939 1.680000e-129 473.0
18 TraesCS2B01G074700 chr2D 81.250 640 71 23 1668 2281 25299179 25298563 6.050000e-129 472.0
19 TraesCS2B01G074700 chr2D 81.469 572 62 17 1668 2215 25285557 25285006 3.690000e-116 429.0
20 TraesCS2B01G074700 chr2D 81.469 572 62 17 1668 2215 25292292 25291741 3.690000e-116 429.0
21 TraesCS2B01G074700 chr2D 95.960 99 4 0 4953 5051 25039206 25039108 1.490000e-35 161.0
22 TraesCS2B01G074700 chr2D 89.908 109 10 1 1509 1617 25181084 25181191 6.970000e-29 139.0
23 TraesCS2B01G074700 chr4B 97.010 301 8 1 1 300 427058846 427059146 5.970000e-139 505.0
24 TraesCS2B01G074700 chr4B 96.013 301 11 1 1 300 356178604 356178904 6.010000e-134 488.0
25 TraesCS2B01G074700 chr4B 95.681 301 12 1 1 300 427052214 427052514 2.800000e-132 483.0
26 TraesCS2B01G074700 chr5B 96.700 303 8 2 1 301 635334367 635334669 2.150000e-138 503.0
27 TraesCS2B01G074700 chr5B 95.364 302 12 2 1 300 635313967 635314268 3.620000e-131 479.0
28 TraesCS2B01G074700 chr3B 96.358 302 10 1 1 301 747419402 747419101 3.590000e-136 496.0
29 TraesCS2B01G074700 chr3B 77.966 354 48 21 401 737 340782988 340783328 1.470000e-45 195.0
30 TraesCS2B01G074700 chr7B 96.013 301 11 1 1 300 695253437 695253737 6.010000e-134 488.0
31 TraesCS2B01G074700 chr7B 84.337 83 9 3 737 818 609671316 609671237 1.540000e-10 78.7
32 TraesCS2B01G074700 chr7B 84.337 83 9 3 737 818 609689502 609689423 1.540000e-10 78.7
33 TraesCS2B01G074700 chr7B 86.301 73 6 3 737 808 609662141 609662072 5.540000e-10 76.8
34 TraesCS2B01G074700 chr7B 83.133 83 10 3 737 818 609567166 609567087 7.170000e-09 73.1
35 TraesCS2B01G074700 chr7B 79.381 97 15 5 712 808 609558981 609558890 4.320000e-06 63.9
36 TraesCS2B01G074700 chr7B 79.381 97 15 5 712 808 609568236 609568145 4.320000e-06 63.9
37 TraesCS2B01G074700 chrUn 81.435 641 69 23 1668 2281 24854015 24853398 3.620000e-131 479.0
38 TraesCS2B01G074700 chrUn 81.675 573 61 18 1668 2215 24847085 24846532 2.210000e-118 436.0
39 TraesCS2B01G074700 chr4D 80.451 266 41 8 452 715 375441390 375441646 5.280000e-45 193.0
40 TraesCS2B01G074700 chr1D 79.899 199 33 6 380 574 434363649 434363454 6.970000e-29 139.0
41 TraesCS2B01G074700 chr7D 81.915 94 15 2 427 519 614186053 614185961 1.540000e-10 78.7
42 TraesCS2B01G074700 chr7D 84.722 72 7 3 748 818 561259817 561259749 9.280000e-08 69.4
43 TraesCS2B01G074700 chr1B 84.416 77 10 2 874 949 444177888 444177963 1.990000e-09 75.0
44 TraesCS2B01G074700 chr3D 77.966 118 23 2 458 573 56286158 56286042 2.580000e-08 71.3
45 TraesCS2B01G074700 chr3D 77.966 118 23 2 458 573 56300004 56299888 2.580000e-08 71.3
46 TraesCS2B01G074700 chr3D 78.151 119 21 4 458 573 56300795 56300679 2.580000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G074700 chr2B 40509035 40514197 5162 True 9535.0 9535 100.0000 1 5163 1 chr2B.!!$R1 5162
1 TraesCS2B01G074700 chr2A 27542341 27548328 5987 True 1193.2 4495 91.2214 300 5163 5 chr2A.!!$R2 4863
2 TraesCS2B01G074700 chr2A 27550746 27552839 2093 False 920.0 1592 83.8830 1353 3357 2 chr2A.!!$F1 2004
3 TraesCS2B01G074700 chr2D 25044071 25048921 4850 True 845.8 1716 90.5040 300 4281 5 chr2D.!!$R5 3981
4 TraesCS2B01G074700 chr2D 25298563 25299179 616 True 472.0 472 81.2500 1668 2281 1 chr2D.!!$R4 613
5 TraesCS2B01G074700 chr2D 25285006 25285557 551 True 429.0 429 81.4690 1668 2215 1 chr2D.!!$R2 547
6 TraesCS2B01G074700 chr2D 25291741 25292292 551 True 429.0 429 81.4690 1668 2215 1 chr2D.!!$R3 547
7 TraesCS2B01G074700 chr2D 25181084 25181939 855 False 306.0 473 85.5935 1509 2281 2 chr2D.!!$F1 772
8 TraesCS2B01G074700 chrUn 24853398 24854015 617 True 479.0 479 81.4350 1668 2281 1 chrUn.!!$R2 613
9 TraesCS2B01G074700 chrUn 24846532 24847085 553 True 436.0 436 81.6750 1668 2215 1 chrUn.!!$R1 547

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
44 45 0.038709 GATAGCAGGCTCGCGAAGAT 60.039 55.0 11.33 1.63 36.85 2.40 F
49 50 0.039617 CAGGCTCGCGAAGATAGGAG 60.040 60.0 11.33 0.00 0.00 3.69 F
263 264 0.040058 TGATGAGCACAAGGGCCATT 59.960 50.0 6.18 0.00 0.00 3.16 F
958 970 0.109132 CAAAAATGGTCGCTGGGAGC 60.109 55.0 15.91 15.91 43.52 4.70 F
959 971 0.251341 AAAAATGGTCGCTGGGAGCT 60.251 50.0 21.81 7.54 43.60 4.09 F
1394 1521 0.395311 TCCTGGTCGCGGTTAGATCT 60.395 55.0 6.13 0.00 0.00 2.75 F
2910 3329 0.741221 GCACCATCCTCGACCTTGAC 60.741 60.0 0.00 0.00 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1134 1258 1.004361 GGGAGGAGGTGGTGGGTAT 59.996 63.158 0.00 0.0 0.00 2.73 R
1625 1802 2.335316 ACGTACAAAACAGGGCTTCA 57.665 45.000 0.00 0.0 0.00 3.02 R
1677 1931 3.539604 AGAGCATATGAGCAAGGAACAC 58.460 45.455 6.97 0.0 36.85 3.32 R
2910 3329 1.093159 GCTTCCCATCAGCACTGAAG 58.907 55.000 4.14 0.0 43.58 3.02 R
3207 3640 2.913777 GTGAAAATACCTTCACGGGC 57.086 50.000 1.08 0.0 44.13 6.13 R
3538 4513 0.457851 CTGCTGGAGAGTCGTAAGGG 59.542 60.000 0.00 0.0 38.47 3.95 R
5070 7300 0.032130 AAGACGCTCGAGTTGCTGAA 59.968 50.000 15.13 0.0 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.387947 ACAGCCCCGGAACCTACG 61.388 66.667 0.73 0.00 0.00 3.51
25 26 3.059603 CGGAACCTACGGAATGGTG 57.940 57.895 0.00 0.00 36.57 4.17
26 27 0.533491 CGGAACCTACGGAATGGTGA 59.467 55.000 0.00 0.00 36.57 4.02
27 28 1.138266 CGGAACCTACGGAATGGTGAT 59.862 52.381 0.00 0.00 36.57 3.06
28 29 2.363038 CGGAACCTACGGAATGGTGATA 59.637 50.000 0.00 0.00 36.57 2.15
29 30 3.552273 CGGAACCTACGGAATGGTGATAG 60.552 52.174 0.00 0.00 36.57 2.08
30 31 3.391049 GAACCTACGGAATGGTGATAGC 58.609 50.000 0.00 0.00 36.57 2.97
31 32 2.394632 ACCTACGGAATGGTGATAGCA 58.605 47.619 0.00 0.00 34.90 3.49
32 33 2.365617 ACCTACGGAATGGTGATAGCAG 59.634 50.000 0.00 0.00 34.90 4.24
33 34 2.289072 CCTACGGAATGGTGATAGCAGG 60.289 54.545 0.00 0.00 0.00 4.85
34 35 0.179045 ACGGAATGGTGATAGCAGGC 60.179 55.000 0.00 0.00 0.00 4.85
35 36 0.107456 CGGAATGGTGATAGCAGGCT 59.893 55.000 0.00 0.00 0.00 4.58
36 37 1.875576 CGGAATGGTGATAGCAGGCTC 60.876 57.143 0.00 0.00 0.00 4.70
37 38 1.506493 GAATGGTGATAGCAGGCTCG 58.494 55.000 0.00 0.00 0.00 5.03
38 39 0.533755 AATGGTGATAGCAGGCTCGC 60.534 55.000 0.00 1.36 0.00 5.03
39 40 2.659897 GGTGATAGCAGGCTCGCG 60.660 66.667 0.00 0.00 36.85 5.87
40 41 2.413351 GTGATAGCAGGCTCGCGA 59.587 61.111 9.26 9.26 36.85 5.87
41 42 1.226974 GTGATAGCAGGCTCGCGAA 60.227 57.895 11.33 0.00 36.85 4.70
42 43 1.066422 TGATAGCAGGCTCGCGAAG 59.934 57.895 11.33 5.69 36.85 3.79
43 44 1.360551 GATAGCAGGCTCGCGAAGA 59.639 57.895 11.33 0.00 36.85 2.87
44 45 0.038709 GATAGCAGGCTCGCGAAGAT 60.039 55.000 11.33 1.63 36.85 2.40
45 46 1.200252 GATAGCAGGCTCGCGAAGATA 59.800 52.381 11.33 4.08 36.85 1.98
46 47 0.593618 TAGCAGGCTCGCGAAGATAG 59.406 55.000 11.33 0.00 36.85 2.08
47 48 1.663074 GCAGGCTCGCGAAGATAGG 60.663 63.158 11.33 0.00 0.00 2.57
48 49 2.033793 CAGGCTCGCGAAGATAGGA 58.966 57.895 11.33 0.00 0.00 2.94
49 50 0.039617 CAGGCTCGCGAAGATAGGAG 60.040 60.000 11.33 0.00 0.00 3.69
50 51 0.466555 AGGCTCGCGAAGATAGGAGT 60.467 55.000 11.33 0.00 0.00 3.85
51 52 0.386113 GGCTCGCGAAGATAGGAGTT 59.614 55.000 11.33 0.00 0.00 3.01
52 53 1.607628 GGCTCGCGAAGATAGGAGTTA 59.392 52.381 11.33 0.00 0.00 2.24
53 54 2.034305 GGCTCGCGAAGATAGGAGTTAA 59.966 50.000 11.33 0.00 0.00 2.01
54 55 3.044286 GCTCGCGAAGATAGGAGTTAAC 58.956 50.000 11.33 0.00 0.00 2.01
