Multiple sequence alignment - TraesCS2B01G071600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G071600 chr2B 100.000 3017 0 0 1 3017 38051116 38048100 0.000000e+00 5572.0
1 TraesCS2B01G071600 chr2B 92.663 1322 62 17 794 2094 38421868 38420561 0.000000e+00 1871.0
2 TraesCS2B01G071600 chr2B 91.935 1240 72 11 794 2018 39091254 39090028 0.000000e+00 1711.0
3 TraesCS2B01G071600 chr2B 84.488 1025 132 13 991 2000 39333275 39334287 0.000000e+00 987.0
4 TraesCS2B01G071600 chr2B 83.976 1011 133 21 998 1987 39158986 39157984 0.000000e+00 942.0
5 TraesCS2B01G071600 chr2B 92.555 497 35 2 295 790 674230914 674230419 0.000000e+00 712.0
6 TraesCS2B01G071600 chr2A 91.629 1326 85 14 791 2094 24407033 24408354 0.000000e+00 1810.0
7 TraesCS2B01G071600 chr2A 84.378 1005 133 13 997 1989 24181949 24180957 0.000000e+00 965.0
8 TraesCS2B01G071600 chr2A 85.410 891 112 10 1119 2000 24277536 24276655 0.000000e+00 909.0
9 TraesCS2B01G071600 chr2A 92.683 82 6 0 2105 2186 24408338 24408419 5.280000e-23 119.0
10 TraesCS2B01G071600 chr2A 83.051 118 14 1 1859 1970 24178591 24178474 5.320000e-18 102.0
11 TraesCS2B01G071600 chr2D 92.693 1259 71 7 788 2026 22795505 22796762 0.000000e+00 1796.0
12 TraesCS2B01G071600 chr2D 95.122 82 4 0 2105 2186 22796851 22796932 2.440000e-26 130.0
13 TraesCS2B01G071600 chr5B 97.984 496 10 0 295 790 32053447 32053942 0.000000e+00 861.0
14 TraesCS2B01G071600 chr5B 93.952 496 29 1 295 789 394260780 394261275 0.000000e+00 749.0
15 TraesCS2B01G071600 chr7B 97.024 504 13 2 295 797 149933620 149933118 0.000000e+00 846.0
16 TraesCS2B01G071600 chr7B 93.952 496 29 1 295 789 645510770 645510275 0.000000e+00 749.0
17 TraesCS2B01G071600 chr7B 98.969 291 3 0 1 291 697359524 697359234 3.450000e-144 521.0
18 TraesCS2B01G071600 chr7B 98.966 290 3 0 1 290 286995362 286995651 1.240000e-143 520.0
19 TraesCS2B01G071600 chr6D 93.600 500 31 1 295 794 2104373 2104871 0.000000e+00 745.0
20 TraesCS2B01G071600 chr6D 92.453 53 3 1 2629 2680 391922497 391922445 1.160000e-09 75.0
21 TraesCS2B01G071600 chr5A 93.750 496 30 1 295 789 311015309 311014814 0.000000e+00 743.0
22 TraesCS2B01G071600 chr5A 97.966 295 5 1 1 295 149393538 149393831 7.460000e-141 510.0
23 TraesCS2B01G071600 chr5A 86.792 53 6 1 2625 2677 534629187 534629238 1.170000e-04 58.4
24 TraesCS2B01G071600 chr6B 92.944 496 33 2 295 789 471174753 471174259 0.000000e+00 721.0
25 TraesCS2B01G071600 chr6B 97.651 298 7 0 1 298 43845200 43844903 2.070000e-141 512.0
26 TraesCS2B01G071600 chr4A 92.540 496 36 1 295 789 699613652 699614147 0.000000e+00 710.0
27 TraesCS2B01G071600 chr4A 98.958 288 3 0 1 288 16029384 16029671 1.600000e-142 516.0
28 TraesCS2B01G071600 chr4A 92.857 42 3 0 2633 2674 3369510 3369551 9.030000e-06 62.1
29 TraesCS2B01G071600 chrUn 98.958 288 3 0 1 288 48519688 48519975 1.600000e-142 516.0
30 TraesCS2B01G071600 chrUn 97.651 298 7 0 1 298 399897151 399896854 2.070000e-141 512.0
31 TraesCS2B01G071600 chr7A 98.958 288 3 0 1 288 317173893 317174180 1.600000e-142 516.0
32 TraesCS2B01G071600 chr1A 98.958 288 3 0 1 288 413726449 413726162 1.600000e-142 516.0
33 TraesCS2B01G071600 chr5D 93.750 48 3 0 2635 2682 138465370 138465417 4.170000e-09 73.1
34 TraesCS2B01G071600 chr5D 89.362 47 5 0 2634 2680 335051240 335051194 3.250000e-05 60.2
35 TraesCS2B01G071600 chr4D 89.362 47 5 0 2634 2680 18695343 18695297 3.250000e-05 60.2
36 TraesCS2B01G071600 chr4B 89.362 47 5 0 2634 2680 30731083 30731037 3.250000e-05 60.2
37 TraesCS2B01G071600 chr1D 89.362 47 5 0 2631 2677 120537611 120537657 3.250000e-05 60.2
38 TraesCS2B01G071600 chr3B 88.235 51 3 2 2631 2680 59446055 59446007 1.170000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G071600 chr2B 38048100 38051116 3016 True 5572.0 5572 100.0000 1 3017 1 chr2B.!!$R1 3016
1 TraesCS2B01G071600 chr2B 38420561 38421868 1307 True 1871.0 1871 92.6630 794 2094 1 chr2B.!!$R2 1300
2 TraesCS2B01G071600 chr2B 39090028 39091254 1226 True 1711.0 1711 91.9350 794 2018 1 chr2B.!!$R3 1224
3 TraesCS2B01G071600 chr2B 39333275 39334287 1012 False 987.0 987 84.4880 991 2000 1 chr2B.!!$F1 1009
4 TraesCS2B01G071600 chr2B 39157984 39158986 1002 True 942.0 942 83.9760 998 1987 1 chr2B.!!$R4 989
5 TraesCS2B01G071600 chr2A 24407033 24408419 1386 False 964.5 1810 92.1560 791 2186 2 chr2A.!!$F1 1395
6 TraesCS2B01G071600 chr2A 24276655 24277536 881 True 909.0 909 85.4100 1119 2000 1 chr2A.!!$R1 881
7 TraesCS2B01G071600 chr2A 24178474 24181949 3475 True 533.5 965 83.7145 997 1989 2 chr2A.!!$R2 992
8 TraesCS2B01G071600 chr2D 22795505 22796932 1427 False 963.0 1796 93.9075 788 2186 2 chr2D.!!$F1 1398
9 TraesCS2B01G071600 chr7B 149933118 149933620 502 True 846.0 846 97.0240 295 797 1 chr7B.!!$R1 502

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
153 154 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.0 17.81 0.0 0.0 4.35 F
197 198 0.178990 GGAAACCAGCACAACCCTCT 60.179 55.0 0.00 0.0 0.0 3.69 F
930 945 0.267054 TGCCAGATCCATCCTCCTCT 59.733 55.0 0.00 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1200 1238 1.008995 GGCAAGCTTGAACGCGAAA 60.009 52.632 30.39 2.97 34.40 3.46 R
1842 1912 1.958715 CACAATCACCGTCGCCACA 60.959 57.895 0.00 0.00 0.00 4.17 R
2821 3964 0.038166 CTGTTACACCATGGGCAGGT 59.962 55.000 18.09 10.97 40.85 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.988598 CGCAGCAGTGGAACCGGT 62.989 66.667 0.00 0.00 37.80 5.28
28 29 3.357079 GCAGCAGTGGAACCGGTG 61.357 66.667 8.52 0.00 37.80 4.94
29 30 2.669569 CAGCAGTGGAACCGGTGG 60.670 66.667 8.52 0.00 37.80 4.61
30 31 3.168528 AGCAGTGGAACCGGTGGT 61.169 61.111 8.52 0.00 37.80 4.16
31 32 2.978010 GCAGTGGAACCGGTGGTG 60.978 66.667 8.52 2.41 37.80 4.17
32 33 2.281484 CAGTGGAACCGGTGGTGG 60.281 66.667 8.52 0.00 37.80 4.61
33 34 4.265056 AGTGGAACCGGTGGTGGC 62.265 66.667 8.52 0.00 37.80 5.01
117 118 4.895478 GCGGCGGTGCGGGTATTA 62.895 66.667 9.78 0.00 0.00 0.98
118 119 2.660552 CGGCGGTGCGGGTATTAG 60.661 66.667 0.00 0.00 0.00 1.73
119 120 2.280592 GGCGGTGCGGGTATTAGG 60.281 66.667 0.00 0.00 0.00 2.69
120 121 2.280592 GCGGTGCGGGTATTAGGG 60.281 66.667 0.00 0.00 0.00 3.53
121 122 3.097921 GCGGTGCGGGTATTAGGGT 62.098 63.158 0.00 0.00 0.00 4.34
122 123 1.523524 CGGTGCGGGTATTAGGGTT 59.476 57.895 0.00 0.00 0.00 4.11
123 124 0.107557 CGGTGCGGGTATTAGGGTTT 60.108 55.000 0.00 0.00 0.00 3.27
124 125 1.138661 CGGTGCGGGTATTAGGGTTTA 59.861 52.381 0.00 0.00 0.00 2.01
125 126 2.804212 CGGTGCGGGTATTAGGGTTTAG 60.804 54.545 0.00 0.00 0.00 1.85
126 127 2.435437 GGTGCGGGTATTAGGGTTTAGA 59.565 50.000 0.00 0.00 0.00 2.10
127 128 3.118298 GGTGCGGGTATTAGGGTTTAGAA 60.118 47.826 0.00 0.00 0.00 2.10
128 129 4.124970 GTGCGGGTATTAGGGTTTAGAAG 58.875 47.826 0.00 0.00 0.00 2.85
129 130 3.136763 GCGGGTATTAGGGTTTAGAAGC 58.863 50.000 0.00 0.00 0.00 3.86
130 131 3.387397 CGGGTATTAGGGTTTAGAAGCG 58.613 50.000 0.00 0.00 0.00 4.68
131 132 3.736720 GGGTATTAGGGTTTAGAAGCGG 58.263 50.000 0.00 0.00 0.00 5.52
132 133 3.389002 GGGTATTAGGGTTTAGAAGCGGA 59.611 47.826 0.00 0.00 0.00 5.54
133 134 4.141642 GGGTATTAGGGTTTAGAAGCGGAA 60.142 45.833 0.00 0.00 0.00 4.30
134 135 5.055144 GGTATTAGGGTTTAGAAGCGGAAG 58.945 45.833 0.00 0.00 0.00 3.46
148 149 2.033793 CGGAAGCGATCGTAACCTAG 57.966 55.000 17.81 2.69 0.00 3.02
149 150 1.768510 GGAAGCGATCGTAACCTAGC 58.231 55.000 17.81 0.00 0.00 3.42
150 151 1.396644 GAAGCGATCGTAACCTAGCG 58.603 55.000 17.81 0.00 0.00 4.26
151 152 0.737219 AAGCGATCGTAACCTAGCGT 59.263 50.000 17.81 0.00 0.00 5.07
152 153 0.029035 AGCGATCGTAACCTAGCGTG 59.971 55.000 17.81 0.00 0.00 5.34
153 154 0.028505 GCGATCGTAACCTAGCGTGA 59.971 55.000 17.81 0.00 0.00 4.35
154 155 1.334779 GCGATCGTAACCTAGCGTGAT 60.335 52.381 17.81 0.00 0.00 3.06
155 156 2.096069 GCGATCGTAACCTAGCGTGATA 60.096 50.000 17.81 0.00 0.00 2.15
156 157 3.477122 CGATCGTAACCTAGCGTGATAC 58.523 50.000 7.03 0.00 0.00 2.24
157 158 3.666374 CGATCGTAACCTAGCGTGATACC 60.666 52.174 7.03 0.00 0.00 2.73
158 159 2.642427 TCGTAACCTAGCGTGATACCA 58.358 47.619 0.00 0.00 0.00 3.25
159 160 3.216800 TCGTAACCTAGCGTGATACCAT 58.783 45.455 0.00 0.00 0.00 3.55
160 161 3.004002 TCGTAACCTAGCGTGATACCATG 59.996 47.826 0.00 0.00 0.00 3.66
161 162 3.243301 CGTAACCTAGCGTGATACCATGT 60.243 47.826 0.00 0.00 0.00 3.21
162 163 4.023792 CGTAACCTAGCGTGATACCATGTA 60.024 45.833 0.00 0.00 0.00 2.29
163 164 5.506151 CGTAACCTAGCGTGATACCATGTAA 60.506 44.000 0.00 0.00 0.00 2.41
164 165 4.585955 ACCTAGCGTGATACCATGTAAG 57.414 45.455 0.00 0.00 0.00 2.34
165 166 4.212716 ACCTAGCGTGATACCATGTAAGA 58.787 43.478 0.00 0.00 0.00 2.10
166 167 4.037684 ACCTAGCGTGATACCATGTAAGAC 59.962 45.833 0.00 0.00 0.00 3.01
167 168 4.037565 CCTAGCGTGATACCATGTAAGACA 59.962 45.833 0.00 0.00 0.00 3.41
168 169 4.465632 AGCGTGATACCATGTAAGACAA 57.534 40.909 0.00 0.00 0.00 3.18
169 170 5.023533 AGCGTGATACCATGTAAGACAAT 57.976 39.130 0.00 0.00 0.00 2.71
170 171 6.156748 AGCGTGATACCATGTAAGACAATA 57.843 37.500 0.00 0.00 0.00 1.90
171 172 6.578944 AGCGTGATACCATGTAAGACAATAA 58.421 36.000 0.00 0.00 0.00 1.40
172 173 6.701841 AGCGTGATACCATGTAAGACAATAAG 59.298 38.462 0.00 0.00 0.00 1.73
