Multiple sequence alignment - TraesCS2B01G070500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G070500 chr2B 100.000 4832 0 0 1 4832 37345647 37350478 0.000000e+00 8924.0
1 TraesCS2B01G070500 chr2B 92.697 849 49 2 3997 4832 37177712 37178560 0.000000e+00 1212.0
2 TraesCS2B01G070500 chr2B 92.697 849 48 6 3997 4832 37294337 37295184 0.000000e+00 1212.0
3 TraesCS2B01G070500 chr2B 91.837 833 40 17 4013 4832 37102349 37103166 0.000000e+00 1136.0
4 TraesCS2B01G070500 chr2B 88.942 841 79 11 3192 4028 37081117 37081947 0.000000e+00 1026.0
5 TraesCS2B01G070500 chr2B 98.776 490 6 0 4109 4598 37413575 37413086 0.000000e+00 872.0
6 TraesCS2B01G070500 chr2B 80.589 917 160 11 992 1896 1800236 1799326 0.000000e+00 691.0
7 TraesCS2B01G070500 chr2B 86.806 144 14 3 664 806 37346065 37346204 6.480000e-34 156.0
8 TraesCS2B01G070500 chr2B 86.806 144 14 3 419 558 37346310 37346452 6.480000e-34 156.0
9 TraesCS2B01G070500 chr2B 77.193 114 22 4 1197 1308 4472967 4472856 4.040000e-06 63.9
10 TraesCS2B01G070500 chr2D 86.253 2175 220 36 2132 4243 23179070 23176912 0.000000e+00 2287.0
11 TraesCS2B01G070500 chr2D 93.350 1173 70 4 913 2078 23180245 23179074 0.000000e+00 1727.0
12 TraesCS2B01G070500 chr2D 74.827 1299 216 71 1964 3193 30359290 30360546 7.270000e-133 484.0
13 TraesCS2B01G070500 chr2D 91.503 306 25 1 4235 4539 23175452 23175147 2.080000e-113 420.0
14 TraesCS2B01G070500 chr2D 77.339 481 87 14 2386 2847 114542372 114542849 1.030000e-66 265.0
15 TraesCS2B01G070500 chr2D 88.462 208 22 2 54 260 23181562 23181356 2.890000e-62 250.0
16 TraesCS2B01G070500 chr2D 81.672 311 29 9 277 575 23181126 23180832 2.910000e-57 233.0
17 TraesCS2B01G070500 chr2D 88.983 118 8 3 658 773 23180994 23180880 1.810000e-29 141.0
18 TraesCS2B01G070500 chr2D 85.714 126 18 0 4696 4821 23175138 23175013 3.030000e-27 134.0
19 TraesCS2B01G070500 chr2D 83.193 119 18 2 4330 4447 23337712 23337595 1.840000e-19 108.0
20 TraesCS2B01G070500 chr3D 77.459 905 138 37 1962 2827 572183573 572184450 9.410000e-132 481.0
21 TraesCS2B01G070500 chr3D 80.753 239 38 8 2960 3196 397366321 397366089 3.840000e-41 180.0
22 TraesCS2B01G070500 chr6B 77.371 875 145 36 2362 3198 679291502 679292361 2.040000e-128 470.0
23 TraesCS2B01G070500 chr6B 74.725 910 155 42 1964 2816 662817312 662816421 2.150000e-88 337.0
24 TraesCS2B01G070500 chr6A 76.458 943 144 42 1967 2871 444690050 444690952 1.600000e-119 440.0
25 TraesCS2B01G070500 chr3A 76.404 890 159 38 2007 2860 120691867 120690993 2.670000e-117 433.0
26 TraesCS2B01G070500 chr6D 75.540 879 151 40 1964 2812 410409446 410410290 1.640000e-99 374.0
27 TraesCS2B01G070500 chr6D 83.065 248 31 10 2950 3196 437932521 437932284 1.050000e-51 215.0
28 TraesCS2B01G070500 chr6D 83.636 220 27 6 2977 3196 373801081 373800871 1.060000e-46 198.0
29 TraesCS2B01G070500 chr6D 74.785 349 81 7 1098 1444 142989974 142989631 3.010000e-32 150.0
30 TraesCS2B01G070500 chr1D 76.377 817 115 43 2054 2834 443741639 443740865 7.640000e-98 368.0
31 TraesCS2B01G070500 chr1D 73.067 802 153 42 1964 2723 401437489 401438269 4.870000e-55 226.0
32 TraesCS2B01G070500 chr5B 73.588 1204 208 75 2054 3196 256051675 256050521 1.280000e-95 361.0
33 TraesCS2B01G070500 chr5B 79.137 139 21 6 1962 2093 644464475 644464612 6.660000e-14 89.8
34 TraesCS2B01G070500 chr7D 73.494 1162 219 59 2072 3196 421102635 421103744 1.650000e-94 357.0
35 TraesCS2B01G070500 chr7B 80.157 383 54 12 2832 3198 60718658 60718282 2.870000e-67 267.0
36 TraesCS2B01G070500 chr7B 83.083 266 32 10 2932 3196 684159075 684159328 3.760000e-56 230.0
37 TraesCS2B01G070500 chr4D 80.274 365 54 13 2021 2377 418493446 418493092 4.800000e-65 259.0
38 TraesCS2B01G070500 chrUn 72.172 884 187 41 1962 2809 40898525 40899385 1.050000e-51 215.0
39 TraesCS2B01G070500 chrUn 72.172 884 187 41 1962 2809 333714336 333713476 1.050000e-51 215.0
40 TraesCS2B01G070500 chrUn 80.645 93 18 0 3626 3718 38669618 38669526 6.710000e-09 73.1
41 TraesCS2B01G070500 chr4A 75.650 423 82 14 2422 2827 568189967 568190385 1.780000e-44 191.0
42 TraesCS2B01G070500 chr1A 72.208 806 154 44 1964 2723 497348023 497348804 2.970000e-42 183.0
43 TraesCS2B01G070500 chr5A 83.333 198 26 7 3001 3196 309959667 309959475 4.970000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G070500 chr2B 37345647 37350478 4831 False 8924.000000 8924 100.000 1 4832 1 chr2B.!!$F5 4831
1 TraesCS2B01G070500 chr2B 37177712 37178560 848 False 1212.000000 1212 92.697 3997 4832 1 chr2B.!!$F3 835
2 TraesCS2B01G070500 chr2B 37294337 37295184 847 False 1212.000000 1212 92.697 3997 4832 1 chr2B.!!$F4 835
3 TraesCS2B01G070500 chr2B 37102349 37103166 817 False 1136.000000 1136 91.837 4013 4832 1 chr2B.!!$F2 819
4 TraesCS2B01G070500 chr2B 37081117 37081947 830 False 1026.000000 1026 88.942 3192 4028 1 chr2B.!!$F1 836
5 TraesCS2B01G070500 chr2B 1799326 1800236 910 True 691.000000 691 80.589 992 1896 1 chr2B.!!$R1 904