55 56 3.630101 CTCGCGAAGATAGGAGTTAACC 58.370 50.000 11.33 0.00 0.00 2.85
56 57 3.285484 TCGCGAAGATAGGAGTTAACCT 58.715 45.455 6.20 0.00 43.32 3.50
57 58 3.066342 TCGCGAAGATAGGAGTTAACCTG 59.934 47.826 6.20 0.00 40.81 4.00
58 59 3.718815 GCGAAGATAGGAGTTAACCTGG 58.281 50.000 0.88 0.00 40.81 4.45
59 60 3.132467 GCGAAGATAGGAGTTAACCTGGT 59.868 47.826 0.88 0.00 40.81 4.00
60 61 4.737055 GCGAAGATAGGAGTTAACCTGGTC 60.737 50.000 0.00 0.00 40.81 4.02
61 62 4.401519 CGAAGATAGGAGTTAACCTGGTCA 59.598 45.833 0.00 0.00 40.81 4.02
62 63 5.450688 CGAAGATAGGAGTTAACCTGGTCAG 60.451 48.000 0.00 0.00 40.81 3.51
63 64 3.707102 AGATAGGAGTTAACCTGGTCAGC 59.293 47.826 0.00 0.00 40.81 4.26
64 65 2.031495 AGGAGTTAACCTGGTCAGCT 57.969 50.000 0.00 0.00 39.01 4.24
65 66 1.625818 AGGAGTTAACCTGGTCAGCTG 59.374 52.381 7.63 7.63 39.01 4.24
66 67 1.348036 GGAGTTAACCTGGTCAGCTGT 59.652 52.381 14.67 0.00 0.00 4.40
67 68 2.224548 GGAGTTAACCTGGTCAGCTGTT 60.225 50.000 14.67 1.62 0.00 3.16
68 69 3.067833 GAGTTAACCTGGTCAGCTGTTC 58.932 50.000 14.67 8.29 0.00 3.18
69 70 2.152016 GTTAACCTGGTCAGCTGTTCC 58.848 52.381 14.67 17.17 0.00 3.62
70 71 1.729586 TAACCTGGTCAGCTGTTCCT 58.270 50.000 23.22 11.44 0.00 3.36
71 72 0.109342 AACCTGGTCAGCTGTTCCTG 59.891 55.000 23.22 22.01 0.00 3.86
72 73 1.056700 ACCTGGTCAGCTGTTCCTGT 61.057 55.000 23.22 18.65 34.47 4.00
73 74 0.604780 CCTGGTCAGCTGTTCCTGTG 60.605 60.000 23.22 15.64 34.47 3.66
74 75 0.604780 CTGGTCAGCTGTTCCTGTGG 60.605 60.000 23.22 12.15 34.47 4.17
75 76 1.302832 GGTCAGCTGTTCCTGTGGG 60.303 63.158 14.67 0.00 34.47 4.61
76 77 1.754745 GTCAGCTGTTCCTGTGGGA 59.245 57.895 14.67 0.00 40.36 4.37
86 87 0.991920 TCCTGTGGGAAATGGAGTCC 59.008 55.000 0.73 0.73 38.93 3.85
104 105 3.654414 GTCCCATAGACGTTGATGATCC 58.346 50.000 11.14 0.00 35.30 3.36
105 106 3.069586 GTCCCATAGACGTTGATGATCCA 59.930 47.826 11.14 0.00 35.30 3.41
106 107 3.069586 TCCCATAGACGTTGATGATCCAC 59.930 47.826 11.14 0.00 0.00 4.02
107 108 3.181466 CCCATAGACGTTGATGATCCACA 60.181 47.826 11.14 0.00 0.00 4.17
108 109 4.441792 CCATAGACGTTGATGATCCACAA 58.558 43.478 11.14 0.00 0.00 3.33
109 110 4.875536 CCATAGACGTTGATGATCCACAAA 59.124 41.667 11.14 0.00 0.00 2.83
110 111 5.220662 CCATAGACGTTGATGATCCACAAAC 60.221 44.000 11.14 0.00 0.00 2.93
111 112 4.008074 AGACGTTGATGATCCACAAACT 57.992 40.909 0.00 2.72 0.00 2.66
112 113 3.748048 AGACGTTGATGATCCACAAACTG 59.252 43.478 0.00 1.44 0.00 3.16
113 114 2.226437 ACGTTGATGATCCACAAACTGC 59.774 45.455 0.00 0.00 0.00 4.40
114 115 2.485426 CGTTGATGATCCACAAACTGCT 59.515 45.455 0.00 0.00 0.00 4.24
115 116 3.058016 CGTTGATGATCCACAAACTGCTT 60.058 43.478 0.00 0.00 0.00 3.91
116 117 4.479619 GTTGATGATCCACAAACTGCTTC 58.520 43.478 3.79 0.00 0.00 3.86
117 118 3.084039 TGATGATCCACAAACTGCTTCC 58.916 45.455 0.00 0.00 0.00 3.46
118 119 1.522668 TGATCCACAAACTGCTTCCG 58.477 50.000 0.00 0.00 0.00 4.30
119 120 0.169009 GATCCACAAACTGCTTCCGC 59.831 55.000 0.00 0.00 0.00 5.54
120 121 1.244019 ATCCACAAACTGCTTCCGCC 61.244 55.000 0.00 0.00 34.43 6.13
121 122 1.898574 CCACAAACTGCTTCCGCCT 60.899 57.895 0.00 0.00 34.43 5.52
122 123 1.455383 CCACAAACTGCTTCCGCCTT 61.455 55.000 0.00 0.00 34.43 4.35
123 124 0.040067 CACAAACTGCTTCCGCCTTC 60.040 55.000 0.00 0.00 34.43 3.46
124 125 0.465460 ACAAACTGCTTCCGCCTTCA 60.465 50.000 0.00 0.00 34.43 3.02
125 126 0.667993 CAAACTGCTTCCGCCTTCAA 59.332 50.000 0.00 0.00 34.43 2.69
126 127 0.668535 AAACTGCTTCCGCCTTCAAC 59.331 50.000 0.00 0.00 34.43 3.18
127 128 1.172812 AACTGCTTCCGCCTTCAACC 61.173 55.000 0.00 0.00 34.43 3.77
128 129 1.600636 CTGCTTCCGCCTTCAACCA 60.601 57.895 0.00 0.00 34.43 3.67
129 130 1.856265 CTGCTTCCGCCTTCAACCAC 61.856 60.000 0.00 0.00 34.43 4.16
130 131 1.600916 GCTTCCGCCTTCAACCACT 60.601 57.895 0.00 0.00 0.00 4.00
131 132 0.321298 GCTTCCGCCTTCAACCACTA 60.321 55.000 0.00 0.00 0.00 2.74
132 133 1.726853 CTTCCGCCTTCAACCACTAG 58.273 55.000 0.00 0.00 0.00 2.57
133 134 1.275291 CTTCCGCCTTCAACCACTAGA 59.725 52.381 0.00 0.00 0.00 2.43
134 135 1.344065 TCCGCCTTCAACCACTAGAA 58.656 50.000 0.00 0.00 0.00 2.10
135 136 1.695242 TCCGCCTTCAACCACTAGAAA 59.305 47.619 0.00 0.00 0.00 2.52
136 137 2.105134 TCCGCCTTCAACCACTAGAAAA 59.895 45.455 0.00 0.00 0.00 2.29
137 138 2.225727 CCGCCTTCAACCACTAGAAAAC 59.774 50.000 0.00 0.00 0.00 2.43
138 139 2.875933 CGCCTTCAACCACTAGAAAACA 59.124 45.455 0.00 0.00 0.00 2.83
139 140 3.502211 CGCCTTCAACCACTAGAAAACAT 59.498 43.478 0.00 0.00 0.00 2.71
140 141 4.023193 CGCCTTCAACCACTAGAAAACATT 60.023 41.667 0.00 0.00 0.00 2.71
141 142 5.507315 CGCCTTCAACCACTAGAAAACATTT 60.507 40.000 0.00 0.00 0.00 2.32
142 143 5.691754 GCCTTCAACCACTAGAAAACATTTG 59.308 40.000 0.00 0.00 0.00 2.32
143 144 6.682861 GCCTTCAACCACTAGAAAACATTTGT 60.683 38.462 0.00 0.00 0.00 2.83
144 145 7.264947 CCTTCAACCACTAGAAAACATTTGTT 58.735 34.615 0.00 0.00 40.50 2.83
145 146 7.222611 CCTTCAACCACTAGAAAACATTTGTTG 59.777 37.037 0.00 0.00 38.44 3.33
146 147 7.164230 TCAACCACTAGAAAACATTTGTTGT 57.836 32.000 0.00 0.00 41.53 3.32
147 148 8.282455 TCAACCACTAGAAAACATTTGTTGTA 57.718 30.769 0.00 0.00 37.68 2.41
148 149 8.185505 TCAACCACTAGAAAACATTTGTTGTAC 58.814 33.333 0.00 0.00 37.68 2.90
149 150 7.875327 ACCACTAGAAAACATTTGTTGTACT 57.125 32.000 0.00 0.76 37.68 2.73
150 151 7.927048 ACCACTAGAAAACATTTGTTGTACTC 58.073 34.615 0.00 0.00 37.68 2.59
151 152 7.554835 ACCACTAGAAAACATTTGTTGTACTCA 59.445 33.333 0.00 0.00 37.68 3.41
152 153 7.855904 CCACTAGAAAACATTTGTTGTACTCAC 59.144 37.037 0.00 0.00 37.68 3.51
153 154 8.394877 CACTAGAAAACATTTGTTGTACTCACA 58.605 33.333 0.00 0.00 37.68 3.58
154 155 8.612619 ACTAGAAAACATTTGTTGTACTCACAG 58.387 33.333 0.00 0.00 37.68 3.66
155 156 7.624360 AGAAAACATTTGTTGTACTCACAGA 57.376 32.000 0.00 0.00 37.68 3.41
156 157 7.472543 AGAAAACATTTGTTGTACTCACAGAC 58.527 34.615 0.00 0.00 37.68 3.51
157 158 5.751243 AACATTTGTTGTACTCACAGACC 57.249 39.130 0.00 0.00 37.68 3.85
158 159 4.776349 ACATTTGTTGTACTCACAGACCA 58.224 39.130 0.00 0.00 36.57 4.02
159 160 4.816385 ACATTTGTTGTACTCACAGACCAG 59.184 41.667 0.00 0.00 36.57 4.00
160 161 4.746535 TTTGTTGTACTCACAGACCAGA 57.253 40.909 0.00 0.00 35.67 3.86
161 162 4.746535 TTGTTGTACTCACAGACCAGAA 57.253 40.909 0.00 0.00 35.67 3.02
162 163 4.955811 TGTTGTACTCACAGACCAGAAT 57.044 40.909 0.00 0.00 35.67 2.40
163 164 4.631131 TGTTGTACTCACAGACCAGAATG 58.369 43.478 0.00 0.00 35.67 2.67
180 181 6.932356 CAGAATGGTCTTGTACTGCATATT 57.068 37.500 0.00 0.00 28.78 1.28
181 182 7.325660 CAGAATGGTCTTGTACTGCATATTT 57.674 36.000 0.00 0.00 28.78 1.40
182 183 7.765307 CAGAATGGTCTTGTACTGCATATTTT 58.235 34.615 0.00 0.00 28.78 1.82
183 184 8.246180 CAGAATGGTCTTGTACTGCATATTTTT 58.754 33.333 0.00 0.00 28.78 1.94
184 185 9.461312 AGAATGGTCTTGTACTGCATATTTTTA 57.539 29.630 0.00 0.00 0.00 1.52
194 195 9.149225 TGTACTGCATATTTTTATTTTGCTTGG 57.851 29.630 0.00 0.00 34.47 3.61
195 196 9.364989 GTACTGCATATTTTTATTTTGCTTGGA 57.635 29.630 0.00 0.00 34.47 3.53
196 197 8.845413 ACTGCATATTTTTATTTTGCTTGGAA 57.155 26.923 0.00 0.00 34.47 3.53
197 198 9.452287 ACTGCATATTTTTATTTTGCTTGGAAT 57.548 25.926 0.00 0.00 34.47 3.01
209 210 8.767478 ATTTTGCTTGGAATTTCTGTATCAAG 57.233 30.769 7.56 7.56 35.90 3.02
210 211 6.899393 TTGCTTGGAATTTCTGTATCAAGT 57.101 33.333 11.48 0.00 35.43 3.16