173 174 6.479001 GCGTGATACCATGTAAGACAATAAGT 59.521 38.462 0.00 0.00 0.00 2.24
174 175 7.011109 GCGTGATACCATGTAAGACAATAAGTT 59.989 37.037 0.00 0.00 0.00 2.66
175 176 8.879759 CGTGATACCATGTAAGACAATAAGTTT 58.120 33.333 0.00 0.00 0.00 2.66
179 180 7.227049 ACCATGTAAGACAATAAGTTTTGGG 57.773 36.000 0.00 0.00 0.00 4.12
180 181 7.007723 ACCATGTAAGACAATAAGTTTTGGGA 58.992 34.615 0.00 0.00 0.00 4.37
181 182 7.507616 ACCATGTAAGACAATAAGTTTTGGGAA 59.492 33.333 0.00 0.00 0.00 3.97
182 183 8.364142 CCATGTAAGACAATAAGTTTTGGGAAA 58.636 33.333 0.00 0.00 0.00 3.13
183 184 9.191995 CATGTAAGACAATAAGTTTTGGGAAAC 57.808 33.333 0.00 0.00 44.35 2.78
195 196 4.599036 GGAAACCAGCACAACCCT 57.401 55.556 0.00 0.00 0.00 4.34
196 197 2.341452 GGAAACCAGCACAACCCTC 58.659 57.895 0.00 0.00 0.00 4.30
197 198 0.178990 GGAAACCAGCACAACCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
198 199 1.073284 GGAAACCAGCACAACCCTCTA 59.927 52.381 0.00 0.00 0.00 2.43
199 200 2.427506 GAAACCAGCACAACCCTCTAG 58.572 52.381 0.00 0.00 0.00 2.43
200 201 0.693049 AACCAGCACAACCCTCTAGG 59.307 55.000 0.00 0.00 43.78 3.02
214 215 3.654273 CCTCTAGGGGTGGTTTATCTCA 58.346 50.000 0.00 0.00 0.00 3.27
215 216 4.235372 CCTCTAGGGGTGGTTTATCTCAT 58.765 47.826 0.00 0.00 0.00 2.90
216 217 4.660771 CCTCTAGGGGTGGTTTATCTCATT 59.339 45.833 0.00 0.00 0.00 2.57
217 218 5.844516 CCTCTAGGGGTGGTTTATCTCATTA 59.155 44.000 0.00 0.00 0.00 1.90
218 219 6.502158 CCTCTAGGGGTGGTTTATCTCATTAT 59.498 42.308 0.00 0.00 0.00 1.28
219 220 7.678598 CCTCTAGGGGTGGTTTATCTCATTATA 59.321 40.741 0.00 0.00 0.00 0.98
220 221 9.273137 CTCTAGGGGTGGTTTATCTCATTATAT 57.727 37.037 0.00 0.00 0.00 0.86
281 282 9.233649 ACATAGGTACAGAAGCTATACATAGTC 57.766 37.037 0.00 0.00 45.12 2.59
282 283 9.456147 CATAGGTACAGAAGCTATACATAGTCT 57.544 37.037 0.00 0.00 45.12 3.24
285 286 9.287373 AGGTACAGAAGCTATACATAGTCTAAC 57.713 37.037 0.00 0.00 32.98 2.34
286 287 9.064706 GGTACAGAAGCTATACATAGTCTAACA 57.935 37.037 0.00 0.00 32.96 2.41
287 288 9.881529 GTACAGAAGCTATACATAGTCTAACAC 57.118 37.037 0.00 0.00 32.96 3.32
288 289 8.754991 ACAGAAGCTATACATAGTCTAACACT 57.245 34.615 0.00 0.00 39.41 3.55
289 290 9.848710 ACAGAAGCTATACATAGTCTAACACTA 57.151 33.333 0.00 0.00 42.09 2.74
293 294 9.968870 AAGCTATACATAGTCTAACACTAAAGC 57.031 33.333 0.00 0.00 41.17 3.51
393 394 6.692486 AGAGAAAGCAGAGAACGAAATCTTA 58.308 36.000 0.00 0.00 0.00 2.10
467 468 7.967908 TGCTTGGTTTTTATATCCCTTTTCAA 58.032 30.769 0.00 0.00 0.00 2.69
506 507 7.489757 GCATTATCGACCAGGAATAGAGAATAC 59.510 40.741 0.00 0.00 0.00 1.89
610 611 7.231317 TCCTCCATCATAATGCAACCTTTATTC 59.769 37.037 0.00 0.00 0.00 1.75
703 704 7.870509 TCTTGAGAAATCAATGGACCTTATG 57.129 36.000 0.00 0.00 0.00 1.90
704 705 6.319658 TCTTGAGAAATCAATGGACCTTATGC 59.680 38.462 0.00 0.00 0.00 3.14
713 714 2.209758 TGGACCTTATGCCCACCATTA 58.790 47.619 0.00 0.00 35.34 1.90
716 717 4.223144 GGACCTTATGCCCACCATTAATT 58.777 43.478 0.00 0.00 35.34 1.40
753 754 6.071447 TGTCATTATTTACCTTTGCATGTGCT 60.071 34.615 6.55 0.00 42.66 4.40
765 766 3.752528 GCATGTGCTAGCAAGACGTGC 62.753 57.143 25.94 25.94 45.48 5.34
789 790 1.798813 GCACGTGCAAGCTTACTAGTT 59.201 47.619 34.52 0.00 41.59 2.24
792 793 4.084223 GCACGTGCAAGCTTACTAGTTTTA 60.084 41.667 34.52 0.00 41.59 1.52
866 881 5.504337 GCACGACACTGTGGTTAAAATACAA 60.504 40.000 13.09 0.00 40.26 2.41
877 892 6.151144 GTGGTTAAAATACAATGACAGCTCCT 59.849 38.462 0.00 0.00 0.00 3.69
930 945 0.267054 TGCCAGATCCATCCTCCTCT 59.733 55.000 0.00 0.00 0.00 3.69
932 947 1.899142 GCCAGATCCATCCTCCTCTAC 59.101 57.143 0.00 0.00 0.00 2.59
1170 1208 4.807631 TCCTCCGCCATCGTCCGA 62.808 66.667 0.00 0.00 0.00 4.55
1191 1229 2.682494 ACCGCCGCCTTCTTCCTA 60.682 61.111 0.00 0.00 0.00 2.94
1200 1238 1.004862 GCCTTCTTCCTAACCTGGCTT 59.995 52.381 0.00 0.00 36.32 4.35
1202 1240 3.767711 CCTTCTTCCTAACCTGGCTTTT 58.232 45.455 0.00 0.00 0.00 2.27
1215 1253 0.317854 GGCTTTTCGCGTTCAAGCTT 60.318 50.000 26.72 0.00 42.24 3.74
1582 1646 3.706373 GCGACTTCTGGGGCAGGA 61.706 66.667 0.00 0.00 31.51 3.86
1680 1744 2.360475 GTGCTGGCCACCTTCCTC 60.360 66.667 0.00 0.00 38.55 3.71
1956 2026 3.075005 GAGGAGTGGGCTGCCGTA 61.075 66.667 13.40 0.78 33.13 4.02
1989 2059 1.226859 CGACGCCGGCAGAAAGATA 60.227 57.895 28.98 0.00 0.00 1.98
2000 2073 4.374399 GGCAGAAAGATAAATGGCATTGG 58.626 43.478 14.47 0.00 38.07 3.16
2063 2665 5.104776 TCAGATTGATTGGGACTCTAACCAG 60.105 44.000 0.00 0.00 38.16 4.00
2066 2668 3.256704 TGATTGGGACTCTAACCAGGTT 58.743 45.455 10.50 10.50 38.16 3.50
2075 2677 5.370679 GACTCTAACCAGGTTACCAAACAA 58.629 41.667 8.09 0.00 37.34 2.83
2087 2689 5.405269 GGTTACCAAACAAGATTGCATTGTC 59.595 40.000 4.71 0.00 39.91 3.18
2088 2690 4.942761 ACCAAACAAGATTGCATTGTCT 57.057 36.364 4.71 0.00 39.91 3.41
2089 2691 5.280654 ACCAAACAAGATTGCATTGTCTT 57.719 34.783 4.71 4.47 39.91 3.01
2186 2788 9.566432 AAGTTTGAGAAGTGAGAAAGATGTAAT 57.434 29.630 0.00 0.00 0.00 1.89
2190 2792 9.862371 TTGAGAAGTGAGAAAGATGTAATACTC 57.138 33.333 0.00 0.00 0.00 2.59
2191 2793 8.470805 TGAGAAGTGAGAAAGATGTAATACTCC 58.529 37.037 0.00 0.00 0.00 3.85
2195 2797 6.377429 AGTGAGAAAGATGTAATACTCCGTCA 59.623 38.462 0.00 0.00 0.00 4.35
2196 2798 6.693545 GTGAGAAAGATGTAATACTCCGTCAG 59.306 42.308 0.00 0.00 0.00 3.51
2197 2799 5.593010 AGAAAGATGTAATACTCCGTCAGC 58.407 41.667 0.00 0.00 0.00 4.26
2198 2800 5.127194 AGAAAGATGTAATACTCCGTCAGCA 59.873 40.000 0.00 0.00 0.00 4.41
2199 2801 5.339008 AAGATGTAATACTCCGTCAGCAA 57.661 39.130 0.00 0.00 0.00 3.91
2200 2802 4.683832 AGATGTAATACTCCGTCAGCAAC 58.316 43.478 0.00 0.00 0.00 4.17
2201 2803 3.945981 TGTAATACTCCGTCAGCAACA 57.054 42.857 0.00 0.00 0.00 3.33
2202 2804 4.260139 TGTAATACTCCGTCAGCAACAA 57.740 40.909 0.00 0.00 0.00 2.83
2203 2805 3.991773 TGTAATACTCCGTCAGCAACAAC 59.008 43.478 0.00 0.00 0.00 3.32
2204 2806 3.402628 AATACTCCGTCAGCAACAACT 57.597 42.857 0.00 0.00 0.00 3.16
2207 2809 3.402628 ACTCCGTCAGCAACAACTAAT 57.597 42.857 0.00 0.00 0.00 1.73
2209 2811 5.086104 ACTCCGTCAGCAACAACTAATAT 57.914 39.130 0.00 0.00 0.00 1.28
2210 2812 5.109903 ACTCCGTCAGCAACAACTAATATC 58.890 41.667 0.00 0.00 0.00 1.63
2211 2813 5.079689 TCCGTCAGCAACAACTAATATCA 57.920 39.130 0.00 0.00 0.00 2.15
2212 2814 5.483811 TCCGTCAGCAACAACTAATATCAA 58.516 37.500 0.00 0.00 0.00 2.57
2213 2815 6.112734 TCCGTCAGCAACAACTAATATCAAT 58.887 36.000 0.00 0.00 0.00 2.57
2215 2817 7.766738 TCCGTCAGCAACAACTAATATCAATTA 59.233 33.333 0.00 0.00 0.00 1.40
2216 2818 8.394877 CCGTCAGCAACAACTAATATCAATTAA 58.605 33.333 0.00 0.00 0.00 1.40
2217 2819 9.935682 CGTCAGCAACAACTAATATCAATTAAT 57.064 29.630 0.00 0.00 0.00 1.40
2269 3235 8.528044 TTTGTGGGAAATATTATGTTAGGACC 57.472 34.615 0.00 0.00 0.00 4.46
2270 3236 7.214460 TGTGGGAAATATTATGTTAGGACCA 57.786 36.000 0.00 0.00 0.00 4.02
2271 3237 7.287061 TGTGGGAAATATTATGTTAGGACCAG 58.713 38.462 0.00 0.00 0.00 4.00
2273 3239 8.164070 GTGGGAAATATTATGTTAGGACCAGAT 58.836 37.037 0.00 0.00 0.00 2.90
2274 3240 8.163408 TGGGAAATATTATGTTAGGACCAGATG 58.837 37.037 0.00 0.00 0.00 2.90
2282 3248 8.555896 TTATGTTAGGACCAGATGTATAACCA 57.444 34.615 0.00 0.00 32.25 3.67
2283 3249 6.877668 TGTTAGGACCAGATGTATAACCAA 57.122 37.500 0.00 0.00 32.25 3.67
2284 3250 7.446106 TGTTAGGACCAGATGTATAACCAAT 57.554 36.000 0.00 0.00 32.25 3.16
2285 3251 7.506114 TGTTAGGACCAGATGTATAACCAATC 58.494 38.462 0.00 0.00 32.25 2.67
2286 3252 7.347222 TGTTAGGACCAGATGTATAACCAATCT 59.653 37.037 0.00 0.00 32.25 2.40
2287 3253 6.426646 AGGACCAGATGTATAACCAATCTC 57.573 41.667 0.00 0.00 0.00 2.75
2288 3254 6.146760 AGGACCAGATGTATAACCAATCTCT 58.853 40.000 0.00 0.00 0.00 3.10
2290 3256 7.789831 AGGACCAGATGTATAACCAATCTCTTA 59.210 37.037 0.00 0.00 0.00 2.10
2325 3291 9.685276 TTCATCCAATTATATGAAGTGTGAAGT 57.315 29.630 9.47 0.00 37.23 3.01
2326 3292 9.112725 TCATCCAATTATATGAAGTGTGAAGTG 57.887 33.333 0.56 0.00 0.00 3.16
2327 3293 8.896744 CATCCAATTATATGAAGTGTGAAGTGT 58.103 33.333 0.00 0.00 0.00 3.55
2328 3294 8.267620 TCCAATTATATGAAGTGTGAAGTGTG 57.732 34.615 0.00 0.00 0.00 3.82
2329 3295 8.100164 TCCAATTATATGAAGTGTGAAGTGTGA 58.900 33.333 0.00 0.00 0.00 3.58
2330 3296 8.729756 CCAATTATATGAAGTGTGAAGTGTGAA 58.270 33.333 0.00 0.00 0.00 3.18
2331 3297 9.764870 CAATTATATGAAGTGTGAAGTGTGAAG 57.235 33.333 0.00 0.00 0.00 3.02
2332 3298 9.507329 AATTATATGAAGTGTGAAGTGTGAAGT 57.493 29.630 0.00 0.00 0.00 3.01
2333 3299 6.791887 ATATGAAGTGTGAAGTGTGAAGTG 57.208 37.500 0.00 0.00 0.00 3.16
2334 3300 3.937814 TGAAGTGTGAAGTGTGAAGTGT 58.062 40.909 0.00 0.00 0.00 3.55
2335 3301 3.684305 TGAAGTGTGAAGTGTGAAGTGTG 59.316 43.478 0.00 0.00 0.00 3.82
2337 3303 3.262420 AGTGTGAAGTGTGAAGTGTGAC 58.738 45.455 0.00 0.00 0.00 3.67
2338 3304 2.351726 GTGTGAAGTGTGAAGTGTGACC 59.648 50.000 0.00 0.00 0.00 4.02
2339 3305 2.027653 TGTGAAGTGTGAAGTGTGACCA 60.028 45.455 0.00 0.00 0.00 4.02
2341 3307 2.027653 TGAAGTGTGAAGTGTGACCACA 60.028 45.455 0.00 0.00 44.39 4.17
2342 3308 3.206150 GAAGTGTGAAGTGTGACCACAT 58.794 45.455 6.10 0.00 44.39 3.21
2343 3309 2.564771 AGTGTGAAGTGTGACCACATG 58.435 47.619 6.10 0.00 44.39 3.21
2345 3311 2.287915 GTGTGAAGTGTGACCACATGAC 59.712 50.000 6.10 0.00 44.39 3.06
