Multiple sequence alignment - TraesCS2B01G073400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G073400 chr2B 100.000 5204 0 0 1 5204 39341968 39336765 0.000000e+00 9611.0
1 TraesCS2B01G073400 chr2B 82.725 2848 417 46 965 3775 49901592 49898783 0.000000e+00 2464.0
2 TraesCS2B01G073400 chr2B 84.034 2211 312 26 2007 4199 39184633 39186820 0.000000e+00 2089.0
3 TraesCS2B01G073400 chr2B 81.457 2114 350 26 2145 4229 38417220 38419320 0.000000e+00 1694.0
4 TraesCS2B01G073400 chr2B 81.075 2140 356 37 2146 4257 37677759 37679877 0.000000e+00 1663.0
5 TraesCS2B01G073400 chr2B 80.545 2128 387 21 2146 4257 38034384 38036500 0.000000e+00 1611.0
6 TraesCS2B01G073400 chr2B 79.940 1670 287 32 2588 4226 39087023 39088675 0.000000e+00 1184.0
7 TraesCS2B01G073400 chr2B 77.327 913 152 37 990 1866 38033631 38034524 6.060000e-134 488.0
8 TraesCS2B01G073400 chr2B 79.487 585 100 16 1285 1866 37677332 37677899 1.050000e-106 398.0
9 TraesCS2B01G073400 chr2B 83.614 415 62 2 1730 2144 49900681 49900273 8.170000e-103 385.0
10 TraesCS2B01G073400 chr2B 79.268 246 33 12 201 440 39183458 39183691 6.980000e-34 156.0
11 TraesCS2B01G073400 chr2B 90.265 113 10 1 333 445 49902691 49902580 4.200000e-31 147.0
12 TraesCS2B01G073400 chr2B 94.937 79 2 1 5126 5204 39340418 39340342 7.080000e-24 122.0
13 TraesCS2B01G073400 chr2A 93.553 3847 173 34 965 4758 24173168 24176992 0.000000e+00 5661.0
14 TraesCS2B01G073400 chr2A 81.410 2114 350 28 2146 4229 24411822 24409722 0.000000e+00 1687.0
15 TraesCS2B01G073400 chr2A 84.995 1013 141 9 2002 3008 24308666 24307659 0.000000e+00 1018.0
16 TraesCS2B01G073400 chr2A 77.981 1040 185 29 982 2010 24309387 24308381 3.440000e-171 612.0
17 TraesCS2B01G073400 chr2A 90.085 353 24 5 626 967 24172781 24173133 1.030000e-121 448.0
18 TraesCS2B01G073400 chr2A 87.071 379 34 8 4748 5123 24177142 24177508 1.040000e-111 414.0
19 TraesCS2B01G073400 chr2A 80.228 263 41 8 193 446 24172168 24172428 2.470000e-43 187.0
20 TraesCS2B01G073400 chr2A 94.937 79 2 1 5126 5204 24173759 24173835 7.080000e-24 122.0
21 TraesCS2B01G073400 chr2D 85.439 2287 302 21 2009 4283 30448888 30446621 0.000000e+00 2350.0
22 TraesCS2B01G073400 chr2D 85.566 2210 297 17 2007 4199 22510595 22508391 0.000000e+00 2294.0
23 TraesCS2B01G073400 chr2D 81.637 2102 348 27 2146 4226 22820228 22818144 0.000000e+00 1709.0
24 TraesCS2B01G073400 chr2D 89.176 1007 57 16 1 967 22439221 22440215 0.000000e+00 1208.0
25 TraesCS2B01G073400 chr2D 93.201 809 37 11 965 1767 22440251 22441047 0.000000e+00 1173.0
26 TraesCS2B01G073400 chr2D 78.725 1067 179 34 965 2006 30449658 30448615 0.000000e+00 669.0
27 TraesCS2B01G073400 chr2D 76.243 1368 239 45 666 2010 22511620 22510316 0.000000e+00 647.0
28 TraesCS2B01G073400 chr2D 87.885 454 41 7 4724 5176 22441141 22441581 5.970000e-144 521.0
29 TraesCS2B01G073400 chr2D 85.926 270 38 0 1875 2144 30448884 30448615 6.590000e-74 289.0
30 TraesCS2B01G073400 chr2D 84.118 170 21 4 276 445 30450801 30450638 5.390000e-35 159.0
31 TraesCS2B01G073400 chr2D 95.000 60 3 0 1 60 10056587 10056646 1.540000e-15 95.3
32 TraesCS2B01G073400 chr2D 95.000 60 3 0 1 60 586829139 586829198 1.540000e-15 95.3
33 TraesCS2B01G073400 chr2D 97.059 34 1 0 544 577 22511695 22511662 2.020000e-04 58.4
34 TraesCS2B01G073400 chr7B 80.996 1626 257 34 2679 4283 744138560 744140154 0.000000e+00 1243.0
35 TraesCS2B01G073400 chr7B 80.529 1058 163 26 964 2010 744137091 744138116 0.000000e+00 773.0
36 TraesCS2B01G073400 chr7B 87.278 676 84 2 2007 2681 744137837 744138511 0.000000e+00 771.0
37 TraesCS2B01G073400 chr6A 95.000 60 3 0 1 60 118181503 118181562 1.540000e-15 95.3
38 TraesCS2B01G073400 chr5A 95.000 60 3 0 1 60 1817095 1817036 1.540000e-15 95.3
39 TraesCS2B01G073400 chr3A 95.000 60 3 0 1 60 569539072 569539131 1.540000e-15 95.3
40 TraesCS2B01G073400 chr3A 95.000 60 3 0 1 60 733311658 733311717 1.540000e-15 95.3
41 TraesCS2B01G073400 chr1D 95.000 60 3 0 1 60 16467305 16467364 1.540000e-15 95.3
42 TraesCS2B01G073400 chrUn 93.333 60 4 0 1 60 70723004 70723063 7.180000e-14 89.8
43 TraesCS2B01G073400 chr5D 93.333 60 4 0 1 60 556580554 556580495 7.180000e-14 89.8
44 TraesCS2B01G073400 chr3D 81.690 71 13 0 4756 4826 362044231 362044301 5.630000e-05 60.2
45 TraesCS2B01G073400 chr1B 83.871 62 10 0 4767 4828 633055269 633055208 5.630000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G073400 chr2B 39336765 39341968 5203 True 4866.500000 9611 97.468500 1 5204 2 chr2B.!!$R1 5203
1 TraesCS2B01G073400 chr2B 38417220 38419320 2100 False 1694.000000 1694 81.457000 2145 4229 1 chr2B.!!$F1 2084
2 TraesCS2B01G073400 chr2B 39087023 39088675 1652 False 1184.000000 1184 79.940000 2588 4226 1 chr2B.!!$F2 1638
3 TraesCS2B01G073400 chr2B 39183458 39186820 3362 False 1122.500000 2089 81.651000 201 4199 2 chr2B.!!$F5 3998
4 TraesCS2B01G073400 chr2B 38033631 38036500 2869 False 1049.500000 1611 78.936000 990 4257 2 chr2B.!!$F4 3267
5 TraesCS2B01G073400 chr2B 37677332 37679877 2545 False 1030.500000 1663 80.281000 1285 4257 2 chr2B.!!$F3 2972
6 TraesCS2B01G073400 chr2B 49898783 49902691 3908 True 998.666667 2464 85.534667 333 3775 3 chr2B.!!$R2 3442
7 TraesCS2B01G073400 chr2A 24409722 24411822 2100 True 1687.000000 1687 81.410000 2146 4229 1 chr2A.!!$R1 2083
8 TraesCS2B01G073400 chr2A 24172168 24177508 5340 False 1366.400000 5661 89.174800 193 5204 5 chr2A.!!$F1 5011
9 TraesCS2B01G073400 chr2A 24307659 24309387 1728 True 815.000000 1018 81.488000 982 3008 2 chr2A.!!$R2 2026
10 TraesCS2B01G073400 chr2D 22818144 22820228 2084 True 1709.000000 1709 81.637000 2146 4226 1 chr2D.!!$R1 2080
11 TraesCS2B01G073400 chr2D 22508391 22511695 3304 True 999.800000 2294 86.289333 544 4199 3 chr2D.!!$R2 3655
12 TraesCS2B01G073400 chr2D 22439221 22441581 2360 False 967.333333 1208 90.087333 1 5176 3 chr2D.!!$F3 5175
13 TraesCS2B01G073400 chr2D 30446621 30450801 4180 True 866.750000 2350 83.552000 276 4283 4 chr2D.!!$R3 4007
14 TraesCS2B01G073400 chr7B 744137091 744140154 3063 False 929.000000 1243 82.934333 964 4283 3 chr7B.!!$F1 3319

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 931 0.037975 GAAGACGAACGGGCCACTAA 60.038 55.0 4.39 0.0 0.0 2.24 F
642 1242 0.254462 TCATGCGTATTTCTGCCCCA 59.746 50.0 0.00 0.0 0.0 4.96 F
1804 2589 0.314935 ATTTGCACTTCCACGCCTTG 59.685 50.0 0.00 0.0 0.0 3.61 F
1948 2733 0.314935 ATTTGCACTTCCACGGCTTG 59.685 50.0 0.00 0.0 0.0 4.01 F
1957 2742 0.320374 TCCACGGCTTGAGTACTTGG 59.680 55.0 0.00 0.0 0.0 3.61 F
1958 2743 0.320374 CCACGGCTTGAGTACTTGGA 59.680 55.0 0.00 0.0 0.0 3.53 F
2018 2803 0.537188 TCATCTTGGAACCTCCGAGC 59.463 55.0 5.20 0.0 45.8 5.03 F
3379 4791 0.385390 CAACCTTGAGTGGGCACAAC 59.615 55.0 0.00 0.0 0.0 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2000 2785 0.250234 TGCTCGGAGGTTCCAAGATG 59.750 55.000 7.20 0.0 35.91 2.90 R
2422 3765 0.461135 GGTACCCAGCCATGCATTTG 59.539 55.000 0.00 0.0 0.00 2.32 R
2806 4202 0.669318 ATGCTGCTGTTGCACAATGC 60.669 50.000 0.00 0.0 45.31 3.56 R
2967 4377 1.140052 TGTATTGCCCATAGGTCACCG 59.860 52.381 0.00 0.0 34.57 4.94 R
3222 4632 1.300697 GTCGCAGTTTGGGAGACGT 60.301 57.895 0.00 0.0 40.09 4.34 R
3257 4667 1.475280 TCCCCGATACACTCAGAAACG 59.525 52.381 0.00 0.0 0.00 3.60 R
3594 5039 2.006888 ACAAAGTCCGCACCATATTCG 58.993 47.619 0.00 0.0 0.00 3.34 R
4600 6077 1.466856 CCCAATCTTGCAGCTTAGCA 58.533 50.000 7.07 0.0 43.99 3.49 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 2.166870 GCAATTGCCCATCATGTTCTGA 59.833 45.455 20.06 0.00 34.81 3.27
75 80 3.577848 TGGTGCTTGGCATAGTTTGATTT 59.422 39.130 0.00 0.00 41.91 2.17
117 135 3.425162 AAGGTGAGCCTCTAACAAAGG 57.575 47.619 0.00 0.00 46.33 3.11