211 212 6.899393 TGCTTGGAATTTCTGTATCAAGTT 57.101 33.333 11.48 0.00 35.43 2.66
212 213 6.680810 TGCTTGGAATTTCTGTATCAAGTTG 58.319 36.000 0.00 0.00 35.43 3.16
213 214 6.095377 GCTTGGAATTTCTGTATCAAGTTGG 58.905 40.000 2.34 0.00 35.43 3.77
214 215 6.294731 GCTTGGAATTTCTGTATCAAGTTGGT 60.295 38.462 2.34 0.00 35.43 3.67
215 216 6.573664 TGGAATTTCTGTATCAAGTTGGTG 57.426 37.500 2.34 0.00 0.00 4.17
216 217 5.048083 TGGAATTTCTGTATCAAGTTGGTGC 60.048 40.000 2.34 0.00 0.00 5.01
217 218 5.391312 AATTTCTGTATCAAGTTGGTGCC 57.609 39.130 2.34 0.00 0.00 5.01
218 219 3.788227 TTCTGTATCAAGTTGGTGCCT 57.212 42.857 2.34 0.00 0.00 4.75
219 220 3.334583 TCTGTATCAAGTTGGTGCCTC 57.665 47.619 2.34 0.00 0.00 4.70
220 221 2.637382 TCTGTATCAAGTTGGTGCCTCA 59.363 45.455 2.34 0.00 0.00 3.86
221 222 3.264193 TCTGTATCAAGTTGGTGCCTCAT 59.736 43.478 2.34 0.00 0.00 2.90
222 223 3.609853 TGTATCAAGTTGGTGCCTCATC 58.390 45.455 2.34 0.00 0.00 2.92
223 224 2.885135 ATCAAGTTGGTGCCTCATCA 57.115 45.000 2.34 0.00 0.00 3.07
224 225 2.189594 TCAAGTTGGTGCCTCATCAG 57.810 50.000 2.34 0.00 0.00 2.90
225 226 0.524862 CAAGTTGGTGCCTCATCAGC 59.475 55.000 0.00 0.00 35.22 4.26
226 227 0.403271 AAGTTGGTGCCTCATCAGCT 59.597 50.000 0.00 0.00 37.63 4.24
227 228 1.279496 AGTTGGTGCCTCATCAGCTA 58.721 50.000 0.00 0.00 34.42 3.32
228 229 1.630369 AGTTGGTGCCTCATCAGCTAA 59.370 47.619 0.00 0.00 34.42 3.09
229 230 1.740025 GTTGGTGCCTCATCAGCTAAC 59.260 52.381 0.00 0.00 35.63 2.34
230 231 0.983467 TGGTGCCTCATCAGCTAACA 59.017 50.000 0.00 0.00 35.63 2.41
231 232 1.065926 TGGTGCCTCATCAGCTAACAG 60.066 52.381 0.00 0.00 35.63 3.16
232 233 1.065854 GGTGCCTCATCAGCTAACAGT 60.066 52.381 0.00 0.00 0.00 3.55
233 234 2.168521 GGTGCCTCATCAGCTAACAGTA 59.831 50.000 0.00 0.00 0.00 2.74
234 235 3.369471 GGTGCCTCATCAGCTAACAGTAA 60.369 47.826 0.00 0.00 0.00 2.24
235 236 4.446371 GTGCCTCATCAGCTAACAGTAAT 58.554 43.478 0.00 0.00 0.00 1.89
236 237 4.509600 GTGCCTCATCAGCTAACAGTAATC 59.490 45.833 0.00 0.00 0.00 1.75
237 238 4.061596 GCCTCATCAGCTAACAGTAATCC 58.938 47.826 0.00 0.00 0.00 3.01
238 239 4.202305 GCCTCATCAGCTAACAGTAATCCT 60.202 45.833 0.00 0.00 0.00 3.24
240 241 5.282055 TCATCAGCTAACAGTAATCCTGG 57.718 43.478 0.00 0.00 46.06 4.45
241 242 4.101585 TCATCAGCTAACAGTAATCCTGGG 59.898 45.833 0.00 0.00 46.06 4.45
242 243 2.771943 TCAGCTAACAGTAATCCTGGGG 59.228 50.000 0.00 0.00 46.06 4.96
243 244 1.490910 AGCTAACAGTAATCCTGGGGC 59.509 52.381 0.00 0.00 46.06 5.80
244 245 1.490910 GCTAACAGTAATCCTGGGGCT 59.509 52.381 0.00 0.00 46.06 5.19
245 246 2.746472 GCTAACAGTAATCCTGGGGCTG 60.746 54.545 0.00 0.34 46.06 4.85
246 247 1.668826 AACAGTAATCCTGGGGCTGA 58.331 50.000 12.16 0.00 46.06 4.26
247 248 1.898863 ACAGTAATCCTGGGGCTGAT 58.101 50.000 12.16 0.00 46.06 2.90
248 249 1.492176 ACAGTAATCCTGGGGCTGATG 59.508 52.381 12.16 1.16 46.06 3.07
249 250 1.770658 CAGTAATCCTGGGGCTGATGA 59.229 52.381 0.00 0.00 37.54 2.92
250 251 2.053244 AGTAATCCTGGGGCTGATGAG 58.947 52.381 0.00 0.00 0.00 2.90
251 252 0.767375 TAATCCTGGGGCTGATGAGC 59.233 55.000 0.00 0.00 45.40 4.26
259 260 3.194719 GCTGATGAGCACAAGGGC 58.805 61.111 0.00 0.00 45.46 5.19
260 261 2.413142 GCTGATGAGCACAAGGGCC 61.413 63.158 0.00 0.00 45.46 5.80
261 262 1.001764 CTGATGAGCACAAGGGCCA 60.002 57.895 6.18 0.00 0.00 5.36
262 263 0.395311 CTGATGAGCACAAGGGCCAT 60.395 55.000 6.18 0.00 0.00 4.40
263 264 0.040058 TGATGAGCACAAGGGCCATT 59.960 50.000 6.18 0.00 0.00 3.16
264 265 1.188863 GATGAGCACAAGGGCCATTT 58.811 50.000 6.18 0.00 0.00 2.32
265 266 1.551883 GATGAGCACAAGGGCCATTTT 59.448 47.619 6.18 0.00 0.00 1.82
266 267 0.968405 TGAGCACAAGGGCCATTTTC 59.032 50.000 6.18 0.00 0.00 2.29
267 268 1.260544 GAGCACAAGGGCCATTTTCT 58.739 50.000 6.18 0.00 0.00 2.52
268 269 0.971386 AGCACAAGGGCCATTTTCTG 59.029 50.000 6.18 0.00 0.00 3.02
284 285 7.341445 CATTTTCTGGAAATTAATACCCGGA 57.659 36.000 0.73 11.51 35.79 5.14
285 286 7.777095 CATTTTCTGGAAATTAATACCCGGAA 58.223 34.615 18.91 18.91 41.00 4.30
286 287 7.778185 TTTTCTGGAAATTAATACCCGGAAA 57.222 32.000 24.71 24.71 46.47 3.13
287 288 7.778185 TTTCTGGAAATTAATACCCGGAAAA 57.222 32.000 25.52 16.29 45.68 2.29
288 289 6.762702 TCTGGAAATTAATACCCGGAAAAC 57.237 37.500 0.73 0.00 31.60 2.43
289 290 5.653330 TCTGGAAATTAATACCCGGAAAACC 59.347 40.000 0.73 0.00 31.60 3.27
290 291 4.398673 TGGAAATTAATACCCGGAAAACCG 59.601 41.667 0.73 0.00 0.00 4.44
297 298 2.973600 CCGGAAAACCGGTTGCGA 60.974 61.111 23.08 0.00 44.12 5.10
298 299 2.250190 CGGAAAACCGGTTGCGAC 59.750 61.111 23.08 12.17 44.12 5.19
303 304 1.532007 GAAAACCGGTTGCGACACATA 59.468 47.619 23.08 0.00 0.00 2.29
410 411 7.115378 GTGAAAAGAATGGCACTTTTATGACTG 59.885 37.037 13.77 0.00 44.20 3.51
413 416 5.809001 AGAATGGCACTTTTATGACTGAGA 58.191 37.500 0.00 0.00 0.00 3.27
414 417 5.879223 AGAATGGCACTTTTATGACTGAGAG 59.121 40.000 0.00 0.00 0.00 3.20
415 418 4.890158 TGGCACTTTTATGACTGAGAGA 57.110 40.909 0.00 0.00 0.00 3.10
416 419 5.227569 TGGCACTTTTATGACTGAGAGAA 57.772 39.130 0.00 0.00 0.00 2.87
417 420 4.997395 TGGCACTTTTATGACTGAGAGAAC 59.003 41.667 0.00 0.00 0.00 3.01
418 421 4.092091 GGCACTTTTATGACTGAGAGAACG 59.908 45.833 0.00 0.00 0.00 3.95
419 422 4.092091 GCACTTTTATGACTGAGAGAACGG 59.908 45.833 0.00 0.00 0.00 4.44
420 423 4.092091 CACTTTTATGACTGAGAGAACGGC 59.908 45.833 0.00 0.00 0.00 5.68
434 437 8.909708 TGAGAGAACGGCATTTTTAATTATTG 57.090 30.769 0.00 0.00 0.00 1.90
505 508 7.244166 TGACATGGCATTTTTGTTTGTAAAG 57.756 32.000 0.00 0.00 0.00 1.85
512 515 6.147656 GGCATTTTTGTTTGTAAAGAGGATGG 59.852 38.462 0.00 0.00 0.00 3.51
521 524 8.424918 TGTTTGTAAAGAGGATGGCATTTTTAA 58.575 29.630 0.00 0.00 0.00 1.52
591 594 7.748691 ATGTTTAATTGCATGGAAGCTTTTT 57.251 28.000 5.69 0.00 34.99 1.94
633 636 7.992754 AATATTTTATCAGAGGATGGCAGTC 57.007 36.000 0.00 0.00 34.89 3.51
635 638 4.679373 TTTATCAGAGGATGGCAGTCTC 57.321 45.455 10.69 10.69 34.89 3.36
647 650 5.163713 GGATGGCAGTCTCATAAAGTTTCAC 60.164 44.000 0.00 0.00 0.00 3.18
648 651 3.745975 TGGCAGTCTCATAAAGTTTCACG 59.254 43.478 0.00 0.00 0.00 4.35
649 652 3.746492 GGCAGTCTCATAAAGTTTCACGT 59.254 43.478 0.00 0.00 0.00 4.49
651 654 4.447724 GCAGTCTCATAAAGTTTCACGTCA 59.552 41.667 0.00 0.00 0.00 4.35
697 700 9.818796 ATTTCAATAAAATTTGCGCGTATTTTT 57.181 22.222 26.65 20.57 33.69 1.94
726 729 8.899427 TTCATGGCATTTTTGTTTATCAAAGA 57.101 26.923 0.00 0.00 45.14 2.52
727 730 9.504708 TTCATGGCATTTTTGTTTATCAAAGAT 57.495 25.926 0.00 0.00 45.14 2.40
769 773 5.182380 CGGAGGATGGCAGTTTTTAAGTTTA 59.818 40.000 0.00 0.00 0.00 2.01
833 840 9.862371 TGTTGTTTTAAAGCTGTATTTTTCTGA 57.138 25.926 3.62 0.00 0.00 3.27
837 844 7.833285 TTTAAAGCTGTATTTTTCTGAGGGT 57.167 32.000 0.00 0.00 0.00 4.34
838 845 7.833285 TTAAAGCTGTATTTTTCTGAGGGTT 57.167 32.000 0.00 0.00 0.00 4.11
839 846 6.731292 AAAGCTGTATTTTTCTGAGGGTTT 57.269 33.333 0.00 0.00 0.00 3.27
840 847 6.731292 AAGCTGTATTTTTCTGAGGGTTTT 57.269 33.333 0.00 0.00 0.00 2.43
945 957 1.340889 TGCTGGCGAAAGAGCAAAAAT 59.659 42.857 0.00 0.00 42.22 1.82
958 970 0.109132 CAAAAATGGTCGCTGGGAGC 60.109 55.000 15.91 15.91 43.52 4.70
959 971 0.251341 AAAAATGGTCGCTGGGAGCT 60.251 50.000 21.81 7.54 43.60 4.09
960 972 0.678048 AAAATGGTCGCTGGGAGCTC 60.678 55.000 21.81 4.71 43.60 4.09
961 973 2.543067 AAATGGTCGCTGGGAGCTCC 62.543 60.000 25.59 25.59 43.60 4.70