2346 3312 2.093235 TGTGAAGTGTGACCACATGACA 60.093 45.455 6.10 0.00 44.39 3.58
2347 3313 2.287915 GTGAAGTGTGACCACATGACAC 59.712 50.000 6.10 2.76 44.39 3.67
2348 3314 1.526887 GAAGTGTGACCACATGACACG 59.473 52.381 6.10 0.00 44.39 4.49
2349 3315 0.880278 AGTGTGACCACATGACACGC 60.880 55.000 6.10 10.51 44.39 5.34
2351 3317 1.954146 GTGACCACATGACACGCGT 60.954 57.895 5.58 5.58 0.00 6.01
2352 3318 1.953642 TGACCACATGACACGCGTG 60.954 57.895 35.99 35.99 39.48 5.34
2354 3320 2.664851 CCACATGACACGCGTGGT 60.665 61.111 39.21 25.78 44.27 4.16
2355 3321 1.373622 CCACATGACACGCGTGGTA 60.374 57.895 39.21 28.26 44.27 3.25
2357 3323 0.438445 CACATGACACGCGTGGTAAG 59.562 55.000 39.21 27.69 37.85 2.34
2358 3324 1.289109 ACATGACACGCGTGGTAAGC 61.289 55.000 39.21 23.33 37.85 3.09
2360 3326 0.601576 ATGACACGCGTGGTAAGCAA 60.602 50.000 39.21 18.36 34.19 3.91
2362 3328 0.094730 GACACGCGTGGTAAGCAATC 59.905 55.000 39.21 22.80 34.19 2.67
2363 3329 1.296056 ACACGCGTGGTAAGCAATCC 61.296 55.000 39.21 0.00 34.19 3.01
2364 3330 1.004320 ACGCGTGGTAAGCAATCCA 60.004 52.632 12.93 0.00 34.19 3.41
2365 3331 0.604243 ACGCGTGGTAAGCAATCCAA 60.604 50.000 12.93 0.00 35.38 3.53
2367 3333 1.727857 CGCGTGGTAAGCAATCCAAAC 60.728 52.381 0.00 0.00 35.38 2.93
2368 3334 1.539827 GCGTGGTAAGCAATCCAAACT 59.460 47.619 0.00 0.00 35.38 2.66
2369 3335 2.668279 GCGTGGTAAGCAATCCAAACTG 60.668 50.000 0.00 0.00 35.38 3.16
2373 3481 5.278071 CGTGGTAAGCAATCCAAACTGTTTA 60.278 40.000 5.31 0.00 35.38 2.01
2401 3509 7.907214 AAAAGACTATGTGGTATGAACAGTC 57.093 36.000 0.00 0.00 0.00 3.51
2402 3510 6.605471 AAGACTATGTGGTATGAACAGTCA 57.395 37.500 0.00 0.00 38.41 3.41
2403 3511 6.605471 AGACTATGTGGTATGAACAGTCAA 57.395 37.500 0.00 0.00 37.30 3.18
2405 3513 7.450074 AGACTATGTGGTATGAACAGTCAAAA 58.550 34.615 0.00 0.00 37.30 2.44
2406 3514 8.103305 AGACTATGTGGTATGAACAGTCAAAAT 58.897 33.333 0.00 0.00 37.30 1.82
2407 3515 8.268850 ACTATGTGGTATGAACAGTCAAAATC 57.731 34.615 0.00 0.00 37.30 2.17
2409 3517 5.301555 TGTGGTATGAACAGTCAAAATCGA 58.698 37.500 0.00 0.00 37.30 3.59
2410 3518 5.937540 TGTGGTATGAACAGTCAAAATCGAT 59.062 36.000 0.00 0.00 37.30 3.59
2413 3521 7.807907 GTGGTATGAACAGTCAAAATCGATTTT 59.192 33.333 26.51 26.51 40.37 1.82
2414 3522 8.020819 TGGTATGAACAGTCAAAATCGATTTTC 58.979 33.333 28.70 19.94 37.86 2.29
2415 3523 8.020819 GGTATGAACAGTCAAAATCGATTTTCA 58.979 33.333 28.70 22.33 37.86 2.69
2417 3525 8.870160 ATGAACAGTCAAAATCGATTTTCAAA 57.130 26.923 28.70 16.56 37.86 2.69
2418 3526 8.338985 TGAACAGTCAAAATCGATTTTCAAAG 57.661 30.769 28.70 21.09 37.86 2.77
2423 3531 9.623687 CAGTCAAAATCGATTTTCAAAGTTTTC 57.376 29.630 28.70 6.97 37.86 2.29
2424 3532 9.364989 AGTCAAAATCGATTTTCAAAGTTTTCA 57.635 25.926 28.70 3.71 37.86 2.69
2425 3533 9.408731 GTCAAAATCGATTTTCAAAGTTTTCAC 57.591 29.630 28.70 10.89 37.86 3.18
2426 3534 9.144747 TCAAAATCGATTTTCAAAGTTTTCACA 57.855 25.926 28.70 2.49 37.86 3.58
2428 3536 9.919348 AAAATCGATTTTCAAAGTTTTCACATG 57.081 25.926 26.51 0.00 35.18 3.21
2430 3538 6.272318 TCGATTTTCAAAGTTTTCACATGCT 58.728 32.000 0.00 0.00 0.00 3.79
2433 3541 8.538856 CGATTTTCAAAGTTTTCACATGCTAAA 58.461 29.630 0.00 0.00 0.00 1.85
2434 3542 9.636965 GATTTTCAAAGTTTTCACATGCTAAAC 57.363 29.630 8.91 8.91 33.16 2.01
2435 3543 7.532682 TTTCAAAGTTTTCACATGCTAAACC 57.467 32.000 11.90 0.00 33.38 3.27
2438 3546 6.700960 TCAAAGTTTTCACATGCTAAACCATG 59.299 34.615 11.90 11.28 46.19 3.66
2445 3553 3.530265 CATGCTAAACCATGTGGCAAT 57.470 42.857 0.00 0.00 38.19 3.56
2449 3557 4.849518 TGCTAAACCATGTGGCAATAGTA 58.150 39.130 0.00 0.00 39.32 1.82
2450 3558 5.445069 TGCTAAACCATGTGGCAATAGTAT 58.555 37.500 0.00 0.00 39.32 2.12
2452 3560 5.530915 GCTAAACCATGTGGCAATAGTATCA 59.469 40.000 0.00 0.00 39.32 2.15
2454 3562 6.455360 AAACCATGTGGCAATAGTATCAAG 57.545 37.500 0.00 0.00 39.32 3.02
2455 3563 3.885297 ACCATGTGGCAATAGTATCAAGC 59.115 43.478 0.00 0.00 39.32 4.01
2458 3566 5.163530 CCATGTGGCAATAGTATCAAGCAAA 60.164 40.000 0.00 0.00 0.00 3.68
2461 3569 5.067674 TGTGGCAATAGTATCAAGCAAATCC 59.932 40.000 0.00 0.00 0.00 3.01
2462 3570 5.067674 GTGGCAATAGTATCAAGCAAATCCA 59.932 40.000 0.00 0.00 0.00 3.41
2463 3571 5.655974 TGGCAATAGTATCAAGCAAATCCAA 59.344 36.000 0.00 0.00 0.00 3.53
2466 3574 6.197096 GCAATAGTATCAAGCAAATCCAAACG 59.803 38.462 0.00 0.00 0.00 3.60
2471 3614 2.036992 TCAAGCAAATCCAAACGCCATT 59.963 40.909 0.00 0.00 0.00 3.16
2475 3618 4.636249 AGCAAATCCAAACGCCATTTTAA 58.364 34.783 0.00 0.00 0.00 1.52
2476 3619 4.450757 AGCAAATCCAAACGCCATTTTAAC 59.549 37.500 0.00 0.00 0.00 2.01
2477 3620 4.665394 GCAAATCCAAACGCCATTTTAACG 60.665 41.667 0.00 0.00 0.00 3.18
2480 3623 1.982913 CCAAACGCCATTTTAACGCTC 59.017 47.619 0.00 0.00 0.00 5.03
2481 3624 1.982913 CAAACGCCATTTTAACGCTCC 59.017 47.619 0.00 0.00 0.00 4.70
2484 3627 1.816224 ACGCCATTTTAACGCTCCAAT 59.184 42.857 0.00 0.00 0.00 3.16
2486 3629 3.249917 CGCCATTTTAACGCTCCAATTT 58.750 40.909 0.00 0.00 0.00 1.82
2490 3633 5.408299 GCCATTTTAACGCTCCAATTTCTTT 59.592 36.000 0.00 0.00 0.00 2.52
2491 3634 6.401047 GCCATTTTAACGCTCCAATTTCTTTC 60.401 38.462 0.00 0.00 0.00 2.62
2492 3635 6.090763 CCATTTTAACGCTCCAATTTCTTTCC 59.909 38.462 0.00 0.00 0.00 3.13
2493 3636 4.776795 TTAACGCTCCAATTTCTTTCCC 57.223 40.909 0.00 0.00 0.00 3.97
2494 3637 2.586648 ACGCTCCAATTTCTTTCCCT 57.413 45.000 0.00 0.00 0.00 4.20
2497 3640 2.819608 CGCTCCAATTTCTTTCCCTTCA 59.180 45.455 0.00 0.00 0.00 3.02
2500 3643 5.010282 GCTCCAATTTCTTTCCCTTCACTA 58.990 41.667 0.00 0.00 0.00 2.74
2501 3644 5.654209 GCTCCAATTTCTTTCCCTTCACTAT 59.346 40.000 0.00 0.00 0.00 2.12
2511 3654 8.752005 TCTTTCCCTTCACTATTTTCATATGG 57.248 34.615 2.13 0.00 0.00 2.74
2512 3655 7.779798 TCTTTCCCTTCACTATTTTCATATGGG 59.220 37.037 2.13 0.00 0.00 4.00
2513 3656 5.952387 TCCCTTCACTATTTTCATATGGGG 58.048 41.667 2.13 1.04 0.00 4.96
2514 3657 5.435041 TCCCTTCACTATTTTCATATGGGGT 59.565 40.000 2.13 0.00 0.00 4.95
2515 3658 6.068498 TCCCTTCACTATTTTCATATGGGGTT 60.068 38.462 2.13 0.00 0.00 4.11
2516 3659 6.040842 CCCTTCACTATTTTCATATGGGGTTG 59.959 42.308 2.13 0.00 0.00 3.77
2517 3660 6.040842 CCTTCACTATTTTCATATGGGGTTGG 59.959 42.308 2.13 0.00 0.00 3.77
2518 3661 6.334378 TCACTATTTTCATATGGGGTTGGA 57.666 37.500 2.13 0.00 0.00 3.53
2519 3662 6.126409 TCACTATTTTCATATGGGGTTGGAC 58.874 40.000 2.13 0.00 0.00 4.02
2520 3663 6.069088 TCACTATTTTCATATGGGGTTGGACT 60.069 38.462 2.13 0.00 0.00 3.85
2521 3664 6.039717 CACTATTTTCATATGGGGTTGGACTG 59.960 42.308 2.13 0.00 0.00 3.51
2522 3665 4.396357 TTTTCATATGGGGTTGGACTGT 57.604 40.909 2.13 0.00 0.00 3.55
2524 3667 5.725551 TTTCATATGGGGTTGGACTGTAT 57.274 39.130 2.13 0.00 0.00 2.29
2525 3668 4.974645 TCATATGGGGTTGGACTGTATC 57.025 45.455 2.13 0.00 0.00 2.24
2526 3669 4.302930 TCATATGGGGTTGGACTGTATCA 58.697 43.478 2.13 0.00 0.00 2.15
2528 3671 3.582998 ATGGGGTTGGACTGTATCATG 57.417 47.619 0.00 0.00 0.00 3.07
2530 3673 3.122480 TGGGGTTGGACTGTATCATGAT 58.878 45.455 13.81 13.81 0.00 2.45
2532 3675 4.017591 TGGGGTTGGACTGTATCATGATTT 60.018 41.667 14.65 0.00 0.00 2.17
2533 3676 4.339247 GGGGTTGGACTGTATCATGATTTG 59.661 45.833 14.65 7.08 0.00 2.32
2534 3677 5.192927 GGGTTGGACTGTATCATGATTTGA 58.807 41.667 14.65 0.00 39.12 2.69
2536 3679 6.322201 GGGTTGGACTGTATCATGATTTGATT 59.678 38.462 14.65 0.00 42.62 2.57
2537 3680 7.198390 GGTTGGACTGTATCATGATTTGATTG 58.802 38.462 14.65 1.92 42.62 2.67
2538 3681 6.947644 TGGACTGTATCATGATTTGATTGG 57.052 37.500 14.65 0.93 42.62 3.16
2539 3682 6.425735 TGGACTGTATCATGATTTGATTGGT 58.574 36.000 14.65 4.01 42.62 3.67
2540 3683 7.572814 TGGACTGTATCATGATTTGATTGGTA 58.427 34.615 14.65 0.00 42.62 3.25
2543 3686 9.276590 GACTGTATCATGATTTGATTGGTATCA 57.723 33.333 14.65 0.00 42.62 2.15
2544 3687 9.631257 ACTGTATCATGATTTGATTGGTATCAA 57.369 29.630 14.65 0.00 46.38 2.57
2586 3729 6.090088 TGTTTGGTAAATAAAATGATGTGCGC 59.910 34.615 0.00 0.00 0.00 6.09
2587 3730 5.574891 TGGTAAATAAAATGATGTGCGCT 57.425 34.783 9.73 0.00 0.00 5.92
2588 3731 5.960113 TGGTAAATAAAATGATGTGCGCTT 58.040 33.333 9.73 0.00 0.00 4.68
2589 3732 6.393990 TGGTAAATAAAATGATGTGCGCTTT 58.606 32.000 9.73 0.80 0.00 3.51
2590 3733 6.309980 TGGTAAATAAAATGATGTGCGCTTTG 59.690 34.615 9.73 0.00 0.00 2.77
2591 3734 5.783100 AAATAAAATGATGTGCGCTTTGG 57.217 34.783 9.73 0.00 0.00 3.28
2592 3735 2.818130 AAAATGATGTGCGCTTTGGT 57.182 40.000 9.73 0.00 0.00 3.67
2593 3736 2.818130 AAATGATGTGCGCTTTGGTT 57.182 40.000 9.73 0.00 0.00 3.67
2594 3737 3.932545 AAATGATGTGCGCTTTGGTTA 57.067 38.095 9.73 0.00 0.00 2.85
2595 3738 4.454728 AAATGATGTGCGCTTTGGTTAT 57.545 36.364 9.73 0.00 0.00 1.89
2596 3739 4.454728 AATGATGTGCGCTTTGGTTATT 57.545 36.364 9.73 0.00 0.00 1.40
2597 3740 3.932545 TGATGTGCGCTTTGGTTATTT 57.067 38.095 9.73 0.00 0.00 1.40
2598 3741 3.573598 TGATGTGCGCTTTGGTTATTTG 58.426 40.909 9.73 0.00 0.00 2.32
2599 3742 3.005261 TGATGTGCGCTTTGGTTATTTGT 59.995 39.130 9.73 0.00 0.00 2.83
2601 3744 4.775058 TGTGCGCTTTGGTTATTTGTAT 57.225 36.364 9.73 0.00 0.00 2.29
2602 3745 4.480541 TGTGCGCTTTGGTTATTTGTATG 58.519 39.130 9.73 0.00 0.00 2.39
2603 3746 4.022762 TGTGCGCTTTGGTTATTTGTATGT 60.023 37.500 9.73 0.00 0.00 2.29