6 TraesCS2B01G070500 chr2D 23175013 23181562 6549 True 741.714286 2287 87.991 54 4821 7 chr2D.!!$R2 4767
7 TraesCS2B01G070500 chr2D 30359290 30360546 1256 False 484.000000 484 74.827 1964 3193 1 chr2D.!!$F1 1229
8 TraesCS2B01G070500 chr3D 572183573 572184450 877 False 481.000000 481 77.459 1962 2827 1 chr3D.!!$F1 865
9 TraesCS2B01G070500 chr6B 679291502 679292361 859 False 470.000000 470 77.371 2362 3198 1 chr6B.!!$F1 836
10 TraesCS2B01G070500 chr6B 662816421 662817312 891 True 337.000000 337 74.725 1964 2816 1 chr6B.!!$R1 852
11 TraesCS2B01G070500 chr6A 444690050 444690952 902 False 440.000000 440 76.458 1967 2871 1 chr6A.!!$F1 904
12 TraesCS2B01G070500 chr3A 120690993 120691867 874 True 433.000000 433 76.404 2007 2860 1 chr3A.!!$R1 853
13 TraesCS2B01G070500 chr6D 410409446 410410290 844 False 374.000000 374 75.540 1964 2812 1 chr6D.!!$F1 848
14 TraesCS2B01G070500 chr1D 443740865 443741639 774 True 368.000000 368 76.377 2054 2834 1 chr1D.!!$R1 780
15 TraesCS2B01G070500 chr1D 401437489 401438269 780 False 226.000000 226 73.067 1964 2723 1 chr1D.!!$F1 759
16 TraesCS2B01G070500 chr5B 256050521 256051675 1154 True 361.000000 361 73.588 2054 3196 1 chr5B.!!$R1 1142
17 TraesCS2B01G070500 chr7D 421102635 421103744 1109 False 357.000000 357 73.494 2072 3196 1 chr7D.!!$F1 1124
18 TraesCS2B01G070500 chrUn 40898525 40899385 860 False 215.000000 215 72.172 1962 2809 1 chrUn.!!$F1 847
19 TraesCS2B01G070500 chrUn 333713476 333714336 860 True 215.000000 215 72.172 1962 2809 1 chrUn.!!$R2 847

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
502 723 0.107017 ACTGCTCAATAATGGCGGCT 60.107 50.0 11.43 0.0 34.40 5.52 F
535 761 0.172803 ATGACGTGACGGCCTAGTTC 59.827 55.0 8.97 0.0 31.60 3.01 F
2356 3112 0.179043 CGTCGATCTCCTCCTCCTCA 60.179 60.0 0.00 0.0 0.00 3.86 F
2878 3716 0.179121 GACATGACCCGCATACGTGA 60.179 55.0 0.00 0.0 34.82 4.35 F
2882 3720 0.179121 TGACCCGCATACGTGATGTC 60.179 55.0 0.00 0.0 37.90 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1333 1948 0.107017 CCCTCCGAGCCATCAACAAT 60.107 55.000 0.00 0.0 0.00 2.71 R
2473 3250 1.139058 GCCTACATGAATGACCTCCGT 59.861 52.381 0.00 0.0 0.00 4.69 R
3546 4402 0.034670 GCATGAACTCCTCTGGCCTT 60.035 55.000 3.32 0.0 0.00 4.35 R
3795 4652 0.107831 CAACCGGGACAACCAGAAGA 59.892 55.000 6.32 0.0 40.22 2.87 R
4810 7163 0.173481 GCAGTGTGCAGTCTCGGATA 59.827 55.000 0.00 0.0 44.26 2.59 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 9.460019 TGTTAGATGTGAACATTTCAATATCCA 57.540 29.630 0.00 0.00 42.15 3.41
47 48 8.756486 AGATGTGAACATTTCAATATCCATGA 57.244 30.769 0.00 0.00 42.15 3.07
48 49 9.192642 AGATGTGAACATTTCAATATCCATGAA 57.807 29.630 0.00 0.00 42.15 2.57
49 50 9.976511 GATGTGAACATTTCAATATCCATGAAT 57.023 29.630 0.00 0.00 42.15 2.57
50 51 9.758651 ATGTGAACATTTCAATATCCATGAATG 57.241 29.630 0.00 0.00 42.15 2.67
51 52 7.707464 TGTGAACATTTCAATATCCATGAATGC 59.293 33.333 0.00 0.00 42.15 3.56
52 53 7.707464 GTGAACATTTCAATATCCATGAATGCA 59.293 33.333 0.00 0.00 42.15 3.96
75 76 9.571816 TGCATTATGAATTATGTTACCATCAGA 57.428 29.630 0.00 0.00 32.29 3.27
104 105 7.599630 AAAAATGCAATGCAATTACGAGATT 57.400 28.000 13.45 0.00 43.62 2.40
135 136 8.592809 TGAATATGTGTATGTGCCTATGTGATA 58.407 33.333 0.00 0.00 0.00 2.15
164 165 8.298729 AGATAGTGTGTGTTATCTCTGATCAA 57.701 34.615 0.00 0.00 32.55 2.57
174 175 7.279536 GTGTTATCTCTGATCAATTGCTGAGAA 59.720 37.037 19.17 10.77 40.74 2.87
176 177 6.869315 ATCTCTGATCAATTGCTGAGAATG 57.131 37.500 19.17 3.74 40.74 2.67
180 181 6.120220 TCTGATCAATTGCTGAGAATGTGAT 58.880 36.000 0.00 0.00 37.52 3.06
214 215 4.081862 TCTGTCACGTAAGGATAAAGGGTG 60.082 45.833 0.00 0.00 46.39 4.61
219 220 5.050490 CACGTAAGGATAAAGGGTGAGATG 58.950 45.833 0.00 0.00 46.39 2.90
225 226 7.510675 AAGGATAAAGGGTGAGATGTAAGAA 57.489 36.000 0.00 0.00 0.00 2.52
233 234 5.014123 AGGGTGAGATGTAAGAATTGACCAA 59.986 40.000 0.00 0.00 0.00 3.67
290 504 1.872952 CTCAACAATCAGACACCGCAA 59.127 47.619 0.00 0.00 0.00 4.85
295 509 3.067106 ACAATCAGACACCGCAAGTTAG 58.933 45.455 0.00 0.00 0.00 2.34
308 522 5.048294 ACCGCAAGTTAGGTTATTGGAAAAG 60.048 40.000 0.00 0.00 37.49 2.27
309 523 5.399013 CGCAAGTTAGGTTATTGGAAAAGG 58.601 41.667 0.00 0.00 0.00 3.11
326 540 5.009610 GGAAAAGGTCAAAGACAGCAATACA 59.990 40.000 0.00 0.00 33.68 2.29
359 573 7.961326 ACTTTAGGCAACCATTAGATTTGAT 57.039 32.000 0.00 0.00 37.17 2.57
403 624 2.151202 TCCAAAAGAATCAGTCGGTGC 58.849 47.619 0.00 0.00 0.00 5.01
407 628 4.155826 CCAAAAGAATCAGTCGGTGCAATA 59.844 41.667 0.00 0.00 0.00 1.90
408 629 5.327091 CAAAAGAATCAGTCGGTGCAATAG 58.673 41.667 0.00 0.00 0.00 1.73
409 630 3.895232 AGAATCAGTCGGTGCAATAGT 57.105 42.857 0.00 0.00 0.00 2.12
411 632 3.935203 AGAATCAGTCGGTGCAATAGTTG 59.065 43.478 0.00 0.00 0.00 3.16
412 633 2.093306 TCAGTCGGTGCAATAGTTGG 57.907 50.000 0.00 0.00 0.00 3.77
413 634 1.086696 CAGTCGGTGCAATAGTTGGG 58.913 55.000 0.00 0.00 0.00 4.12
414 635 0.981183 AGTCGGTGCAATAGTTGGGA 59.019 50.000 0.00 0.00 0.00 4.37
415 636 1.349688 AGTCGGTGCAATAGTTGGGAA 59.650 47.619 0.00 0.00 0.00 3.97