127 145 4.454847 GCCTCTAACAAAGGTACCTGAAAC 59.545 45.833 17.14 0.00 36.21 2.78
142 160 1.314730 GAAACGAAACCTTGAGGGCA 58.685 50.000 1.54 0.00 40.27 5.36
166 184 4.272504 ACTGGAAACGTGTATCAAACTGTG 59.727 41.667 0.00 0.00 0.00 3.66
172 190 4.394729 ACGTGTATCAAACTGTGGGATTT 58.605 39.130 0.00 0.00 0.00 2.17
177 195 6.863126 GTGTATCAAACTGTGGGATTTTCTTG 59.137 38.462 0.61 0.00 0.00 3.02
185 204 3.895041 TGTGGGATTTTCTTGAAGGGTTC 59.105 43.478 0.00 0.00 0.00 3.62
207 226 1.740025 CCCCGCTGAAAGTCTGAAATC 59.260 52.381 0.00 0.00 35.30 2.17
213 232 4.377841 CGCTGAAAGTCTGAAATCCAACTC 60.378 45.833 0.00 0.00 35.30 3.01
248 267 1.811679 GCTACTGGTTCTGCGCTCC 60.812 63.158 9.73 6.75 0.00 4.70
255 274 2.126463 TTCTGCGCTCCGAAGTCG 60.126 61.111 9.73 0.00 33.63 4.18
329 358 3.747579 CCCCCTCTTGGCCTGCAT 61.748 66.667 3.32 0.00 0.00 3.96
330 359 2.386100 CCCCCTCTTGGCCTGCATA 61.386 63.158 3.32 0.00 0.00 3.14
331 360 1.723128 CCCCCTCTTGGCCTGCATAT 61.723 60.000 3.32 0.00 0.00 1.78
346 375 5.757320 GCCTGCATATATATCTAGTGCAAGG 59.243 44.000 8.80 11.65 44.20 3.61
350 379 7.776107 TGCATATATATCTAGTGCAAGGTCTC 58.224 38.462 5.66 0.00 42.22 3.36
519 722 5.351458 GGAGGGTGATGCATTGAAATTAAC 58.649 41.667 0.00 0.00 0.00 2.01
521 724 6.357579 AGGGTGATGCATTGAAATTAACAA 57.642 33.333 0.00 1.49 0.00 2.83
594 930 1.180456 TGAAGACGAACGGGCCACTA 61.180 55.000 4.39 0.00 0.00 2.74
595 931 0.037975 GAAGACGAACGGGCCACTAA 60.038 55.000 4.39 0.00 0.00 2.24
596 932 0.611714 AAGACGAACGGGCCACTAAT 59.388 50.000 4.39 0.00 0.00 1.73
601 937 1.541379 GAACGGGCCACTAATTTGGT 58.459 50.000 4.39 0.00 39.09 3.67
608 944 4.083565 GGGCCACTAATTTGGTTACTTCA 58.916 43.478 4.39 0.00 39.09 3.02
615 952 6.586082 CACTAATTTGGTTACTTCATGGCAAC 59.414 38.462 0.00 0.00 0.00 4.17
629 966 1.070038 GGCAACACCAAAATCATGCG 58.930 50.000 0.00 0.00 38.86 4.73
642 1242 0.254462 TCATGCGTATTTCTGCCCCA 59.746 50.000 0.00 0.00 0.00 4.96
645 1245 0.906066 TGCGTATTTCTGCCCCACTA 59.094 50.000 0.00 0.00 0.00 2.74
662 1262 4.160329 CCACTAGGCCTCCATATCAAGTA 58.840 47.826 9.68 0.00 0.00 2.24
664 1264 3.827302 ACTAGGCCTCCATATCAAGTACG 59.173 47.826 9.68 0.00 0.00 3.67
673 1273 3.069586 CCATATCAAGTACGGGAGCTTCA 59.930 47.826 0.00 0.00 0.00 3.02
680 1280 2.089980 GTACGGGAGCTTCAGTAGTCA 58.910 52.381 5.11 0.00 0.00 3.41
731 1333 9.965902 AATCAATATGTTATCTACCCCAAGATC 57.034 33.333 0.00 0.00 37.41 2.75
750 1353 3.414700 GTGCTTGGCGGTCAGTCG 61.415 66.667 0.00 0.00 0.00 4.18
811 1429 5.766150 TCTCCAAAATGTTCGTCAACAAT 57.234 34.783 0.00 0.00 45.78 2.71
822 1448 5.049060 TGTTCGTCAACAATTCCACTAATGG 60.049 40.000 0.00 0.00 42.63 3.16
825 1451 8.905956 GTTCGTCAACAATTCCACTAATGGTCT 61.906 40.741 0.00 0.00 38.61 3.85
832 1458 2.225068 CCACTAATGGTCTCGCGAAT 57.775 50.000 11.33 0.00 41.64 3.34
980 1660 3.058639 GCAGAGGAATTCACGGCATAATC 60.059 47.826 16.84 0.00 0.00 1.75
1004 1684 4.719273 TGAAACCCTTTTCTTCCAAATGGT 59.281 37.500 0.00 0.00 41.64 3.55
1046 1726 0.764890 TTGTTCCTGGTCCTCTGTGG 59.235 55.000 0.00 0.00 37.10 4.17
1182 1874 2.427320 GGTGGTGACTGCTGCTCA 59.573 61.111 0.00 0.00 0.00 4.26
1197 1889 3.217626 CTGCTCATGGGAAAGGATAACC 58.782 50.000 0.00 0.00 0.00 2.85
1219 1911 1.065358 CGACAATACCACACACCGAC 58.935 55.000 0.00 0.00 0.00 4.79
1268 1960 7.752638 ACCTACCAAGAAAACCTACAGTATTT 58.247 34.615 0.00 0.00 0.00 1.40
1628 2377 4.583907 GGGACTCTTCATAGTACAGGTACC 59.416 50.000 2.73 2.73 36.75 3.34
1716 2501 4.083324 CGTGTACAAATGGCAGATTTCAGT 60.083 41.667 0.00 0.00 0.00 3.41
1752 2537 2.159198 GCGTGAATTGCATTTGGGATCT 60.159 45.455 0.00 0.00 0.00 2.75
1759 2544 6.608405 TGAATTGCATTTGGGATCTAGTCAAT 59.392 34.615 0.00 0.00 0.00 2.57
1760 2545 7.124599 TGAATTGCATTTGGGATCTAGTCAATT 59.875 33.333 0.00 0.00 35.24 2.32
1761 2546 5.840243 TGCATTTGGGATCTAGTCAATTG 57.160 39.130 0.00 0.00 0.00 2.32
1762 2547 5.508567 TGCATTTGGGATCTAGTCAATTGA 58.491 37.500 3.38 3.38 0.00 2.57
1763 2548 5.951148 TGCATTTGGGATCTAGTCAATTGAA 59.049 36.000 10.35 0.00 0.00 2.69
1764 2549 6.095860 TGCATTTGGGATCTAGTCAATTGAAG 59.904 38.462 10.35 5.21 0.00 3.02
1765 2550 6.460676 GCATTTGGGATCTAGTCAATTGAAGG 60.461 42.308 10.35 3.61 0.00 3.46
1766 2551 4.778213 TGGGATCTAGTCAATTGAAGGG 57.222 45.455 10.35 3.25 0.00 3.95
1767 2552 4.111577 TGGGATCTAGTCAATTGAAGGGT 58.888 43.478 10.35 0.00 0.00 4.34
1768 2553 5.285401 TGGGATCTAGTCAATTGAAGGGTA 58.715 41.667 10.35 0.00 0.00 3.69
1769 2554 5.366768 TGGGATCTAGTCAATTGAAGGGTAG 59.633 44.000 10.35 8.98 0.00 3.18
1770 2555 5.301555 GGATCTAGTCAATTGAAGGGTAGC 58.698 45.833 10.35 0.00 0.00 3.58
1771 2556 4.755266 TCTAGTCAATTGAAGGGTAGCC 57.245 45.455 10.35 1.60 0.00 3.93
1772 2557 4.362677 TCTAGTCAATTGAAGGGTAGCCT 58.637 43.478 10.35 7.93 0.00 4.58
1773 2558 3.636153 AGTCAATTGAAGGGTAGCCTC 57.364 47.619 15.24 8.59 0.00 4.70
1774 2559 2.239907 AGTCAATTGAAGGGTAGCCTCC 59.760 50.000 15.24 0.71 0.00 4.30
1781 2566 2.832498 GGGTAGCCTCCCAGCATC 59.168 66.667 2.95 0.00 46.30 3.91
1782 2567 2.823758 GGGTAGCCTCCCAGCATCC 61.824 68.421 2.95 0.00 46.30 3.51
1783 2568 2.072487 GGTAGCCTCCCAGCATCCA 61.072 63.158 0.00 0.00 34.23 3.41
1784 2569 1.422161 GGTAGCCTCCCAGCATCCAT 61.422 60.000 0.00 0.00 34.23 3.41
1785 2570 1.352083 GTAGCCTCCCAGCATCCATA 58.648 55.000 0.00 0.00 34.23 2.74
1786 2571 1.912043 GTAGCCTCCCAGCATCCATAT 59.088 52.381 0.00 0.00 34.23 1.78
1787 2572 1.453633 AGCCTCCCAGCATCCATATT 58.546 50.000 0.00 0.00 34.23 1.28
1788 2573 1.785208 AGCCTCCCAGCATCCATATTT 59.215 47.619 0.00 0.00 34.23 1.40
1789 2574 1.891150 GCCTCCCAGCATCCATATTTG 59.109 52.381 0.00 0.00 0.00 2.32
1790 2575 1.891150 CCTCCCAGCATCCATATTTGC 59.109 52.381 0.00 0.00 39.17 3.68
1791 2576 2.589720 CTCCCAGCATCCATATTTGCA 58.410 47.619 5.20 0.00 41.35 4.08
1792 2577 2.295349 CTCCCAGCATCCATATTTGCAC 59.705 50.000 0.00 0.00 41.35 4.57
1793 2578 2.091720 TCCCAGCATCCATATTTGCACT 60.092 45.455 0.00 0.00 41.35 4.40
1794 2579 2.696707 CCCAGCATCCATATTTGCACTT 59.303 45.455 0.00 0.00 41.35 3.16
1795 2580 3.243636 CCCAGCATCCATATTTGCACTTC 60.244 47.826 0.00 0.00 41.35 3.01
1796 2581 3.243636 CCAGCATCCATATTTGCACTTCC 60.244 47.826 0.00 0.00 41.35 3.46
1797 2582 3.382227 CAGCATCCATATTTGCACTTCCA 59.618 43.478 0.00 0.00 41.35 3.53
1798 2583 3.382546 AGCATCCATATTTGCACTTCCAC 59.617 43.478 0.00 0.00 41.35 4.02
1799 2584 3.793129 GCATCCATATTTGCACTTCCACG 60.793 47.826 0.00 0.00 38.72 4.94
1800 2585 1.742831 TCCATATTTGCACTTCCACGC 59.257 47.619 0.00 0.00 0.00 5.34
1801 2586 1.202290 CCATATTTGCACTTCCACGCC 60.202 52.381 0.00 0.00 0.00 5.68
1802 2587 1.745087 CATATTTGCACTTCCACGCCT 59.255 47.619 0.00 0.00 0.00 5.52
1803 2588 1.904287 TATTTGCACTTCCACGCCTT 58.096 45.000 0.00 0.00 0.00 4.35
1804 2589 0.314935 ATTTGCACTTCCACGCCTTG 59.685 50.000 0.00 0.00 0.00 3.61
1805 2590 0.749818 TTTGCACTTCCACGCCTTGA 60.750 50.000 0.00 0.00 0.00 3.02
1806 2591 1.165907 TTGCACTTCCACGCCTTGAG 61.166 55.000 0.00 0.00 0.00 3.02
1807 2592 1.598130 GCACTTCCACGCCTTGAGT 60.598 57.895 0.00 0.00 0.00 3.41
1808 2593 0.320421 GCACTTCCACGCCTTGAGTA 60.320 55.000 0.00 0.00 0.00 2.59
1809 2594 1.429463 CACTTCCACGCCTTGAGTAC 58.571 55.000 0.00 0.00 0.00 2.73
1810 2595 0.320697 ACTTCCACGCCTTGAGTACC 59.679 55.000 0.00 0.00 0.00 3.34
1811 2596 0.608640 CTTCCACGCCTTGAGTACCT 59.391 55.000 0.00 0.00 0.00 3.08
1812 2597 0.320374 TTCCACGCCTTGAGTACCTG 59.680 55.000 0.00 0.00 0.00 4.00
1813 2598 1.079127 CCACGCCTTGAGTACCTGG 60.079 63.158 0.00 0.00 0.00 4.45
1814 2599 1.541310 CCACGCCTTGAGTACCTGGA 61.541 60.000 0.00 0.00 0.00 3.86
1815 2600 0.537188 CACGCCTTGAGTACCTGGAT 59.463 55.000 0.00 0.00 0.00 3.41
1816 2601 0.824759 ACGCCTTGAGTACCTGGATC 59.175 55.000 0.00 0.00 0.00 3.36
1817 2602 1.115467 CGCCTTGAGTACCTGGATCT 58.885 55.000 0.00 0.00 0.00 2.75