2604 3747 4.920927 GTGCGCTTTGGTTATTTGTATGTT 59.079 37.500 9.73 0.00 0.00 2.71
2605 3748 6.087522 GTGCGCTTTGGTTATTTGTATGTTA 58.912 36.000 9.73 0.00 0.00 2.41
2606 3749 6.250527 GTGCGCTTTGGTTATTTGTATGTTAG 59.749 38.462 9.73 0.00 0.00 2.34
2607 3750 6.072397 TGCGCTTTGGTTATTTGTATGTTAGT 60.072 34.615 9.73 0.00 0.00 2.24
2608 3751 6.468000 GCGCTTTGGTTATTTGTATGTTAGTC 59.532 38.462 0.00 0.00 0.00 2.59
2610 3753 8.181573 CGCTTTGGTTATTTGTATGTTAGTCAT 58.818 33.333 0.00 0.00 40.25 3.06
2623 3766 9.408648 TGTATGTTAGTCATAGAGTCTTCATCA 57.591 33.333 0.00 0.00 39.36 3.07
2624 3767 9.672086 GTATGTTAGTCATAGAGTCTTCATCAC 57.328 37.037 0.00 0.00 39.36 3.06
2625 3768 7.946381 TGTTAGTCATAGAGTCTTCATCACT 57.054 36.000 0.00 0.00 0.00 3.41
2626 3769 8.354711 TGTTAGTCATAGAGTCTTCATCACTT 57.645 34.615 0.00 0.00 0.00 3.16
2628 3771 6.849085 AGTCATAGAGTCTTCATCACTTGT 57.151 37.500 0.00 0.00 0.00 3.16
2630 3773 8.532186 AGTCATAGAGTCTTCATCACTTGTAT 57.468 34.615 0.00 0.00 0.00 2.29
2631 3774 8.976353 AGTCATAGAGTCTTCATCACTTGTATT 58.024 33.333 0.00 0.00 0.00 1.89
2659 3802 9.893305 AATACTTCCTTCGTTTCAAAATAAGTG 57.107 29.630 0.00 0.00 0.00 3.16
2660 3803 7.329588 ACTTCCTTCGTTTCAAAATAAGTGT 57.670 32.000 0.00 0.00 0.00 3.55
2662 3805 5.981174 TCCTTCGTTTCAAAATAAGTGTCG 58.019 37.500 0.00 0.00 0.00 4.35
2663 3806 5.524646 TCCTTCGTTTCAAAATAAGTGTCGT 59.475 36.000 0.00 0.00 0.00 4.34
2664 3807 6.037391 TCCTTCGTTTCAAAATAAGTGTCGTT 59.963 34.615 0.00 0.00 0.00 3.85
2667 3810 6.950545 TCGTTTCAAAATAAGTGTCGTTGAT 58.049 32.000 0.00 0.00 0.00 2.57
2670 3813 9.160576 CGTTTCAAAATAAGTGTCGTTGATTTA 57.839 29.630 0.00 0.00 0.00 1.40
2678 3821 9.485206 AATAAGTGTCGTTGATTTAGTACAAGT 57.515 29.630 0.00 0.00 0.00 3.16
2679 3822 7.781548 AAGTGTCGTTGATTTAGTACAAGTT 57.218 32.000 0.00 0.00 0.00 2.66
2682 3825 7.656137 AGTGTCGTTGATTTAGTACAAGTTCAT 59.344 33.333 0.00 0.00 0.00 2.57
2684 3827 8.279800 TGTCGTTGATTTAGTACAAGTTCATTG 58.720 33.333 0.00 0.00 45.01 2.82
2700 3843 8.820933 CAAGTTCATTGTGATATTCATCGTACT 58.179 33.333 0.00 0.00 33.51 2.73
2718 3861 9.955208 CATCGTACTATATGGTAACTTGTTACA 57.045 33.333 20.70 10.51 37.61 2.41
2720 3863 9.787532 TCGTACTATATGGTAACTTGTTACAAC 57.212 33.333 20.70 8.72 37.61 3.32
2721 3864 9.571810 CGTACTATATGGTAACTTGTTACAACA 57.428 33.333 20.70 12.97 37.08 3.33
2790 3933 8.798748 ATAGTGTAGTTATCATGTTCGTTAGC 57.201 34.615 0.00 0.00 0.00 3.09
2791 3934 6.627243 AGTGTAGTTATCATGTTCGTTAGCA 58.373 36.000 0.00 0.00 0.00 3.49
2792 3935 7.265673 AGTGTAGTTATCATGTTCGTTAGCAT 58.734 34.615 0.00 0.00 0.00 3.79
2793 3936 7.764443 AGTGTAGTTATCATGTTCGTTAGCATT 59.236 33.333 0.00 0.00 0.00 3.56
2794 3937 9.027129 GTGTAGTTATCATGTTCGTTAGCATTA 57.973 33.333 0.00 0.00 0.00 1.90
2795 3938 9.244799 TGTAGTTATCATGTTCGTTAGCATTAG 57.755 33.333 0.00 0.00 0.00 1.73
2796 3939 9.245962 GTAGTTATCATGTTCGTTAGCATTAGT 57.754 33.333 0.00 0.00 0.00 2.24
2797 3940 8.354011 AGTTATCATGTTCGTTAGCATTAGTC 57.646 34.615 0.00 0.00 0.00 2.59
2798 3941 7.979537 AGTTATCATGTTCGTTAGCATTAGTCA 59.020 33.333 0.00 0.00 0.00 3.41
2799 3942 6.589830 ATCATGTTCGTTAGCATTAGTCAC 57.410 37.500 0.00 0.00 0.00 3.67
2800 3943 4.868171 TCATGTTCGTTAGCATTAGTCACC 59.132 41.667 0.00 0.00 0.00 4.02
2801 3944 3.247442 TGTTCGTTAGCATTAGTCACCG 58.753 45.455 0.00 0.00 0.00 4.94
2802 3945 1.917273 TCGTTAGCATTAGTCACCGC 58.083 50.000 0.00 0.00 0.00 5.68
2803 3946 0.928229 CGTTAGCATTAGTCACCGCC 59.072 55.000 0.00 0.00 0.00 6.13
2804 3947 1.737696 CGTTAGCATTAGTCACCGCCA 60.738 52.381 0.00 0.00 0.00 5.69
2805 3948 2.561569 GTTAGCATTAGTCACCGCCAT 58.438 47.619 0.00 0.00 0.00 4.40
2806 3949 2.238942 TAGCATTAGTCACCGCCATG 57.761 50.000 0.00 0.00 0.00 3.66
2807 3950 0.464373 AGCATTAGTCACCGCCATGG 60.464 55.000 7.63 7.63 46.41 3.66
2816 3959 2.597217 CCGCCATGGTGGTTGTGT 60.597 61.111 32.70 0.00 40.46 3.72
2817 3960 1.302913 CCGCCATGGTGGTTGTGTA 60.303 57.895 32.70 0.00 40.46 2.90
2818 3961 1.582610 CCGCCATGGTGGTTGTGTAC 61.583 60.000 32.70 2.38 40.46 2.90
2819 3962 0.605319 CGCCATGGTGGTTGTGTACT 60.605 55.000 18.06 0.00 40.46 2.73
2820 3963 1.616159 GCCATGGTGGTTGTGTACTT 58.384 50.000 14.67 0.00 40.46 2.24
2821 3964 2.785562 GCCATGGTGGTTGTGTACTTA 58.214 47.619 14.67 0.00 40.46 2.24
2822 3965 2.486592 GCCATGGTGGTTGTGTACTTAC 59.513 50.000 14.67 0.00 40.46 2.34
2823 3966 3.078837 CCATGGTGGTTGTGTACTTACC 58.921 50.000 2.57 0.00 35.72 2.85
2824 3967 3.244770 CCATGGTGGTTGTGTACTTACCT 60.245 47.826 2.57 0.00 35.97 3.08
2825 3968 3.478857 TGGTGGTTGTGTACTTACCTG 57.521 47.619 11.23 0.00 35.97 4.00
2826 3969 2.148768 GGTGGTTGTGTACTTACCTGC 58.851 52.381 11.23 6.01 33.78 4.85
2827 3970 2.148768 GTGGTTGTGTACTTACCTGCC 58.851 52.381 11.23 0.00 33.05 4.85
2828 3971 1.072648 TGGTTGTGTACTTACCTGCCC 59.927 52.381 11.23 0.00 33.05 5.36
2829 3972 1.072648 GGTTGTGTACTTACCTGCCCA 59.927 52.381 0.00 0.00 0.00 5.36
2830 3973 2.290705 GGTTGTGTACTTACCTGCCCAT 60.291 50.000 0.00 0.00 0.00 4.00
2831 3974 2.747446 GTTGTGTACTTACCTGCCCATG 59.253 50.000 0.00 0.00 0.00 3.66
2832 3975 1.280710 TGTGTACTTACCTGCCCATGG 59.719 52.381 4.14 4.14 0.00 3.66
2833 3976 1.280998 GTGTACTTACCTGCCCATGGT 59.719 52.381 11.73 0.00 41.28 3.55
2834 3977 1.280710 TGTACTTACCTGCCCATGGTG 59.719 52.381 11.73 3.26 38.42 4.17
2835 3978 1.280998 GTACTTACCTGCCCATGGTGT 59.719 52.381 11.73 4.91 38.42 4.16
2836 3979 1.663911 ACTTACCTGCCCATGGTGTA 58.336 50.000 11.73 3.91 38.42 2.90
2837 3980 1.989586 ACTTACCTGCCCATGGTGTAA 59.010 47.619 11.73 11.21 38.42 2.41
2838 3981 2.290705 ACTTACCTGCCCATGGTGTAAC 60.291 50.000 11.73 0.00 38.42 2.50
2839 3982 1.363246 TACCTGCCCATGGTGTAACA 58.637 50.000 11.73 0.00 39.98 2.41
2840 3983 0.038166 ACCTGCCCATGGTGTAACAG 59.962 55.000 11.73 9.59 39.98 3.16
2841 3984 0.038166 CCTGCCCATGGTGTAACAGT 59.962 55.000 11.73 0.00 39.98 3.55
2842 3985 1.547675 CCTGCCCATGGTGTAACAGTT 60.548 52.381 11.73 0.00 39.98 3.16
2843 3986 1.541147 CTGCCCATGGTGTAACAGTTG 59.459 52.381 11.73 0.00 39.98 3.16
2844 3987 0.243636 GCCCATGGTGTAACAGTTGC 59.756 55.000 11.73 0.00 39.98 4.17
2845 3988 0.887933 CCCATGGTGTAACAGTTGCC 59.112 55.000 11.73 0.00 39.98 4.52
2846 3989 1.614996 CCATGGTGTAACAGTTGCCA 58.385 50.000 2.57 8.05 39.98 4.92
2847 3990 1.269448 CCATGGTGTAACAGTTGCCAC 59.731 52.381 2.57 8.26 39.98 5.01
2848 3991 2.229792 CATGGTGTAACAGTTGCCACT 58.770 47.619 14.26 0.00 39.98 4.00
2866 4009 1.977854 ACTGTGGTGGCAGTTATCAGA 59.022 47.619 10.47 0.00 46.45 3.27
2867 4010 2.573462 ACTGTGGTGGCAGTTATCAGAT 59.427 45.455 10.47 0.00 46.45 2.90
2869 4012 4.225042 ACTGTGGTGGCAGTTATCAGATTA 59.775 41.667 10.47 0.00 46.45 1.75
2873 4016 5.008019 GTGGTGGCAGTTATCAGATTATGTG 59.992 44.000 0.00 0.00 0.00 3.21
2875 4018 5.822519 GGTGGCAGTTATCAGATTATGTGAA 59.177 40.000 0.00 0.00 0.00 3.18
2877 4020 7.148086 GGTGGCAGTTATCAGATTATGTGAAAA 60.148 37.037 0.00 0.00 0.00 2.29
2878 4021 8.243426 GTGGCAGTTATCAGATTATGTGAAAAA 58.757 33.333 0.00 0.00 0.00 1.94
2879 4022 8.970020 TGGCAGTTATCAGATTATGTGAAAAAT 58.030 29.630 0.00 0.00 0.00 1.82
2896 4039 9.703892 TGTGAAAAATTGTTAAACCATAGGATG 57.296 29.630 0.00 0.00 0.00 3.51
2897 4040 9.921637 GTGAAAAATTGTTAAACCATAGGATGA 57.078 29.630 0.00 0.00 0.00 2.92
2899 4042 9.921637 GAAAAATTGTTAAACCATAGGATGACA 57.078 29.630 0.00 0.00 0.00 3.58
2901 4044 9.705290 AAAATTGTTAAACCATAGGATGACAAC 57.295 29.630 0.00 0.00 30.33 3.32
2902 4045 8.650143 AATTGTTAAACCATAGGATGACAACT 57.350 30.769 0.00 0.00 30.33 3.16
2904 4047 8.556213 TTGTTAAACCATAGGATGACAACTAC 57.444 34.615 0.00 0.00 0.00 2.73
2906 4049 9.038072 TGTTAAACCATAGGATGACAACTACTA 57.962 33.333 0.00 0.00 0.00 1.82
2908 4051 7.735326 AAACCATAGGATGACAACTACTACT 57.265 36.000 0.00 0.00 0.00 2.57
2910 4053 7.113658 ACCATAGGATGACAACTACTACTTG 57.886 40.000 0.00 0.00 0.00 3.16
2913 4056 7.014326 CCATAGGATGACAACTACTACTTGCTA 59.986 40.741 0.00 0.00 0.00 3.49
2914 4057 8.580720 CATAGGATGACAACTACTACTTGCTAT 58.419 37.037 0.00 0.00 0.00 2.97
2915 4058 6.810911 AGGATGACAACTACTACTTGCTATG 58.189 40.000 0.00 0.00 0.00 2.23
2916 4059 6.381420 AGGATGACAACTACTACTTGCTATGT 59.619 38.462 0.00 0.00 0.00 2.29
2917 4060 7.042335 GGATGACAACTACTACTTGCTATGTT 58.958 38.462 0.00 0.00 0.00 2.71
2920 4063 7.214381 TGACAACTACTACTTGCTATGTTGTT 58.786 34.615 9.43 0.00 43.96 2.83
2922 4065 8.084590 ACAACTACTACTTGCTATGTTGTTTC 57.915 34.615 0.00 0.00 42.17 2.78
2923 4066 6.946229 ACTACTACTTGCTATGTTGTTTCG 57.054 37.500 0.00 0.00 0.00 3.46
2924 4067 6.684686 ACTACTACTTGCTATGTTGTTTCGA 58.315 36.000 0.00 0.00 0.00 3.71
2925 4068 7.149973 ACTACTACTTGCTATGTTGTTTCGAA 58.850 34.615 0.00 0.00 0.00 3.71
2926 4069 6.854496 ACTACTTGCTATGTTGTTTCGAAA 57.146 33.333 6.47 6.47 0.00 3.46
2927 4070 7.435068 ACTACTTGCTATGTTGTTTCGAAAT 57.565 32.000 14.69 0.00 0.00 2.17
2928 4071 7.871853 ACTACTTGCTATGTTGTTTCGAAATT 58.128 30.769 14.69 0.25 0.00 1.82
2929 4072 6.991485 ACTTGCTATGTTGTTTCGAAATTG 57.009 33.333 14.69 0.00 0.00 2.32
2930 4073 5.402270 ACTTGCTATGTTGTTTCGAAATTGC 59.598 36.000 14.69 10.44 0.00 3.56
2931 4074 5.119931 TGCTATGTTGTTTCGAAATTGCT 57.880 34.783 14.69 1.45 0.00 3.91
2932 4075 5.527951 TGCTATGTTGTTTCGAAATTGCTT 58.472 33.333 14.69 7.76 0.00 3.91