416 637 2.156098 GTCGGTGCAATAGTTGGGAAA 58.844 47.619 0.00 0.00 0.00 3.13
417 638 2.161609 GTCGGTGCAATAGTTGGGAAAG 59.838 50.000 0.00 0.00 0.00 2.62
418 639 2.159382 CGGTGCAATAGTTGGGAAAGT 58.841 47.619 0.00 0.00 0.00 2.66
419 640 2.161609 CGGTGCAATAGTTGGGAAAGTC 59.838 50.000 0.00 0.00 0.00 3.01
420 641 2.492088 GGTGCAATAGTTGGGAAAGTCC 59.508 50.000 0.00 0.00 35.23 3.85
421 642 3.421844 GTGCAATAGTTGGGAAAGTCCT 58.578 45.455 0.00 0.00 36.57 3.85
422 643 3.440522 GTGCAATAGTTGGGAAAGTCCTC 59.559 47.826 0.00 0.00 36.57 3.71
446 667 3.386768 TCACTGAGCAGAACCAAGTAC 57.613 47.619 4.21 0.00 0.00 2.73
449 670 2.700897 ACTGAGCAGAACCAAGTACACT 59.299 45.455 4.21 0.00 0.00 3.55
502 723 0.107017 ACTGCTCAATAATGGCGGCT 60.107 50.000 11.43 0.00 34.40 5.52
504 725 1.008079 GCTCAATAATGGCGGCTGC 60.008 57.895 9.72 9.72 41.71 5.25
507 730 0.740149 TCAATAATGGCGGCTGCTTG 59.260 50.000 18.85 13.52 42.25 4.01
512 735 0.965439 AATGGCGGCTGCTTGTAAAA 59.035 45.000 18.85 0.00 42.25 1.52
521 744 4.495472 CGGCTGCTTGTAAAATAAATGACG 59.505 41.667 0.00 0.00 0.00 4.35
523 746 5.286082 GGCTGCTTGTAAAATAAATGACGTG 59.714 40.000 0.00 0.00 0.00 4.49
534 760 0.606604 AATGACGTGACGGCCTAGTT 59.393 50.000 8.97 0.00 31.60 2.24
535 761 0.172803 ATGACGTGACGGCCTAGTTC 59.827 55.000 8.97 0.00 31.60 3.01
536 762 1.513586 GACGTGACGGCCTAGTTCG 60.514 63.158 10.66 4.64 0.00 3.95
537 763 2.192608 GACGTGACGGCCTAGTTCGT 62.193 60.000 10.66 7.82 42.67 3.85
545 771 1.079503 GGCCTAGTTCGTCAAAGCTG 58.920 55.000 0.00 0.00 0.00 4.24
548 774 2.349886 GCCTAGTTCGTCAAAGCTGATG 59.650 50.000 0.00 0.00 39.58 3.07
552 778 1.532868 GTTCGTCAAAGCTGATGTGCT 59.467 47.619 0.00 0.00 46.40 4.40
583 809 5.272283 GCTATAGCAAACTACCCAGTACA 57.728 43.478 20.01 0.00 41.59 2.90
584 810 5.855045 GCTATAGCAAACTACCCAGTACAT 58.145 41.667 20.01 0.00 41.59 2.29
585 811 5.696724 GCTATAGCAAACTACCCAGTACATG 59.303 44.000 20.01 0.00 41.59 3.21
586 812 5.950544 ATAGCAAACTACCCAGTACATGA 57.049 39.130 0.00 0.00 33.48 3.07
587 813 4.844349 AGCAAACTACCCAGTACATGAT 57.156 40.909 0.00 0.00 33.48 2.45
588 814 4.517285 AGCAAACTACCCAGTACATGATG 58.483 43.478 0.00 0.00 33.48 3.07
592 818 3.107601 ACTACCCAGTACATGATGTGCT 58.892 45.455 10.46 10.46 44.11 4.40
597 823 1.583556 AGTACATGATGTGCTGGGGA 58.416 50.000 15.36 0.00 41.73 4.81
598 824 2.130193 AGTACATGATGTGCTGGGGAT 58.870 47.619 15.36 0.00 41.73 3.85
599 825 2.511218 AGTACATGATGTGCTGGGGATT 59.489 45.455 15.36 0.00 41.73 3.01
601 827 2.823959 ACATGATGTGCTGGGGATTTT 58.176 42.857 0.00 0.00 0.00 1.82
602 828 3.979911 ACATGATGTGCTGGGGATTTTA 58.020 40.909 0.00 0.00 0.00 1.52
603 829 4.549668 ACATGATGTGCTGGGGATTTTAT 58.450 39.130 0.00 0.00 0.00 1.40
604 830 5.704354 ACATGATGTGCTGGGGATTTTATA 58.296 37.500 0.00 0.00 0.00 0.98
607 833 7.613022 ACATGATGTGCTGGGGATTTTATATAG 59.387 37.037 0.00 0.00 0.00 1.31
609 835 8.213489 TGATGTGCTGGGGATTTTATATAGTA 57.787 34.615 0.00 0.00 0.00 1.82
610 836 8.835734 TGATGTGCTGGGGATTTTATATAGTAT 58.164 33.333 0.00 0.00 0.00 2.12
638 864 9.084164 TCATCTATTTAGACGTTTTTAGAGTGC 57.916 33.333 0.00 0.00 34.72 4.40
639 865 8.869897 CATCTATTTAGACGTTTTTAGAGTGCA 58.130 33.333 0.00 0.00 34.72 4.57
641 867 9.431887 TCTATTTAGACGTTTTTAGAGTGCAAT 57.568 29.630 0.00 0.00 0.00 3.56
642 868 9.478019 CTATTTAGACGTTTTTAGAGTGCAATG 57.522 33.333 0.00 0.00 0.00 2.82
643 869 4.749245 AGACGTTTTTAGAGTGCAATGG 57.251 40.909 0.00 0.00 0.00 3.16
644 870 4.134563 AGACGTTTTTAGAGTGCAATGGT 58.865 39.130 0.00 0.00 0.00 3.55
646 872 4.606961 ACGTTTTTAGAGTGCAATGGTTG 58.393 39.130 0.00 0.00 0.00 3.77
647 873 3.980775 CGTTTTTAGAGTGCAATGGTTGG 59.019 43.478 0.00 0.00 0.00 3.77
648 874 4.306600 GTTTTTAGAGTGCAATGGTTGGG 58.693 43.478 0.00 0.00 0.00 4.12
649 875 3.517296 TTTAGAGTGCAATGGTTGGGA 57.483 42.857 0.00 0.00 0.00 4.37
652 878 2.242043 AGAGTGCAATGGTTGGGAAAG 58.758 47.619 0.00 0.00 0.00 2.62
653 879 1.963515 GAGTGCAATGGTTGGGAAAGT 59.036 47.619 0.00 0.00 0.00 2.66
654 880 1.963515 AGTGCAATGGTTGGGAAAGTC 59.036 47.619 0.00 0.00 0.00 3.01
655 881 1.000843 GTGCAATGGTTGGGAAAGTCC 59.999 52.381 0.00 0.00 35.23 3.85
656 882 1.337118 GCAATGGTTGGGAAAGTCCA 58.663 50.000 0.00 0.00 38.64 4.02
657 883 1.000843 GCAATGGTTGGGAAAGTCCAC 59.999 52.381 0.00 0.00 38.64 4.02
659 885 0.856982 ATGGTTGGGAAAGTCCACCA 59.143 50.000 8.49 8.49 38.64 4.17
660 886 0.631753 TGGTTGGGAAAGTCCACCAA 59.368 50.000 4.43 0.00 41.66 3.67
661 887 1.219213 TGGTTGGGAAAGTCCACCAAT 59.781 47.619 4.43 0.00 45.14 3.16
663 889 2.703536 GGTTGGGAAAGTCCACCAATTT 59.296 45.455 0.00 0.00 45.14 1.82
668 894 3.767711 GGAAAGTCCACCAATTTCCTCT 58.232 45.455 8.35 0.00 45.57 3.69
670 896 4.588951 GGAAAGTCCACCAATTTCCTCTTT 59.411 41.667 8.35 0.00 45.57 2.52
671 897 5.070446 GGAAAGTCCACCAATTTCCTCTTTT 59.930 40.000 8.35 0.00 45.57 2.27
672 898 5.791336 AAGTCCACCAATTTCCTCTTTTC 57.209 39.130 0.00 0.00 0.00 2.29
673 899 4.803452 AGTCCACCAATTTCCTCTTTTCA 58.197 39.130 0.00 0.00 0.00 2.69