1818 2603 1.482593 CGCCTTGAGTACCTGGATCTT 59.517 52.381 0.00 0.00 0.00 2.40
1819 2604 2.093447 CGCCTTGAGTACCTGGATCTTT 60.093 50.000 0.00 0.00 0.00 2.52
1820 2605 3.536570 GCCTTGAGTACCTGGATCTTTC 58.463 50.000 0.00 0.00 0.00 2.62
1821 2606 3.055094 GCCTTGAGTACCTGGATCTTTCA 60.055 47.826 0.00 0.00 0.00 2.69
1822 2607 4.384647 GCCTTGAGTACCTGGATCTTTCAT 60.385 45.833 0.00 0.00 0.00 2.57
1823 2608 5.163301 GCCTTGAGTACCTGGATCTTTCATA 60.163 44.000 0.00 0.00 0.00 2.15
1824 2609 6.284459 CCTTGAGTACCTGGATCTTTCATAC 58.716 44.000 0.00 0.00 0.00 2.39
1825 2610 6.127054 CCTTGAGTACCTGGATCTTTCATACA 60.127 42.308 0.00 0.00 0.00 2.29
1826 2611 6.867519 TGAGTACCTGGATCTTTCATACAA 57.132 37.500 0.00 0.00 0.00 2.41
1827 2612 6.640518 TGAGTACCTGGATCTTTCATACAAC 58.359 40.000 0.00 0.00 0.00 3.32
1828 2613 5.990668 AGTACCTGGATCTTTCATACAACC 58.009 41.667 0.00 0.00 0.00 3.77
1829 2614 5.726793 AGTACCTGGATCTTTCATACAACCT 59.273 40.000 0.00 0.00 0.00 3.50
1830 2615 5.104259 ACCTGGATCTTTCATACAACCTC 57.896 43.478 0.00 0.00 0.00 3.85
1831 2616 4.785376 ACCTGGATCTTTCATACAACCTCT 59.215 41.667 0.00 0.00 0.00 3.69
1832 2617 5.251700 ACCTGGATCTTTCATACAACCTCTT 59.748 40.000 0.00 0.00 0.00 2.85
1833 2618 5.819901 CCTGGATCTTTCATACAACCTCTTC 59.180 44.000 0.00 0.00 0.00 2.87
1834 2619 5.419542 TGGATCTTTCATACAACCTCTTCG 58.580 41.667 0.00 0.00 0.00 3.79
1835 2620 5.186992 TGGATCTTTCATACAACCTCTTCGA 59.813 40.000 0.00 0.00 0.00 3.71
1836 2621 6.106673 GGATCTTTCATACAACCTCTTCGAA 58.893 40.000 0.00 0.00 0.00 3.71
1837 2622 6.256757 GGATCTTTCATACAACCTCTTCGAAG 59.743 42.308 19.35 19.35 0.00 3.79
1838 2623 5.479306 TCTTTCATACAACCTCTTCGAAGG 58.521 41.667 24.37 13.42 42.55 3.46
1839 2624 5.245301 TCTTTCATACAACCTCTTCGAAGGA 59.755 40.000 24.37 10.67 38.87 3.36
1840 2625 4.451629 TCATACAACCTCTTCGAAGGAC 57.548 45.455 24.37 0.00 38.87 3.85
1841 2626 3.830178 TCATACAACCTCTTCGAAGGACA 59.170 43.478 24.37 5.10 38.87 4.02
1842 2627 4.466370 TCATACAACCTCTTCGAAGGACAT 59.534 41.667 24.37 6.94 38.87 3.06
1843 2628 5.655090 TCATACAACCTCTTCGAAGGACATA 59.345 40.000 24.37 10.45 38.87 2.29
1844 2629 6.323996 TCATACAACCTCTTCGAAGGACATAT 59.676 38.462 24.37 12.05 38.87 1.78
1845 2630 7.504574 TCATACAACCTCTTCGAAGGACATATA 59.495 37.037 24.37 11.40 38.87 0.86
1846 2631 5.903810 ACAACCTCTTCGAAGGACATATAC 58.096 41.667 24.37 0.00 38.87 1.47
1847 2632 5.163437 ACAACCTCTTCGAAGGACATATACC 60.163 44.000 24.37 0.00 38.87 2.73
1848 2633 4.805744 ACCTCTTCGAAGGACATATACCT 58.194 43.478 24.37 0.00 38.87 3.08
1849 2634 5.950023 ACCTCTTCGAAGGACATATACCTA 58.050 41.667 24.37 0.10 38.87 3.08
1850 2635 6.553857 ACCTCTTCGAAGGACATATACCTAT 58.446 40.000 24.37 0.00 38.87 2.57
1851 2636 7.696981 ACCTCTTCGAAGGACATATACCTATA 58.303 38.462 24.37 0.00 38.87 1.31
1852 2637 8.168725 ACCTCTTCGAAGGACATATACCTATAA 58.831 37.037 24.37 0.00 38.87 0.98
1853 2638 9.021807 CCTCTTCGAAGGACATATACCTATAAA 57.978 37.037 24.37 0.00 38.87 1.40
1854 2639 9.843334 CTCTTCGAAGGACATATACCTATAAAC 57.157 37.037 24.37 0.00 36.67 2.01
1855 2640 9.584008 TCTTCGAAGGACATATACCTATAAACT 57.416 33.333 24.37 0.00 36.67 2.66
1870 2655 6.985059 ACCTATAAACTTATCTCGGAACTTGC 59.015 38.462 0.00 0.00 0.00 4.01
1871 2656 5.968387 ATAAACTTATCTCGGAACTTGCG 57.032 39.130 0.00 0.00 0.00 4.85
1872 2657 3.587797 AACTTATCTCGGAACTTGCGA 57.412 42.857 5.21 5.21 38.05 5.10
1873 2658 3.802948 ACTTATCTCGGAACTTGCGAT 57.197 42.857 5.80 0.00 40.01 4.58
1874 2659 4.124851 ACTTATCTCGGAACTTGCGATT 57.875 40.909 5.80 0.35 40.01 3.34
1875 2660 3.865745 ACTTATCTCGGAACTTGCGATTG 59.134 43.478 5.80 0.00 40.01 2.67
1876 2661 1.009829 ATCTCGGAACTTGCGATTGC 58.990 50.000 5.80 0.00 40.01 3.56
1878 2663 1.351430 CTCGGAACTTGCGATTGCGA 61.351 55.000 5.80 9.86 45.85 5.10
1890 2675 4.918755 GCGATTGCGAGAATTGTATTTG 57.081 40.909 0.00 0.00 40.82 2.32
1891 2676 4.587306 GCGATTGCGAGAATTGTATTTGA 58.413 39.130 0.00 0.00 40.82 2.69
1892 2677 4.434588 GCGATTGCGAGAATTGTATTTGAC 59.565 41.667 0.00 0.00 40.82 3.18
1893 2678 5.727791 GCGATTGCGAGAATTGTATTTGACT 60.728 40.000 0.00 0.00 40.82 3.41
1894 2679 6.250819 CGATTGCGAGAATTGTATTTGACTT 58.749 36.000 0.00 0.00 40.82 3.01
1895 2680 6.742718 CGATTGCGAGAATTGTATTTGACTTT 59.257 34.615 0.00 0.00 40.82 2.66
1896 2681 7.045354 CGATTGCGAGAATTGTATTTGACTTTC 60.045 37.037 0.00 0.00 40.82 2.62
1897 2682 6.552859 TGCGAGAATTGTATTTGACTTTCA 57.447 33.333 0.00 0.00 0.00 2.69
1898 2683 6.964908 TGCGAGAATTGTATTTGACTTTCAA 58.035 32.000 0.00 0.00 34.03 2.69
1899 2684 7.592938 TGCGAGAATTGTATTTGACTTTCAAT 58.407 30.769 0.00 0.00 36.11 2.57
1900 2685 8.726068 TGCGAGAATTGTATTTGACTTTCAATA 58.274 29.630 0.00 0.00 36.11 1.90
1901 2686 9.214953 GCGAGAATTGTATTTGACTTTCAATAG 57.785 33.333 0.00 0.00 36.11 1.73
1910 2695 9.994432 GTATTTGACTTTCAATAGATTGAGTGG 57.006 33.333 5.18 3.36 46.34 4.00
1911 2696 8.868522 ATTTGACTTTCAATAGATTGAGTGGA 57.131 30.769 5.18 0.00 46.34 4.02
1912 2697 7.912056 TTGACTTTCAATAGATTGAGTGGAG 57.088 36.000 5.18 5.62 46.34 3.86
1913 2698 6.409704 TGACTTTCAATAGATTGAGTGGAGG 58.590 40.000 5.18 0.00 46.34 4.30
1914 2699 5.189180 ACTTTCAATAGATTGAGTGGAGGC 58.811 41.667 5.18 0.00 46.34 4.70
1915 2700 3.845781 TCAATAGATTGAGTGGAGGCC 57.154 47.619 0.00 0.00 41.51 5.19
1916 2701 3.387962 TCAATAGATTGAGTGGAGGCCT 58.612 45.455 3.86 3.86 41.51 5.19
1917 2702 3.389329 TCAATAGATTGAGTGGAGGCCTC 59.611 47.826 25.59 25.59 41.51 4.70
1918 2703 3.495806 CAATAGATTGAGTGGAGGCCTCC 60.496 52.174 40.56 40.56 43.85 4.30
1919 2704 6.562653 CAATAGATTGAGTGGAGGCCTCCC 62.563 54.167 42.54 33.21 43.38 4.30
1926 2711 2.597903 GGAGGCCTCCCAACATCC 59.402 66.667 38.25 14.27 43.94 3.51
1927 2712 2.003548 GGAGGCCTCCCAACATCCT 61.004 63.158 38.25 0.00 43.94 3.24
1928 2713 1.575447 GGAGGCCTCCCAACATCCTT 61.575 60.000 38.25 0.00 43.94 3.36
1929 2714 1.213296 GAGGCCTCCCAACATCCTTA 58.787 55.000 23.19 0.00 0.00 2.69
1930 2715 1.777272 GAGGCCTCCCAACATCCTTAT 59.223 52.381 23.19 0.00 0.00 1.73
1931 2716 2.175715 GAGGCCTCCCAACATCCTTATT 59.824 50.000 23.19 0.00 0.00 1.40
1932 2717 2.587307 AGGCCTCCCAACATCCTTATTT 59.413 45.455 0.00 0.00 0.00 1.40
1933 2718 2.695147 GGCCTCCCAACATCCTTATTTG 59.305 50.000 0.00 0.00 0.00 2.32
1934 2719 2.101415 GCCTCCCAACATCCTTATTTGC 59.899 50.000 0.00 0.00 0.00 3.68
1935 2720 3.364549 CCTCCCAACATCCTTATTTGCA 58.635 45.455 0.00 0.00 0.00 4.08
1936 2721 3.131046 CCTCCCAACATCCTTATTTGCAC 59.869 47.826 0.00 0.00 0.00 4.57
1937 2722 4.019174 CTCCCAACATCCTTATTTGCACT 58.981 43.478 0.00 0.00 0.00 4.40
1938 2723 4.415596 TCCCAACATCCTTATTTGCACTT 58.584 39.130 0.00 0.00 0.00 3.16
1939 2724 4.462483 TCCCAACATCCTTATTTGCACTTC 59.538 41.667 0.00 0.00 0.00 3.01
1940 2725 4.381932 CCCAACATCCTTATTTGCACTTCC 60.382 45.833 0.00 0.00 0.00 3.46
1941 2726 4.220382 CCAACATCCTTATTTGCACTTCCA 59.780 41.667 0.00 0.00 0.00 3.53
1942 2727 5.163513 CAACATCCTTATTTGCACTTCCAC 58.836 41.667 0.00 0.00 0.00 4.02
1943 2728 3.440173 ACATCCTTATTTGCACTTCCACG 59.560 43.478 0.00 0.00 0.00 4.94
1944 2729 2.432444 TCCTTATTTGCACTTCCACGG 58.568 47.619 0.00 0.00 0.00 4.94
1945 2730 1.135402 CCTTATTTGCACTTCCACGGC 60.135 52.381 0.00 0.00 0.00 5.68
1946 2731 1.812571 CTTATTTGCACTTCCACGGCT 59.187 47.619 0.00 0.00 0.00 5.52
1947 2732 1.904287 TATTTGCACTTCCACGGCTT 58.096 45.000 0.00 0.00 0.00 4.35
1948 2733 0.314935 ATTTGCACTTCCACGGCTTG 59.685 50.000 0.00 0.00 0.00 4.01
1949 2734 0.749818 TTTGCACTTCCACGGCTTGA 60.750 50.000 0.00 0.00 0.00 3.02
1950 2735 1.165907 TTGCACTTCCACGGCTTGAG 61.166 55.000 0.00 0.00 0.00 3.02
1951 2736 1.598130 GCACTTCCACGGCTTGAGT 60.598 57.895 0.00 0.00 0.00 3.41
1952 2737 0.320421 GCACTTCCACGGCTTGAGTA 60.320 55.000 0.00 0.00 0.00 2.59
1953 2738 1.429463 CACTTCCACGGCTTGAGTAC 58.571 55.000 0.00 0.00 0.00 2.73