2933 4076 6.673106 TGCTATGTTGTTTCGAAATTGCTTA 58.327 32.000 14.69 8.40 0.00 3.09
2934 4077 6.801377 TGCTATGTTGTTTCGAAATTGCTTAG 59.199 34.615 14.69 16.39 0.00 2.18
2935 4078 7.021196 GCTATGTTGTTTCGAAATTGCTTAGA 58.979 34.615 14.69 0.00 0.00 2.10
2939 4082 7.199766 TGTTGTTTCGAAATTGCTTAGACAAT 58.800 30.769 14.69 0.00 42.01 2.71
2940 4083 8.346300 TGTTGTTTCGAAATTGCTTAGACAATA 58.654 29.630 14.69 6.41 39.32 1.90
2942 4085 9.906660 TTGTTTCGAAATTGCTTAGACAATAAT 57.093 25.926 14.69 0.00 39.32 1.28
2943 4086 9.906660 TGTTTCGAAATTGCTTAGACAATAATT 57.093 25.926 14.69 0.00 39.32 1.40
2969 4112 6.768861 ACAATTGTAGTGGTGTTTAGTTAGCA 59.231 34.615 9.97 0.00 0.00 3.49
2971 4114 7.611213 ATTGTAGTGGTGTTTAGTTAGCATC 57.389 36.000 0.00 0.00 0.00 3.91
2972 4115 5.165676 TGTAGTGGTGTTTAGTTAGCATCG 58.834 41.667 0.00 0.00 0.00 3.84
2973 4116 3.000727 AGTGGTGTTTAGTTAGCATCGC 58.999 45.455 0.00 0.00 0.00 4.58
2974 4117 1.996898 TGGTGTTTAGTTAGCATCGCG 59.003 47.619 0.00 0.00 0.00 5.87
2975 4118 2.264813 GGTGTTTAGTTAGCATCGCGA 58.735 47.619 13.09 13.09 0.00 5.87
2976 4119 2.864343 GGTGTTTAGTTAGCATCGCGAT 59.136 45.455 17.62 17.62 0.00 4.58
2977 4120 3.302480 GGTGTTTAGTTAGCATCGCGATG 60.302 47.826 38.15 38.15 41.60 3.84
2978 4121 3.550275 GTGTTTAGTTAGCATCGCGATGA 59.450 43.478 44.20 26.81 41.20 2.92
2991 4134 5.929697 ATCGCGATGATGTATCAACAATT 57.070 34.783 23.04 0.00 40.69 2.32
2995 4138 5.561499 CGCGATGATGTATCAACAATTAAGC 59.439 40.000 0.00 0.00 40.69 3.09
2998 4141 7.513132 CGATGATGTATCAACAATTAAGCGAT 58.487 34.615 0.00 0.00 40.69 4.58
2999 4142 7.476492 CGATGATGTATCAACAATTAAGCGATG 59.524 37.037 0.00 0.00 40.69 3.84
3001 4144 8.655651 TGATGTATCAACAATTAAGCGATGTA 57.344 30.769 0.00 0.00 39.58 2.29
3002 4145 8.764287 TGATGTATCAACAATTAAGCGATGTAG 58.236 33.333 0.00 0.00 39.58 2.74
3008 4151 7.745015 TCAACAATTAAGCGATGTAGTTAACC 58.255 34.615 0.88 0.00 0.00 2.85
3011 4154 5.625568 ATTAAGCGATGTAGTTAACCCCT 57.374 39.130 0.88 0.00 0.00 4.79
3012 4155 2.981859 AGCGATGTAGTTAACCCCTG 57.018 50.000 0.88 0.00 0.00 4.45
3013 4156 2.185387 AGCGATGTAGTTAACCCCTGT 58.815 47.619 0.88 0.00 0.00 4.00
3015 4158 3.383825 AGCGATGTAGTTAACCCCTGTAG 59.616 47.826 0.88 0.00 0.00 2.74
3016 4159 3.492137 GCGATGTAGTTAACCCCTGTAGG 60.492 52.174 0.88 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.400961 ACTGCTGCGGGCTTCCTC 62.401 66.667 13.87 0.00 42.39 3.71
2 3 4.711949 CACTGCTGCGGGCTTCCT 62.712 66.667 13.87 0.00 42.39 3.36
4 5 4.704833 TCCACTGCTGCGGGCTTC 62.705 66.667 13.87 0.00 42.39 3.86
5 6 4.269523 TTCCACTGCTGCGGGCTT 62.270 61.111 13.87 0.00 42.39 4.35
10 11 4.988598 ACCGGTTCCACTGCTGCG 62.989 66.667 0.00 0.00 0.00 5.18
11 12 3.357079 CACCGGTTCCACTGCTGC 61.357 66.667 2.97 0.00 0.00 5.25
12 13 2.669569 CCACCGGTTCCACTGCTG 60.670 66.667 2.97 0.00 0.00 4.41
13 14 3.168528 ACCACCGGTTCCACTGCT 61.169 61.111 2.97 0.00 27.29 4.24
14 15 2.978010 CACCACCGGTTCCACTGC 60.978 66.667 2.97 0.00 31.02 4.40
15 16 2.281484 CCACCACCGGTTCCACTG 60.281 66.667 2.97 0.00 31.02 3.66
16 17 4.265056 GCCACCACCGGTTCCACT 62.265 66.667 2.97 0.00 31.02 4.00
100 101 4.895478 TAATACCCGCACCGCCGC 62.895 66.667 0.00 0.00 0.00 6.53
101 102 2.660552 CTAATACCCGCACCGCCG 60.661 66.667 0.00 0.00 0.00 6.46
102 103 2.280592 CCTAATACCCGCACCGCC 60.281 66.667 0.00 0.00 0.00 6.13
103 104 2.280592 CCCTAATACCCGCACCGC 60.281 66.667 0.00 0.00 0.00 5.68
104 105 0.107557 AAACCCTAATACCCGCACCG 60.108 55.000 0.00 0.00 0.00 4.94
105 106 2.435437 TCTAAACCCTAATACCCGCACC 59.565 50.000 0.00 0.00 0.00 5.01
106 107 3.825143 TCTAAACCCTAATACCCGCAC 57.175 47.619 0.00 0.00 0.00 5.34
107 108 3.432608 GCTTCTAAACCCTAATACCCGCA 60.433 47.826 0.00 0.00 0.00 5.69
108 109 3.136763 GCTTCTAAACCCTAATACCCGC 58.863 50.000 0.00 0.00 0.00 6.13
109 110 3.387397 CGCTTCTAAACCCTAATACCCG 58.613 50.000 0.00 0.00 0.00 5.28
110 111 3.389002 TCCGCTTCTAAACCCTAATACCC 59.611 47.826 0.00 0.00 0.00 3.69
111 112 4.677673 TCCGCTTCTAAACCCTAATACC 57.322 45.455 0.00 0.00 0.00 2.73
112 113 4.510711 GCTTCCGCTTCTAAACCCTAATAC 59.489 45.833 0.00 0.00 0.00 1.89
113 114 4.700700 GCTTCCGCTTCTAAACCCTAATA 58.299 43.478 0.00 0.00 0.00 0.98
114 115 3.542648 GCTTCCGCTTCTAAACCCTAAT 58.457 45.455 0.00 0.00 0.00 1.73
115 116 2.675889 CGCTTCCGCTTCTAAACCCTAA 60.676 50.000 0.00 0.00 0.00 2.69
116 117 1.134907 CGCTTCCGCTTCTAAACCCTA 60.135 52.381 0.00 0.00 0.00 3.53
117 118 0.391263 CGCTTCCGCTTCTAAACCCT 60.391 55.000 0.00 0.00 0.00 4.34
118 119 0.390735 TCGCTTCCGCTTCTAAACCC 60.391 55.000 0.00 0.00 0.00 4.11
119 120 1.593469 GATCGCTTCCGCTTCTAAACC 59.407 52.381 0.00 0.00 0.00 3.27
120 121 1.255600 CGATCGCTTCCGCTTCTAAAC 59.744 52.381 0.26 0.00 0.00 2.01
121 122 1.135199 ACGATCGCTTCCGCTTCTAAA 60.135 47.619 16.60 0.00 0.00 1.85
122 123 0.454600 ACGATCGCTTCCGCTTCTAA 59.545 50.000 16.60 0.00 0.00 2.10
123 124 1.302366 TACGATCGCTTCCGCTTCTA 58.698 50.000 16.60 0.00 0.00 2.10
124 125 0.454600 TTACGATCGCTTCCGCTTCT 59.545 50.000 16.60 0.00 0.00 2.85
125 126 0.571197 GTTACGATCGCTTCCGCTTC 59.429 55.000 16.60 0.00 0.00 3.86
126 127 0.804933 GGTTACGATCGCTTCCGCTT 60.805 55.000 16.60 0.00 0.00 4.68
127 128 1.226888 GGTTACGATCGCTTCCGCT 60.227 57.895 16.60 0.00 0.00 5.52
128 129 0.029834 TAGGTTACGATCGCTTCCGC 59.970 55.000 16.60 0.00 0.00 5.54
129 130 1.925068 GCTAGGTTACGATCGCTTCCG 60.925 57.143 16.60 4.59 0.00 4.30
130 131 1.768510 GCTAGGTTACGATCGCTTCC 58.231 55.000 16.60 14.35 0.00 3.46
131 132 1.268437 ACGCTAGGTTACGATCGCTTC 60.268 52.381 16.60 5.25 0.00 3.86
132 133 0.737219 ACGCTAGGTTACGATCGCTT 59.263 50.000 16.60 0.00 0.00 4.68
133 134 0.029035 CACGCTAGGTTACGATCGCT 59.971 55.000 16.60 6.62 0.00 4.93
134 135 0.028505 TCACGCTAGGTTACGATCGC 59.971 55.000 16.60 0.00 0.00 4.58
135 136 2.682952 ATCACGCTAGGTTACGATCG 57.317 50.000 14.88 14.88 0.00 3.69
136 137 3.251729 TGGTATCACGCTAGGTTACGATC 59.748 47.826 0.00 0.00 0.00 3.69
137 138 3.216800 TGGTATCACGCTAGGTTACGAT 58.783 45.455 0.00 0.00 0.00 3.73
138 139 2.642427 TGGTATCACGCTAGGTTACGA 58.358 47.619 0.00 0.00 0.00 3.43
139 140 3.243301 ACATGGTATCACGCTAGGTTACG 60.243 47.826 0.00 0.00 0.00 3.18
140 141 4.317671 ACATGGTATCACGCTAGGTTAC 57.682 45.455 0.00 0.00 0.00 2.50
141 142 5.829391 TCTTACATGGTATCACGCTAGGTTA 59.171 40.000 0.00 0.00 0.00 2.85
142 143 4.647853 TCTTACATGGTATCACGCTAGGTT 59.352 41.667 0.00 0.00 0.00 3.50
143 144 4.037684 GTCTTACATGGTATCACGCTAGGT 59.962 45.833 0.00 0.00 0.00 3.08
144 145 4.037565 TGTCTTACATGGTATCACGCTAGG 59.962 45.833 0.00 0.00 0.00 3.02
145 146 5.183014 TGTCTTACATGGTATCACGCTAG 57.817 43.478 0.00 0.00 0.00 3.42
146 147 5.585820 TTGTCTTACATGGTATCACGCTA 57.414 39.130 0.00 0.00 0.00 4.26
147 148 4.465632 TTGTCTTACATGGTATCACGCT 57.534 40.909 0.00 0.00 0.00 5.07
148 149 6.479001 ACTTATTGTCTTACATGGTATCACGC 59.521 38.462 0.00 0.00 0.00 5.34
149 150 8.420374 AACTTATTGTCTTACATGGTATCACG 57.580 34.615 0.00 0.00 0.00 4.35
153 154 8.966868 CCCAAAACTTATTGTCTTACATGGTAT 58.033 33.333 0.00 0.00 0.00 2.73
154 155 8.164733 TCCCAAAACTTATTGTCTTACATGGTA 58.835 33.333 0.00 0.00 0.00 3.25
155 156 7.007723 TCCCAAAACTTATTGTCTTACATGGT 58.992 34.615 0.00 0.00 0.00 3.55
156 157 7.461182 TCCCAAAACTTATTGTCTTACATGG 57.539 36.000 0.00 0.00 0.00 3.66
157 158 9.191995 GTTTCCCAAAACTTATTGTCTTACATG 57.808 33.333 0.00 0.00 41.32 3.21
158 159 8.364894 GGTTTCCCAAAACTTATTGTCTTACAT 58.635 33.333 1.53 0.00 43.55 2.29
159 160 7.342284 TGGTTTCCCAAAACTTATTGTCTTACA 59.658 33.333 1.53 0.00 43.55 2.41
160 161 7.718525 TGGTTTCCCAAAACTTATTGTCTTAC 58.281 34.615 1.53 0.00 43.55 2.34
161 162 7.470841 GCTGGTTTCCCAAAACTTATTGTCTTA 60.471 37.037 1.53 0.00 43.55 2.10
162 163 6.685368 GCTGGTTTCCCAAAACTTATTGTCTT 60.685 38.462 1.53 0.00 43.55 3.01
163 164 5.221441 GCTGGTTTCCCAAAACTTATTGTCT 60.221 40.000 1.53 0.00 43.55 3.41
164 165 4.988540 GCTGGTTTCCCAAAACTTATTGTC 59.011 41.667 1.53 0.00 43.55 3.18
165 166 4.407296 TGCTGGTTTCCCAAAACTTATTGT 59.593 37.500 1.53 0.00 43.55 2.71
166 167 4.749598 GTGCTGGTTTCCCAAAACTTATTG 59.250 41.667 1.53 0.00 43.55 1.90
167 168 4.407296 TGTGCTGGTTTCCCAAAACTTATT 59.593 37.500 1.53 0.00 43.55 1.40
168 169 3.964031 TGTGCTGGTTTCCCAAAACTTAT 59.036 39.130 1.53 0.00 43.55 1.73
169 170 3.366396 TGTGCTGGTTTCCCAAAACTTA 58.634 40.909 1.53 0.00 43.55 2.24
170 171 2.183679 TGTGCTGGTTTCCCAAAACTT 58.816 42.857 1.53 0.00 43.55 2.66
171 172 1.859302 TGTGCTGGTTTCCCAAAACT 58.141 45.000 1.53 0.00 43.55 2.66
172 173 2.276201 GTTGTGCTGGTTTCCCAAAAC 58.724 47.619 0.00 0.00 41.27 2.43
173 174 1.208293 GGTTGTGCTGGTTTCCCAAAA 59.792 47.619 0.00 0.00 41.27 2.44
174 175 0.827368 GGTTGTGCTGGTTTCCCAAA 59.173 50.000 0.00 0.00 41.27 3.28
175 176 1.045911 GGGTTGTGCTGGTTTCCCAA 61.046 55.000 0.00 0.00 41.27 4.12
176 177 1.456705 GGGTTGTGCTGGTTTCCCA 60.457 57.895 0.00 0.00 38.87 4.37
177 178 1.152546 AGGGTTGTGCTGGTTTCCC 60.153 57.895 0.00 0.00 35.56 3.97
178 179 0.178990 AGAGGGTTGTGCTGGTTTCC 60.179 55.000 0.00 0.00 0.00 3.13
179 180 2.427506 CTAGAGGGTTGTGCTGGTTTC 58.572 52.381 0.00 0.00 0.00 2.78
180 181 1.073923 CCTAGAGGGTTGTGCTGGTTT 59.926 52.381 0.00 0.00 0.00 3.27