962 974 3.991924 ATGGTCGCTGGGAGCTCCT 62.992 63.158 31.36 6.10 43.60 3.69
1134 1258 1.893588 AATCTCCCCCGTACCCTGGA 61.894 60.000 0.00 0.00 0.00 3.86
1159 1283 4.024984 CACCTCCTCCCCTCCCCA 62.025 72.222 0.00 0.00 0.00 4.96
1342 1469 0.771127 CCTTGACCCCCTTCTGACAA 59.229 55.000 0.00 0.00 0.00 3.18
1393 1520 0.458669 TTCCTGGTCGCGGTTAGATC 59.541 55.000 6.13 0.00 0.00 2.75
1394 1521 0.395311 TCCTGGTCGCGGTTAGATCT 60.395 55.000 6.13 0.00 0.00 2.75
1409 1543 6.183360 CGGTTAGATCTGCAAAATTGATGTCT 60.183 38.462 5.18 0.00 0.00 3.41
1421 1555 8.273557 GCAAAATTGATGTCTGAATATGCATTC 58.726 33.333 3.54 0.00 40.92 2.67
1424 1558 7.818997 ATTGATGTCTGAATATGCATTCTGT 57.181 32.000 3.54 0.00 41.09 3.41
1429 1563 5.945191 TGTCTGAATATGCATTCTGTCCAAA 59.055 36.000 3.54 0.00 41.09 3.28
1432 1592 6.604396 TCTGAATATGCATTCTGTCCAAATGT 59.396 34.615 3.54 0.00 41.09 2.71
1434 1594 7.613585 TGAATATGCATTCTGTCCAAATGTTT 58.386 30.769 3.54 0.00 41.09 2.83
1443 1603 6.861065 TCTGTCCAAATGTTTAAGTGAGAC 57.139 37.500 0.00 0.00 0.00 3.36
1446 1606 5.465390 TGTCCAAATGTTTAAGTGAGACTCG 59.535 40.000 0.00 0.00 0.00 4.18
1450 1610 6.355638 CAAATGTTTAAGTGAGACTCGTGTC 58.644 40.000 9.57 9.57 43.22 3.67
1451 1611 4.642445 TGTTTAAGTGAGACTCGTGTCA 57.358 40.909 18.92 0.00 45.20 3.58
1452 1612 5.196341 TGTTTAAGTGAGACTCGTGTCAT 57.804 39.130 18.92 5.05 45.20 3.06
1453 1613 5.220381 TGTTTAAGTGAGACTCGTGTCATC 58.780 41.667 18.92 13.22 45.20 2.92
1455 1615 6.206048 TGTTTAAGTGAGACTCGTGTCATCTA 59.794 38.462 18.92 0.56 45.20 1.98
1457 1617 4.891627 AGTGAGACTCGTGTCATCTATG 57.108 45.455 18.92 0.00 45.20 2.23
1467 1630 9.171701 GACTCGTGTCATCTATGTAAGATAAAC 57.828 37.037 12.54 0.00 43.42 2.01
1561 1728 7.241376 CGGTAATGGTTGAACTTGAAACTATC 58.759 38.462 0.00 0.00 28.53 2.08
1567 1734 5.412904 GGTTGAACTTGAAACTATCTGAGGG 59.587 44.000 0.00 0.00 0.00 4.30
1582 1749 5.359194 TCTGAGGGATTGTGGAGAATTAC 57.641 43.478 0.00 0.00 0.00 1.89
1641 1818 6.478512 AGAAAATTGAAGCCCTGTTTTGTA 57.521 33.333 0.00 0.00 0.00 2.41
1643 1820 3.915437 ATTGAAGCCCTGTTTTGTACG 57.085 42.857 0.00 0.00 0.00 3.67
1646 1823 3.806380 TGAAGCCCTGTTTTGTACGTTA 58.194 40.909 0.00 0.00 0.00 3.18
1648 1825 4.822896 TGAAGCCCTGTTTTGTACGTTATT 59.177 37.500 0.00 0.00 0.00 1.40
1677 1931 8.776376 ATATTTGGCTTCTTAAACACCATTTG 57.224 30.769 0.00 0.00 0.00 2.32
1692 1946 4.218200 CACCATTTGTGTTCCTTGCTCATA 59.782 41.667 0.00 0.00 40.26 2.15
1868 2122 2.551887 TCAATTGTGTGGATTGGTCACG 59.448 45.455 5.13 0.00 37.91 4.35
1885 2139 3.630769 GTCACGGAGTCATGGTATGTAGA 59.369 47.826 0.00 0.00 41.61 2.59
1955 2232 7.106239 CACTTAGAAATGATGAGGTGTAAGGT 58.894 38.462 0.00 0.00 0.00 3.50
1969 2246 5.187967 AGGTGTAAGGTGTTCTCTAGGATTG 59.812 44.000 0.00 0.00 0.00 2.67
1970 2247 4.870991 GTGTAAGGTGTTCTCTAGGATTGC 59.129 45.833 0.00 0.00 0.00 3.56
1971 2248 4.530553 TGTAAGGTGTTCTCTAGGATTGCA 59.469 41.667 0.00 0.00 0.00 4.08
1980 2257 6.127563 TGTTCTCTAGGATTGCACGTTACATA 60.128 38.462 0.00 0.00 0.00 2.29
2024 2302 6.355747 TCTTGCCTTTTGGTTTTTGATTCAT 58.644 32.000 0.00 0.00 42.99 2.57
2026 2304 7.656948 TCTTGCCTTTTGGTTTTTGATTCATAG 59.343 33.333 0.00 0.00 42.99 2.23
2528 2947 3.869912 GCCTGCAGATACTCACCAAGAAA 60.870 47.826 17.39 0.00 0.00 2.52
2677 3096 3.488569 GGTCCCATCATCGGCCCA 61.489 66.667 0.00 0.00 0.00 5.36
2910 3329 0.741221 GCACCATCCTCGACCTTGAC 60.741 60.000 0.00 0.00 0.00 3.18
2967 3386 5.057149 ACTGACACAACCAGAAGTAATGTC 58.943 41.667 0.00 0.00 41.03 3.06
3370 3804 6.426980 TGATCACAACTGATTACATGAAGC 57.573 37.500 0.00 0.00 37.24 3.86
3391 3825 6.589830 AGCTACGTGATGTGCTTTTATAAG 57.410 37.500 0.00 0.00 33.14 1.73
3421 4362 8.099537 ACAACTGATCTGATATGAACTGAACTT 58.900 33.333 6.60 0.00 0.00 2.66
3514 4489 5.070313 ACTGTGTTTGGCATGGATACTTTTT 59.930 36.000 0.00 0.00 37.61 1.94
3543 4518 5.606761 ACACTTCCCTAACCTAATCCCTTA 58.393 41.667 0.00 0.00 0.00 2.69
3610 4585 2.224744 TGCAGTTTGGAGCTGATAACCA 60.225 45.455 0.00 0.00 36.12 3.67
3623 4603 4.511527 CTGATAACCATGCTGACTGAAGT 58.488 43.478 0.00 0.00 0.00 3.01
3729 4709 4.751767 TCAGGGAACAAGTTTTGCAAAT 57.248 36.364 13.65 0.00 0.00 2.32
3805 4785 6.040247 TGTATCACAGGTTTATACAGAAGCG 58.960 40.000 0.00 0.00 32.57 4.68
4006 4986 2.143122 GAACTTGCATCTGGTTCGTCA 58.857 47.619 0.00 0.00 31.76 4.35
4154 5134 4.636206 GGTGGACTGGTGAAATATCTGTTC 59.364 45.833 0.00 0.00 0.00 3.18
4175 5155 4.415735 TCTCGAATGAAGAACACTGATCG 58.584 43.478 0.00 0.00 0.00 3.69
4189 5169 2.036475 ACTGATCGTTGCAGTGTTCTCT 59.964 45.455 0.00 0.00 44.39 3.10
4265 5245 0.109179 TGTTCGGGTAATCGTGGACG 60.109 55.000 0.00 0.00 41.45 4.79
4281 5261 2.224185 TGGACGTCATTAGTTGCAGTGT 60.224 45.455 18.91 0.00 0.00 3.55
4324 5304 2.905075 TGGTCATCATCCGATCACAAC 58.095 47.619 0.00 0.00 0.00 3.32
4354 5334 5.707298 ACTTGGGAATTGACTACTGAATGTG 59.293 40.000 0.00 0.00 0.00 3.21
4412 5392 4.462483 AGGTGGTGTGGCTTACATTTTATG 59.538 41.667 0.00 0.00 42.24 1.90
4497 5477 4.632153 GCTCACTTTACTCCTCTCAAACA 58.368 43.478 0.00 0.00 0.00 2.83
4527 5507 6.773976 TGTTTGATTCCTTTTGAACTCTGT 57.226 33.333 0.00 0.00 35.31 3.41
4540 5520 0.743688 ACTCTGTAGGAGATGCAGCG 59.256 55.000 0.00 0.00 44.45 5.18
4577 5557 4.366684 CAAGGTGCCCCTGTCCCC 62.367 72.222 0.00 0.00 41.56 4.81
4643 5624 4.852991 ATTATCCCCTCTTCAGGTAGGA 57.147 45.455 0.00 0.00 38.30 2.94
4650 5631 4.294347 CCCTCTTCAGGTAGGATCTTTCT 58.706 47.826 0.00 0.00 38.30 2.52
4654 5635 5.533112 TCTTCAGGTAGGATCTTTCTGGAT 58.467 41.667 7.62 0.00 0.00 3.41
4657 5638 7.623677 TCTTCAGGTAGGATCTTTCTGGATTTA 59.376 37.037 7.62 0.00 0.00 1.40
4671 5652 7.798596 TTCTGGATTTATTCTCTTGCATCTC 57.201 36.000 0.00 0.00 0.00 2.75
4711 5739 1.588932 CCATCCATCGACGACCACG 60.589 63.158 0.00 0.00 45.75 4.94
4714 5742 4.470170 CCATCGACGACCACGCGA 62.470 66.667 15.93 0.00 45.40 5.87
4716 5744 2.277949 ATCGACGACCACGCGATG 60.278 61.111 15.93 7.49 46.90 3.84
4717 5745 2.757056 ATCGACGACCACGCGATGA 61.757 57.895 15.93 0.00 46.90 2.92
4718 5746 2.914797 ATCGACGACCACGCGATGAC 62.915 60.000 15.93 2.25 46.90 3.06
4719 5747 2.879462 GACGACCACGCGATGACC 60.879 66.667 15.93 2.03 43.96 4.02
4720 5748 4.430765 ACGACCACGCGATGACCC 62.431 66.667 15.93 0.00 43.96 4.46
4721 5749 4.129737 CGACCACGCGATGACCCT 62.130 66.667 15.93 0.00 0.00 4.34
4722 5750 2.509336 GACCACGCGATGACCCTG 60.509 66.667 15.93 0.00 0.00 4.45
4723 5751 4.760047 ACCACGCGATGACCCTGC 62.760 66.667 15.93 0.00 0.00 4.85
4729 5757 4.129737 CGATGACCCTGCCGTCGT 62.130 66.667 0.00 0.00 38.02 4.34
4730 5758 2.202756 GATGACCCTGCCGTCGTC 60.203 66.667 3.10 3.10 40.56 4.20
4731 5759 3.718210 GATGACCCTGCCGTCGTCC 62.718 68.421 6.62 0.00 41.17 4.79
4733 5761 4.436998 GACCCTGCCGTCGTCCAG 62.437 72.222 3.82 3.82 0.00 3.86
4741 5769 3.740397 CGTCGTCCAGCACCCGTA 61.740 66.667 0.00 0.00 0.00 4.02
4742 5770 2.181021 GTCGTCCAGCACCCGTAG 59.819 66.667 0.00 0.00 0.00 3.51
4791 5819 1.586422 CCGCCATGGTGATCTTGTAG 58.414 55.000 27.12 3.11 0.00 2.74
4793 5821 2.477825 CGCCATGGTGATCTTGTAGAG 58.522 52.381 21.19 0.00 0.00 2.43
4803 5831 0.530744 TCTTGTAGAGCGCGAACCAT 59.469 50.000 12.10 0.00 0.00 3.55
4807 5835 3.173668 TGTAGAGCGCGAACCATTTAT 57.826 42.857 12.10 0.00 0.00 1.40
4817 5845 4.214119 CGCGAACCATTTATGATTCTCCAT 59.786 41.667 0.00 0.00 0.00 3.41
4820 5848 6.662616 CGAACCATTTATGATTCTCCATGTC 58.337 40.000 0.00 0.00 0.00 3.06