1954 2739 1.000955 CACTTCCACGGCTTGAGTACT 59.999 52.381 0.00 0.00 0.00 2.73
1955 2740 1.692519 ACTTCCACGGCTTGAGTACTT 59.307 47.619 0.00 0.00 0.00 2.24
1956 2741 2.069273 CTTCCACGGCTTGAGTACTTG 58.931 52.381 0.00 0.00 0.00 3.16
1957 2742 0.320374 TCCACGGCTTGAGTACTTGG 59.680 55.000 0.00 0.00 0.00 3.61
1958 2743 0.320374 CCACGGCTTGAGTACTTGGA 59.680 55.000 0.00 0.00 0.00 3.53
1959 2744 1.066143 CCACGGCTTGAGTACTTGGAT 60.066 52.381 0.00 0.00 0.00 3.41
1960 2745 2.271800 CACGGCTTGAGTACTTGGATC 58.728 52.381 0.00 0.00 0.00 3.36
1961 2746 2.093973 CACGGCTTGAGTACTTGGATCT 60.094 50.000 0.00 0.00 0.00 2.75
1962 2747 2.567615 ACGGCTTGAGTACTTGGATCTT 59.432 45.455 0.00 0.00 0.00 2.40
1963 2748 3.008049 ACGGCTTGAGTACTTGGATCTTT 59.992 43.478 0.00 0.00 0.00 2.52
1964 2749 3.619038 CGGCTTGAGTACTTGGATCTTTC 59.381 47.826 0.00 0.00 0.00 2.62
1965 2750 4.579869 GGCTTGAGTACTTGGATCTTTCA 58.420 43.478 0.00 0.00 0.00 2.69
1966 2751 4.633565 GGCTTGAGTACTTGGATCTTTCAG 59.366 45.833 0.00 0.00 0.00 3.02
1967 2752 5.482908 GCTTGAGTACTTGGATCTTTCAGA 58.517 41.667 0.00 0.00 0.00 3.27
1968 2753 5.350091 GCTTGAGTACTTGGATCTTTCAGAC 59.650 44.000 0.00 0.00 0.00 3.51
1969 2754 6.419484 TTGAGTACTTGGATCTTTCAGACA 57.581 37.500 0.00 0.00 0.00 3.41
1970 2755 6.419484 TGAGTACTTGGATCTTTCAGACAA 57.581 37.500 0.00 0.00 0.00 3.18
1971 2756 6.223852 TGAGTACTTGGATCTTTCAGACAAC 58.776 40.000 0.00 0.00 0.00 3.32
1972 2757 5.552178 AGTACTTGGATCTTTCAGACAACC 58.448 41.667 0.00 0.00 0.00 3.77
1973 2758 4.713792 ACTTGGATCTTTCAGACAACCT 57.286 40.909 0.00 0.00 0.00 3.50
1974 2759 5.825593 ACTTGGATCTTTCAGACAACCTA 57.174 39.130 0.00 0.00 0.00 3.08
1975 2760 6.380079 ACTTGGATCTTTCAGACAACCTAT 57.620 37.500 0.00 0.00 0.00 2.57
1976 2761 6.784031 ACTTGGATCTTTCAGACAACCTATT 58.216 36.000 0.00 0.00 0.00 1.73
1977 2762 7.234355 ACTTGGATCTTTCAGACAACCTATTT 58.766 34.615 0.00 0.00 0.00 1.40
1978 2763 7.391833 ACTTGGATCTTTCAGACAACCTATTTC 59.608 37.037 0.00 0.00 0.00 2.17
1979 2764 6.778821 TGGATCTTTCAGACAACCTATTTCA 58.221 36.000 0.00 0.00 0.00 2.69
1980 2765 7.230747 TGGATCTTTCAGACAACCTATTTCAA 58.769 34.615 0.00 0.00 0.00 2.69
1981 2766 7.391554 TGGATCTTTCAGACAACCTATTTCAAG 59.608 37.037 0.00 0.00 0.00 3.02
1982 2767 7.148171 GGATCTTTCAGACAACCTATTTCAAGG 60.148 40.741 0.00 0.00 42.82 3.61
1983 2768 6.837312 TCTTTCAGACAACCTATTTCAAGGA 58.163 36.000 0.00 0.00 39.15 3.36
1984 2769 6.710744 TCTTTCAGACAACCTATTTCAAGGAC 59.289 38.462 0.00 0.00 39.15 3.85
1985 2770 5.560722 TCAGACAACCTATTTCAAGGACA 57.439 39.130 0.00 0.00 39.15 4.02
1986 2771 6.126863 TCAGACAACCTATTTCAAGGACAT 57.873 37.500 0.00 0.00 39.15 3.06
1987 2772 7.252612 TCAGACAACCTATTTCAAGGACATA 57.747 36.000 0.00 0.00 39.15 2.29
1988 2773 7.861629 TCAGACAACCTATTTCAAGGACATAT 58.138 34.615 0.00 0.00 39.15 1.78
1989 2774 8.328758 TCAGACAACCTATTTCAAGGACATATT 58.671 33.333 0.00 0.00 39.15 1.28
1990 2775 8.616076 CAGACAACCTATTTCAAGGACATATTC 58.384 37.037 0.00 0.00 39.15 1.75
1991 2776 8.552296 AGACAACCTATTTCAAGGACATATTCT 58.448 33.333 0.00 0.00 39.15 2.40
1992 2777 9.178758 GACAACCTATTTCAAGGACATATTCTT 57.821 33.333 0.00 0.00 39.15 2.52
2001 2786 9.567776 TTTCAAGGACATATTCTTACAAACTCA 57.432 29.630 0.00 0.00 0.00 3.41
2002 2787 9.739276 TTCAAGGACATATTCTTACAAACTCAT 57.261 29.630 0.00 0.00 0.00 2.90
2003 2788 9.383519 TCAAGGACATATTCTTACAAACTCATC 57.616 33.333 0.00 0.00 0.00 2.92
2004 2789 9.388506 CAAGGACATATTCTTACAAACTCATCT 57.611 33.333 0.00 0.00 0.00 2.90
2005 2790 9.965902 AAGGACATATTCTTACAAACTCATCTT 57.034 29.630 0.00 0.00 0.00 2.40
2013 2798 6.231211 TCTTACAAACTCATCTTGGAACCTC 58.769 40.000 0.00 0.00 0.00 3.85
2018 2803 0.537188 TCATCTTGGAACCTCCGAGC 59.463 55.000 5.20 0.00 45.80 5.03
2116 3039 8.383175 ACTTGGATCTTTCATACAACCTCTTTA 58.617 33.333 0.00 0.00 0.00 1.85
2118 3041 8.792830 TGGATCTTTCATACAACCTCTTTAAG 57.207 34.615 0.00 0.00 0.00 1.85
2198 3403 0.546747 TTGAGTGGTAGGGTCCCAGG 60.547 60.000 11.55 0.00 31.13 4.45
2307 3650 4.621991 AGTGTACATCATCGCTTCATACC 58.378 43.478 0.00 0.00 0.00 2.73
2422 3765 4.510038 ACTGATTTGGTCATTCAAGTGC 57.490 40.909 0.00 0.00 35.97 4.40
2757 4153 3.430453 TGGTTTCATGTTTCCCCATCTC 58.570 45.455 0.00 0.00 0.00 2.75
2781 4177 1.153353 TTCTCGATGTTTCCCGCAAC 58.847 50.000 0.00 0.00 0.00 4.17
2872 4277 7.745620 AACAGATTTACAGGAAAAGTACCAG 57.254 36.000 0.00 0.00 0.00 4.00
2967 4377 1.621317 GATGGGGCTAGTAGCTTCTCC 59.379 57.143 21.20 13.46 41.99 3.71
3239 4649 1.006571 GACGTCTCCCAAACTGCGA 60.007 57.895 8.70 0.00 0.00 5.10
3257 4667 3.317149 TGCGACACTATGGTATACCTCAC 59.683 47.826 22.41 5.68 36.82 3.51
3327 4739 5.856126 TTTTCAACAGCTCCTACATTACG 57.144 39.130 0.00 0.00 0.00 3.18
3379 4791 0.385390 CAACCTTGAGTGGGCACAAC 59.615 55.000 0.00 0.00 0.00 3.32
3478 4890 6.811665 TCTCCAACACTTGAGTATAATTGACG 59.188 38.462 0.00 0.00 0.00 4.35
3551 4978 5.092968 TCCATTTGAACCCATTGATCCTTT 58.907 37.500 0.00 0.00 0.00 3.11
3556 4989 4.402829 TGAACCCATTGATCCTTTCGAAA 58.597 39.130 10.71 10.71 0.00 3.46
3826 5274 1.749258 GGACCGATTCCTGCAACCC 60.749 63.158 0.00 0.00 41.95 4.11
3861 5309 3.367607 CGAGATCGAAAGCTTAGACCTG 58.632 50.000 0.00 0.00 43.02 4.00
3882 5330 1.969923 TCCAAAAACAGGCTGAATGGG 59.030 47.619 23.66 15.00 0.00 4.00
4026 5475 1.810755 GGGAACAACAACCTTCGATCC 59.189 52.381 0.00 0.00 0.00 3.36
4046 5495 0.836606 TGCACTTCCAGTTCAGGTCA 59.163 50.000 0.00 0.00 0.00 4.02
4151 5600 2.877043 GCATTTTGGGCCACTATCAG 57.123 50.000 5.23 0.00 0.00 2.90
4199 5648 3.664276 CGGCGTGTTATTCTCAAACTGTG 60.664 47.826 0.00 0.00 0.00 3.66
4236 5695 3.386402 AGAGAGGGCTAGTGATTAACAGC 59.614 47.826 0.00 0.00 34.25 4.40
4238 5697 0.938008 GGGCTAGTGATTAACAGCGC 59.062 55.000 0.00 0.00 38.06 5.92
4270 5729 6.530019 AAACAACACAAGGAGATCACTTTT 57.470 33.333 0.00 0.00 0.00 2.27
4283 5742 7.025963 GGAGATCACTTTTGTAATCTGCTTTG 58.974 38.462 0.00 0.00 34.76 2.77
4284 5743 7.308830 GGAGATCACTTTTGTAATCTGCTTTGT 60.309 37.037 0.00 0.00 34.76 2.83
4285 5744 7.588512 AGATCACTTTTGTAATCTGCTTTGTC 58.411 34.615 0.00 0.00 0.00 3.18
4287 5746 7.094508 TCACTTTTGTAATCTGCTTTGTCAA 57.905 32.000 0.00 0.00 0.00 3.18
4288 5747 7.195646 TCACTTTTGTAATCTGCTTTGTCAAG 58.804 34.615 0.00 0.00 0.00 3.02
4289 5748 6.974622 CACTTTTGTAATCTGCTTTGTCAAGT 59.025 34.615 0.00 0.00 31.86 3.16
4290 5749 8.128582 CACTTTTGTAATCTGCTTTGTCAAGTA 58.871 33.333 0.00 0.00 31.86 2.24
4291 5750 8.682710 ACTTTTGTAATCTGCTTTGTCAAGTAA 58.317 29.630 0.00 0.00 31.86 2.24
4292 5751 9.173939 CTTTTGTAATCTGCTTTGTCAAGTAAG 57.826 33.333 0.00 0.00 31.86 2.34
4293 5752 8.445275 TTTGTAATCTGCTTTGTCAAGTAAGA 57.555 30.769 0.00 0.00 32.57 2.10
4294 5753 8.445275 TTGTAATCTGCTTTGTCAAGTAAGAA 57.555 30.769 0.00 0.00 32.09 2.52
4295 5754 8.621532 TGTAATCTGCTTTGTCAAGTAAGAAT 57.378 30.769 0.00 0.00 32.09 2.40
4296 5755 8.721478 TGTAATCTGCTTTGTCAAGTAAGAATC 58.279 33.333 0.00 0.00 32.09 2.52
4298 5757 6.545504 TCTGCTTTGTCAAGTAAGAATCAC 57.454 37.500 0.00 0.00 31.86 3.06
4300 5759 6.203530 TCTGCTTTGTCAAGTAAGAATCACTG 59.796 38.462 0.00 0.00 31.86 3.66
4301 5760 5.822519 TGCTTTGTCAAGTAAGAATCACTGT 59.177 36.000 0.00 0.00 31.86 3.55
4302 5761 6.989759 TGCTTTGTCAAGTAAGAATCACTGTA 59.010 34.615 0.00 0.00 31.86 2.74
4304 5763 8.012241 GCTTTGTCAAGTAAGAATCACTGTAAG 58.988 37.037 0.00 0.00 33.93 2.34
4306 5765 9.607988 TTTGTCAAGTAAGAATCACTGTAAGAA 57.392 29.630 0.00 0.00 37.43 2.52
4346 5822 7.173863 TGTCAAACTTTGTCGAGTAAGAATC 57.826 36.000 12.12 0.00 0.00 2.52
4348 5824 7.279090 TGTCAAACTTTGTCGAGTAAGAATCAA 59.721 33.333 12.12 0.00 0.00 2.57
4378 5854 1.598701 GAACCCTGAATGGTGGCTGC 61.599 60.000 0.00 0.00 39.05 5.25
4382 5858 0.458669 CCTGAATGGTGGCTGCAATC 59.541 55.000 0.50 0.00 0.00 2.67
4395 5871 0.703488 TGCAATCATCAGGGGTTGGA 59.297 50.000 0.00 0.00 0.00 3.53