181 182 0.693049 CCTAGAGGGTTGTGCTGGTT 59.307 55.000 0.00 0.00 0.00 3.67
182 183 2.377136 CCTAGAGGGTTGTGCTGGT 58.623 57.895 0.00 0.00 0.00 4.00
193 194 3.654273 TGAGATAAACCACCCCTAGAGG 58.346 50.000 0.00 0.00 0.00 3.69
194 195 5.896073 AATGAGATAAACCACCCCTAGAG 57.104 43.478 0.00 0.00 0.00 2.43
255 256 9.233649 GACTATGTATAGCTTCTGTACCTATGT 57.766 37.037 0.00 0.00 33.68 2.29
256 257 9.456147 AGACTATGTATAGCTTCTGTACCTATG 57.544 37.037 0.00 0.00 33.68 2.23
259 260 9.287373 GTTAGACTATGTATAGCTTCTGTACCT 57.713 37.037 0.00 0.00 33.68 3.08
260 261 9.064706 TGTTAGACTATGTATAGCTTCTGTACC 57.935 37.037 0.00 0.00 33.68 3.34
261 262 9.881529 GTGTTAGACTATGTATAGCTTCTGTAC 57.118 37.037 0.00 0.00 33.68 2.90
262 263 9.848710 AGTGTTAGACTATGTATAGCTTCTGTA 57.151 33.333 0.00 0.00 33.68 2.74
263 264 8.754991 AGTGTTAGACTATGTATAGCTTCTGT 57.245 34.615 0.00 0.00 33.68 3.41
267 268 9.968870 GCTTTAGTGTTAGACTATGTATAGCTT 57.031 33.333 0.00 0.00 37.01 3.74
268 269 9.132923 TGCTTTAGTGTTAGACTATGTATAGCT 57.867 33.333 0.00 0.00 37.01 3.32
269 270 9.400638 CTGCTTTAGTGTTAGACTATGTATAGC 57.599 37.037 0.00 0.00 37.01 2.97
284 285 9.331282 GGAAGATCAATAATACTGCTTTAGTGT 57.669 33.333 0.00 0.00 40.65 3.55
285 286 9.330063 TGGAAGATCAATAATACTGCTTTAGTG 57.670 33.333 0.00 0.00 40.65 2.74
288 289 9.851686 ACATGGAAGATCAATAATACTGCTTTA 57.148 29.630 0.00 0.00 0.00 1.85
289 290 8.757982 ACATGGAAGATCAATAATACTGCTTT 57.242 30.769 0.00 0.00 0.00 3.51
393 394 4.855715 TCTTTGTCGAGATGTCTTCACT 57.144 40.909 0.00 0.00 0.00 3.41
467 468 9.897744 CTGGTCGATAATGCATAAAAATACAAT 57.102 29.630 0.00 0.00 0.00 2.71
506 507 4.687483 GGCACTTGAAATTTGATTGTGAGG 59.313 41.667 12.76 0.00 0.00 3.86
585 586 6.906157 ATAAAGGTTGCATTATGATGGAGG 57.094 37.500 0.00 0.00 34.92 4.30
588 589 6.016360 TCCGAATAAAGGTTGCATTATGATGG 60.016 38.462 0.00 0.00 33.72 3.51
610 611 9.801873 AGAATTGGTAAACAAAAATATGATCCG 57.198 29.630 0.00 0.00 43.46 4.18
699 700 9.152327 TCATGATTAAATTAATGGTGGGCATAA 57.848 29.630 2.58 0.00 0.00 1.90
703 704 8.776470 CAAATCATGATTAAATTAATGGTGGGC 58.224 33.333 21.00 0.00 0.00 5.36
704 705 9.835389 ACAAATCATGATTAAATTAATGGTGGG 57.165 29.630 21.00 0.00 0.00 4.61
789 790 9.513906 TCAATTGTGGATAGACAACTTGATAAA 57.486 29.630 5.13 0.00 38.64 1.40
792 793 8.585471 AATCAATTGTGGATAGACAACTTGAT 57.415 30.769 5.13 0.00 40.70 2.57
814 816 8.383318 ACATGTGCTTGTGATATAAGGTAATC 57.617 34.615 0.00 0.00 0.00 1.75
832 837 2.977456 TGTCGTGCCCACATGTGC 60.977 61.111 20.81 10.81 34.22 4.57
866 881 2.581354 GCGGTCAGGAGCTGTCAT 59.419 61.111 0.00 0.00 32.61 3.06
896 911 3.355378 TCTGGCAATAATGTTGAGTGGG 58.645 45.455 0.00 0.00 0.00 4.61
930 945 1.335182 GCTCGATCTAGCACTGCAGTA 59.665 52.381 21.20 3.40 42.30 2.74
932 947 0.933973 CGCTCGATCTAGCACTGCAG 60.934 60.000 18.31 13.48 42.91 4.41
1116 1154 4.832608 GCGGCGAGGAACGGGAAT 62.833 66.667 12.98 0.00 42.83 3.01
1191 1229 1.098712 TGAACGCGAAAAGCCAGGTT 61.099 50.000 15.93 0.00 44.76 3.50
1200 1238 1.008995 GGCAAGCTTGAACGCGAAA 60.009 52.632 30.39 2.97 34.40 3.46
1202 1240 3.353836 GGGCAAGCTTGAACGCGA 61.354 61.111 30.39 0.00 34.40 5.87
1680 1744 4.758251 TGCATCAGCCCGGACACG 62.758 66.667 0.73 0.00 41.13 4.49
1842 1912 1.958715 CACAATCACCGTCGCCACA 60.959 57.895 0.00 0.00 0.00 4.17
1920 1990 3.780173 AGCAGCTTCTCCTCGCCC 61.780 66.667 0.00 0.00 0.00 6.13
1956 2026 2.680352 TCGAGGAAGAAGGCCGCT 60.680 61.111 0.00 0.00 0.00 5.52
1989 2059 2.288763 GGTTGAACGTCCAATGCCATTT 60.289 45.455 0.00 0.00 0.00 2.32
2000 2073 4.152607 ACTAGTTAGTCGGTTGAACGTC 57.847 45.455 0.00 0.00 34.94 4.34
2063 2665 5.296748 ACAATGCAATCTTGTTTGGTAACC 58.703 37.500 0.00 0.00 33.10 2.85
2066 2668 6.215121 CAAGACAATGCAATCTTGTTTGGTA 58.785 36.000 21.77 0.00 44.49 3.25
2097 2699 8.821894 GGTAAACAAGAAAATGCAATGTGTTAA 58.178 29.630 0.00 0.00 0.00 2.01
2098 2700 7.981789 TGGTAAACAAGAAAATGCAATGTGTTA 59.018 29.630 0.00 0.00 0.00 2.41
2099 2701 6.820656 TGGTAAACAAGAAAATGCAATGTGTT 59.179 30.769 0.00 0.00 0.00 3.32
2100 2702 6.344500 TGGTAAACAAGAAAATGCAATGTGT 58.656 32.000 0.00 0.00 0.00 3.72
2101 2703 6.841443 TGGTAAACAAGAAAATGCAATGTG 57.159 33.333 0.00 0.00 0.00 3.21
2102 2704 6.991531 ACATGGTAAACAAGAAAATGCAATGT 59.008 30.769 0.00 0.00 0.00 2.71
2106 2708 8.948631 TTTAACATGGTAAACAAGAAAATGCA 57.051 26.923 11.96 0.00 0.00 3.96
2107 2709 9.040939 ACTTTAACATGGTAAACAAGAAAATGC 57.959 29.630 11.96 0.00 0.00 3.56
2110 2712 9.796120 CAGACTTTAACATGGTAAACAAGAAAA 57.204 29.630 11.96 0.00 0.00 2.29
2111 2713 9.179909 TCAGACTTTAACATGGTAAACAAGAAA 57.820 29.630 11.96 0.00 0.00 2.52
2112 2714 8.740123 TCAGACTTTAACATGGTAAACAAGAA 57.260 30.769 11.96 0.00 0.00 2.52
2113 2715 8.208224 TCTCAGACTTTAACATGGTAAACAAGA 58.792 33.333 11.96 7.95 0.00 3.02
2168 2770 7.259161 ACGGAGTATTACATCTTTCTCACTTC 58.741 38.462 0.00 0.00 41.94 3.01
2188 2790 5.109210 TGATATTAGTTGTTGCTGACGGAG 58.891 41.667 0.00 0.00 0.00 4.63
2189 2791 5.079689 TGATATTAGTTGTTGCTGACGGA 57.920 39.130 0.00 0.00 0.00 4.69
2190 2792 5.794687 TTGATATTAGTTGTTGCTGACGG 57.205 39.130 0.00 0.00 0.00 4.79
2191 2793 9.935682 ATTAATTGATATTAGTTGTTGCTGACG 57.064 29.630 0.00 0.00 0.00 4.35
2243 3209 8.973182 GGTCCTAACATAATATTTCCCACAAAA 58.027 33.333 0.00 0.00 0.00 2.44
2245 3211 7.644062 TGGTCCTAACATAATATTTCCCACAA 58.356 34.615 0.00 0.00 0.00 3.33
2246 3212 7.128109 TCTGGTCCTAACATAATATTTCCCACA 59.872 37.037 0.00 0.00 0.00 4.17
2249 3215 8.164070 ACATCTGGTCCTAACATAATATTTCCC 58.836 37.037 0.00 0.00 0.00 3.97
2256 3222 9.166222 TGGTTATACATCTGGTCCTAACATAAT 57.834 33.333 0.00 0.00 33.02 1.28
2257 3223 8.555896 TGGTTATACATCTGGTCCTAACATAA 57.444 34.615 0.00 0.00 33.02 1.90
2259 3225 7.446106 TTGGTTATACATCTGGTCCTAACAT 57.554 36.000 0.00 0.00 33.02 2.71
2263 3229 7.306013 AGAGATTGGTTATACATCTGGTCCTA 58.694 38.462 0.00 0.00 0.00 2.94
2266 3232 8.421784 TGTAAGAGATTGGTTATACATCTGGTC 58.578 37.037 0.00 0.00 0.00 4.02
2279 3245 9.512588 GGATGAAATGATATGTAAGAGATTGGT 57.487 33.333 0.00 0.00 0.00 3.67
2301 3267 8.896744 ACACTTCACACTTCATATAATTGGATG 58.103 33.333 0.00 0.00 0.00 3.51
2302 3268 8.896744 CACACTTCACACTTCATATAATTGGAT 58.103 33.333 0.00 0.00 0.00 3.41
2304 3270 8.267620 TCACACTTCACACTTCATATAATTGG 57.732 34.615 0.00 0.00 0.00 3.16
2308 3274 7.931407 ACACTTCACACTTCACACTTCATATAA 59.069 33.333 0.00 0.00 0.00 0.98
2309 3275 7.384932 CACACTTCACACTTCACACTTCATATA 59.615 37.037 0.00 0.00 0.00 0.86
2310 3276 6.203530 CACACTTCACACTTCACACTTCATAT 59.796 38.462 0.00 0.00 0.00 1.78
2311 3277 5.523552 CACACTTCACACTTCACACTTCATA 59.476 40.000 0.00 0.00 0.00 2.15
2313 3279 3.684305 CACACTTCACACTTCACACTTCA 59.316 43.478 0.00 0.00 0.00 3.02
2314 3280 3.932710 TCACACTTCACACTTCACACTTC 59.067 43.478 0.00 0.00 0.00 3.01
2315 3281 3.684788 GTCACACTTCACACTTCACACTT 59.315 43.478 0.00 0.00 0.00 3.16
2317 3283 2.351726 GGTCACACTTCACACTTCACAC 59.648 50.000 0.00 0.00 0.00 3.82
2318 3284 2.027653 TGGTCACACTTCACACTTCACA 60.028 45.455 0.00 0.00 0.00 3.58
2319 3285 2.351726 GTGGTCACACTTCACACTTCAC 59.648 50.000 0.00 0.00 44.29 3.18
2331 3297 1.569493 GCGTGTCATGTGGTCACAC 59.431 57.895 5.89 4.88 45.05 3.82
2332 3298 1.953642 CGCGTGTCATGTGGTCACA 60.954 57.895 6.24 6.24 46.44 3.58
2333 3299 1.954146 ACGCGTGTCATGTGGTCAC 60.954 57.895 12.93 0.00 0.00 3.67
2334 3300 1.953642 CACGCGTGTCATGTGGTCA 60.954 57.895 30.50 0.00 0.00 4.02
2335 3301 2.667318 CCACGCGTGTCATGTGGTC 61.667 63.158 34.81 0.00 46.36 4.02
2338 3304 0.438445 CTTACCACGCGTGTCATGTG 59.562 55.000 34.81 21.74 0.00 3.21
2339 3305 1.289109 GCTTACCACGCGTGTCATGT 61.289 55.000 34.81 26.82 0.00 3.21
2341 3307 0.601576 TTGCTTACCACGCGTGTCAT 60.602 50.000 34.81 22.79 0.00 3.06
2342 3308 0.601576 ATTGCTTACCACGCGTGTCA 60.602 50.000 34.81 20.76 0.00 3.58
2343 3309 0.094730 GATTGCTTACCACGCGTGTC 59.905 55.000 34.81 20.46 0.00 3.67
2345 3311 1.295357 TGGATTGCTTACCACGCGTG 61.295 55.000 31.77 31.77 0.00 5.34
2346 3312 0.604243 TTGGATTGCTTACCACGCGT 60.604 50.000 5.58 5.58 35.81 6.01
2347 3313 0.519519 TTTGGATTGCTTACCACGCG 59.480 50.000 3.53 3.53 35.81 6.01
2348 3314 1.539827 AGTTTGGATTGCTTACCACGC 59.460 47.619 0.00 0.00 35.81 5.34
2349 3315 2.552315 ACAGTTTGGATTGCTTACCACG 59.448 45.455 0.00 0.00 35.81 4.94
2351 3317 6.909550 ATAAACAGTTTGGATTGCTTACCA 57.090 33.333 8.93 0.00 0.00 3.25
2352 3318 9.699703 TTTTATAAACAGTTTGGATTGCTTACC 57.300 29.630 8.93 0.00 0.00 2.85
2385 3493 5.937540 TCGATTTTGACTGTTCATACCACAT 59.062 36.000 0.00 0.00 0.00 3.21
2387 3495 5.856126 TCGATTTTGACTGTTCATACCAC 57.144 39.130 0.00 0.00 0.00 4.16
2391 3499 9.958234 TTTGAAAATCGATTTTGACTGTTCATA 57.042 25.926 34.35 18.79 39.86 2.15
2392 3500 8.870160 TTTGAAAATCGATTTTGACTGTTCAT 57.130 26.923 34.35 11.82 39.86 2.57
2393 3501 7.973388 ACTTTGAAAATCGATTTTGACTGTTCA 59.027 29.630 34.35 22.96 39.86 3.18
2394 3502 8.340230 ACTTTGAAAATCGATTTTGACTGTTC 57.660 30.769 34.35 20.96 39.86 3.18
2395 3503 8.702163 AACTTTGAAAATCGATTTTGACTGTT 57.298 26.923 34.35 27.03 39.86 3.16
2396 3504 8.702163 AAACTTTGAAAATCGATTTTGACTGT 57.298 26.923 34.35 23.93 39.86 3.55
2397 3505 9.623687 GAAAACTTTGAAAATCGATTTTGACTG 57.376 29.630 34.35 23.40 39.86 3.51
2398 3506 9.364989 TGAAAACTTTGAAAATCGATTTTGACT 57.635 25.926 34.35 15.68 39.86 3.41