674 900 4.584743 AGTCCACCAATTTCCTCTTTTCAC 59.415 41.667 0.00 0.00 0.00 3.18
675 901 4.584743 GTCCACCAATTTCCTCTTTTCACT 59.415 41.667 0.00 0.00 0.00 3.41
677 903 4.584325 CCACCAATTTCCTCTTTTCACTGA 59.416 41.667 0.00 0.00 0.00 3.41
678 904 5.278660 CCACCAATTTCCTCTTTTCACTGAG 60.279 44.000 0.00 0.00 0.00 3.35
679 905 4.279420 ACCAATTTCCTCTTTTCACTGAGC 59.721 41.667 0.00 0.00 0.00 4.26
681 907 5.221303 CCAATTTCCTCTTTTCACTGAGCAA 60.221 40.000 0.00 0.00 0.00 3.91
682 908 6.275335 CAATTTCCTCTTTTCACTGAGCAAA 58.725 36.000 0.00 0.00 0.00 3.68
685 911 2.951642 CCTCTTTTCACTGAGCAAACCA 59.048 45.455 0.00 0.00 0.00 3.67
686 912 3.381272 CCTCTTTTCACTGAGCAAACCAA 59.619 43.478 0.00 0.00 0.00 3.67
688 914 2.869233 TTTCACTGAGCAAACCAAGC 57.131 45.000 0.00 0.00 0.00 4.01
689 915 1.761449 TTCACTGAGCAAACCAAGCA 58.239 45.000 0.00 0.00 0.00 3.91
690 916 1.761449 TCACTGAGCAAACCAAGCAA 58.239 45.000 0.00 0.00 0.00 3.91
691 917 2.098614 TCACTGAGCAAACCAAGCAAA 58.901 42.857 0.00 0.00 0.00 3.68
692 918 2.159254 TCACTGAGCAAACCAAGCAAAC 60.159 45.455 0.00 0.00 0.00 2.93
693 919 1.824230 ACTGAGCAAACCAAGCAAACA 59.176 42.857 0.00 0.00 0.00 2.83
694 920 2.159198 ACTGAGCAAACCAAGCAAACAG 60.159 45.455 0.00 0.00 36.64 3.16
695 921 2.098614 TGAGCAAACCAAGCAAACAGA 58.901 42.857 0.00 0.00 0.00 3.41
697 923 3.054878 GAGCAAACCAAGCAAACAGATG 58.945 45.455 0.00 0.00 0.00 2.90
698 924 2.137523 GCAAACCAAGCAAACAGATGG 58.862 47.619 0.00 0.00 38.91 3.51
699 925 2.224018 GCAAACCAAGCAAACAGATGGA 60.224 45.455 0.00 0.00 36.75 3.41
700 926 3.740764 GCAAACCAAGCAAACAGATGGAA 60.741 43.478 0.00 0.00 36.75 3.53
701 927 4.634199 CAAACCAAGCAAACAGATGGAAT 58.366 39.130 0.00 0.00 36.75 3.01
702 928 4.961438 AACCAAGCAAACAGATGGAATT 57.039 36.364 0.00 0.00 36.75 2.17
703 929 6.222389 CAAACCAAGCAAACAGATGGAATTA 58.778 36.000 0.00 0.00 36.75 1.40
704 930 6.418057 AACCAAGCAAACAGATGGAATTAA 57.582 33.333 0.00 0.00 36.75 1.40
705 931 5.783111 ACCAAGCAAACAGATGGAATTAAC 58.217 37.500 0.00 0.00 36.75 2.01
706 932 5.539955 ACCAAGCAAACAGATGGAATTAACT 59.460 36.000 0.00 0.00 36.75 2.24
707 933 6.719370 ACCAAGCAAACAGATGGAATTAACTA 59.281 34.615 0.00 0.00 36.75 2.24
708 934 7.232534 ACCAAGCAAACAGATGGAATTAACTAA 59.767 33.333 0.00 0.00 36.75 2.24
709 935 8.253113 CCAAGCAAACAGATGGAATTAACTAAT 58.747 33.333 0.00 0.00 34.82 1.73
744 970 9.601217 AAAGTAATTAGTACTGCTCAGTATTGG 57.399 33.333 12.29 0.00 42.55 3.16
745 971 7.210873 AGTAATTAGTACTGCTCAGTATTGGC 58.789 38.462 12.29 1.12 44.73 4.52
746 972 2.586258 AGTACTGCTCAGTATTGGCG 57.414 50.000 12.29 0.00 44.73 5.69
747 973 1.137086 AGTACTGCTCAGTATTGGCGG 59.863 52.381 12.29 6.14 44.73 6.13
748 974 0.179084 TACTGCTCAGTATTGGCGGC 60.179 55.000 0.00 0.00 42.54 6.53
749 975 1.450134 CTGCTCAGTATTGGCGGCA 60.450 57.895 7.97 7.97 0.00 5.69
750 976 1.434622 CTGCTCAGTATTGGCGGCAG 61.435 60.000 12.87 0.00 36.92 4.85
751 977 1.450312 GCTCAGTATTGGCGGCAGT 60.450 57.895 12.87 12.69 0.00 4.40
752 978 1.026718 GCTCAGTATTGGCGGCAGTT 61.027 55.000 13.24 7.02 0.00 3.16
753 979 1.453155 CTCAGTATTGGCGGCAGTTT 58.547 50.000 13.24 4.32 0.00 2.66
754 980 1.812571 CTCAGTATTGGCGGCAGTTTT 59.187 47.619 13.24 1.68 0.00 2.43
755 981 1.539388 TCAGTATTGGCGGCAGTTTTG 59.461 47.619 13.24 11.37 0.00 2.44
756 982 1.269448 CAGTATTGGCGGCAGTTTTGT 59.731 47.619 13.24 0.00 0.00 2.83
757 983 2.486203 CAGTATTGGCGGCAGTTTTGTA 59.514 45.455 13.24 0.00 0.00 2.41
758 984 3.057876 CAGTATTGGCGGCAGTTTTGTAA 60.058 43.478 13.24 0.00 0.00 2.41
759 985 3.570550 AGTATTGGCGGCAGTTTTGTAAA 59.429 39.130 13.24 0.00 0.00 2.01
760 986 2.211353 TTGGCGGCAGTTTTGTAAAC 57.789 45.000 12.87 0.00 0.00 2.01
761 987 1.394618 TGGCGGCAGTTTTGTAAACT 58.605 45.000 7.97 0.00 0.00 2.66
762 988 2.573369 TGGCGGCAGTTTTGTAAACTA 58.427 42.857 7.97 0.00 0.00 2.24
763 989 2.950309 TGGCGGCAGTTTTGTAAACTAA 59.050 40.909 7.97 0.00 0.00 2.24
764 990 3.380637 TGGCGGCAGTTTTGTAAACTAAA 59.619 39.130 7.97 0.00 0.00 1.85
765 991 4.038162 TGGCGGCAGTTTTGTAAACTAAAT 59.962 37.500 7.97 0.00 0.00 1.40
766 992 4.384547 GGCGGCAGTTTTGTAAACTAAATG 59.615 41.667 3.07 0.00 0.00 2.32
767 993 5.216648 GCGGCAGTTTTGTAAACTAAATGA 58.783 37.500 4.64 0.00 0.00 2.57
768 994 5.116528 GCGGCAGTTTTGTAAACTAAATGAC 59.883 40.000 4.64 0.00 0.00 3.06
769 995 5.338559 CGGCAGTTTTGTAAACTAAATGACG 59.661 40.000 4.64 8.83 31.34 4.35
770 996 6.203647 GGCAGTTTTGTAAACTAAATGACGT 58.796 36.000 4.64 0.00 0.00 4.34
771 997 7.354257 GGCAGTTTTGTAAACTAAATGACGTA 58.646 34.615 4.64 0.00 0.00 3.57
772 998 7.856894 GGCAGTTTTGTAAACTAAATGACGTAA 59.143 33.333 4.64 0.00 0.00 3.18
773 999 8.675888 GCAGTTTTGTAAACTAAATGACGTAAC 58.324 33.333 4.64 0.00 0.00 2.50
774 1000 8.875444 CAGTTTTGTAAACTAAATGACGTAACG 58.125 33.333 4.64 0.00 0.00 3.18
775 1001 8.063630 AGTTTTGTAAACTAAATGACGTAACGG 58.936 33.333 3.13 0.00 0.00 4.44
776 1002 5.514059 TGTAAACTAAATGACGTAACGGC 57.486 39.130 0.00 0.00 34.27 5.68
777 1003 4.388469 TGTAAACTAAATGACGTAACGGCC 59.612 41.667 0.00 0.00 31.60 6.13
778 1004 2.747396 ACTAAATGACGTAACGGCCA 57.253 45.000 2.24 0.00 31.60 5.36