4441 5917 0.405198 TCATGGTGCAGAATGGTGGT 59.595 50.000 8.33 0.00 35.86 4.16
4482 5958 1.001520 TGCTGCTTCCTTTAGCACGTA 59.998 47.619 0.00 0.00 45.72 3.57
4513 5989 8.225603 TCTGAACTGAATTTTCTTTAGCACTT 57.774 30.769 0.00 0.00 0.00 3.16
4514 5990 9.337396 TCTGAACTGAATTTTCTTTAGCACTTA 57.663 29.630 0.00 0.00 0.00 2.24
4550 6026 7.760131 ACTGAATTGTCTCAAAATGTTTGTG 57.240 32.000 0.98 0.00 0.00 3.33
4600 6077 4.955811 TTTCGGAGGTATGTGCTGATAT 57.044 40.909 0.00 0.00 0.00 1.63
4602 6079 2.029020 TCGGAGGTATGTGCTGATATGC 60.029 50.000 0.00 0.00 0.00 3.14
4626 6103 0.661552 CTGCAAGATTGGGCTCGATG 59.338 55.000 0.00 0.00 34.07 3.84
4765 6242 3.835790 TTTTCGGTCCGGGCAGTGG 62.836 63.158 9.07 0.00 0.00 4.00
4811 6443 2.124278 GGATTTGAGGGGTCCGGC 60.124 66.667 0.00 0.00 0.00 6.13
4841 6473 6.531503 TGCTCTAAGTTAGACATTGCTACT 57.468 37.500 17.75 0.00 0.00 2.57
4849 6481 1.482593 AGACATTGCTACTCCCTTCGG 59.517 52.381 0.00 0.00 0.00 4.30
4868 6500 4.443621 TCGGTCCATATTAATTGACGCAA 58.556 39.130 0.00 0.00 30.27 4.85
4890 6523 8.612619 CGCAATCTTAGTACAACTTTATCCAAT 58.387 33.333 0.00 0.00 0.00 3.16
4934 6567 6.027749 ACTGTCAAACATCACTTTTCGTTTC 58.972 36.000 0.00 0.00 29.40 2.78
4935 6568 6.128007 ACTGTCAAACATCACTTTTCGTTTCT 60.128 34.615 0.00 0.00 29.40 2.52
4936 6569 6.027131 TGTCAAACATCACTTTTCGTTTCTG 58.973 36.000 0.00 0.00 29.40 3.02
4943 6577 3.062909 TCACTTTTCGTTTCTGTGAACCG 59.937 43.478 0.00 0.00 35.15 4.44
4978 6612 5.695851 ACTTGGTGATGATTTGACTGTTC 57.304 39.130 0.00 0.00 0.00 3.18
4989 6623 2.189594 TGACTGTTCCATGGAAGCAG 57.810 50.000 32.94 32.94 38.25 4.24
5066 6700 4.336713 TGACGTCTCAGGATCTCAAGTATG 59.663 45.833 17.92 0.00 0.00 2.39
5107 6741 2.555227 GCTTTCCATTTCCAGGTGAGGA 60.555 50.000 0.00 0.00 35.41 3.71
5123 6757 3.295093 TGAGGATGTCTCAGGATCTGAC 58.705 50.000 0.00 0.00 46.71 3.51
5124 6758 2.293122 GAGGATGTCTCAGGATCTGACG 59.707 54.545 0.00 0.00 42.02 4.35
5145 6779 3.490761 CGTGTTGGCAAATTGGTTTCTCT 60.491 43.478 0.00 0.00 0.00 3.10
5147 6781 5.222631 GTGTTGGCAAATTGGTTTCTCTAG 58.777 41.667 0.00 0.00 0.00 2.43
5148 6782 5.009610 GTGTTGGCAAATTGGTTTCTCTAGA 59.990 40.000 0.00 0.00 0.00 2.43
5149 6783 5.596361 TGTTGGCAAATTGGTTTCTCTAGAA 59.404 36.000 0.00 0.00 0.00 2.10
5150 6784 5.964958 TGGCAAATTGGTTTCTCTAGAAG 57.035 39.130 0.00 0.00 35.21 2.85
5151 6785 5.385198 TGGCAAATTGGTTTCTCTAGAAGT 58.615 37.500 0.00 0.00 35.21 3.01
5152 6786 5.473504 TGGCAAATTGGTTTCTCTAGAAGTC 59.526 40.000 0.00 0.00 35.21 3.01
5153 6787 5.473504 GGCAAATTGGTTTCTCTAGAAGTCA 59.526 40.000 0.00 0.00 35.21 3.41
5154 6788 6.016276 GGCAAATTGGTTTCTCTAGAAGTCAA 60.016 38.462 0.00 10.23 35.21 3.18
5182 6816 3.257935 TGGAAACAACATAGGCGGG 57.742 52.632 0.00 0.00 37.44 6.13
5183 6817 0.693622 TGGAAACAACATAGGCGGGA 59.306 50.000 0.00 0.00 37.44 5.14
5184 6818 1.092348 GGAAACAACATAGGCGGGAC 58.908 55.000 0.00 0.00 0.00 4.46
5185 6819 1.339727 GGAAACAACATAGGCGGGACT 60.340 52.381 0.00 0.00 0.00 3.85
5186 6820 2.007608 GAAACAACATAGGCGGGACTC 58.992 52.381 0.00 0.00 0.00 3.36
5187 6821 1.276622 AACAACATAGGCGGGACTCT 58.723 50.000 0.00 0.00 0.00 3.24
5188 6822 1.276622 ACAACATAGGCGGGACTCTT 58.723 50.000 0.00 0.00 0.00 2.85
5189 6823 1.628846 ACAACATAGGCGGGACTCTTT 59.371 47.619 0.00 0.00 0.00 2.52
5190 6824 2.039879 ACAACATAGGCGGGACTCTTTT 59.960 45.455 0.00 0.00 0.00 2.27
5191 6825 2.678336 CAACATAGGCGGGACTCTTTTC 59.322 50.000 0.00 0.00 0.00 2.29
5192 6826 1.906574 ACATAGGCGGGACTCTTTTCA 59.093 47.619 0.00 0.00 0.00 2.69
5193 6827 2.505819 ACATAGGCGGGACTCTTTTCAT 59.494 45.455 0.00 0.00 0.00 2.57
5194 6828 3.709653 ACATAGGCGGGACTCTTTTCATA 59.290 43.478 0.00 0.00 0.00 2.15
5195 6829 2.990066 AGGCGGGACTCTTTTCATAG 57.010 50.000 0.00 0.00 0.00 2.23
5196 6830 2.188817 AGGCGGGACTCTTTTCATAGT 58.811 47.619 0.00 0.00 0.00 2.12
5197 6831 3.371965 AGGCGGGACTCTTTTCATAGTA 58.628 45.455 0.00 0.00 0.00 1.82
5198 6832 3.132467 AGGCGGGACTCTTTTCATAGTAC 59.868 47.826 0.00 0.00 0.00 2.73
5199 6833 3.118884 GGCGGGACTCTTTTCATAGTACA 60.119 47.826 0.00 0.00 0.00 2.90
5200 6834 4.113354 GCGGGACTCTTTTCATAGTACAG 58.887 47.826 0.00 0.00 0.00 2.74
5201 6835 4.683832 CGGGACTCTTTTCATAGTACAGG 58.316 47.826 0.00 0.00 0.00 4.00
5202 6836 4.159879 CGGGACTCTTTTCATAGTACAGGT 59.840 45.833 0.00 0.00 0.00 4.00
5203 6837 5.359009 CGGGACTCTTTTCATAGTACAGGTA 59.641 44.000 0.00 0.00 0.00 3.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.978083 ATTGCAAATTGCCAACAAACAA 57.022 31.818 15.98 0.45 44.23 2.83
23 24 4.141801 CCATTCAGAACATGATGGGCAATT 60.142 41.667 0.00 0.00 37.89 2.32
61 62 9.076596 GTATCTTTGTCAAAATCAAACTATGCC 57.923 33.333 0.00 0.00 32.48 4.40
62 63 9.076596 GGTATCTTTGTCAAAATCAAACTATGC 57.923 33.333 0.00 0.00 32.48 3.14
75 80 1.707989 TGGCCCTGGTATCTTTGTCAA 59.292 47.619 0.00 0.00 0.00 3.18
117 135 3.497262 CCTCAAGGTTTCGTTTCAGGTAC 59.503 47.826 0.00 0.00 0.00 3.34
127 145 0.593128 CAGTTGCCCTCAAGGTTTCG 59.407 55.000 0.00 0.00 38.26 3.46
142 160 4.879545 ACAGTTTGATACACGTTTCCAGTT 59.120 37.500 0.00 0.00 0.00 3.16
166 184 3.764434 GGAGAACCCTTCAAGAAAATCCC 59.236 47.826 0.00 0.00 0.00 3.85
185 204 0.321671 TTCAGACTTTCAGCGGGGAG 59.678 55.000 0.00 0.00 0.00 4.30
190 209 3.499918 AGTTGGATTTCAGACTTTCAGCG 59.500 43.478 0.00 0.00 0.00 5.18
207 226 0.178992 TCCCACAGGCTTTGAGTTGG 60.179 55.000 1.35 0.00 0.00 3.77
213 232 1.593265 GCCAATCCCACAGGCTTTG 59.407 57.895 0.00 0.00 44.92 2.77
248 267 0.459759 GGGCCTTAGTTCCGACTTCG 60.460 60.000 0.84 0.00 37.33 3.79
255 274 0.678048 CAGCACTGGGCCTTAGTTCC 60.678 60.000 4.53 1.72 46.50 3.62
328 357 9.184523 GACAGAGACCTTGCACTAGATATATAT 57.815 37.037 0.00 0.00 0.00 0.86
329 358 8.164070 TGACAGAGACCTTGCACTAGATATATA 58.836 37.037 0.00 0.00 0.00 0.86
330 359 7.007116 TGACAGAGACCTTGCACTAGATATAT 58.993 38.462 0.00 0.00 0.00 0.86
331 360 6.365520 TGACAGAGACCTTGCACTAGATATA 58.634 40.000 0.00 0.00 0.00 0.86
346 375 2.362397 TGTGGACTTGACTGACAGAGAC 59.638 50.000 10.08 1.03 0.00 3.36
350 379 3.310774 CACTTTGTGGACTTGACTGACAG 59.689 47.826 0.00 0.00 0.00 3.51
458 499 0.534412 AGGGTGTTCTCGCTCATGAG 59.466 55.000 18.84 18.84 37.33 2.90
459 500 0.976641 AAGGGTGTTCTCGCTCATGA 59.023 50.000 0.00 0.00 0.00 3.07
460 501 1.734465 GAAAGGGTGTTCTCGCTCATG 59.266 52.381 0.00 0.00 0.00 3.07
461 502 1.673033 CGAAAGGGTGTTCTCGCTCAT 60.673 52.381 0.00 0.00 0.00 2.90
594 930 5.296748 GTGTTGCCATGAAGTAACCAAATT 58.703 37.500 0.00 0.00 0.00 1.82
595 931 4.262420 GGTGTTGCCATGAAGTAACCAAAT 60.262 41.667 0.00 0.00 37.17 2.32
596 932 3.068873 GGTGTTGCCATGAAGTAACCAAA 59.931 43.478 0.00 0.00 37.17 3.28
615 952 4.266029 GCAGAAATACGCATGATTTTGGTG 59.734 41.667 0.00 0.00 0.00 4.17
616 953 4.423732 GCAGAAATACGCATGATTTTGGT 58.576 39.130 0.00 0.00 0.00 3.67
622 959 1.133823 TGGGGCAGAAATACGCATGAT 60.134 47.619 0.00 0.00 0.00 2.45
642 1242 3.827302 CGTACTTGATATGGAGGCCTAGT 59.173 47.826 4.42 5.36 0.00 2.57
645 1245 1.971357 CCGTACTTGATATGGAGGCCT 59.029 52.381 3.86 3.86 42.04 5.19
662 1262 1.629043 TTGACTACTGAAGCTCCCGT 58.371 50.000 0.00 0.00 0.00 5.28
664 1264 3.055094 TGGATTTGACTACTGAAGCTCCC 60.055 47.826 0.00 0.00 0.00 4.30
673 1273 6.183360 CCAAACACTTTGTGGATTTGACTACT 60.183 38.462 12.33 0.00 38.98 2.57
680 1280 3.133901 GGGTCCAAACACTTTGTGGATTT 59.866 43.478 2.72 0.00 43.19 2.17
714 1315 4.101741 AGCACTGATCTTGGGGTAGATAAC 59.898 45.833 0.00 0.00 35.06 1.89
731 1333 2.281070 ACTGACCGCCAAGCACTG 60.281 61.111 0.00 0.00 0.00 3.66
980 1660 5.299949 CCATTTGGAAGAAAAGGGTTTCAG 58.700 41.667 2.35 0.00 40.77 3.02
1004 1684 5.939764 ACATCTCCATAACAAGTAGCAGA 57.060 39.130 0.00 0.00 0.00 4.26
1046 1726 1.002430 TCTGGAACATGGAGCACACTC 59.998 52.381 0.00 0.00 39.30 3.51
1062 1742 0.035458 AACAGCCCGAAGAACTCTGG 59.965 55.000 0.00 0.00 0.00 3.86