2400 3508 9.144747 TGTGAAAACTTTGAAAATCGATTTTGA 57.855 25.926 34.35 26.15 39.86 2.69
2401 3509 9.919348 ATGTGAAAACTTTGAAAATCGATTTTG 57.081 25.926 34.35 23.42 39.86 2.44
2402 3510 9.919348 CATGTGAAAACTTTGAAAATCGATTTT 57.081 25.926 30.88 30.88 42.24 1.82
2403 3511 8.063630 GCATGTGAAAACTTTGAAAATCGATTT 58.936 29.630 17.60 17.60 0.00 2.17
2405 3513 6.925165 AGCATGTGAAAACTTTGAAAATCGAT 59.075 30.769 0.00 0.00 0.00 3.59
2406 3514 6.272318 AGCATGTGAAAACTTTGAAAATCGA 58.728 32.000 0.00 0.00 0.00 3.59
2407 3515 6.515043 AGCATGTGAAAACTTTGAAAATCG 57.485 33.333 0.00 0.00 0.00 3.34
2409 3517 8.611757 GGTTTAGCATGTGAAAACTTTGAAAAT 58.388 29.630 14.86 0.00 34.34 1.82
2410 3518 7.604164 TGGTTTAGCATGTGAAAACTTTGAAAA 59.396 29.630 14.86 0.00 34.34 2.29
2413 3521 6.214191 TGGTTTAGCATGTGAAAACTTTGA 57.786 33.333 14.86 0.00 34.34 2.69
2414 3522 6.479660 ACATGGTTTAGCATGTGAAAACTTTG 59.520 34.615 22.52 14.19 40.16 2.77
2415 3523 6.581712 ACATGGTTTAGCATGTGAAAACTTT 58.418 32.000 22.52 0.00 40.16 2.66
2417 3525 5.789643 ACATGGTTTAGCATGTGAAAACT 57.210 34.783 22.52 0.95 40.16 2.66
2424 3532 1.921982 TGCCACATGGTTTAGCATGT 58.078 45.000 18.85 18.85 42.12 3.21
2425 3533 3.530265 ATTGCCACATGGTTTAGCATG 57.470 42.857 17.67 17.67 37.57 4.06
2426 3534 4.280819 ACTATTGCCACATGGTTTAGCAT 58.719 39.130 0.00 0.00 37.57 3.79
2428 3536 5.530915 TGATACTATTGCCACATGGTTTAGC 59.469 40.000 0.00 0.00 37.57 3.09
2430 3538 6.039270 GCTTGATACTATTGCCACATGGTTTA 59.961 38.462 0.00 0.00 37.57 2.01
2433 3541 3.885297 GCTTGATACTATTGCCACATGGT 59.115 43.478 0.00 0.00 37.57 3.55
2434 3542 3.884693 TGCTTGATACTATTGCCACATGG 59.115 43.478 0.00 0.00 38.53 3.66
2435 3543 5.503662 TTGCTTGATACTATTGCCACATG 57.496 39.130 0.00 0.00 0.00 3.21
2438 3546 5.067674 TGGATTTGCTTGATACTATTGCCAC 59.932 40.000 0.00 0.00 0.00 5.01
2439 3547 5.199723 TGGATTTGCTTGATACTATTGCCA 58.800 37.500 0.00 0.00 0.00 4.92
2441 3549 6.197096 CGTTTGGATTTGCTTGATACTATTGC 59.803 38.462 0.00 0.00 0.00 3.56
2443 3551 6.265577 GCGTTTGGATTTGCTTGATACTATT 58.734 36.000 0.00 0.00 0.00 1.73
2444 3552 5.221048 GGCGTTTGGATTTGCTTGATACTAT 60.221 40.000 0.00 0.00 0.00 2.12
2445 3553 4.095782 GGCGTTTGGATTTGCTTGATACTA 59.904 41.667 0.00 0.00 0.00 1.82
2449 3557 1.617850 TGGCGTTTGGATTTGCTTGAT 59.382 42.857 0.00 0.00 0.00 2.57
2450 3558 1.035923 TGGCGTTTGGATTTGCTTGA 58.964 45.000 0.00 0.00 0.00 3.02
2452 3560 2.837532 AATGGCGTTTGGATTTGCTT 57.162 40.000 0.00 0.00 0.00 3.91
2454 3562 4.665394 CGTTAAAATGGCGTTTGGATTTGC 60.665 41.667 5.28 0.00 0.00 3.68
2455 3563 4.665394 GCGTTAAAATGGCGTTTGGATTTG 60.665 41.667 5.28 0.00 0.00 2.32
2458 3566 2.230266 AGCGTTAAAATGGCGTTTGGAT 59.770 40.909 5.28 0.00 0.00 3.41
2461 3569 1.982913 GGAGCGTTAAAATGGCGTTTG 59.017 47.619 5.28 0.00 0.00 2.93
2462 3570 1.609555 TGGAGCGTTAAAATGGCGTTT 59.390 42.857 0.00 0.00 0.00 3.60
2463 3571 1.240256 TGGAGCGTTAAAATGGCGTT 58.760 45.000 0.00 0.00 0.00 4.84
2466 3574 4.494484 AGAAATTGGAGCGTTAAAATGGC 58.506 39.130 0.00 0.00 0.00 4.40
2471 3614 4.830600 AGGGAAAGAAATTGGAGCGTTAAA 59.169 37.500 0.00 0.00 0.00 1.52
2475 3618 2.586648 AGGGAAAGAAATTGGAGCGT 57.413 45.000 0.00 0.00 0.00 5.07
2476 3619 2.819608 TGAAGGGAAAGAAATTGGAGCG 59.180 45.455 0.00 0.00 0.00 5.03
2477 3620 3.829026 AGTGAAGGGAAAGAAATTGGAGC 59.171 43.478 0.00 0.00 0.00 4.70
2480 3623 8.367156 TGAAAATAGTGAAGGGAAAGAAATTGG 58.633 33.333 0.00 0.00 0.00 3.16
2481 3624 9.933723 ATGAAAATAGTGAAGGGAAAGAAATTG 57.066 29.630 0.00 0.00 0.00 2.32
2486 3629 7.779798 CCCATATGAAAATAGTGAAGGGAAAGA 59.220 37.037 3.65 0.00 34.49 2.52
2490 3633 5.435041 ACCCCATATGAAAATAGTGAAGGGA 59.565 40.000 3.65 0.00 34.49 4.20
2491 3634 5.705400 ACCCCATATGAAAATAGTGAAGGG 58.295 41.667 3.65 4.07 35.70 3.95
2492 3635 6.040842 CCAACCCCATATGAAAATAGTGAAGG 59.959 42.308 3.65 0.00 0.00 3.46
2493 3636 6.833416 TCCAACCCCATATGAAAATAGTGAAG 59.167 38.462 3.65 0.00 0.00 3.02
2494 3637 6.605594 GTCCAACCCCATATGAAAATAGTGAA 59.394 38.462 3.65 0.00 0.00 3.18
2497 3640 6.129179 CAGTCCAACCCCATATGAAAATAGT 58.871 40.000 3.65 0.00 0.00 2.12
2500 3643 4.946646 ACAGTCCAACCCCATATGAAAAT 58.053 39.130 3.65 0.00 0.00 1.82
2501 3644 4.396357 ACAGTCCAACCCCATATGAAAA 57.604 40.909 3.65 0.00 0.00 2.29
2509 3652 2.556766 TCATGATACAGTCCAACCCCA 58.443 47.619 0.00 0.00 0.00 4.96
2511 3654 5.192927 TCAAATCATGATACAGTCCAACCC 58.807 41.667 9.04 0.00 31.50 4.11
2559 3702 8.491152 CGCACATCATTTTATTTACCAAACAAA 58.509 29.630 0.00 0.00 0.00 2.83
2560 3703 7.359598 GCGCACATCATTTTATTTACCAAACAA 60.360 33.333 0.30 0.00 0.00 2.83
2563 3706 6.393990 AGCGCACATCATTTTATTTACCAAA 58.606 32.000 11.47 0.00 0.00 3.28
2564 3707 5.960113 AGCGCACATCATTTTATTTACCAA 58.040 33.333 11.47 0.00 0.00 3.67
2565 3708 5.574891 AGCGCACATCATTTTATTTACCA 57.425 34.783 11.47 0.00 0.00 3.25
2566 3709 6.237808 CCAAAGCGCACATCATTTTATTTACC 60.238 38.462 11.47 0.00 0.00 2.85
2567 3710 6.310224 ACCAAAGCGCACATCATTTTATTTAC 59.690 34.615 11.47 0.00 0.00 2.01
2570 3713 4.819769 ACCAAAGCGCACATCATTTTATT 58.180 34.783 11.47 0.00 0.00 1.40
2572 3715 3.932545 ACCAAAGCGCACATCATTTTA 57.067 38.095 11.47 0.00 0.00 1.52
2573 3716 2.818130 ACCAAAGCGCACATCATTTT 57.182 40.000 11.47 0.00 0.00 1.82
2574 3717 2.818130 AACCAAAGCGCACATCATTT 57.182 40.000 11.47 0.00 0.00 2.32
2576 3719 4.175516 CAAATAACCAAAGCGCACATCAT 58.824 39.130 11.47 0.00 0.00 2.45
2578 3721 3.574614 ACAAATAACCAAAGCGCACATC 58.425 40.909 11.47 0.00 0.00 3.06
2581 3724 4.481463 ACATACAAATAACCAAAGCGCAC 58.519 39.130 11.47 0.00 0.00 5.34
2583 3726 6.319399 ACTAACATACAAATAACCAAAGCGC 58.681 36.000 0.00 0.00 0.00 5.92
2584 3727 7.523219 TGACTAACATACAAATAACCAAAGCG 58.477 34.615 0.00 0.00 0.00 4.68
2597 3740 9.408648 TGATGAAGACTCTATGACTAACATACA 57.591 33.333 0.00 0.00 40.07 2.29
2598 3741 9.672086 GTGATGAAGACTCTATGACTAACATAC 57.328 37.037 0.00 0.00 40.07 2.39
2599 3742 9.634021 AGTGATGAAGACTCTATGACTAACATA 57.366 33.333 0.00 0.00 40.07 2.29
2601 3744 7.946381 AGTGATGAAGACTCTATGACTAACA 57.054 36.000 0.00 0.00 0.00 2.41
2602 3745 8.247562 ACAAGTGATGAAGACTCTATGACTAAC 58.752 37.037 0.00 0.00 0.00 2.34
2603 3746 8.354711 ACAAGTGATGAAGACTCTATGACTAA 57.645 34.615 0.00 0.00 0.00 2.24
2604 3747 7.946381 ACAAGTGATGAAGACTCTATGACTA 57.054 36.000 0.00 0.00 0.00 2.59
2605 3748 6.849085 ACAAGTGATGAAGACTCTATGACT 57.151 37.500 0.00 0.00 0.00 3.41
2606 3749 9.593134 AAATACAAGTGATGAAGACTCTATGAC 57.407 33.333 0.00 0.00 0.00 3.06
2633 3776 9.893305 CACTTATTTTGAAACGAAGGAAGTATT 57.107 29.630 0.00 0.00 0.00 1.89
2634 3777 9.063615 ACACTTATTTTGAAACGAAGGAAGTAT 57.936 29.630 0.00 0.00 0.00 2.12
2636 3779 7.329588 ACACTTATTTTGAAACGAAGGAAGT 57.670 32.000 0.00 0.00 0.00 3.01
2639 3782 5.524646 ACGACACTTATTTTGAAACGAAGGA 59.475 36.000 0.00 0.00 0.00 3.36
2640 3783 5.744490 ACGACACTTATTTTGAAACGAAGG 58.256 37.500 0.00 0.00 0.00 3.46
2642 3785 6.773080 TCAACGACACTTATTTTGAAACGAA 58.227 32.000 0.00 0.00 0.00 3.85
2643 3786 6.347270 TCAACGACACTTATTTTGAAACGA 57.653 33.333 0.00 0.00 0.00 3.85
2644 3787 7.603297 AATCAACGACACTTATTTTGAAACG 57.397 32.000 0.00 0.00 30.34 3.60
2652 3795 9.485206 ACTTGTACTAAATCAACGACACTTATT 57.515 29.630 0.00 0.00 0.00 1.40
2653 3796 9.485206 AACTTGTACTAAATCAACGACACTTAT 57.515 29.630 0.00 0.00 0.00 1.73
2654 3797 8.876275 AACTTGTACTAAATCAACGACACTTA 57.124 30.769 0.00 0.00 0.00 2.24
2655 3798 7.493320 TGAACTTGTACTAAATCAACGACACTT 59.507 33.333 0.00 0.00 0.00 3.16
2657 3800 7.169035 TGAACTTGTACTAAATCAACGACAC 57.831 36.000 0.00 0.00 0.00 3.67
2658 3801 7.956420 ATGAACTTGTACTAAATCAACGACA 57.044 32.000 0.00 0.00 0.00 4.35
2659 3802 8.280497 ACAATGAACTTGTACTAAATCAACGAC 58.720 33.333 0.00 0.00 46.30 4.34
2660 3803 8.279800 CACAATGAACTTGTACTAAATCAACGA 58.720 33.333 0.00 0.00 46.43 3.85
2670 3813 8.820933 CGATGAATATCACAATGAACTTGTACT 58.179 33.333 0.00 0.00 46.43 2.73
2671 3814 8.604035 ACGATGAATATCACAATGAACTTGTAC 58.396 33.333 0.00 0.00 46.43 2.90
2674 3817 8.820933 AGTACGATGAATATCACAATGAACTTG 58.179 33.333 0.00 0.00 40.90 3.16
2694 3837 9.787532 GTTGTAACAAGTTACCATATAGTACGA 57.212 33.333 17.66 0.00 43.47 3.43
2695 3838 9.571810 TGTTGTAACAAGTTACCATATAGTACG 57.428 33.333 17.66 0.00 43.47 3.67
2764 3907 9.245962 GCTAACGAACATGATAACTACACTATT 57.754 33.333 0.00 0.00 0.00 1.73
2765 3908 8.410912 TGCTAACGAACATGATAACTACACTAT 58.589 33.333 0.00 0.00 0.00 2.12
2766 3909 7.764331 TGCTAACGAACATGATAACTACACTA 58.236 34.615 0.00 0.00 0.00 2.74
2767 3910 6.627243 TGCTAACGAACATGATAACTACACT 58.373 36.000 0.00 0.00 0.00 3.55
2768 3911 6.880822 TGCTAACGAACATGATAACTACAC 57.119 37.500 0.00 0.00 0.00 2.90
2769 3912 9.244799 CTAATGCTAACGAACATGATAACTACA 57.755 33.333 0.00 0.00 0.00 2.74
2770 3913 9.245962 ACTAATGCTAACGAACATGATAACTAC 57.754 33.333 0.00 0.00 0.00 2.73
2771 3914 9.459640 GACTAATGCTAACGAACATGATAACTA 57.540 33.333 0.00 0.00 0.00 2.24
2772 3915 7.979537 TGACTAATGCTAACGAACATGATAACT 59.020 33.333 0.00 0.00 0.00 2.24
2773 3916 8.056571 GTGACTAATGCTAACGAACATGATAAC 58.943 37.037 0.00 0.00 0.00 1.89
2774 3917 7.223971 GGTGACTAATGCTAACGAACATGATAA 59.776 37.037 0.00 0.00 0.00 1.75