779 1005 3.042871 ACTAAATGACGTAACGGCCAA 57.957 42.857 2.24 0.00 31.60 4.52
780 1006 2.997986 ACTAAATGACGTAACGGCCAAG 59.002 45.455 2.24 0.00 31.60 3.61
781 1007 1.886886 AAATGACGTAACGGCCAAGT 58.113 45.000 2.24 0.00 31.60 3.16
782 1008 1.886886 AATGACGTAACGGCCAAGTT 58.113 45.000 2.24 1.78 31.60 2.66
783 1009 1.435577 ATGACGTAACGGCCAAGTTC 58.564 50.000 2.24 0.00 31.60 3.01
784 1010 0.940519 TGACGTAACGGCCAAGTTCG 60.941 55.000 2.24 8.40 31.60 3.95
785 1011 0.940991 GACGTAACGGCCAAGTTCGT 60.941 55.000 2.24 11.37 41.71 3.85
786 1012 0.940991 ACGTAACGGCCAAGTTCGTC 60.941 55.000 2.24 0.00 38.78 4.20
787 1013 0.940519 CGTAACGGCCAAGTTCGTCA 60.941 55.000 2.24 0.00 38.78 4.35
788 1014 1.219646 GTAACGGCCAAGTTCGTCAA 58.780 50.000 2.24 0.00 38.78 3.18
789 1015 1.802365 GTAACGGCCAAGTTCGTCAAT 59.198 47.619 2.24 0.00 38.78 2.57
790 1016 0.591170 AACGGCCAAGTTCGTCAATG 59.409 50.000 2.24 0.00 38.78 2.82
791 1017 1.154225 CGGCCAAGTTCGTCAATGC 60.154 57.895 2.24 0.00 0.00 3.56
792 1018 1.577328 CGGCCAAGTTCGTCAATGCT 61.577 55.000 2.24 0.00 0.00 3.79
793 1019 1.448985 GGCCAAGTTCGTCAATGCTA 58.551 50.000 0.00 0.00 0.00 3.49
794 1020 1.810151 GGCCAAGTTCGTCAATGCTAA 59.190 47.619 0.00 0.00 0.00 3.09
795 1021 2.423538 GGCCAAGTTCGTCAATGCTAAT 59.576 45.455 0.00 0.00 0.00 1.73
796 1022 3.119495 GGCCAAGTTCGTCAATGCTAATT 60.119 43.478 0.00 0.00 0.00 1.40
797 1023 4.485163 GCCAAGTTCGTCAATGCTAATTT 58.515 39.130 0.00 0.00 0.00 1.82
798 1024 4.324402 GCCAAGTTCGTCAATGCTAATTTG 59.676 41.667 0.00 0.00 0.00 2.32
799 1025 4.324402 CCAAGTTCGTCAATGCTAATTTGC 59.676 41.667 4.83 4.83 0.00 3.68
800 1026 5.156355 CAAGTTCGTCAATGCTAATTTGCT 58.844 37.500 12.99 0.00 0.00 3.91
801 1027 4.726416 AGTTCGTCAATGCTAATTTGCTG 58.274 39.130 12.99 4.35 0.00 4.41
802 1028 4.455533 AGTTCGTCAATGCTAATTTGCTGA 59.544 37.500 12.99 6.58 0.00 4.26
803 1029 5.124457 AGTTCGTCAATGCTAATTTGCTGAT 59.876 36.000 12.99 0.00 0.00 2.90
804 1030 4.912214 TCGTCAATGCTAATTTGCTGATG 58.088 39.130 12.99 13.28 0.00 3.07
805 1031 4.039703 CGTCAATGCTAATTTGCTGATGG 58.960 43.478 12.99 0.00 0.00 3.51
806 1032 4.201940 CGTCAATGCTAATTTGCTGATGGA 60.202 41.667 12.99 0.00 0.00 3.41
807 1033 5.279384 GTCAATGCTAATTTGCTGATGGAG 58.721 41.667 12.99 0.00 0.00 3.86
808 1034 4.951715 TCAATGCTAATTTGCTGATGGAGT 59.048 37.500 12.99 0.00 0.00 3.85
809 1035 6.038603 GTCAATGCTAATTTGCTGATGGAGTA 59.961 38.462 12.99 0.00 0.00 2.59
810 1036 6.261603 TCAATGCTAATTTGCTGATGGAGTAG 59.738 38.462 12.99 0.00 0.00 2.57
811 1037 5.102953 TGCTAATTTGCTGATGGAGTAGT 57.897 39.130 12.99 0.00 0.00 2.73
812 1038 6.233905 TGCTAATTTGCTGATGGAGTAGTA 57.766 37.500 12.99 0.00 0.00 1.82
813 1039 6.049149 TGCTAATTTGCTGATGGAGTAGTAC 58.951 40.000 12.99 0.00 0.00 2.73
814 1040 6.127054 TGCTAATTTGCTGATGGAGTAGTACT 60.127 38.462 12.99 1.37 0.00 2.73
815 1041 7.069455 TGCTAATTTGCTGATGGAGTAGTACTA 59.931 37.037 12.99 0.00 0.00 1.82
816 1042 7.926555 GCTAATTTGCTGATGGAGTAGTACTAA 59.073 37.037 3.61 0.00 0.00 2.24
817 1043 9.469807 CTAATTTGCTGATGGAGTAGTACTAAG 57.530 37.037 3.61 0.00 0.00 2.18
818 1044 5.854010 TTGCTGATGGAGTAGTACTAAGG 57.146 43.478 3.61 0.00 0.00 2.69
819 1045 4.868268 TGCTGATGGAGTAGTACTAAGGT 58.132 43.478 3.61 0.00 0.00 3.50
820 1046 5.269991 TGCTGATGGAGTAGTACTAAGGTT 58.730 41.667 3.61 0.00 0.00 3.50
821 1047 5.720041 TGCTGATGGAGTAGTACTAAGGTTT 59.280 40.000 3.61 0.00 0.00 3.27
822 1048 6.043411 GCTGATGGAGTAGTACTAAGGTTTG 58.957 44.000 3.61 0.00 0.00 2.93
823 1049 6.540438 TGATGGAGTAGTACTAAGGTTTGG 57.460 41.667 3.61 0.00 0.00 3.28
824 1050 6.021030 TGATGGAGTAGTACTAAGGTTTGGT 58.979 40.000 3.61 0.00 0.00 3.67
825 1051 5.990120 TGGAGTAGTACTAAGGTTTGGTC 57.010 43.478 3.61 0.00 0.00 4.02
826 1052 5.396485 TGGAGTAGTACTAAGGTTTGGTCA 58.604 41.667 3.61 0.00 0.00 4.02
827 1053 6.021030 TGGAGTAGTACTAAGGTTTGGTCAT 58.979 40.000 3.61 0.00 0.00 3.06
828 1054 6.499350 TGGAGTAGTACTAAGGTTTGGTCATT 59.501 38.462 3.61 0.00 0.00 2.57
829 1055 6.817140 GGAGTAGTACTAAGGTTTGGTCATTG 59.183 42.308 3.61 0.00 0.00 2.82
830 1056 6.708285 AGTAGTACTAAGGTTTGGTCATTGG 58.292 40.000 3.61 0.00 0.00 3.16
831 1057 5.836024 AGTACTAAGGTTTGGTCATTGGA 57.164 39.130 0.00 0.00 0.00 3.53
832 1058 6.195600 AGTACTAAGGTTTGGTCATTGGAA 57.804 37.500 0.00 0.00 0.00 3.53
836 1062 9.016438 GTACTAAGGTTTGGTCATTGGAATTTA 57.984 33.333 0.00 0.00 0.00 1.40
837 1063 8.664669 ACTAAGGTTTGGTCATTGGAATTTAT 57.335 30.769 0.00 0.00 0.00 1.40
893 1488 4.096231 TGAATGCCACAAAAGTATCCATCG 59.904 41.667 0.00 0.00 0.00 3.84
904 1499 7.606456 ACAAAAGTATCCATCGTTGTCAACTAT 59.394 33.333 13.67 5.57 0.00 2.12
905 1500 7.539712 AAAGTATCCATCGTTGTCAACTATG 57.460 36.000 18.72 18.72 35.14 2.23
908 1503 7.148641 AGTATCCATCGTTGTCAACTATGATC 58.851 38.462 24.52 14.23 36.88 2.92
910 1505 5.351458 TCCATCGTTGTCAACTATGATCAG 58.649 41.667 24.52 12.36 36.88 2.90
911 1506 5.105351 TCCATCGTTGTCAACTATGATCAGT 60.105 40.000 24.52 0.00 36.88 3.41
942 1551 9.815306 ATAGCTCTGAACACTATATAGAAAGGA 57.185 33.333 16.79 5.93 0.00 3.36