1182 1874 1.843851 TCGCAGGTTATCCTTTCCCAT 59.156 47.619 0.00 0.00 43.07 4.00
1197 1889 0.796312 GGTGTGTGGTATTGTCGCAG 59.204 55.000 0.00 0.00 0.00 5.18
1219 1911 4.645535 TGGAAAAGGTTGAGATGAGACAG 58.354 43.478 0.00 0.00 0.00 3.51
1268 1960 7.333423 AGTTAAAATTCGGACATTCATCTTCGA 59.667 33.333 0.00 0.00 0.00 3.71
1399 2124 6.970484 TGGAAGATTAAAAGAAGAGTTGTGC 58.030 36.000 0.00 0.00 0.00 4.57
1437 2181 6.757897 TGCTTCGGAATAAGATGTGATTTT 57.242 33.333 0.00 0.00 0.00 1.82
1444 2188 6.473455 GGAAATGTTTGCTTCGGAATAAGATG 59.527 38.462 0.00 0.00 0.00 2.90
1454 2198 2.554032 ACCTGAGGAAATGTTTGCTTCG 59.446 45.455 4.99 0.00 39.04 3.79
1655 2406 7.878477 ACAAATTAATTGCATCAGTCAACTG 57.122 32.000 0.39 3.69 43.13 3.16
1657 2408 8.970691 AGTACAAATTAATTGCATCAGTCAAC 57.029 30.769 0.39 0.00 43.13 3.18
1716 2501 4.642445 TTCACGCAGATTACGGAGATTA 57.358 40.909 0.00 0.00 34.00 1.75
1752 2537 3.454812 GGAGGCTACCCTTCAATTGACTA 59.545 47.826 7.89 0.00 43.12 2.59
1765 2550 1.422161 ATGGATGCTGGGAGGCTACC 61.422 60.000 9.51 9.51 0.00 3.18
1766 2551 1.352083 TATGGATGCTGGGAGGCTAC 58.648 55.000 0.00 0.00 0.00 3.58
1767 2552 2.349167 ATATGGATGCTGGGAGGCTA 57.651 50.000 0.00 0.00 0.00 3.93
1768 2553 1.453633 AATATGGATGCTGGGAGGCT 58.546 50.000 0.00 0.00 0.00 4.58
1769 2554 1.891150 CAAATATGGATGCTGGGAGGC 59.109 52.381 0.00 0.00 0.00 4.70
1770 2555 1.891150 GCAAATATGGATGCTGGGAGG 59.109 52.381 2.14 0.00 39.46 4.30
1771 2556 2.295349 GTGCAAATATGGATGCTGGGAG 59.705 50.000 9.11 0.00 42.97 4.30
1772 2557 2.091720 AGTGCAAATATGGATGCTGGGA 60.092 45.455 9.11 0.00 42.97 4.37
1773 2558 2.313317 AGTGCAAATATGGATGCTGGG 58.687 47.619 9.11 0.00 42.97 4.45
1774 2559 3.243636 GGAAGTGCAAATATGGATGCTGG 60.244 47.826 9.11 0.00 42.97 4.85
1775 2560 3.382227 TGGAAGTGCAAATATGGATGCTG 59.618 43.478 9.11 0.00 42.97 4.41
1776 2561 3.382546 GTGGAAGTGCAAATATGGATGCT 59.617 43.478 9.11 0.00 42.97 3.79
1777 2562 3.709987 GTGGAAGTGCAAATATGGATGC 58.290 45.455 0.00 2.35 42.86 3.91
1778 2563 3.793129 GCGTGGAAGTGCAAATATGGATG 60.793 47.826 0.00 0.00 0.00 3.51
1779 2564 2.358898 GCGTGGAAGTGCAAATATGGAT 59.641 45.455 0.00 0.00 0.00 3.41
1780 2565 1.742831 GCGTGGAAGTGCAAATATGGA 59.257 47.619 0.00 0.00 0.00 3.41
1781 2566 1.202290 GGCGTGGAAGTGCAAATATGG 60.202 52.381 0.00 0.00 0.00 2.74
1782 2567 1.745087 AGGCGTGGAAGTGCAAATATG 59.255 47.619 0.00 0.00 0.00 1.78
1783 2568 2.128771 AGGCGTGGAAGTGCAAATAT 57.871 45.000 0.00 0.00 0.00 1.28
1784 2569 1.539388 CAAGGCGTGGAAGTGCAAATA 59.461 47.619 0.00 0.00 0.00 1.40
1785 2570 0.314935 CAAGGCGTGGAAGTGCAAAT 59.685 50.000 0.00 0.00 0.00 2.32
1786 2571 0.749818 TCAAGGCGTGGAAGTGCAAA 60.750 50.000 0.00 0.00 0.00 3.68
1787 2572 1.153066 TCAAGGCGTGGAAGTGCAA 60.153 52.632 0.00 0.00 0.00 4.08
1788 2573 1.597854 CTCAAGGCGTGGAAGTGCA 60.598 57.895 0.00 0.00 0.00 4.57
1789 2574 0.320421 TACTCAAGGCGTGGAAGTGC 60.320 55.000 0.00 0.00 0.00 4.40
1790 2575 1.429463 GTACTCAAGGCGTGGAAGTG 58.571 55.000 0.00 0.00 0.00 3.16
1791 2576 0.320697 GGTACTCAAGGCGTGGAAGT 59.679 55.000 0.00 0.30 0.00 3.01
1792 2577 0.608640 AGGTACTCAAGGCGTGGAAG 59.391 55.000 0.00 0.00 0.00 3.46
1793 2578 0.320374 CAGGTACTCAAGGCGTGGAA 59.680 55.000 0.00 0.00 34.60 3.53
1794 2579 1.541310 CCAGGTACTCAAGGCGTGGA 61.541 60.000 0.00 0.00 39.66 4.02
1795 2580 1.079127 CCAGGTACTCAAGGCGTGG 60.079 63.158 0.00 0.00 34.60 4.94
1796 2581 0.537188 ATCCAGGTACTCAAGGCGTG 59.463 55.000 0.00 0.00 34.60 5.34
1797 2582 0.824759 GATCCAGGTACTCAAGGCGT 59.175 55.000 0.00 0.00 34.60 5.68
1798 2583 1.115467 AGATCCAGGTACTCAAGGCG 58.885 55.000 0.00 0.00 34.60 5.52
1799 2584 3.055094 TGAAAGATCCAGGTACTCAAGGC 60.055 47.826 0.00 0.00 34.60 4.35
1800 2585 4.826274 TGAAAGATCCAGGTACTCAAGG 57.174 45.455 0.00 0.00 34.60 3.61
1801 2586 6.878317 TGTATGAAAGATCCAGGTACTCAAG 58.122 40.000 0.00 0.00 34.60 3.02
1802 2587 6.867519 TGTATGAAAGATCCAGGTACTCAA 57.132 37.500 0.00 0.00 34.60 3.02
1803 2588 6.351881 GGTTGTATGAAAGATCCAGGTACTCA 60.352 42.308 0.00 0.00 34.60 3.41
1804 2589 6.049790 GGTTGTATGAAAGATCCAGGTACTC 58.950 44.000 0.00 0.00 34.60 2.59
1805 2590 5.726793 AGGTTGTATGAAAGATCCAGGTACT 59.273 40.000 0.00 0.00 43.88 2.73
1806 2591 5.990668 AGGTTGTATGAAAGATCCAGGTAC 58.009 41.667 0.00 0.00 0.00 3.34
1807 2592 5.964477 AGAGGTTGTATGAAAGATCCAGGTA 59.036 40.000 0.00 0.00 0.00 3.08
1808 2593 4.785376 AGAGGTTGTATGAAAGATCCAGGT 59.215 41.667 0.00 0.00 0.00 4.00
1809 2594 5.365021 AGAGGTTGTATGAAAGATCCAGG 57.635 43.478 0.00 0.00 0.00 4.45
1810 2595 5.521735 CGAAGAGGTTGTATGAAAGATCCAG 59.478 44.000 0.00 0.00 0.00 3.86
1811 2596 5.186992 TCGAAGAGGTTGTATGAAAGATCCA 59.813 40.000 0.00 0.00 0.00 3.41
1812 2597 5.661458 TCGAAGAGGTTGTATGAAAGATCC 58.339 41.667 0.00 0.00 0.00 3.36
1813 2598 6.256757 CCTTCGAAGAGGTTGTATGAAAGATC 59.743 42.308 26.61 0.00 38.43 2.75
1814 2599 6.070767 TCCTTCGAAGAGGTTGTATGAAAGAT 60.071 38.462 26.61 0.00 38.43 2.40
1815 2600 5.245301 TCCTTCGAAGAGGTTGTATGAAAGA 59.755 40.000 26.61 6.80 38.43 2.52
1816 2601 5.348997 GTCCTTCGAAGAGGTTGTATGAAAG 59.651 44.000 26.61 4.45 38.43 2.62
1817 2602 5.221561 TGTCCTTCGAAGAGGTTGTATGAAA 60.222 40.000 26.61 4.01 38.43 2.69
1818 2603 4.282449 TGTCCTTCGAAGAGGTTGTATGAA 59.718 41.667 26.61 1.08 38.43 2.57
1819 2604 3.830178 TGTCCTTCGAAGAGGTTGTATGA 59.170 43.478 26.61 8.68 38.43 2.15
1820 2605 4.188247 TGTCCTTCGAAGAGGTTGTATG 57.812 45.455 26.61 6.35 38.43 2.39
1821 2606 6.732896 ATATGTCCTTCGAAGAGGTTGTAT 57.267 37.500 26.61 12.71 38.43 2.29
1822 2607 6.040166 GGTATATGTCCTTCGAAGAGGTTGTA 59.960 42.308 26.61 11.13 38.43 2.41
1823 2608 5.163437 GGTATATGTCCTTCGAAGAGGTTGT 60.163 44.000 26.61 10.38 38.43 3.32
1824 2609 5.069251 AGGTATATGTCCTTCGAAGAGGTTG 59.931 44.000 26.61 9.30 38.43 3.77
1825 2610 5.209659 AGGTATATGTCCTTCGAAGAGGTT 58.790 41.667 26.61 10.71 38.43 3.50
1826 2611 4.805744 AGGTATATGTCCTTCGAAGAGGT 58.194 43.478 26.61 11.38 38.43 3.85
1827 2612 8.577048 TTATAGGTATATGTCCTTCGAAGAGG 57.423 38.462 26.61 12.01 38.43 3.69
1828 2613 9.843334 GTTTATAGGTATATGTCCTTCGAAGAG 57.157 37.037 26.61 15.87 38.43 2.85
1829 2614 9.584008 AGTTTATAGGTATATGTCCTTCGAAGA 57.416 33.333 26.61 7.14 36.60 2.87
1844 2629 8.139989 GCAAGTTCCGAGATAAGTTTATAGGTA 58.860 37.037 0.00 0.00 0.00 3.08
1845 2630 6.985059 GCAAGTTCCGAGATAAGTTTATAGGT 59.015 38.462 0.00 0.00 0.00 3.08
1846 2631 6.144080 CGCAAGTTCCGAGATAAGTTTATAGG 59.856 42.308 0.00 0.00 0.00 2.57
1847 2632 6.916387 TCGCAAGTTCCGAGATAAGTTTATAG 59.084 38.462 0.00 0.00 39.48 1.31
1848 2633 6.798482 TCGCAAGTTCCGAGATAAGTTTATA 58.202 36.000 0.00 0.00 39.48 0.98
1849 2634 5.657474 TCGCAAGTTCCGAGATAAGTTTAT 58.343 37.500 0.00 0.00 39.48 1.40
1850 2635 5.063180 TCGCAAGTTCCGAGATAAGTTTA 57.937 39.130 0.00 0.00 39.48 2.01
1851 2636 3.921677 TCGCAAGTTCCGAGATAAGTTT 58.078 40.909 0.00 0.00 39.48 2.66
1852 2637 3.587797 TCGCAAGTTCCGAGATAAGTT 57.412 42.857 0.00 0.00 39.48 2.66
1853 2638 3.802948 ATCGCAAGTTCCGAGATAAGT 57.197 42.857 0.00 0.00 38.20 2.24
1854 2639 3.302740 GCAATCGCAAGTTCCGAGATAAG 60.303 47.826 0.00 0.00 38.20 1.73
1855 2640 2.607635 GCAATCGCAAGTTCCGAGATAA 59.392 45.455 0.00 0.00 38.20 1.75
1856 2641 2.201732 GCAATCGCAAGTTCCGAGATA 58.798 47.619 0.00 0.00 38.20 1.98
1857 2642 1.009829 GCAATCGCAAGTTCCGAGAT 58.990 50.000 0.00 0.00 38.20 2.75
1858 2643 1.351430 CGCAATCGCAAGTTCCGAGA 61.351 55.000 0.00 0.00 38.20 4.04
1859 2644 1.059369 CGCAATCGCAAGTTCCGAG 59.941 57.895 0.00 0.00 38.20 4.63
1860 2645 1.351430 CTCGCAATCGCAAGTTCCGA 61.351 55.000 0.00 0.00 38.40 4.55
1861 2646 1.059369 CTCGCAATCGCAAGTTCCG 59.941 57.895 0.00 0.00 38.40 4.30
1862 2647 0.796312 TTCTCGCAATCGCAAGTTCC 59.204 50.000 0.00 0.00 38.40 3.62
1863 2648 2.813779 ATTCTCGCAATCGCAAGTTC 57.186 45.000 0.00 0.00 38.40 3.01