4821 5849 6.260714 CGAACCATTTATGATTCTCCATGTCA 59.739 38.462 0.00 0.00 0.00 3.58
4822 5850 7.201723 CGAACCATTTATGATTCTCCATGTCAA 60.202 37.037 0.00 0.00 0.00 3.18
4823 5851 7.338800 ACCATTTATGATTCTCCATGTCAAC 57.661 36.000 0.00 0.00 0.00 3.18
4824 5852 6.038603 ACCATTTATGATTCTCCATGTCAACG 59.961 38.462 0.00 0.00 0.00 4.10
4825 5853 6.038603 CCATTTATGATTCTCCATGTCAACGT 59.961 38.462 0.00 0.00 0.00 3.99
4826 5854 7.415541 CCATTTATGATTCTCCATGTCAACGTT 60.416 37.037 0.00 0.00 0.00 3.99
4827 5855 6.662414 TTATGATTCTCCATGTCAACGTTC 57.338 37.500 0.00 0.00 0.00 3.95
4828 5856 4.001618 TGATTCTCCATGTCAACGTTCA 57.998 40.909 0.00 0.00 0.00 3.18
4829 5857 4.578871 TGATTCTCCATGTCAACGTTCAT 58.421 39.130 0.00 0.00 0.00 2.57
4830 5858 4.631377 TGATTCTCCATGTCAACGTTCATC 59.369 41.667 0.00 0.00 0.00 2.92
4831 5859 2.972625 TCTCCATGTCAACGTTCATCC 58.027 47.619 0.00 0.00 0.00 3.51
4832 5860 2.567169 TCTCCATGTCAACGTTCATCCT 59.433 45.455 0.00 0.00 0.00 3.24
4833 5861 3.007940 TCTCCATGTCAACGTTCATCCTT 59.992 43.478 0.00 0.00 0.00 3.36
4834 5862 3.750371 TCCATGTCAACGTTCATCCTTT 58.250 40.909 0.00 0.00 0.00 3.11
4835 5863 4.141287 TCCATGTCAACGTTCATCCTTTT 58.859 39.130 0.00 0.00 0.00 2.27
4836 5864 4.582656 TCCATGTCAACGTTCATCCTTTTT 59.417 37.500 0.00 0.00 0.00 1.94
4885 5913 4.000988 CAGAACCATAGCTTTACAACGGT 58.999 43.478 0.00 0.00 0.00 4.83
4893 5921 1.908066 CTTTACAACGGTGGCGCCTC 61.908 60.000 29.70 24.78 34.25 4.70
4897 5925 4.250305 AACGGTGGCGCCTCTGTT 62.250 61.111 37.61 37.61 35.14 3.16
4932 5960 0.689623 CAGGAAGCTGTTGACCTCCT 59.310 55.000 0.00 0.00 0.00 3.69
4947 5975 3.465403 CCTCCAGGCTCCTGTCGG 61.465 72.222 14.27 9.99 42.15 4.79
4948 5976 4.154347 CTCCAGGCTCCTGTCGGC 62.154 72.222 14.27 0.00 42.15 5.54
4995 6300 3.087906 ATCGGCCCCGGCTTACTT 61.088 61.111 6.90 0.00 41.60 2.24
5006 6311 1.356938 GGCTTACTTGTGGCTCGTAC 58.643 55.000 0.00 0.00 0.00 3.67
5012 6317 0.108804 CTTGTGGCTCGTACGTGGAT 60.109 55.000 16.05 0.00 0.00 3.41
5043 6348 2.818296 GAAGCTTTTCGAGGCGCACG 62.818 60.000 10.83 15.03 0.00 5.34
5045 6350 2.740714 GCTTTTCGAGGCGCACGAT 61.741 57.895 24.32 1.66 39.45 3.73
5057 7287 0.388391 CGCACGATTTTTGGCCATGT 60.388 50.000 6.09 0.00 0.00 3.21
5066 7296 0.482446 TTTGGCCATGTGAACTCCCT 59.518 50.000 6.09 0.00 0.00 4.20
5069 7299 2.401766 GCCATGTGAACTCCCTGCG 61.402 63.158 0.00 0.00 0.00 5.18
5070 7300 1.003355 CCATGTGAACTCCCTGCGT 60.003 57.895 0.00 0.00 0.00 5.24
5071 7301 0.606401 CCATGTGAACTCCCTGCGTT 60.606 55.000 0.00 0.00 0.00 4.84
5104 7334 3.499157 AGCGTCTTGTATCTACGAGGATC 59.501 47.826 0.00 0.00 38.89 3.36
5107 7337 4.750598 CGTCTTGTATCTACGAGGATCTGA 59.249 45.833 5.05 0.00 38.89 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.387947 CGTAGGTTCCGGGGCTGT 61.388 66.667 0.00 0.00 0.00 4.40
13 14 2.868044 GCCTGCTATCACCATTCCGTAG 60.868 54.545 0.00 0.00 0.00 3.51
14 15 1.070134 GCCTGCTATCACCATTCCGTA 59.930 52.381 0.00 0.00 0.00 4.02
15 16 0.179045 GCCTGCTATCACCATTCCGT 60.179 55.000 0.00 0.00 0.00 4.69
16 17 0.107456 AGCCTGCTATCACCATTCCG 59.893 55.000 0.00 0.00 0.00 4.30
17 18 1.875576 CGAGCCTGCTATCACCATTCC 60.876 57.143 0.00 0.00 0.00 3.01
18 19 1.506493 CGAGCCTGCTATCACCATTC 58.494 55.000 0.00 0.00 0.00 2.67
19 20 0.533755 GCGAGCCTGCTATCACCATT 60.534 55.000 0.00 0.00 0.00 3.16
20 21 1.070445 GCGAGCCTGCTATCACCAT 59.930 57.895 0.00 0.00 0.00 3.55
21 22 2.501128 GCGAGCCTGCTATCACCA 59.499 61.111 0.00 0.00 0.00 4.17
22 23 2.629050 TTCGCGAGCCTGCTATCACC 62.629 60.000 9.59 0.00 0.00 4.02
23 24 1.211818 CTTCGCGAGCCTGCTATCAC 61.212 60.000 9.59 0.00 0.00 3.06
24 25 1.066422 CTTCGCGAGCCTGCTATCA 59.934 57.895 9.59 0.00 0.00 2.15
25 26 0.038709 ATCTTCGCGAGCCTGCTATC 60.039 55.000 9.59 0.00 0.00 2.08
26 27 1.201181 CTATCTTCGCGAGCCTGCTAT 59.799 52.381 9.59 0.00 0.00 2.97
27 28 0.593618 CTATCTTCGCGAGCCTGCTA 59.406 55.000 9.59 0.00 0.00 3.49
28 29 1.361993 CTATCTTCGCGAGCCTGCT 59.638 57.895 9.59 0.00 0.00 4.24
29 30 1.663074 CCTATCTTCGCGAGCCTGC 60.663 63.158 9.59 0.00 0.00 4.85
30 31 0.039617 CTCCTATCTTCGCGAGCCTG 60.040 60.000 9.59 1.35 0.00 4.85
31 32 0.466555 ACTCCTATCTTCGCGAGCCT 60.467 55.000 9.59 0.00 0.00 4.58
32 33 0.386113 AACTCCTATCTTCGCGAGCC 59.614 55.000 9.59 0.00 0.00 4.70
33 34 3.044286 GTTAACTCCTATCTTCGCGAGC 58.956 50.000 9.59 0.00 0.00 5.03
34 35 3.315749 AGGTTAACTCCTATCTTCGCGAG 59.684 47.826 9.59 3.89 35.87 5.03
35 36 3.066342 CAGGTTAACTCCTATCTTCGCGA 59.934 47.826 3.71 3.71 35.87 5.87
36 37 3.372954 CAGGTTAACTCCTATCTTCGCG 58.627 50.000 0.00 0.00 35.87 5.87
37 38 3.132467 ACCAGGTTAACTCCTATCTTCGC 59.868 47.826 5.42 0.00 35.87 4.70
38 39 4.401519 TGACCAGGTTAACTCCTATCTTCG 59.598 45.833 5.42 0.00 35.87 3.79
39 40 5.682730 GCTGACCAGGTTAACTCCTATCTTC 60.683 48.000 5.42 0.00 35.87 2.87
40 41 4.162509 GCTGACCAGGTTAACTCCTATCTT 59.837 45.833 5.42 0.00 35.87 2.40
41 42 3.707102 GCTGACCAGGTTAACTCCTATCT 59.293 47.826 5.42 0.00 35.87 1.98
42 43 3.707102 AGCTGACCAGGTTAACTCCTATC 59.293 47.826 5.42 0.00 35.28 2.08
43 44 3.452627 CAGCTGACCAGGTTAACTCCTAT 59.547 47.826 8.42 0.00 36.98 2.57
44 45 2.832129 CAGCTGACCAGGTTAACTCCTA 59.168 50.000 8.42 0.00 36.98 2.94
45 46 1.625818 CAGCTGACCAGGTTAACTCCT 59.374 52.381 8.42 0.00 36.98 3.69
46 47 1.348036 ACAGCTGACCAGGTTAACTCC 59.652 52.381 23.35 0.00 36.98 3.85
47 48 2.841442 ACAGCTGACCAGGTTAACTC 57.159 50.000 23.35 0.00 36.98 3.01
48 49 2.224548 GGAACAGCTGACCAGGTTAACT 60.225 50.000 23.35 0.00 36.98 2.24
49 50 2.152016 GGAACAGCTGACCAGGTTAAC 58.848 52.381 23.35 0.00 36.98 2.01
50 51 2.054799 AGGAACAGCTGACCAGGTTAA 58.945 47.619 23.35 0.00 36.98 2.01
51 52 1.347707 CAGGAACAGCTGACCAGGTTA 59.652 52.381 23.35 0.00 36.98 2.85
52 53 0.109342 CAGGAACAGCTGACCAGGTT 59.891 55.000 23.35 2.02 36.98 3.50
53 54 1.056700 ACAGGAACAGCTGACCAGGT 61.057 55.000 23.35 19.70 40.20 4.00
54 55 0.604780 CACAGGAACAGCTGACCAGG 60.605 60.000 23.35 19.13 0.00 4.45
55 56 0.604780 CCACAGGAACAGCTGACCAG 60.605 60.000 23.35 20.46 0.00 4.00
56 57 1.451504 CCACAGGAACAGCTGACCA 59.548 57.895 23.35 0.00 0.00 4.02
57 58 1.302832 CCCACAGGAACAGCTGACC 60.303 63.158 23.35 21.77 33.47 4.02
58 59 1.754745 TCCCACAGGAACAGCTGAC 59.245 57.895 23.35 13.63 40.08 3.51
59 60 4.311700 TCCCACAGGAACAGCTGA 57.688 55.556 23.35 0.00 40.08 4.26
67 68 0.991920 GGACTCCATTTCCCACAGGA 59.008 55.000 0.00 0.00 41.88 3.86
68 69 3.577389 GGACTCCATTTCCCACAGG 57.423 57.895 0.00 0.00 0.00 4.00
80 81 2.693591 TCATCAACGTCTATGGGACTCC 59.306 50.000 9.47 0.00 42.44 3.85
81 82 4.551388 GATCATCAACGTCTATGGGACTC 58.449 47.826 9.47 1.10 42.44 3.36
82 83 3.322254 GGATCATCAACGTCTATGGGACT 59.678 47.826 9.47 0.00 42.44 3.85
83 84 3.069586 TGGATCATCAACGTCTATGGGAC 59.930 47.826 9.47 0.00 41.28 4.46
84 85 3.069586 GTGGATCATCAACGTCTATGGGA 59.930 47.826 9.47 0.00 0.00 4.37
85 86 3.181466 TGTGGATCATCAACGTCTATGGG 60.181 47.826 9.47 0.00 0.00 4.00
86 87 4.058721 TGTGGATCATCAACGTCTATGG 57.941 45.455 9.47 0.00 0.00 2.74
87 88 5.582269 AGTTTGTGGATCATCAACGTCTATG 59.418 40.000 0.00 0.00 0.00 2.23
88 89 5.582269 CAGTTTGTGGATCATCAACGTCTAT 59.418 40.000 0.00 0.00 0.00 1.98
89 90 4.929211 CAGTTTGTGGATCATCAACGTCTA 59.071 41.667 0.00 0.00 0.00 2.59
90 91 3.748048 CAGTTTGTGGATCATCAACGTCT 59.252 43.478 0.00 0.00 0.00 4.18
91 92 3.667960 GCAGTTTGTGGATCATCAACGTC 60.668 47.826 0.00 0.00 0.00 4.34