2775 3918 6.700081 GGTGACTAATGCTAACGAACATGATA 59.300 38.462 0.00 0.00 0.00 2.15
2776 3919 5.523916 GGTGACTAATGCTAACGAACATGAT 59.476 40.000 0.00 0.00 0.00 2.45
2777 3920 4.868171 GGTGACTAATGCTAACGAACATGA 59.132 41.667 0.00 0.00 0.00 3.07
2778 3921 4.259810 CGGTGACTAATGCTAACGAACATG 60.260 45.833 0.00 0.00 0.00 3.21
2779 3922 3.863424 CGGTGACTAATGCTAACGAACAT 59.137 43.478 0.00 0.00 0.00 2.71
2780 3923 3.247442 CGGTGACTAATGCTAACGAACA 58.753 45.455 0.00 0.00 0.00 3.18
2781 3924 2.028883 GCGGTGACTAATGCTAACGAAC 59.971 50.000 0.00 0.00 0.00 3.95
2782 3925 2.264813 GCGGTGACTAATGCTAACGAA 58.735 47.619 0.00 0.00 0.00 3.85
2783 3926 1.470285 GGCGGTGACTAATGCTAACGA 60.470 52.381 0.00 0.00 0.00 3.85
2784 3927 0.928229 GGCGGTGACTAATGCTAACG 59.072 55.000 0.00 0.00 0.00 3.18
2785 3928 2.018542 TGGCGGTGACTAATGCTAAC 57.981 50.000 0.00 0.00 0.00 2.34
2786 3929 2.560504 CATGGCGGTGACTAATGCTAA 58.439 47.619 0.00 0.00 0.00 3.09
2787 3930 1.202639 CCATGGCGGTGACTAATGCTA 60.203 52.381 0.00 0.00 0.00 3.49
2788 3931 0.464373 CCATGGCGGTGACTAATGCT 60.464 55.000 0.00 0.00 0.00 3.79
2789 3932 2.024918 CCATGGCGGTGACTAATGC 58.975 57.895 0.00 0.00 0.00 3.56
2799 3942 1.302913 TACACAACCACCATGGCGG 60.303 57.895 17.64 17.64 42.67 6.13
2800 3943 0.605319 AGTACACAACCACCATGGCG 60.605 55.000 13.04 0.90 42.67 5.69
2801 3944 1.616159 AAGTACACAACCACCATGGC 58.384 50.000 13.04 0.00 42.67 4.40
2802 3945 3.078837 GGTAAGTACACAACCACCATGG 58.921 50.000 11.19 11.19 45.02 3.66
2803 3946 3.751175 CAGGTAAGTACACAACCACCATG 59.249 47.826 12.23 0.00 36.55 3.66
2804 3947 3.809324 GCAGGTAAGTACACAACCACCAT 60.809 47.826 12.23 0.00 36.55 3.55
2805 3948 2.485835 GCAGGTAAGTACACAACCACCA 60.486 50.000 12.23 0.00 36.55 4.17
2806 3949 2.148768 GCAGGTAAGTACACAACCACC 58.851 52.381 12.23 2.82 35.64 4.61
2807 3950 2.148768 GGCAGGTAAGTACACAACCAC 58.851 52.381 12.23 5.40 35.64 4.16
2808 3951 1.072648 GGGCAGGTAAGTACACAACCA 59.927 52.381 12.23 0.00 35.64 3.67
2809 3952 1.072648 TGGGCAGGTAAGTACACAACC 59.927 52.381 0.00 0.00 0.00 3.77
2810 3953 2.554370 TGGGCAGGTAAGTACACAAC 57.446 50.000 0.00 0.00 0.00 3.32
2811 3954 2.290641 CCATGGGCAGGTAAGTACACAA 60.291 50.000 2.85 0.00 0.00 3.33
2812 3955 1.280710 CCATGGGCAGGTAAGTACACA 59.719 52.381 2.85 0.00 0.00 3.72
2813 3956 1.280998 ACCATGGGCAGGTAAGTACAC 59.719 52.381 18.09 0.00 37.67 2.90
2814 3957 1.280710 CACCATGGGCAGGTAAGTACA 59.719 52.381 18.09 0.00 37.23 2.90
2815 3958 1.280998 ACACCATGGGCAGGTAAGTAC 59.719 52.381 18.09 0.00 37.23 2.73
2816 3959 1.663911 ACACCATGGGCAGGTAAGTA 58.336 50.000 18.09 0.00 37.23 2.24
2817 3960 1.663911 TACACCATGGGCAGGTAAGT 58.336 50.000 18.09 3.92 37.23 2.24
2818 3961 2.290641 TGTTACACCATGGGCAGGTAAG 60.291 50.000 18.09 0.00 37.23 2.34
2819 3962 1.705745 TGTTACACCATGGGCAGGTAA 59.294 47.619 18.09 15.09 37.23 2.85
2820 3963 1.280710 CTGTTACACCATGGGCAGGTA 59.719 52.381 18.09 9.95 37.23 3.08
2821 3964 0.038166 CTGTTACACCATGGGCAGGT 59.962 55.000 18.09 10.97 40.85 4.00
2822 3965 0.038166 ACTGTTACACCATGGGCAGG 59.962 55.000 18.09 5.05 0.00 4.85
2823 3966 1.541147 CAACTGTTACACCATGGGCAG 59.459 52.381 18.09 16.65 0.00 4.85
2824 3967 1.614996 CAACTGTTACACCATGGGCA 58.385 50.000 18.09 5.92 0.00 5.36
2825 3968 0.243636 GCAACTGTTACACCATGGGC 59.756 55.000 18.09 1.22 0.00 5.36
2826 3969 0.887933 GGCAACTGTTACACCATGGG 59.112 55.000 18.09 7.72 0.00 4.00
2827 3970 1.269448 GTGGCAACTGTTACACCATGG 59.731 52.381 11.19 11.19 31.99 3.66
2828 3971 2.229792 AGTGGCAACTGTTACACCATG 58.770 47.619 18.21 0.00 34.48 3.66
2829 3972 2.656947 AGTGGCAACTGTTACACCAT 57.343 45.000 18.21 4.53 34.48 3.55
2847 3990 2.768253 TCTGATAACTGCCACCACAG 57.232 50.000 0.00 0.00 43.59 3.66
2848 3991 3.719268 AATCTGATAACTGCCACCACA 57.281 42.857 0.00 0.00 0.00 4.17
2849 3992 5.008019 CACATAATCTGATAACTGCCACCAC 59.992 44.000 0.00 0.00 0.00 4.16
2850 3993 5.104569 TCACATAATCTGATAACTGCCACCA 60.105 40.000 0.00 0.00 0.00 4.17
2851 3994 5.368145 TCACATAATCTGATAACTGCCACC 58.632 41.667 0.00 0.00 0.00 4.61
2852 3995 6.925610 TTCACATAATCTGATAACTGCCAC 57.074 37.500 0.00 0.00 0.00 5.01
2873 4016 9.921637 TGTCATCCTATGGTTTAACAATTTTTC 57.078 29.630 0.00 0.00 0.00 2.29
2875 4018 9.705290 GTTGTCATCCTATGGTTTAACAATTTT 57.295 29.630 0.00 0.00 0.00 1.82
2877 4020 8.650143 AGTTGTCATCCTATGGTTTAACAATT 57.350 30.769 0.00 0.00 0.00 2.32
2878 4021 9.174166 GTAGTTGTCATCCTATGGTTTAACAAT 57.826 33.333 0.00 0.00 0.00 2.71
2879 4022 8.380099 AGTAGTTGTCATCCTATGGTTTAACAA 58.620 33.333 0.00 0.00 0.00 2.83
2881 4024 9.310716 GTAGTAGTTGTCATCCTATGGTTTAAC 57.689 37.037 0.00 0.00 0.00 2.01
2885 4028 7.556844 CAAGTAGTAGTTGTCATCCTATGGTT 58.443 38.462 9.25 0.00 0.00 3.67
2887 4030 5.986135 GCAAGTAGTAGTTGTCATCCTATGG 59.014 44.000 17.12 0.00 31.33 2.74
2889 4032 8.580720 CATAGCAAGTAGTAGTTGTCATCCTAT 58.419 37.037 17.12 12.05 31.33 2.57
2890 4033 7.560262 ACATAGCAAGTAGTAGTTGTCATCCTA 59.440 37.037 17.12 10.61 31.33 2.94
2891 4034 6.381420 ACATAGCAAGTAGTAGTTGTCATCCT 59.619 38.462 17.12 9.04 31.33 3.24
2892 4035 6.574350 ACATAGCAAGTAGTAGTTGTCATCC 58.426 40.000 17.12 2.70 31.33 3.51
2893 4036 7.545965 ACAACATAGCAAGTAGTAGTTGTCATC 59.454 37.037 17.12 3.02 42.92 2.92
2894 4037 7.386851 ACAACATAGCAAGTAGTAGTTGTCAT 58.613 34.615 17.12 9.15 42.92 3.06
2896 4039 7.653767 AACAACATAGCAAGTAGTAGTTGTC 57.346 36.000 17.12 10.54 44.89 3.18
2897 4040 7.095774 CGAAACAACATAGCAAGTAGTAGTTGT 60.096 37.037 17.12 6.95 46.82 3.32
2899 4042 7.149973 TCGAAACAACATAGCAAGTAGTAGTT 58.850 34.615 0.00 0.00 0.00 2.24
2901 4044 7.576750 TTCGAAACAACATAGCAAGTAGTAG 57.423 36.000 0.00 0.00 0.00 2.57
2902 4045 7.949903 TTTCGAAACAACATAGCAAGTAGTA 57.050 32.000 6.47 0.00 0.00 1.82
2904 4047 7.201266 GCAATTTCGAAACAACATAGCAAGTAG 60.201 37.037 13.81 0.00 0.00 2.57
2906 4049 5.402270 GCAATTTCGAAACAACATAGCAAGT 59.598 36.000 13.81 0.00 0.00 3.16
2908 4051 5.527951 AGCAATTTCGAAACAACATAGCAA 58.472 33.333 13.81 0.00 0.00 3.91
2910 4053 7.007456 GTCTAAGCAATTTCGAAACAACATAGC 59.993 37.037 13.81 9.36 0.00 2.97
2913 4056 6.734137 TGTCTAAGCAATTTCGAAACAACAT 58.266 32.000 13.81 2.79 0.00 2.71
2914 4057 6.125327 TGTCTAAGCAATTTCGAAACAACA 57.875 33.333 13.81 6.14 0.00 3.33
2915 4058 7.623268 ATTGTCTAAGCAATTTCGAAACAAC 57.377 32.000 13.81 5.27 35.76 3.32
2916 4059 9.906660 ATTATTGTCTAAGCAATTTCGAAACAA 57.093 25.926 13.81 10.48 39.50 2.83
2917 4060 9.906660 AATTATTGTCTAAGCAATTTCGAAACA 57.093 25.926 13.81 0.69 39.50 2.83
2933 4076 9.515226 ACACCACTACAATTGTAATTATTGTCT 57.485 29.630 18.55 0.00 43.24 3.41
2942 4085 8.776470 GCTAACTAAACACCACTACAATTGTAA 58.224 33.333 18.55 4.05 0.00 2.41
2943 4086 7.932491 TGCTAACTAAACACCACTACAATTGTA 59.068 33.333 17.16 17.16 0.00 2.41
2944 4087 6.768861 TGCTAACTAAACACCACTACAATTGT 59.231 34.615 16.68 16.68 0.00 2.71
2945 4088 7.197071 TGCTAACTAAACACCACTACAATTG 57.803 36.000 3.24 3.24 0.00 2.32
2946 4089 7.148474 CGATGCTAACTAAACACCACTACAATT 60.148 37.037 0.00 0.00 0.00 2.32
2947 4090 6.312918 CGATGCTAACTAAACACCACTACAAT 59.687 38.462 0.00 0.00 0.00 2.71
2950 4093 4.032558 GCGATGCTAACTAAACACCACTAC 59.967 45.833 0.00 0.00 0.00 2.73
2951 4094 4.178540 GCGATGCTAACTAAACACCACTA 58.821 43.478 0.00 0.00 0.00 2.74
2952 4095 3.000727 GCGATGCTAACTAAACACCACT 58.999 45.455 0.00 0.00 0.00 4.00
2953 4096 2.222729 CGCGATGCTAACTAAACACCAC 60.223 50.000 0.00 0.00 0.00 4.16
2954 4097 1.996898 CGCGATGCTAACTAAACACCA 59.003 47.619 0.00 0.00 0.00 4.17
2955 4098 2.264813 TCGCGATGCTAACTAAACACC 58.735 47.619 3.71 0.00 0.00 4.16
2956 4099 3.550275 TCATCGCGATGCTAACTAAACAC 59.450 43.478 37.84 0.00 38.65 3.32
2958 4101 4.692135 CATCATCGCGATGCTAACTAAAC 58.308 43.478 37.84 0.00 44.95 2.01
2969 4112 5.929697 AATTGTTGATACATCATCGCGAT 57.070 34.783 17.62 17.62 36.56 4.58
2971 4114 5.561499 GCTTAATTGTTGATACATCATCGCG 59.439 40.000 0.00 0.00 36.56 5.87
2972 4115 5.561499 CGCTTAATTGTTGATACATCATCGC 59.439 40.000 0.00 0.00 36.56 4.58
2973 4116 6.876804 TCGCTTAATTGTTGATACATCATCG 58.123 36.000 0.00 0.00 36.56 3.84
2974 4117 8.285394 ACATCGCTTAATTGTTGATACATCATC 58.715 33.333 0.00 0.00 36.56 2.92
2975 4118 8.158169 ACATCGCTTAATTGTTGATACATCAT 57.842 30.769 0.00 0.00 36.56 2.45
2976 4119 7.552458 ACATCGCTTAATTGTTGATACATCA 57.448 32.000 0.00 0.00 33.44 3.07
2977 4120 8.765219 ACTACATCGCTTAATTGTTGATACATC 58.235 33.333 0.00 0.00 33.44 3.06
2978 4121 8.662781 ACTACATCGCTTAATTGTTGATACAT 57.337 30.769 0.00 0.00 33.44 2.29
2984 4127 6.964934 GGGTTAACTACATCGCTTAATTGTTG 59.035 38.462 5.42 0.00 0.00 3.33
2985 4128 6.094464 GGGGTTAACTACATCGCTTAATTGTT 59.906 38.462 5.42 0.00 0.00 2.83
2986 4129 5.587443 GGGGTTAACTACATCGCTTAATTGT 59.413 40.000 5.42 0.00 0.00 2.71
2987 4130 5.820947 AGGGGTTAACTACATCGCTTAATTG 59.179 40.000 5.42 0.00 0.00 2.32
2988 4131 5.820947 CAGGGGTTAACTACATCGCTTAATT 59.179 40.000 5.42 0.00 0.00 1.40
2989 4132 5.104652 ACAGGGGTTAACTACATCGCTTAAT 60.105 40.000 5.42 0.00 0.00 1.40
2991 4134 3.770933 ACAGGGGTTAACTACATCGCTTA 59.229 43.478 5.42 0.00 0.00 3.09
2992 4135 2.570302 ACAGGGGTTAACTACATCGCTT 59.430 45.455 5.42 0.00 0.00 4.68
2995 4138 4.317671 CCTACAGGGGTTAACTACATCG 57.682 50.000 5.42 0.00 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.