1864 2649 2.226437 ACAATTCTCGCAATCGCAAGTT 59.774 40.909 0.00 0.00 38.40 2.66
1865 2650 1.806542 ACAATTCTCGCAATCGCAAGT 59.193 42.857 0.00 0.00 38.40 3.16
1866 2651 2.532531 ACAATTCTCGCAATCGCAAG 57.467 45.000 0.00 0.00 38.40 4.01
1867 2652 4.614555 AATACAATTCTCGCAATCGCAA 57.385 36.364 0.00 0.00 38.40 4.85
1868 2653 4.094146 TCAAATACAATTCTCGCAATCGCA 59.906 37.500 0.00 0.00 38.40 5.10
1869 2654 4.434588 GTCAAATACAATTCTCGCAATCGC 59.565 41.667 0.00 0.00 35.26 4.58
1870 2655 5.799960 AGTCAAATACAATTCTCGCAATCG 58.200 37.500 0.00 0.00 0.00 3.34
1871 2656 7.750458 TGAAAGTCAAATACAATTCTCGCAATC 59.250 33.333 0.00 0.00 31.18 2.67
1872 2657 7.592938 TGAAAGTCAAATACAATTCTCGCAAT 58.407 30.769 0.00 0.00 31.18 3.56
1873 2658 6.964908 TGAAAGTCAAATACAATTCTCGCAA 58.035 32.000 0.00 0.00 31.18 4.85
1874 2659 6.552859 TGAAAGTCAAATACAATTCTCGCA 57.447 33.333 0.00 0.00 31.18 5.10
1875 2660 9.214953 CTATTGAAAGTCAAATACAATTCTCGC 57.785 33.333 0.00 0.00 40.12 5.03
1884 2669 9.994432 CCACTCAATCTATTGAAAGTCAAATAC 57.006 33.333 6.82 0.00 45.26 1.89
1885 2670 9.958180 TCCACTCAATCTATTGAAAGTCAAATA 57.042 29.630 6.82 0.00 45.26 1.40
1886 2671 8.868522 TCCACTCAATCTATTGAAAGTCAAAT 57.131 30.769 6.82 0.00 45.26 2.32
1887 2672 7.391554 CCTCCACTCAATCTATTGAAAGTCAAA 59.608 37.037 6.82 0.00 45.26 2.69
1888 2673 6.881065 CCTCCACTCAATCTATTGAAAGTCAA 59.119 38.462 6.82 0.00 45.26 3.18
1889 2674 6.409704 CCTCCACTCAATCTATTGAAAGTCA 58.590 40.000 6.82 0.00 45.26 3.41
1890 2675 5.295540 GCCTCCACTCAATCTATTGAAAGTC 59.704 44.000 6.82 0.00 45.26 3.01
1891 2676 5.189180 GCCTCCACTCAATCTATTGAAAGT 58.811 41.667 6.82 0.31 45.26 2.66
1892 2677 4.578105 GGCCTCCACTCAATCTATTGAAAG 59.422 45.833 6.82 2.87 45.26 2.62
1893 2678 4.228210 AGGCCTCCACTCAATCTATTGAAA 59.772 41.667 0.00 0.00 45.26 2.69
1894 2679 3.782523 AGGCCTCCACTCAATCTATTGAA 59.217 43.478 0.00 0.00 45.26 2.69
1895 2680 3.387962 AGGCCTCCACTCAATCTATTGA 58.612 45.455 0.00 5.34 43.94 2.57
1896 2681 3.737850 GAGGCCTCCACTCAATCTATTG 58.262 50.000 23.19 0.00 39.10 1.90
1910 2695 1.213296 TAAGGATGTTGGGAGGCCTC 58.787 55.000 25.59 25.59 0.00 4.70
1911 2696 1.912862 ATAAGGATGTTGGGAGGCCT 58.087 50.000 3.86 3.86 0.00 5.19
1912 2697 2.695147 CAAATAAGGATGTTGGGAGGCC 59.305 50.000 0.00 0.00 0.00 5.19
1913 2698 2.101415 GCAAATAAGGATGTTGGGAGGC 59.899 50.000 0.00 0.00 0.00 4.70
1914 2699 3.131046 GTGCAAATAAGGATGTTGGGAGG 59.869 47.826 0.00 0.00 0.00 4.30
1915 2700 4.019174 AGTGCAAATAAGGATGTTGGGAG 58.981 43.478 0.00 0.00 0.00 4.30
1916 2701 4.046286 AGTGCAAATAAGGATGTTGGGA 57.954 40.909 0.00 0.00 0.00 4.37
1917 2702 4.381932 GGAAGTGCAAATAAGGATGTTGGG 60.382 45.833 0.00 0.00 0.00 4.12
1918 2703 4.220382 TGGAAGTGCAAATAAGGATGTTGG 59.780 41.667 0.00 0.00 0.00 3.77
1919 2704 5.163513 GTGGAAGTGCAAATAAGGATGTTG 58.836 41.667 0.00 0.00 0.00 3.33
1920 2705 4.082787 CGTGGAAGTGCAAATAAGGATGTT 60.083 41.667 0.00 0.00 0.00 2.71
1921 2706 3.440173 CGTGGAAGTGCAAATAAGGATGT 59.560 43.478 0.00 0.00 0.00 3.06
1922 2707 3.181497 CCGTGGAAGTGCAAATAAGGATG 60.181 47.826 0.00 0.00 0.00 3.51
1923 2708 3.016736 CCGTGGAAGTGCAAATAAGGAT 58.983 45.455 0.00 0.00 0.00 3.24
1924 2709 2.432444 CCGTGGAAGTGCAAATAAGGA 58.568 47.619 0.00 0.00 0.00 3.36
1925 2710 1.135402 GCCGTGGAAGTGCAAATAAGG 60.135 52.381 0.00 0.00 0.00 2.69
1926 2711 1.812571 AGCCGTGGAAGTGCAAATAAG 59.187 47.619 0.00 0.00 0.00 1.73
1927 2712 1.904287 AGCCGTGGAAGTGCAAATAA 58.096 45.000 0.00 0.00 0.00 1.40
1928 2713 1.539388 CAAGCCGTGGAAGTGCAAATA 59.461 47.619 0.00 0.00 0.00 1.40
1929 2714 0.314935 CAAGCCGTGGAAGTGCAAAT 59.685 50.000 0.00 0.00 0.00 2.32
1930 2715 0.749818 TCAAGCCGTGGAAGTGCAAA 60.750 50.000 0.00 0.00 0.00 3.68
1931 2716 1.153066 TCAAGCCGTGGAAGTGCAA 60.153 52.632 0.00 0.00 0.00 4.08
1932 2717 1.597854 CTCAAGCCGTGGAAGTGCA 60.598 57.895 0.00 0.00 0.00 4.57
1933 2718 0.320421 TACTCAAGCCGTGGAAGTGC 60.320 55.000 0.00 0.00 0.00 4.40
1934 2719 1.000955 AGTACTCAAGCCGTGGAAGTG 59.999 52.381 0.00 0.00 0.00 3.16
1935 2720 1.339097 AGTACTCAAGCCGTGGAAGT 58.661 50.000 0.00 0.00 0.00 3.01
1936 2721 2.069273 CAAGTACTCAAGCCGTGGAAG 58.931 52.381 0.00 0.00 0.00 3.46
1937 2722 1.270625 CCAAGTACTCAAGCCGTGGAA 60.271 52.381 0.00 0.00 0.00 3.53
1938 2723 0.320374 CCAAGTACTCAAGCCGTGGA 59.680 55.000 0.00 0.00 0.00 4.02
1939 2724 0.320374 TCCAAGTACTCAAGCCGTGG 59.680 55.000 0.00 0.00 0.00 4.94
1940 2725 2.093973 AGATCCAAGTACTCAAGCCGTG 60.094 50.000 0.00 0.00 0.00 4.94
1941 2726 2.180276 AGATCCAAGTACTCAAGCCGT 58.820 47.619 0.00 0.00 0.00 5.68
1942 2727 2.969628 AGATCCAAGTACTCAAGCCG 57.030 50.000 0.00 0.00 0.00 5.52
1943 2728 4.579869 TGAAAGATCCAAGTACTCAAGCC 58.420 43.478 0.00 0.00 0.00 4.35
1944 2729 5.482908 TCTGAAAGATCCAAGTACTCAAGC 58.517 41.667 0.00 0.00 38.67 4.01
1957 2742 7.607991 TCCTTGAAATAGGTTGTCTGAAAGATC 59.392 37.037 0.00 0.00 40.04 2.75
1958 2743 7.391833 GTCCTTGAAATAGGTTGTCTGAAAGAT 59.608 37.037 0.00 0.00 40.04 2.40
1959 2744 6.710744 GTCCTTGAAATAGGTTGTCTGAAAGA 59.289 38.462 0.00 0.00 37.30 2.52
1960 2745 6.486657 TGTCCTTGAAATAGGTTGTCTGAAAG 59.513 38.462 0.00 0.00 36.63 2.62
1961 2746 6.361433 TGTCCTTGAAATAGGTTGTCTGAAA 58.639 36.000 0.00 0.00 36.63 2.69
1962 2747 5.935945 TGTCCTTGAAATAGGTTGTCTGAA 58.064 37.500 0.00 0.00 36.63 3.02
1963 2748 5.560722 TGTCCTTGAAATAGGTTGTCTGA 57.439 39.130 0.00 0.00 36.63 3.27
1964 2749 8.511604 AATATGTCCTTGAAATAGGTTGTCTG 57.488 34.615 0.00 0.00 36.63 3.51
1965 2750 8.552296 AGAATATGTCCTTGAAATAGGTTGTCT 58.448 33.333 0.00 0.00 36.63 3.41
1966 2751 8.738645 AGAATATGTCCTTGAAATAGGTTGTC 57.261 34.615 0.00 0.00 36.63 3.18
1975 2760 9.567776 TGAGTTTGTAAGAATATGTCCTTGAAA 57.432 29.630 0.00 0.00 0.00 2.69
1976 2761 9.739276 ATGAGTTTGTAAGAATATGTCCTTGAA 57.261 29.630 0.00 0.00 0.00 2.69
1977 2762 9.383519 GATGAGTTTGTAAGAATATGTCCTTGA 57.616 33.333 0.00 0.00 0.00 3.02
1978 2763 9.388506 AGATGAGTTTGTAAGAATATGTCCTTG 57.611 33.333 0.00 0.00 0.00 3.61
1979 2764 9.965902 AAGATGAGTTTGTAAGAATATGTCCTT 57.034 29.630 0.00 0.00 0.00 3.36
1980 2765 9.388506 CAAGATGAGTTTGTAAGAATATGTCCT 57.611 33.333 0.00 0.00 0.00 3.85
1981 2766 8.616076 CCAAGATGAGTTTGTAAGAATATGTCC 58.384 37.037 0.00 0.00 0.00 4.02
1982 2767 9.383519 TCCAAGATGAGTTTGTAAGAATATGTC 57.616 33.333 0.00 0.00 0.00 3.06
1983 2768 9.739276 TTCCAAGATGAGTTTGTAAGAATATGT 57.261 29.630 0.00 0.00 0.00 2.29
1984 2769 9.994432 GTTCCAAGATGAGTTTGTAAGAATATG 57.006 33.333 0.00 0.00 0.00 1.78
1985 2770 9.178758 GGTTCCAAGATGAGTTTGTAAGAATAT 57.821 33.333 0.00 0.00 0.00 1.28
1986 2771 8.383175 AGGTTCCAAGATGAGTTTGTAAGAATA 58.617 33.333 0.00 0.00 0.00 1.75
1987 2772 7.234355 AGGTTCCAAGATGAGTTTGTAAGAAT 58.766 34.615 0.00 0.00 0.00 2.40
1988 2773 6.601332 AGGTTCCAAGATGAGTTTGTAAGAA 58.399 36.000 0.00 0.00 0.00 2.52
1989 2774 6.187727 AGGTTCCAAGATGAGTTTGTAAGA 57.812 37.500 0.00 0.00 0.00 2.10
1990 2775 5.412904 GGAGGTTCCAAGATGAGTTTGTAAG 59.587 44.000 0.00 0.00 36.28 2.34
1991 2776 5.313712 GGAGGTTCCAAGATGAGTTTGTAA 58.686 41.667 0.00 0.00 36.28 2.41
1992 2777 4.562757 CGGAGGTTCCAAGATGAGTTTGTA 60.563 45.833 0.00 0.00 35.91 2.41
1993 2778 3.756117 GGAGGTTCCAAGATGAGTTTGT 58.244 45.455 0.00 0.00 36.28 2.83
1994 2779 2.744202 CGGAGGTTCCAAGATGAGTTTG 59.256 50.000 0.00 0.00 35.91 2.93
1995 2780 2.637872 TCGGAGGTTCCAAGATGAGTTT 59.362 45.455 0.00 0.00 35.91 2.66
1996 2781 2.234908 CTCGGAGGTTCCAAGATGAGTT 59.765 50.000 0.00 0.00 35.91 3.01
1997 2782 1.827969 CTCGGAGGTTCCAAGATGAGT 59.172 52.381 0.00 0.00 35.91 3.41
1998 2783 1.472376 GCTCGGAGGTTCCAAGATGAG 60.472 57.143 7.20 0.00 35.91 2.90
1999 2784 0.537188 GCTCGGAGGTTCCAAGATGA 59.463 55.000 7.20 0.00 35.91 2.92
2000 2785 0.250234 TGCTCGGAGGTTCCAAGATG 59.750 55.000 7.20 0.00 35.91 2.90