92 93 2.226437 GCAGTTTGTGGATCATCAACGT 59.774 45.455 0.00 0.00 0.00 3.99
93 94 2.485426 AGCAGTTTGTGGATCATCAACG 59.515 45.455 0.00 0.00 0.00 4.10
94 95 4.479619 GAAGCAGTTTGTGGATCATCAAC 58.520 43.478 0.00 0.00 0.00 3.18
95 96 3.507233 GGAAGCAGTTTGTGGATCATCAA 59.493 43.478 0.00 0.00 0.00 2.57
96 97 3.084039 GGAAGCAGTTTGTGGATCATCA 58.916 45.455 0.00 0.00 0.00 3.07
97 98 2.096496 CGGAAGCAGTTTGTGGATCATC 59.904 50.000 0.00 0.00 0.00 2.92
98 99 2.086869 CGGAAGCAGTTTGTGGATCAT 58.913 47.619 0.00 0.00 0.00 2.45
99 100 1.522668 CGGAAGCAGTTTGTGGATCA 58.477 50.000 0.00 0.00 0.00 2.92
113 114 1.275291 TCTAGTGGTTGAAGGCGGAAG 59.725 52.381 0.00 0.00 0.00 3.46
114 115 1.344065 TCTAGTGGTTGAAGGCGGAA 58.656 50.000 0.00 0.00 0.00 4.30
115 116 1.344065 TTCTAGTGGTTGAAGGCGGA 58.656 50.000 0.00 0.00 0.00 5.54
116 117 2.178912 TTTCTAGTGGTTGAAGGCGG 57.821 50.000 0.00 0.00 0.00 6.13
117 118 2.875933 TGTTTTCTAGTGGTTGAAGGCG 59.124 45.455 0.00 0.00 0.00 5.52
118 119 5.453567 AATGTTTTCTAGTGGTTGAAGGC 57.546 39.130 0.00 0.00 0.00 4.35
119 120 6.805713 ACAAATGTTTTCTAGTGGTTGAAGG 58.194 36.000 0.00 0.00 0.00 3.46
120 121 7.759433 ACAACAAATGTTTTCTAGTGGTTGAAG 59.241 33.333 0.00 0.00 40.06 3.02
121 122 7.607250 ACAACAAATGTTTTCTAGTGGTTGAA 58.393 30.769 0.00 0.00 40.06 2.69
122 123 7.164230 ACAACAAATGTTTTCTAGTGGTTGA 57.836 32.000 0.00 0.00 40.06 3.18
123 124 8.188139 AGTACAACAAATGTTTTCTAGTGGTTG 58.812 33.333 0.00 0.00 43.63 3.77
124 125 8.288689 AGTACAACAAATGTTTTCTAGTGGTT 57.711 30.769 0.00 0.00 43.63 3.67
125 126 7.554835 TGAGTACAACAAATGTTTTCTAGTGGT 59.445 33.333 0.00 0.00 43.63 4.16
126 127 7.855904 GTGAGTACAACAAATGTTTTCTAGTGG 59.144 37.037 0.00 0.00 43.63 4.00
127 128 8.394877 TGTGAGTACAACAAATGTTTTCTAGTG 58.605 33.333 0.00 0.00 43.63 2.74
128 129 8.500753 TGTGAGTACAACAAATGTTTTCTAGT 57.499 30.769 0.00 0.00 43.63 2.57
129 130 8.826710 TCTGTGAGTACAACAAATGTTTTCTAG 58.173 33.333 0.00 0.00 43.63 2.43
130 131 8.609176 GTCTGTGAGTACAACAAATGTTTTCTA 58.391 33.333 0.00 0.00 43.63 2.10
131 132 7.415206 GGTCTGTGAGTACAACAAATGTTTTCT 60.415 37.037 0.00 0.00 43.63 2.52
132 133 6.691388 GGTCTGTGAGTACAACAAATGTTTTC 59.309 38.462 0.00 0.00 43.63 2.29
133 134 6.151985 TGGTCTGTGAGTACAACAAATGTTTT 59.848 34.615 0.00 0.00 43.63 2.43
134 135 5.650266 TGGTCTGTGAGTACAACAAATGTTT 59.350 36.000 0.00 0.00 43.63 2.83
135 136 5.189928 TGGTCTGTGAGTACAACAAATGTT 58.810 37.500 0.00 0.00 43.63 2.71
136 137 4.776349 TGGTCTGTGAGTACAACAAATGT 58.224 39.130 0.00 0.00 46.36 2.71
137 138 5.056480 TCTGGTCTGTGAGTACAACAAATG 58.944 41.667 0.00 0.00 36.14 2.32
138 139 5.290493 TCTGGTCTGTGAGTACAACAAAT 57.710 39.130 0.00 0.00 36.14 2.32
139 140 4.746535 TCTGGTCTGTGAGTACAACAAA 57.253 40.909 0.00 0.00 36.14 2.83
140 141 4.746535 TTCTGGTCTGTGAGTACAACAA 57.253 40.909 0.00 0.00 36.14 2.83
141 142 4.503123 CCATTCTGGTCTGTGAGTACAACA 60.503 45.833 0.00 0.00 32.22 3.33
142 143 3.997021 CCATTCTGGTCTGTGAGTACAAC 59.003 47.826 0.00 0.00 32.22 3.32
143 144 4.271696 CCATTCTGGTCTGTGAGTACAA 57.728 45.455 0.00 0.00 32.22 2.41
144 145 3.961480 CCATTCTGGTCTGTGAGTACA 57.039 47.619 0.00 0.00 31.35 2.90
156 157 3.057969 TGCAGTACAAGACCATTCTGG 57.942 47.619 0.00 0.00 45.02 3.86
157 158 6.932356 AATATGCAGTACAAGACCATTCTG 57.068 37.500 0.00 0.00 29.98 3.02
158 159 7.944729 AAAATATGCAGTACAAGACCATTCT 57.055 32.000 0.00 0.00 0.00 2.40
168 169 9.149225 CCAAGCAAAATAAAAATATGCAGTACA 57.851 29.630 0.00 0.00 39.42 2.90
169 170 9.364989 TCCAAGCAAAATAAAAATATGCAGTAC 57.635 29.630 0.00 0.00 39.42 2.73
170 171 9.935241 TTCCAAGCAAAATAAAAATATGCAGTA 57.065 25.926 0.00 0.00 39.42 2.74
171 172 8.845413 TTCCAAGCAAAATAAAAATATGCAGT 57.155 26.923 0.00 0.00 39.42 4.40
183 184 9.859427 CTTGATACAGAAATTCCAAGCAAAATA 57.141 29.630 0.00 0.00 0.00 1.40
184 185 8.370182 ACTTGATACAGAAATTCCAAGCAAAAT 58.630 29.630 8.24 0.00 35.67 1.82
185 186 7.725251 ACTTGATACAGAAATTCCAAGCAAAA 58.275 30.769 8.24 0.00 35.67 2.44
186 187 7.288810 ACTTGATACAGAAATTCCAAGCAAA 57.711 32.000 8.24 0.00 35.67 3.68
187 188 6.899393 ACTTGATACAGAAATTCCAAGCAA 57.101 33.333 8.24 1.27 35.67 3.91
188 189 6.294675 CCAACTTGATACAGAAATTCCAAGCA 60.295 38.462 8.24 0.00 35.67 3.91
189 190 6.095377 CCAACTTGATACAGAAATTCCAAGC 58.905 40.000 8.24 0.00 35.67 4.01
190 191 7.086376 CACCAACTTGATACAGAAATTCCAAG 58.914 38.462 7.18 7.18 37.57 3.61
191 192 6.516527 GCACCAACTTGATACAGAAATTCCAA 60.517 38.462 0.00 0.00 0.00 3.53
192 193 5.048083 GCACCAACTTGATACAGAAATTCCA 60.048 40.000 0.00 0.00 0.00 3.53
193 194 5.402398 GCACCAACTTGATACAGAAATTCC 58.598 41.667 0.00 0.00 0.00 3.01
194 195 5.183904 AGGCACCAACTTGATACAGAAATTC 59.816 40.000 0.00 0.00 0.00 2.17
195 196 5.079643 AGGCACCAACTTGATACAGAAATT 58.920 37.500 0.00 0.00 0.00 1.82
196 197 4.666512 AGGCACCAACTTGATACAGAAAT 58.333 39.130 0.00 0.00 0.00 2.17
197 198 4.072131 GAGGCACCAACTTGATACAGAAA 58.928 43.478 0.00 0.00 0.00 2.52
198 199 3.072330 TGAGGCACCAACTTGATACAGAA 59.928 43.478 0.00 0.00 0.00 3.02
199 200 2.637382 TGAGGCACCAACTTGATACAGA 59.363 45.455 0.00 0.00 0.00 3.41
200 201 3.057969 TGAGGCACCAACTTGATACAG 57.942 47.619 0.00 0.00 0.00 2.74
201 202 3.008923 TGATGAGGCACCAACTTGATACA 59.991 43.478 0.00 0.00 0.00 2.29
202 203 3.609853 TGATGAGGCACCAACTTGATAC 58.390 45.455 0.00 0.00 0.00 2.24
203 204 3.877559 CTGATGAGGCACCAACTTGATA 58.122 45.455 0.00 0.00 0.00 2.15
204 205 2.719739 CTGATGAGGCACCAACTTGAT 58.280 47.619 0.00 0.00 0.00 2.57
205 206 1.883638 GCTGATGAGGCACCAACTTGA 60.884 52.381 0.00 0.00 0.00 3.02
206 207 0.524862 GCTGATGAGGCACCAACTTG 59.475 55.000 0.00 0.00 0.00 3.16
207 208 0.403271 AGCTGATGAGGCACCAACTT 59.597 50.000 0.00 0.00 0.00 2.66
208 209 1.279496 TAGCTGATGAGGCACCAACT 58.721 50.000 0.00 0.00 0.00 3.16
209 210 1.740025 GTTAGCTGATGAGGCACCAAC 59.260 52.381 0.00 0.00 0.00 3.77
210 211 1.350684 TGTTAGCTGATGAGGCACCAA 59.649 47.619 0.00 0.00 0.00 3.67
211 212 0.983467 TGTTAGCTGATGAGGCACCA 59.017 50.000 0.00 0.00 0.00 4.17
212 213 1.065854 ACTGTTAGCTGATGAGGCACC 60.066 52.381 0.00 0.00 0.00 5.01
213 214 2.393271 ACTGTTAGCTGATGAGGCAC 57.607 50.000 0.00 0.00 0.00 5.01
214 215 4.443457 GGATTACTGTTAGCTGATGAGGCA 60.443 45.833 0.00 0.00 0.00 4.75
215 216 4.061596 GGATTACTGTTAGCTGATGAGGC 58.938 47.826 0.00 0.00 0.00 4.70
216 217 5.295950 CAGGATTACTGTTAGCTGATGAGG 58.704 45.833 0.00 0.00 42.42 3.86
217 218 5.295950 CCAGGATTACTGTTAGCTGATGAG 58.704 45.833 0.00 0.00 46.06 2.90
218 219 4.101585 CCCAGGATTACTGTTAGCTGATGA 59.898 45.833 0.00 0.00 46.06 2.92
219 220 4.384056 CCCAGGATTACTGTTAGCTGATG 58.616 47.826 0.00 0.00 46.06 3.07
220 221 3.392616 CCCCAGGATTACTGTTAGCTGAT 59.607 47.826 0.00 0.00 46.06 2.90
221 222 2.771943 CCCCAGGATTACTGTTAGCTGA 59.228 50.000 0.00 0.00 46.06 4.26
222 223 2.746472 GCCCCAGGATTACTGTTAGCTG 60.746 54.545 0.00 0.00 46.06 4.24
223 224 1.490910 GCCCCAGGATTACTGTTAGCT 59.509 52.381 0.00 0.00 46.06 3.32
224 225 1.490910 AGCCCCAGGATTACTGTTAGC 59.509 52.381 0.00 0.00 46.06 3.09
225 226 2.771943 TCAGCCCCAGGATTACTGTTAG 59.228 50.000 0.00 0.00 46.06 2.34
226 227 2.840511 TCAGCCCCAGGATTACTGTTA 58.159 47.619 0.00 0.00 46.06 2.41
227 228 1.668826 TCAGCCCCAGGATTACTGTT 58.331 50.000 0.00 0.00 46.06 3.16
228 229 1.492176 CATCAGCCCCAGGATTACTGT 59.508 52.381 0.00 0.00 46.06 3.55