945 1554 8.364142 GCTCTGAACACTATATAGAAAGGATGT 58.636 37.037 16.79 6.22 0.00 3.06
953 1562 8.735315 CACTATATAGAAAGGATGTGATCGAGT 58.265 37.037 16.79 0.00 0.00 4.18
954 1563 9.303116 ACTATATAGAAAGGATGTGATCGAGTT 57.697 33.333 16.79 0.00 0.00 3.01
966 1575 4.389992 TGTGATCGAGTTGCTTCTTTCATC 59.610 41.667 0.00 0.00 0.00 2.92
969 1578 3.589988 TCGAGTTGCTTCTTTCATCCTC 58.410 45.455 0.00 0.00 0.00 3.71
970 1579 3.006859 TCGAGTTGCTTCTTTCATCCTCA 59.993 43.478 0.00 0.00 0.00 3.86
972 1581 3.416156 AGTTGCTTCTTTCATCCTCACC 58.584 45.455 0.00 0.00 0.00 4.02
973 1582 3.149196 GTTGCTTCTTTCATCCTCACCA 58.851 45.455 0.00 0.00 0.00 4.17
974 1583 3.726557 TGCTTCTTTCATCCTCACCAT 57.273 42.857 0.00 0.00 0.00 3.55
975 1584 3.349927 TGCTTCTTTCATCCTCACCATG 58.650 45.455 0.00 0.00 0.00 3.66
981 1590 4.400251 TCTTTCATCCTCACCATGCAATTC 59.600 41.667 0.00 0.00 0.00 2.17
987 1596 3.055458 TCCTCACCATGCAATTCGAACTA 60.055 43.478 0.00 0.00 0.00 2.24
997 1606 3.365969 GCAATTCGAACTACACCCCAAAG 60.366 47.826 0.00 0.00 0.00 2.77
1005 1614 2.042979 ACTACACCCCAAAGCAATGGAT 59.957 45.455 9.22 0.00 43.54 3.41
1053 1668 3.106827 TGCACTTCTAGTCATCATCCCA 58.893 45.455 0.00 0.00 0.00 4.37
1054 1669 3.118629 TGCACTTCTAGTCATCATCCCAC 60.119 47.826 0.00 0.00 0.00 4.61
1059 1674 1.764723 CTAGTCATCATCCCACTGGCA 59.235 52.381 0.00 0.00 0.00 4.92
1088 1703 3.825160 TTTCAGCTCGCCGGCAAGT 62.825 57.895 28.98 5.35 34.17 3.16
1152 1767 0.604578 GCCACTTGCACCACATGATT 59.395 50.000 0.00 0.00 40.77 2.57
1174 1789 1.101049 CAAACTTCCGCACCACAGGT 61.101 55.000 0.00 0.00 35.62 4.00
1177 1792 1.525995 CTTCCGCACCACAGGTTGT 60.526 57.895 0.00 0.00 31.02 3.32
1197 1812 3.512516 GATCTTGCCCAGCGCCAC 61.513 66.667 2.29 0.00 36.24 5.01
1320 1935 3.790437 CGCCCCATCAGCAGGACT 61.790 66.667 0.00 0.00 0.00 3.85
1333 1948 3.036819 AGCAGGACTATGAAGCTGATCA 58.963 45.455 0.00 0.00 33.67 2.92
1341 1956 6.485984 GGACTATGAAGCTGATCATTGTTGAT 59.514 38.462 14.10 0.00 42.89 2.57
1419 2034 1.300971 TTTGCACCATCGAGCTGCTC 61.301 55.000 19.53 19.53 0.00 4.26
1545 2166 4.025730 GGCACACTATTGTCATCGTATGTG 60.026 45.833 0.00 0.00 39.32 3.21
1560 2181 3.181494 CGTATGTGAATGACTCCACGGTA 60.181 47.826 0.00 0.00 36.15 4.02
1578 2199 2.102588 GGTACGTGCCATGATAGGAAGT 59.897 50.000 18.66 0.00 0.00 3.01
1725 2346 0.809241 GGATGAAGCGGCAGAGTCAG 60.809 60.000 1.45 0.00 0.00 3.51
1812 2436 0.680061 AGGAGGACTTGGTTGACGTC 59.320 55.000 9.11 9.11 0.00 4.34
1852 2476 2.738846 CAAGATGACCACTTGGAGTTCG 59.261 50.000 1.14 0.00 40.39 3.95
1878 2502 2.358582 CACCACAGACAACATCAAAGCA 59.641 45.455 0.00 0.00 0.00 3.91
1914 2538 2.112380 ACGACCACATGCATCATGAA 57.888 45.000 13.11 0.00 43.81 2.57
1917 2541 2.876550 CGACCACATGCATCATGAATCT 59.123 45.455 13.11 0.00 43.81 2.40
1918 2542 3.059120 CGACCACATGCATCATGAATCTC 60.059 47.826 13.11 2.50 43.81 2.75
1935 2559 6.867550 TGAATCTCGAGTCATGACACTAAAT 58.132 36.000 27.02 12.00 29.72 1.40
1977 2601 2.354821 GGCACTAAGGGCATTTCTAACG 59.645 50.000 0.00 0.00 0.00 3.18
1983 2608 1.843851 AGGGCATTTCTAACGGATCCA 59.156 47.619 13.41 0.00 0.00 3.41
2079 2725 2.595238 GATCCCCTAAAGTAGCGGAGA 58.405 52.381 0.00 0.00 36.28 3.71
2094 2741 4.556233 AGCGGAGAAAAAGTAAATTTGCC 58.444 39.130 0.00 0.00 0.00 4.52
2139 2789 5.722263 TGAAAGGTCCATGCATTAAACATG 58.278 37.500 12.62 12.62 43.67 3.21
2304 3033 1.724929 GACCAGTGTCGTCGTCGTG 60.725 63.158 1.33 0.00 38.33 4.35
2356 3112 0.179043 CGTCGATCTCCTCCTCCTCA 60.179 60.000 0.00 0.00 0.00 3.86
2360 3116 1.703411 GATCTCCTCCTCCTCACCAG 58.297 60.000 0.00 0.00 0.00 4.00
2392 3169 2.041265 TCCTTGCCTCCCTCCTCC 59.959 66.667 0.00 0.00 0.00 4.30
2393 3170 2.285668 CCTTGCCTCCCTCCTCCA 60.286 66.667 0.00 0.00 0.00 3.86
2397 3174 3.003763 GCCTCCCTCCTCCACGTT 61.004 66.667 0.00 0.00 0.00 3.99
2407 3184 3.889538 CCTCCTCCACGTTAGATATGACA 59.110 47.826 0.00 0.00 0.00 3.58
2447 3224 0.819259 GGCAAATATCGCCTGCTCCA 60.819 55.000 8.53 0.00 46.56 3.86
2457 3234 1.687612 CCTGCTCCACCTCCACAAT 59.312 57.895 0.00 0.00 0.00 2.71
2473 3250 0.461548 CAATCTCTAGGTGCTGCCGA 59.538 55.000 0.00 0.00 43.70 5.54
2484 3261 2.579201 CTGCCGACGGAGGTCATT 59.421 61.111 20.50 0.00 43.61 2.57
2663 3474 2.441348 TACTCCATGGCCGCGAGA 60.441 61.111 8.23 2.89 0.00 4.04
2675 3486 2.483745 GCGAGATCGGTCGTGTCA 59.516 61.111 4.18 0.00 42.17 3.58
2734 3545 1.512926 GTGATCTCCACCACACACAC 58.487 55.000 0.00 0.00 39.86 3.82
2735 3546 1.127343 TGATCTCCACCACACACACA 58.873 50.000 0.00 0.00 0.00 3.72
2740 3551 2.518349 CACCACACACACACCCCC 60.518 66.667 0.00 0.00 0.00 5.40
2852 3690 4.069232 CGGTGGCTCGAGGAAGCA 62.069 66.667 15.58 0.00 44.35 3.91
2874 3712 4.027755 CGGACATGACCCGCATAC 57.972 61.111 15.76 0.00 40.54 2.39
2875 3713 1.949133 CGGACATGACCCGCATACG 60.949 63.158 15.76 0.00 40.54 3.06
2877 3715 1.151777 GGACATGACCCGCATACGTG 61.152 60.000 0.00 0.00 34.82 4.49
2878 3716 0.179121 GACATGACCCGCATACGTGA 60.179 55.000 0.00 0.00 34.82 4.35
2879 3717 0.464036 ACATGACCCGCATACGTGAT 59.536 50.000 0.00 0.00 34.82 3.06