2001 2786 1.207791 ATGCTCGGAGGTTCCAAGAT 58.792 50.000 7.20 0.00 35.91 2.40
2002 2787 0.984230 AATGCTCGGAGGTTCCAAGA 59.016 50.000 7.20 0.00 35.91 3.02
2003 2788 1.089920 CAATGCTCGGAGGTTCCAAG 58.910 55.000 7.20 0.00 35.91 3.61
2004 2789 0.960364 GCAATGCTCGGAGGTTCCAA 60.960 55.000 7.20 0.00 35.91 3.53
2005 2790 1.377202 GCAATGCTCGGAGGTTCCA 60.377 57.895 7.20 0.00 35.91 3.53
2013 2798 0.748450 ATCCCAAATGCAATGCTCGG 59.252 50.000 6.82 1.33 0.00 4.63
2051 2836 0.474184 AAATACGGATGCTGGGAGGG 59.526 55.000 0.00 0.00 0.00 4.30
2198 3403 4.037690 GCATGAAAGTGCAAATACGGATC 58.962 43.478 0.00 0.00 44.43 3.36
2273 3616 4.507710 TGATGTACACTTCCAAGATGAGC 58.492 43.478 0.00 0.00 0.00 4.26
2307 3650 3.997021 GCCTGTTATCAGATAACCGGATG 59.003 47.826 32.69 17.69 46.71 3.51
2422 3765 0.461135 GGTACCCAGCCATGCATTTG 59.539 55.000 0.00 0.00 0.00 2.32
2616 3959 8.097038 ACTAGTGAGTTATTTGCAAGATTCAGA 58.903 33.333 0.00 0.00 28.61 3.27
2670 4013 9.131791 ACATTCACCTGTTTAAGATTAGTTTGT 57.868 29.630 0.00 0.00 0.00 2.83
2757 4153 3.559655 TGCGGGAAACATCGAGAATTATG 59.440 43.478 0.00 0.00 0.00 1.90
2781 4177 5.943416 TGGTGGTATTGTTCCAGAAATAGTG 59.057 40.000 0.00 0.00 35.49 2.74
2806 4202 0.669318 ATGCTGCTGTTGCACAATGC 60.669 50.000 0.00 0.00 45.31 3.56
2872 4277 3.360249 ACAATCAGTGAACAAGCAAGC 57.640 42.857 0.00 0.00 0.00 4.01
2967 4377 1.140052 TGTATTGCCCATAGGTCACCG 59.860 52.381 0.00 0.00 34.57 4.94
3222 4632 1.300697 GTCGCAGTTTGGGAGACGT 60.301 57.895 0.00 0.00 40.09 4.34
3239 4649 5.655532 AGAAACGTGAGGTATACCATAGTGT 59.344 40.000 23.87 12.44 38.89 3.55
3257 4667 1.475280 TCCCCGATACACTCAGAAACG 59.525 52.381 0.00 0.00 0.00 3.60
3327 4739 6.709846 ACTGATTATTGCTGAGATCTAAAGCC 59.290 38.462 21.38 9.70 36.05 4.35
3379 4791 7.721286 AAAGTACACTGACTTGAGAAAGATG 57.279 36.000 0.00 0.00 39.62 2.90
3478 4890 2.363220 CGAAAGTTTGTTGTGCGAGAC 58.637 47.619 0.00 0.00 0.00 3.36
3551 4978 2.988688 GCTGCGGGCCAATTTTCGA 61.989 57.895 4.39 0.00 34.27 3.71
3556 4989 3.280938 TACCAGCTGCGGGCCAATT 62.281 57.895 18.94 1.34 43.05 2.32
3594 5039 2.006888 ACAAAGTCCGCACCATATTCG 58.993 47.619 0.00 0.00 0.00 3.34
3861 5309 2.289010 CCCATTCAGCCTGTTTTTGGAC 60.289 50.000 0.00 0.00 0.00 4.02
3882 5330 3.081061 TGTCAACTGCCATGGTATCAAC 58.919 45.455 14.67 5.80 0.00 3.18
4046 5495 2.658285 CAGTACCATTCCATGCCACAT 58.342 47.619 0.00 0.00 0.00 3.21
4151 5600 5.516339 CCAAATGAATGGCAGAATACGAAAC 59.484 40.000 0.00 0.00 32.78 2.78
4199 5648 3.898741 CCCTCTCTCCATCTTTACCTACC 59.101 52.174 0.00 0.00 0.00 3.18
4270 5729 8.621532 ATTCTTACTTGACAAAGCAGATTACA 57.378 30.769 0.00 0.00 36.84 2.41
4325 5801 8.070171 ACATTGATTCTTACTCGACAAAGTTTG 58.930 33.333 14.13 14.13 0.00 2.93
4346 5822 8.531146 ACCATTCAGGGTTCTATTTTTACATTG 58.469 33.333 0.00 0.00 43.89 2.82
4348 5824 7.124147 CCACCATTCAGGGTTCTATTTTTACAT 59.876 37.037 0.00 0.00 43.89 2.29
4378 5854 3.022557 ACATCCAACCCCTGATGATTG 57.977 47.619 6.50 0.00 40.64 2.67
4382 5858 3.865684 GCAAAAACATCCAACCCCTGATG 60.866 47.826 0.00 0.00 43.16 3.07
4395 5871 4.516323 ACAAGAAAAGGCAGCAAAAACAT 58.484 34.783 0.00 0.00 0.00 2.71
4441 5917 5.301551 AGCACCAAAATCTCAACATTACACA 59.698 36.000 0.00 0.00 0.00 3.72
4517 5993 9.874205 ATTTTGAGACAATTCAGTTCAGAAAAA 57.126 25.926 0.00 0.00 0.00 1.94
4518 5994 9.304731 CATTTTGAGACAATTCAGTTCAGAAAA 57.695 29.630 0.00 0.00 0.00 2.29
4519 5995 8.469200 ACATTTTGAGACAATTCAGTTCAGAAA 58.531 29.630 0.00 0.00 0.00 2.52
4521 5997 7.572523 ACATTTTGAGACAATTCAGTTCAGA 57.427 32.000 0.00 0.00 0.00 3.27
4522 5998 8.537223 CAAACATTTTGAGACAATTCAGTTCAG 58.463 33.333 0.00 0.00 0.00 3.02
4523 5999 8.034215 ACAAACATTTTGAGACAATTCAGTTCA 58.966 29.630 5.67 0.00 0.00 3.18
4524 6000 8.323140 CACAAACATTTTGAGACAATTCAGTTC 58.677 33.333 5.67 0.00 0.00 3.01
4525 6001 8.034215 TCACAAACATTTTGAGACAATTCAGTT 58.966 29.630 5.67 0.00 0.00 3.16
4526 6002 7.546358 TCACAAACATTTTGAGACAATTCAGT 58.454 30.769 5.67 0.00 0.00 3.41
4527 6003 7.990541 TCACAAACATTTTGAGACAATTCAG 57.009 32.000 5.67 0.00 0.00 3.02
4528 6004 7.438757 CCATCACAAACATTTTGAGACAATTCA 59.561 33.333 5.67 0.00 0.00 2.57
4529 6005 7.439056 ACCATCACAAACATTTTGAGACAATTC 59.561 33.333 5.67 0.00 0.00 2.17
4530 6006 7.274447 ACCATCACAAACATTTTGAGACAATT 58.726 30.769 5.67 0.00 0.00 2.32
4531 6007 6.819284 ACCATCACAAACATTTTGAGACAAT 58.181 32.000 5.67 0.00 0.00 2.71
4532 6008 6.219417 ACCATCACAAACATTTTGAGACAA 57.781 33.333 5.67 0.00 0.00 3.18
4533 6009 5.850557 ACCATCACAAACATTTTGAGACA 57.149 34.783 5.67 0.00 0.00 3.41
4534 6010 7.202016 TCTACCATCACAAACATTTTGAGAC 57.798 36.000 5.67 0.00 0.00 3.36
4535 6011 7.815840 TTCTACCATCACAAACATTTTGAGA 57.184 32.000 5.67 3.71 0.00 3.27
4582 6058 2.028658 AGCATATCAGCACATACCTCCG 60.029 50.000 0.00 0.00 36.85 4.63
4600 6077 1.466856 CCCAATCTTGCAGCTTAGCA 58.533 50.000 7.07 0.00 43.99 3.49
4602 6079 1.674962 GAGCCCAATCTTGCAGCTTAG 59.325 52.381 0.00 0.00 36.70 2.18
4626 6103 4.874396 GTGACAAAAGGGGCTATGTAGTAC 59.126 45.833 0.00 0.00 0.00 2.73
4709 6186 2.915349 CAGCAGCCATAGACACAAGAT 58.085 47.619 0.00 0.00 0.00 2.40
4849 6481 8.774586 ACTAAGATTGCGTCAATTAATATGGAC 58.225 33.333 6.54 0.00 33.90 4.02
4890 6523 6.291377 ACAGTTGAGAGATAGCAGTTGAAAA 58.709 36.000 0.00 0.00 0.00 2.29
4893 6526 4.524328 TGACAGTTGAGAGATAGCAGTTGA 59.476 41.667 0.00 0.00 0.00 3.18
4934 6567 2.802787 ACTTCTCTGACGGTTCACAG 57.197 50.000 0.00 0.00 35.72 3.66
4935 6568 3.536956 AAACTTCTCTGACGGTTCACA 57.463 42.857 0.00 0.00 0.00 3.58
4936 6569 4.618965 AGTAAACTTCTCTGACGGTTCAC 58.381 43.478 0.00 0.00 0.00 3.18
4943 6577 6.223852 TCATCACCAAGTAAACTTCTCTGAC 58.776 40.000 0.00 0.00 33.11 3.51
5043 6677 2.796557 ACTTGAGATCCTGAGACGTCA 58.203 47.619 19.50 0.00 0.00 4.35
5045 6679 4.274147 ACATACTTGAGATCCTGAGACGT 58.726 43.478 0.00 0.00 0.00 4.34
5087 6721 3.439857 TCCTCACCTGGAAATGGAAAG 57.560 47.619 0.00 0.00 32.39 2.62
5088 6722 3.075882 ACATCCTCACCTGGAAATGGAAA 59.924 43.478 0.00 0.00 39.85 3.13
5089 6723 2.649312 ACATCCTCACCTGGAAATGGAA 59.351 45.455 0.00 0.00 39.85 3.53
5090 6724 2.239654 GACATCCTCACCTGGAAATGGA 59.760 50.000 0.00 2.82 39.85 3.41
5091 6725 2.240667 AGACATCCTCACCTGGAAATGG 59.759 50.000 0.00 0.00 39.85 3.16
5092 6726 3.054875 TGAGACATCCTCACCTGGAAATG 60.055 47.826 0.00 0.00 46.38 2.32
5093 6727 3.184628 TGAGACATCCTCACCTGGAAAT 58.815 45.455 0.00 0.00 46.38 2.17
5107 6741 2.451490 ACACGTCAGATCCTGAGACAT 58.549 47.619 0.00 0.00 41.46 3.06
5123 6757 2.794350 GAGAAACCAATTTGCCAACACG 59.206 45.455 0.00 0.00 0.00 4.49
5124 6758 4.058721 AGAGAAACCAATTTGCCAACAC 57.941 40.909 0.00 0.00 0.00 3.32
5145 6779 9.130661 TGTTTCCATTGAGATTTTTGACTTCTA 57.869 29.630 0.00 0.00 0.00 2.10
5147 6781 8.542953 GTTGTTTCCATTGAGATTTTTGACTTC 58.457 33.333 0.00 0.00 0.00 3.01
5148 6782 8.040132 TGTTGTTTCCATTGAGATTTTTGACTT 58.960 29.630 0.00 0.00 0.00 3.01
5149 6783 7.555087 TGTTGTTTCCATTGAGATTTTTGACT 58.445 30.769 0.00 0.00 0.00 3.41
5150 6784 7.769272 TGTTGTTTCCATTGAGATTTTTGAC 57.231 32.000 0.00 0.00 0.00 3.18
5151 6785 9.695526 CTATGTTGTTTCCATTGAGATTTTTGA 57.304 29.630 0.00 0.00 0.00 2.69
5152 6786 8.928733 CCTATGTTGTTTCCATTGAGATTTTTG 58.071 33.333 0.00 0.00 0.00 2.44
5153 6787 7.603784 GCCTATGTTGTTTCCATTGAGATTTTT 59.396 33.333 0.00 0.00 0.00 1.94
5154 6788 7.099120 GCCTATGTTGTTTCCATTGAGATTTT 58.901 34.615 0.00 0.00 0.00 1.82
5176 6810 2.188817 ACTATGAAAAGAGTCCCGCCT 58.811 47.619 0.00 0.00 0.00 5.52
5177 6811 2.693267 ACTATGAAAAGAGTCCCGCC 57.307 50.000 0.00 0.00 0.00 6.13
5178 6812 4.113354 CTGTACTATGAAAAGAGTCCCGC 58.887 47.826 0.00 0.00 0.00 6.13
5179 6813 4.159879 ACCTGTACTATGAAAAGAGTCCCG 59.840 45.833 0.00 0.00 0.00 5.14
5180 6814 5.678955 ACCTGTACTATGAAAAGAGTCCC 57.321 43.478 0.00 0.00 0.00 4.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.