229 230 5.933691 GCTCATCAGCCCCAGGATTACTG 62.934 56.522 0.00 0.00 42.46 2.74
230 231 2.053244 CTCATCAGCCCCAGGATTACT 58.947 52.381 0.00 0.00 0.00 2.24
231 232 1.544314 GCTCATCAGCCCCAGGATTAC 60.544 57.143 0.00 0.00 40.14 1.89
232 233 0.767375 GCTCATCAGCCCCAGGATTA 59.233 55.000 0.00 0.00 40.14 1.75
233 234 1.284111 TGCTCATCAGCCCCAGGATT 61.284 55.000 0.00 0.00 46.26 3.01
234 235 1.695239 TGCTCATCAGCCCCAGGAT 60.695 57.895 0.00 0.00 46.26 3.24
235 236 2.285592 TGCTCATCAGCCCCAGGA 60.286 61.111 0.00 0.00 46.26 3.86
236 237 2.124403 GTGCTCATCAGCCCCAGG 60.124 66.667 0.00 0.00 46.26 4.45
237 238 1.001764 TTGTGCTCATCAGCCCCAG 60.002 57.895 0.00 0.00 46.26 4.45
238 239 1.001764 CTTGTGCTCATCAGCCCCA 60.002 57.895 0.00 0.00 46.26 4.96
239 240 1.751927 CCTTGTGCTCATCAGCCCC 60.752 63.158 0.00 0.00 46.26 5.80
240 241 1.751927 CCCTTGTGCTCATCAGCCC 60.752 63.158 0.00 0.00 46.26 5.19
241 242 2.413142 GCCCTTGTGCTCATCAGCC 61.413 63.158 0.00 0.00 46.26 4.85
243 244 0.395311 ATGGCCCTTGTGCTCATCAG 60.395 55.000 0.00 0.00 0.00 2.90
244 245 0.040058 AATGGCCCTTGTGCTCATCA 59.960 50.000 0.00 0.00 0.00 3.07
245 246 1.188863 AAATGGCCCTTGTGCTCATC 58.811 50.000 0.00 0.00 0.00 2.92
246 247 1.551883 GAAAATGGCCCTTGTGCTCAT 59.448 47.619 0.00 0.00 0.00 2.90
247 248 0.968405 GAAAATGGCCCTTGTGCTCA 59.032 50.000 0.00 0.00 0.00 4.26
248 249 1.067354 CAGAAAATGGCCCTTGTGCTC 60.067 52.381 0.00 0.00 0.00 4.26
249 250 0.971386 CAGAAAATGGCCCTTGTGCT 59.029 50.000 0.00 0.00 0.00 4.40
250 251 0.037046 CCAGAAAATGGCCCTTGTGC 60.037 55.000 0.00 0.00 43.83 4.57
260 261 7.341445 TCCGGGTATTAATTTCCAGAAAATG 57.659 36.000 0.00 0.00 37.64 2.32
261 262 7.964666 TTCCGGGTATTAATTTCCAGAAAAT 57.035 32.000 0.00 0.00 39.30 1.82
262 263 7.778185 TTTCCGGGTATTAATTTCCAGAAAA 57.222 32.000 0.00 4.03 33.56 2.29
263 264 7.309928 GGTTTTCCGGGTATTAATTTCCAGAAA 60.310 37.037 0.00 11.17 34.46 2.52
264 265 6.153170 GGTTTTCCGGGTATTAATTTCCAGAA 59.847 38.462 0.00 0.00 0.00 3.02
265 266 5.653330 GGTTTTCCGGGTATTAATTTCCAGA 59.347 40.000 0.00 0.00 0.00 3.86
266 267 5.898174 GGTTTTCCGGGTATTAATTTCCAG 58.102 41.667 0.00 0.00 0.00 3.86
267 268 5.918426 GGTTTTCCGGGTATTAATTTCCA 57.082 39.130 0.00 0.00 0.00 3.53
282 283 1.009335 GTGTCGCAACCGGTTTTCC 60.009 57.895 19.55 8.22 34.56 3.13
283 284 0.309612 ATGTGTCGCAACCGGTTTTC 59.690 50.000 19.55 11.70 34.56 2.29
284 285 1.595466 TATGTGTCGCAACCGGTTTT 58.405 45.000 19.55 0.00 34.56 2.43
285 286 1.466950 CATATGTGTCGCAACCGGTTT 59.533 47.619 19.55 2.67 34.56 3.27
286 287 1.083489 CATATGTGTCGCAACCGGTT 58.917 50.000 15.86 15.86 34.56 4.44
287 288 0.036765 ACATATGTGTCGCAACCGGT 60.037 50.000 7.78 0.00 31.41 5.28
288 289 1.929230 TACATATGTGTCGCAACCGG 58.071 50.000 18.81 0.00 39.77 5.28
289 290 5.839262 ATAATACATATGTGTCGCAACCG 57.161 39.130 18.81 0.00 39.77 4.44
290 291 9.938670 TTTTAATAATACATATGTGTCGCAACC 57.061 29.630 18.81 0.00 39.77 3.77
293 294 9.549078 TCCTTTTAATAATACATATGTGTCGCA 57.451 29.630 18.81 0.00 39.77 5.10
325 326 5.380043 TGCCATGCCCTTCAAAAATAAAAA 58.620 33.333 0.00 0.00 0.00 1.94
340 341 9.927668 ATTGTTACTAATAATAAATGCCATGCC 57.072 29.630 0.00 0.00 0.00 4.40
384 385 7.115378 CAGTCATAAAAGTGCCATTCTTTTCAC 59.885 37.037 6.87 4.29 41.96 3.18
386 387 7.370383 TCAGTCATAAAAGTGCCATTCTTTTC 58.630 34.615 6.87 0.00 41.96 2.29
392 393 5.809001 TCTCTCAGTCATAAAAGTGCCATT 58.191 37.500 0.00 0.00 0.00 3.16
396 397 4.092091 CCGTTCTCTCAGTCATAAAAGTGC 59.908 45.833 0.00 0.00 0.00 4.40
399 400 4.245660 TGCCGTTCTCTCAGTCATAAAAG 58.754 43.478 0.00 0.00 0.00 2.27
410 411 9.010366 GTCAATAATTAAAAATGCCGTTCTCTC 57.990 33.333 0.00 0.00 0.00 3.20
413 416 7.759433 CCTGTCAATAATTAAAAATGCCGTTCT 59.241 33.333 0.00 0.00 0.00 3.01
414 417 7.544217 ACCTGTCAATAATTAAAAATGCCGTTC 59.456 33.333 0.00 0.00 0.00 3.95
415 418 7.330700 CACCTGTCAATAATTAAAAATGCCGTT 59.669 33.333 0.00 0.00 0.00 4.44
416 419 6.811170 CACCTGTCAATAATTAAAAATGCCGT 59.189 34.615 0.00 0.00 0.00 5.68
417 420 6.255453 CCACCTGTCAATAATTAAAAATGCCG 59.745 38.462 0.00 0.00 0.00 5.69
418 421 6.037062 GCCACCTGTCAATAATTAAAAATGCC 59.963 38.462 0.00 0.00 0.00 4.40
419 422 6.593382 TGCCACCTGTCAATAATTAAAAATGC 59.407 34.615 0.00 0.00 0.00 3.56
420 423 7.818930 ACTGCCACCTGTCAATAATTAAAAATG 59.181 33.333 0.00 0.00 0.00 2.32
434 437 5.596845 TCAAAAATAAAACTGCCACCTGTC 58.403 37.500 0.00 0.00 0.00 3.51
505 508 7.869429 CCTATTGACATTAAAAATGCCATCCTC 59.131 37.037 0.00 0.00 0.00 3.71
618 621 2.171568 ATGAGACTGCCATCCTCTGA 57.828 50.000 0.00 0.00 0.00 3.27
619 622 4.141756 ACTTTATGAGACTGCCATCCTCTG 60.142 45.833 0.00 0.00 0.00 3.35
620 623 4.036518 ACTTTATGAGACTGCCATCCTCT 58.963 43.478 0.00 0.00 0.00 3.69
621 624 4.414337 ACTTTATGAGACTGCCATCCTC 57.586 45.455 0.00 0.00 0.00 3.71
622 625 4.851639 AACTTTATGAGACTGCCATCCT 57.148 40.909 0.00 0.00 0.00 3.24
745 749 3.081804 ACTTAAAAACTGCCATCCTCCG 58.918 45.455 0.00 0.00 0.00 4.63
987 1018 1.065418 AGATCCATCGGCCGAAAGTTT 60.065 47.619 34.66 13.09 0.00 2.66
991 1022 1.048724 AGGAGATCCATCGGCCGAAA 61.049 55.000 34.66 21.01 38.89 3.46
1134 1258 1.004361 GGGAGGAGGTGGTGGGTAT 59.996 63.158 0.00 0.00 0.00 2.73
1301 1428 3.077556 CCTCACCTGGGGAGTCGG 61.078 72.222 23.81 6.77 0.00 4.79
1342 1469 2.949177 TATCCAACTTGTGCAGTGGT 57.051 45.000 0.00 0.00 35.12 4.16
1393 1520 6.754675 TGCATATTCAGACATCAATTTTGCAG 59.245 34.615 0.00 0.00 31.54 4.41
1394 1521 6.631962 TGCATATTCAGACATCAATTTTGCA 58.368 32.000 0.00 0.00 32.16 4.08
1409 1543 6.778834 ACATTTGGACAGAATGCATATTCA 57.221 33.333 0.00 0.00 44.14 2.57
1421 1555 6.346919 CGAGTCTCACTTAAACATTTGGACAG 60.347 42.308 0.00 0.00 0.00 3.51
1424 1558 5.465390 CACGAGTCTCACTTAAACATTTGGA 59.535 40.000 0.00 0.00 0.00 3.53
1429 1563 5.196341 TGACACGAGTCTCACTTAAACAT 57.804 39.130 14.15 0.00 45.20 2.71
1432 1592 5.707242 AGATGACACGAGTCTCACTTAAA 57.293 39.130 14.15 0.00 45.20 1.52
1434 1594 5.880887 ACATAGATGACACGAGTCTCACTTA 59.119 40.000 14.15 1.27 45.20 2.24
1443 1603 9.737427 AAGTTTATCTTACATAGATGACACGAG 57.263 33.333 0.00 0.00 43.52 4.18
1450 1610 7.653713 ACGGCTCAAGTTTATCTTACATAGATG 59.346 37.037 0.00 0.00 43.52 2.90
1451 1611 7.727181 ACGGCTCAAGTTTATCTTACATAGAT 58.273 34.615 0.00 0.00 45.59 1.98
1452 1612 7.108841 ACGGCTCAAGTTTATCTTACATAGA 57.891 36.000 0.00 0.00 37.28 1.98
1453 1613 6.978659 TGACGGCTCAAGTTTATCTTACATAG 59.021 38.462 0.00 0.00 34.66 2.23
1455 1615 5.730550 TGACGGCTCAAGTTTATCTTACAT 58.269 37.500 0.00 0.00 34.66 2.29
1457 1617 6.508088 CGAATGACGGCTCAAGTTTATCTTAC 60.508 42.308 0.00 0.00 38.46 2.34
1524 1687 9.059260 GTTCAACCATTACCGGTATGTAAATAT 57.941 33.333 16.67 0.42 38.76 1.28
1561 1728 5.121811 CAGTAATTCTCCACAATCCCTCAG 58.878 45.833 0.00 0.00 0.00 3.35
1567 1734 7.339466 ACATTTACCCAGTAATTCTCCACAATC 59.661 37.037 0.00 0.00 0.00 2.67
1582 1749 9.357652 CAGACATTTTAATTCACATTTACCCAG 57.642 33.333 0.00 0.00 0.00 4.45
1625 1802 2.335316 ACGTACAAAACAGGGCTTCA 57.665 45.000 0.00 0.00 0.00 3.02
1641 1818 7.391148 AAGAAGCCAAATATCACAATAACGT 57.609 32.000 0.00 0.00 0.00 3.99
1646 1823 8.034804 GGTGTTTAAGAAGCCAAATATCACAAT 58.965 33.333 0.00 0.00 0.00 2.71
1648 1825 6.491745 TGGTGTTTAAGAAGCCAAATATCACA 59.508 34.615 0.00 0.00 0.00 3.58
1677 1931 3.539604 AGAGCATATGAGCAAGGAACAC 58.460 45.455 6.97 0.00 36.85 3.32
1784 2038 4.279169 CAGGTGAACTGTTGTTTGATCCAT 59.721 41.667 0.00 0.00 42.42 3.41