2880 3718 0.861185 CATGACCCGCATACGTGATG 59.139 55.000 0.00 0.00 34.82 3.07
2881 3719 0.464036 ATGACCCGCATACGTGATGT 59.536 50.000 0.00 0.00 37.90 3.06
2882 3720 0.179121 TGACCCGCATACGTGATGTC 60.179 55.000 0.00 0.00 37.90 3.06
2883 3721 0.179121 GACCCGCATACGTGATGTCA 60.179 55.000 0.00 0.00 37.90 3.58
2892 3732 0.683179 ACGTGATGTCAGGGATCCGA 60.683 55.000 5.45 0.00 36.17 4.55
2898 3738 3.157252 TCAGGGATCCGAGCTGCC 61.157 66.667 5.45 0.00 0.00 4.85
2910 3750 4.373116 GCTGCCGGTCGTTGGAGA 62.373 66.667 1.90 0.00 0.00 3.71
2912 3752 4.373116 TGCCGGTCGTTGGAGAGC 62.373 66.667 1.90 0.00 35.48 4.09
2953 3793 1.004758 CATTGGGAGGAGAGGGGGA 59.995 63.158 0.00 0.00 0.00 4.81
2999 3852 0.399806 GGGGAGAAGAGGAGGCAGAT 60.400 60.000 0.00 0.00 0.00 2.90
3006 3859 0.636101 AGAGGAGGCAGATGAGAGGT 59.364 55.000 0.00 0.00 0.00 3.85
3007 3860 1.856259 AGAGGAGGCAGATGAGAGGTA 59.144 52.381 0.00 0.00 0.00 3.08
3008 3861 2.158475 AGAGGAGGCAGATGAGAGGTAG 60.158 54.545 0.00 0.00 0.00 3.18
3009 3862 1.856259 AGGAGGCAGATGAGAGGTAGA 59.144 52.381 0.00 0.00 0.00 2.59
3010 3863 2.158475 AGGAGGCAGATGAGAGGTAGAG 60.158 54.545 0.00 0.00 0.00 2.43
3014 3867 3.204158 AGGCAGATGAGAGGTAGAGAGAA 59.796 47.826 0.00 0.00 0.00 2.87
3019 3872 6.356556 CAGATGAGAGGTAGAGAGAAAGAGA 58.643 44.000 0.00 0.00 0.00 3.10
3144 3998 2.994578 GGTGCGACTTAGAGGAGAAAAC 59.005 50.000 0.00 0.00 0.00 2.43
3237 4093 4.214971 CAGGATATGTTCATTGCAGGTAGC 59.785 45.833 0.00 0.00 45.96 3.58
3291 4147 0.539051 CCGAGCTCATGAAGAACCCT 59.461 55.000 15.40 0.00 0.00 4.34
3382 4238 7.608376 AGGAGAGCTTGAGAAGTTTAAATTACC 59.392 37.037 0.00 0.00 0.00 2.85
3390 4246 6.775629 TGAGAAGTTTAAATTACCTGCACCTT 59.224 34.615 0.00 0.00 0.00 3.50
3476 4332 4.651778 GCACCATGCCAAATACTAGGATA 58.348 43.478 0.00 0.00 37.42 2.59
3546 4402 4.101585 AGCAGAGATTCGATACATTGGGAA 59.898 41.667 0.00 0.00 0.00 3.97
3567 4423 1.606531 GCCAGAGGAGTTCATGCCT 59.393 57.895 0.00 0.00 37.18 4.75
3675 4532 1.367471 GACCTTTGGGCTGGCAAAC 59.633 57.895 2.88 0.00 35.63 2.93
3764 4621 2.474816 GGACGTTGATATGACAGAGGC 58.525 52.381 0.00 0.00 0.00 4.70
3773 4630 1.336632 ATGACAGAGGCCCTGAGAGC 61.337 60.000 23.24 12.08 45.78 4.09
3794 4651 1.071567 GTCTCGAAGCGGAAAGACGG 61.072 60.000 0.00 0.00 0.00 4.79
3807 4664 2.528041 AAGACGGTCTTCTGGTTGTC 57.472 50.000 17.38 0.00 28.99 3.18
3817 4674 1.129917 TCTGGTTGTCCCGGTTGTTA 58.870 50.000 0.00 0.00 40.86 2.41
3835 4692 5.087391 TGTTAGCGTACCAATATGACCAA 57.913 39.130 0.00 0.00 0.00 3.67
3891 4748 6.058833 TGTTGCCTTTCTCATTTGTGTACTA 58.941 36.000 0.00 0.00 0.00 1.82
3892 4749 6.017440 TGTTGCCTTTCTCATTTGTGTACTAC 60.017 38.462 0.00 0.00 0.00 2.73
4006 4866 8.225603 TGAATTGAAATTAGACCTCCATTAGC 57.774 34.615 0.00 0.00 0.00 3.09
4011 4871 7.220030 TGAAATTAGACCTCCATTAGCTGATC 58.780 38.462 0.00 0.00 0.00 2.92
4042 4902 7.096477 CGACCTCTTTTATTGCAAAGTTTCAAG 60.096 37.037 1.71 0.75 35.56 3.02
4055 4915 7.064016 TGCAAAGTTTCAAGTGTAAATCCAAAC 59.936 33.333 0.00 0.00 0.00 2.93
4063 4923 7.304735 TCAAGTGTAAATCCAAACATGAATCG 58.695 34.615 0.00 0.00 0.00 3.34
4233 6582 3.773119 GGACCTTGTATCCCACTGACTTA 59.227 47.826 0.00 0.00 0.00 2.24
4467 6817 7.935755 ACTTCTTTCCACATATAGTCATCATGG 59.064 37.037 0.00 0.00 0.00 3.66
4544 6894 2.290705 ACCAATGTACCCTTAGTGCCAC 60.291 50.000 0.00 0.00 0.00 5.01
4567 6917 4.865925 CCAATAGTTTGTCATTGTGCATGG 59.134 41.667 0.00 0.00 33.07 3.66
4580 6930 1.097232 TGCATGGCAATGTAGCTGTC 58.903 50.000 2.31 0.00 34.76 3.51
4710 7060 3.862845 TCATACCAATGTCGAACATGACG 59.137 43.478 0.00 5.16 37.97 4.35
4776 7126 2.017049 GCAATGTCGTGGAAGCCTAAT 58.983 47.619 0.00 0.00 0.00 1.73
4807 7160 0.462047 CTTCGACCAGCCATGTACCC 60.462 60.000 0.00 0.00 0.00 3.69
4810 7163 1.830145 GACCAGCCATGTACCCGAT 59.170 57.895 0.00 0.00 0.00 4.18
4815 7168 0.895530 AGCCATGTACCCGATATCCG 59.104 55.000 0.00 0.00 38.18 4.18
4827 7180 1.335182 CGATATCCGAGACTGCACACT 59.665 52.381 0.00 0.00 41.76 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 9.460019 TGGATATTGAAATGTTCACATCTAACA 57.540 29.630 0.00 0.00 39.87 2.41
21 22 9.850198 TCATGGATATTGAAATGTTCACATCTA 57.150 29.630 0.00 6.22 39.87 1.98
22 23 8.756486 TCATGGATATTGAAATGTTCACATCT 57.244 30.769 0.00 0.00 39.87 2.90
23 24 9.976511 ATTCATGGATATTGAAATGTTCACATC 57.023 29.630 0.00 0.00 39.87 3.06
24 25 9.758651 CATTCATGGATATTGAAATGTTCACAT 57.241 29.630 0.00 0.00 39.87 3.21
25 26 7.707464 GCATTCATGGATATTGAAATGTTCACA 59.293 33.333 0.00 0.00 39.87 3.58
26 27 7.707464 TGCATTCATGGATATTGAAATGTTCAC 59.293 33.333 0.00 0.00 39.87 3.18
27 28 7.783042 TGCATTCATGGATATTGAAATGTTCA 58.217 30.769 0.00 0.00 36.72 3.18
28 29 8.827177 ATGCATTCATGGATATTGAAATGTTC 57.173 30.769 0.00 0.00 37.06 3.18
82 83 8.876275 ATTAATCTCGTAATTGCATTGCATTT 57.124 26.923 19.28 19.28 38.76 2.32
145 146 6.093082 CAGCAATTGATCAGAGATAACACACA 59.907 38.462 10.34 0.00 0.00 3.72
155 156 5.585047 TCACATTCTCAGCAATTGATCAGAG 59.415 40.000 10.34 7.17 34.68 3.35
157 158 5.813080 TCACATTCTCAGCAATTGATCAG 57.187 39.130 10.34 0.00 34.68 2.90