1807 2061 3.722147 TCAAAGACACTGAGAGCTTCAC 58.278 45.455 0.00 0.00 0.00 3.18
1868 2122 8.465999 CAGAGAATATCTACATACCATGACTCC 58.534 40.741 0.00 0.00 36.10 3.85
1955 2232 3.678056 AACGTGCAATCCTAGAGAACA 57.322 42.857 0.00 0.00 0.00 3.18
1980 2257 7.659799 GGCAAGAACCCTACATTTGTTTTAAAT 59.340 33.333 0.00 0.00 0.00 1.40
1998 2276 6.093357 TGAATCAAAAACCAAAAGGCAAGAAC 59.907 34.615 0.00 0.00 0.00 3.01
2124 2525 9.546909 CTTAACTTTACAACTGCTGTCATTATG 57.453 33.333 0.00 0.00 39.64 1.90
2454 2873 6.497624 ACAGAGAGCAAGATTATCCTGAAT 57.502 37.500 0.00 0.00 0.00 2.57
2485 2904 9.748708 GCAGGCAATAATGTTCTAATTGAATAA 57.251 29.630 0.00 0.00 36.99 1.40
2509 2928 4.350368 TGTTTCTTGGTGAGTATCTGCA 57.650 40.909 0.00 0.00 34.92 4.41
2528 2947 5.278660 GCAAGAAGATGTCCTGTGAATTTGT 60.279 40.000 0.00 0.00 0.00 2.83
2910 3329 1.093159 GCTTCCCATCAGCACTGAAG 58.907 55.000 4.14 0.00 43.58 3.02
3207 3640 2.913777 GTGAAAATACCTTCACGGGC 57.086 50.000 1.08 0.00 44.13 6.13
3391 3825 9.755804 TCAGTTCATATCAGATCAGTTGTTATC 57.244 33.333 0.00 0.00 0.00 1.75
3433 4374 5.327737 TTGGGTTAGGTAGTCCATTTTGT 57.672 39.130 0.00 0.00 35.89 2.83
3514 4489 8.496916 GGGATTAGGTTAGGGAAGTGTTAATTA 58.503 37.037 0.00 0.00 0.00 1.40
3538 4513 0.457851 CTGCTGGAGAGTCGTAAGGG 59.542 60.000 0.00 0.00 38.47 3.95
3543 4518 2.969016 CAGCTGCTGGAGAGTCGT 59.031 61.111 21.71 0.00 0.00 4.34
3610 4585 6.701340 TGTTATGAGTAACTTCAGTCAGCAT 58.299 36.000 0.00 0.00 40.66 3.79
3643 4623 7.479980 TGAAACAGGAACATTTAGTCAAACAG 58.520 34.615 0.00 0.00 0.00 3.16
3644 4624 7.397892 TGAAACAGGAACATTTAGTCAAACA 57.602 32.000 0.00 0.00 0.00 2.83
3656 4636 6.942005 AGATACATCAACATGAAACAGGAACA 59.058 34.615 0.00 0.00 33.72 3.18
3699 4679 1.956477 CTTGTTCCCTGAAACACCCAG 59.044 52.381 0.00 0.00 38.80 4.45
3805 4785 0.468226 TCACACAGGGACAGGTGAAC 59.532 55.000 0.00 0.00 38.84 3.18
4154 5134 4.169508 ACGATCAGTGTTCTTCATTCGAG 58.830 43.478 0.00 0.00 0.00 4.04
4175 5155 2.191128 ATCCCAGAGAACACTGCAAC 57.809 50.000 0.00 0.00 36.67 4.17
4189 5169 4.724399 TGAAACTGCAGTTAGAAATCCCA 58.276 39.130 31.31 15.44 37.25 4.37
4265 5245 3.315191 ACCAACACACTGCAACTAATGAC 59.685 43.478 0.00 0.00 0.00 3.06
4281 5261 3.866703 TGTGTTCCCATCTAACCAACA 57.133 42.857 0.00 0.00 0.00 3.33
4324 5304 1.608590 AGTCAATTCCCAAGTGCGTTG 59.391 47.619 0.00 0.00 35.71 4.10
4354 5334 6.635030 AGTTTTCAAGATTTCACCTGGTAC 57.365 37.500 0.00 0.00 0.00 3.34
4412 5392 6.537355 TGATTCAAATCATCCTACTCCATCC 58.463 40.000 1.30 0.00 40.32 3.51
4473 5453 2.515854 TGAGAGGAGTAAAGTGAGCGT 58.484 47.619 0.00 0.00 0.00 5.07
4474 5454 3.577649 TTGAGAGGAGTAAAGTGAGCG 57.422 47.619 0.00 0.00 0.00 5.03
4497 5477 6.232581 TCAAAAGGAATCAAACATGTGGTT 57.767 33.333 0.00 0.00 42.98 3.67
4527 5507 3.094062 GCCACCGCTGCATCTCCTA 62.094 63.158 0.00 0.00 0.00 2.94
4577 5557 4.458295 CCCAGCATTAAGGAGCAGAATATG 59.542 45.833 0.00 0.00 0.00 1.78
4643 5624 8.763984 ATGCAAGAGAATAAATCCAGAAAGAT 57.236 30.769 0.00 0.00 0.00 2.40
4650 5631 5.530171 GCAGAGATGCAAGAGAATAAATCCA 59.470 40.000 0.00 0.00 34.41 3.41
4654 5635 3.873361 CCGCAGAGATGCAAGAGAATAAA 59.127 43.478 0.00 0.00 34.41 1.40
4657 5638 1.950828 CCGCAGAGATGCAAGAGAAT 58.049 50.000 0.00 0.00 34.41 2.40
4678 5659 3.385749 ATGGGTCCCATGACGACGC 62.386 63.158 23.47 17.53 43.39 5.19
4679 5660 1.227263 GATGGGTCCCATGACGACG 60.227 63.158 28.98 0.00 45.26 5.12
4680 5661 1.146263 GGATGGGTCCCATGACGAC 59.854 63.158 28.98 12.85 45.26 4.34
4683 5664 0.250467 CGATGGATGGGTCCCATGAC 60.250 60.000 28.98 19.86 45.26 3.06
4684 5665 0.399806 TCGATGGATGGGTCCCATGA 60.400 55.000 28.98 15.46 45.26 3.07
4685 5666 0.250467 GTCGATGGATGGGTCCCATG 60.250 60.000 28.98 13.26 45.26 3.66
4687 5668 2.431454 CGTCGATGGATGGGTCCCA 61.431 63.158 14.64 14.64 44.41 4.37
4688 5669 2.131709 TCGTCGATGGATGGGTCCC 61.132 63.158 0.00 0.00 44.41 4.46
4689 5670 1.067582 GTCGTCGATGGATGGGTCC 59.932 63.158 4.48 0.00 45.31 4.46
4690 5671 1.067582 GGTCGTCGATGGATGGGTC 59.932 63.158 4.48 0.00 0.00 4.46
4691 5672 1.684391 TGGTCGTCGATGGATGGGT 60.684 57.895 4.48 0.00 0.00 4.51
4714 5742 3.771160 GGACGACGGCAGGGTCAT 61.771 66.667 1.63 0.00 36.73 3.06
4716 5744 4.436998 CTGGACGACGGCAGGGTC 62.437 72.222 1.63 2.51 0.00 4.46
4724 5752 3.678717 CTACGGGTGCTGGACGACG 62.679 68.421 11.99 11.99 0.00 5.12
4725 5753 2.181021 CTACGGGTGCTGGACGAC 59.819 66.667 0.00 0.00 0.00 4.34
4726 5754 3.066190 CCTACGGGTGCTGGACGA 61.066 66.667 0.00 0.00 0.00 4.20
4727 5755 4.143333 CCCTACGGGTGCTGGACG 62.143 72.222 0.00 0.00 38.25 4.79
4728 5756 3.782443 CCCCTACGGGTGCTGGAC 61.782 72.222 0.00 0.00 45.50 4.02
4737 5765 1.437986 CTTCGAGAAGCCCCTACGG 59.562 63.158 0.00 0.00 0.00 4.02
4749 5777 1.380524 TCGAGGGAGTTAGCTTCGAG 58.619 55.000 0.00 0.00 35.60 4.04
4781 5809 1.469251 GGTTCGCGCTCTACAAGATCA 60.469 52.381 5.56 0.00 0.00 2.92
4791 5819 3.545633 GAATCATAAATGGTTCGCGCTC 58.454 45.455 5.56 0.00 38.06 5.03
4803 5831 6.652900 TGAACGTTGACATGGAGAATCATAAA 59.347 34.615 5.00 0.00 36.25 1.40
4807 5835 4.001618 TGAACGTTGACATGGAGAATCA 57.998 40.909 5.00 0.00 36.25 2.57
4838 5866 4.011023 TGAACGTTGACTTCCCTCAAAAA 58.989 39.130 5.00 0.00 31.90 1.94
4839 5867 3.611970 TGAACGTTGACTTCCCTCAAAA 58.388 40.909 5.00 0.00 31.90 2.44
4840 5868 3.269538 TGAACGTTGACTTCCCTCAAA 57.730 42.857 5.00 0.00 31.90 2.69
4841 5869 2.992124 TGAACGTTGACTTCCCTCAA 57.008 45.000 5.00 0.00 0.00 3.02
4842 5870 2.289444 GGATGAACGTTGACTTCCCTCA 60.289 50.000 5.00 0.00 0.00 3.86
4843 5871 2.289444 TGGATGAACGTTGACTTCCCTC 60.289 50.000 5.00 0.00 31.92 4.30
4844 5872 1.697432 TGGATGAACGTTGACTTCCCT 59.303 47.619 5.00 0.00 31.92 4.20
4845 5873 2.076863 CTGGATGAACGTTGACTTCCC 58.923 52.381 5.00 0.00 31.92 3.97
4846 5874 3.040147 TCTGGATGAACGTTGACTTCC 57.960 47.619 5.00 10.08 0.00 3.46
4847 5875 4.391140 GTTCTGGATGAACGTTGACTTC 57.609 45.455 5.00 0.00 44.49 3.01
4875 5903 1.962306 GAGGCGCCACCGTTGTAAA 60.962 57.895 31.54 0.00 46.52 2.01
4920 5948 1.197430 AGCCTGGAGGAGGTCAACAG 61.197 60.000 0.00 0.00 44.97 3.16
4949 5977 2.698763 GGACCCTCTCGTCGACCAC 61.699 68.421 10.58 0.00 33.30 4.16
4950 5978 2.360852 GGACCCTCTCGTCGACCA 60.361 66.667 10.58 0.00 33.30 4.02
4951 5979 0.465097 TATGGACCCTCTCGTCGACC 60.465 60.000 10.58 0.00 33.30 4.79
4989 6294 1.983605 CACGTACGAGCCACAAGTAAG 59.016 52.381 24.41 0.00 0.00 2.34
4995 6300 0.452987 GTATCCACGTACGAGCCACA 59.547 55.000 24.41 0.00 0.00 4.17
5006 6311 3.686128 CTTCTCGAGTCTTGTATCCACG 58.314 50.000 13.13 0.00 0.00 4.94
5012 6317 4.023450 TCGAAAAGCTTCTCGAGTCTTGTA 60.023 41.667 20.48 0.00 39.07 2.41
5024 6329 1.154395 GTGCGCCTCGAAAAGCTTC 60.154 57.895 4.18 0.00 0.00 3.86
5043 6348 3.588955 GGAGTTCACATGGCCAAAAATC 58.411 45.455 10.96 10.74 0.00 2.17
5045 6350 1.691434 GGGAGTTCACATGGCCAAAAA 59.309 47.619 10.96 0.00 0.00 1.94
5069 7299 0.664767 AGACGCTCGAGTTGCTGAAC 60.665 55.000 15.13 0.00 0.00 3.18
5070 7300 0.032130 AAGACGCTCGAGTTGCTGAA 59.968 50.000 15.13 0.00 0.00 3.02
5071 7301 0.664466 CAAGACGCTCGAGTTGCTGA 60.664 55.000 15.13 0.00 0.00 4.26
5077 7307 2.284684 CGTAGATACAAGACGCTCGAGT 59.715 50.000 15.13 0.00 0.00 4.18
5104 7334 1.845809 GCTGCGTGTTGGGAGTTCAG 61.846 60.000 0.00 0.00 0.00 3.02
5107 7337 1.893808 CTGCTGCGTGTTGGGAGTT 60.894 57.895 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.