161 162 4.218852 TGCAATCACATTCTCAGCAATTGA 59.781 37.500 10.34 0.00 0.00 2.57
164 165 4.381612 CCTTGCAATCACATTCTCAGCAAT 60.382 41.667 0.00 0.00 39.42 3.56
174 175 1.816835 CAGACAGCCTTGCAATCACAT 59.183 47.619 0.00 0.00 0.00 3.21
176 177 1.198637 GACAGACAGCCTTGCAATCAC 59.801 52.381 0.00 0.00 0.00 3.06
180 181 1.159713 CGTGACAGACAGCCTTGCAA 61.160 55.000 0.00 0.00 0.00 4.08
214 215 7.093322 AGCAATTGGTCAATTCTTACATCTC 57.907 36.000 3.82 0.00 38.84 2.75
219 220 8.902040 CTAAGAAGCAATTGGTCAATTCTTAC 57.098 34.615 18.72 7.43 38.84 2.34
248 249 4.217118 AGTGCATAAGTGAAAAAGCAGAGG 59.783 41.667 0.00 0.00 32.03 3.69
252 253 5.163571 TGTTGAGTGCATAAGTGAAAAAGCA 60.164 36.000 0.00 0.00 0.00 3.91
253 254 5.280945 TGTTGAGTGCATAAGTGAAAAAGC 58.719 37.500 0.00 0.00 0.00 3.51
258 461 5.997129 TCTGATTGTTGAGTGCATAAGTGAA 59.003 36.000 0.00 0.00 0.00 3.18
290 504 8.002459 TCTTTGACCTTTTCCAATAACCTAACT 58.998 33.333 0.00 0.00 0.00 2.24
295 509 6.399639 TGTCTTTGACCTTTTCCAATAACC 57.600 37.500 0.00 0.00 0.00 2.85
308 522 6.111768 CAGTATGTATTGCTGTCTTTGACC 57.888 41.667 0.00 0.00 0.00 4.02
326 540 9.998106 CTAATGGTTGCCTAAAGTATACAGTAT 57.002 33.333 5.50 0.00 0.00 2.12
364 578 7.479352 TTTGGAATCTTTAATTGATGCCTCA 57.521 32.000 13.87 0.00 39.75 3.86
365 579 8.253113 TCTTTTGGAATCTTTAATTGATGCCTC 58.747 33.333 13.87 0.00 39.75 4.70
395 616 0.981183 TCCCAACTATTGCACCGACT 59.019 50.000 0.00 0.00 0.00 4.18
398 619 2.159382 ACTTTCCCAACTATTGCACCG 58.841 47.619 0.00 0.00 0.00 4.94
399 620 2.492088 GGACTTTCCCAACTATTGCACC 59.508 50.000 0.00 0.00 0.00 5.01
401 622 3.330701 AGAGGACTTTCCCAACTATTGCA 59.669 43.478 0.00 0.00 37.19 4.08
402 623 3.956744 AGAGGACTTTCCCAACTATTGC 58.043 45.455 0.00 0.00 37.19 3.56
403 624 6.490040 TGAAAAGAGGACTTTCCCAACTATTG 59.510 38.462 0.00 0.00 44.32 1.90
407 628 4.079730 AGTGAAAAGAGGACTTTCCCAACT 60.080 41.667 0.00 0.00 44.32 3.16
408 629 4.036852 CAGTGAAAAGAGGACTTTCCCAAC 59.963 45.833 0.00 0.00 44.32 3.77
409 630 4.080015 TCAGTGAAAAGAGGACTTTCCCAA 60.080 41.667 0.00 0.00 44.32 4.12
411 632 4.068599 CTCAGTGAAAAGAGGACTTTCCC 58.931 47.826 0.00 0.00 44.32 3.97
412 633 3.500299 GCTCAGTGAAAAGAGGACTTTCC 59.500 47.826 0.00 0.00 44.32 3.13
413 634 4.130118 TGCTCAGTGAAAAGAGGACTTTC 58.870 43.478 0.00 0.00 44.32 2.62
414 635 4.133078 CTGCTCAGTGAAAAGAGGACTTT 58.867 43.478 0.00 0.00 46.64 2.66
415 636 3.389329 TCTGCTCAGTGAAAAGAGGACTT 59.611 43.478 0.00 0.00 38.05 3.01
416 637 2.968574 TCTGCTCAGTGAAAAGAGGACT 59.031 45.455 0.00 0.00 32.54 3.85
417 638 3.393089 TCTGCTCAGTGAAAAGAGGAC 57.607 47.619 0.00 0.00 32.54 3.85
418 639 3.495100 GGTTCTGCTCAGTGAAAAGAGGA 60.495 47.826 0.00 0.00 32.54 3.71
419 640 2.810852 GGTTCTGCTCAGTGAAAAGAGG 59.189 50.000 0.00 0.00 32.54 3.69
420 641 3.470709 TGGTTCTGCTCAGTGAAAAGAG 58.529 45.455 0.00 0.00 35.01 2.85
421 642 3.558931 TGGTTCTGCTCAGTGAAAAGA 57.441 42.857 0.00 0.00 0.00 2.52
422 643 3.629398 ACTTGGTTCTGCTCAGTGAAAAG 59.371 43.478 0.00 0.00 0.00 2.27
502 723 6.074642 CGTCACGTCATTTATTTTACAAGCA 58.925 36.000 0.00 0.00 0.00 3.91
504 725 5.506832 GCCGTCACGTCATTTATTTTACAAG 59.493 40.000 0.00 0.00 0.00 3.16
507 730 4.093850 AGGCCGTCACGTCATTTATTTTAC 59.906 41.667 0.00 0.00 0.00 2.01
512 735 2.429610 ACTAGGCCGTCACGTCATTTAT 59.570 45.455 0.00 0.00 0.00 1.40
534 760 1.150827 CAGCACATCAGCTTTGACGA 58.849 50.000 0.00 0.00 43.70 4.20
535 761 1.150827 TCAGCACATCAGCTTTGACG 58.849 50.000 0.48 0.00 43.70 4.35
536 762 2.159421 CCATCAGCACATCAGCTTTGAC 60.159 50.000 0.48 0.00 43.70 3.18
537 763 2.089201 CCATCAGCACATCAGCTTTGA 58.911 47.619 0.48 0.00 43.70 2.69
538 764 1.469251 GCCATCAGCACATCAGCTTTG 60.469 52.381 0.00 0.00 43.70 2.77
560 786 4.712829 TGTACTGGGTAGTTTGCTATAGCA 59.287 41.667 23.52 23.52 42.91 3.49
564 790 5.950544 TCATGTACTGGGTAGTTTGCTAT 57.049 39.130 0.00 0.00 38.36 2.97
566 792 4.019321 ACATCATGTACTGGGTAGTTTGCT 60.019 41.667 0.00 0.00 38.36 3.91
577 803 1.210234 TCCCCAGCACATCATGTACTG 59.790 52.381 10.74 10.74 40.54 2.74
581 807 2.537633 AAATCCCCAGCACATCATGT 57.462 45.000 0.00 0.00 0.00 3.21
582 808 6.845758 ATATAAAATCCCCAGCACATCATG 57.154 37.500 0.00 0.00 0.00 3.07
583 809 7.702785 ACTATATAAAATCCCCAGCACATCAT 58.297 34.615 0.00 0.00 0.00 2.45
584 810 7.090319 ACTATATAAAATCCCCAGCACATCA 57.910 36.000 0.00 0.00 0.00 3.07
612 838 9.084164 GCACTCTAAAAACGTCTAAATAGATGA 57.916 33.333 14.91 0.00 40.88 2.92
613 839 8.869897 TGCACTCTAAAAACGTCTAAATAGATG 58.130 33.333 7.89 7.89 43.34 2.90
615 841 8.821147 TTGCACTCTAAAAACGTCTAAATAGA 57.179 30.769 0.00 0.00 0.00 1.98
616 842 9.478019 CATTGCACTCTAAAAACGTCTAAATAG 57.522 33.333 0.00 0.00 0.00 1.73
617 843 8.447833 CCATTGCACTCTAAAAACGTCTAAATA 58.552 33.333 0.00 0.00 0.00 1.40
618 844 7.040686 ACCATTGCACTCTAAAAACGTCTAAAT 60.041 33.333 0.00 0.00 0.00 1.40
622 848 4.134563 ACCATTGCACTCTAAAAACGTCT 58.865 39.130 0.00 0.00 0.00 4.18
623 849 4.483476 ACCATTGCACTCTAAAAACGTC 57.517 40.909 0.00 0.00 0.00 4.34
625 851 3.980775 CCAACCATTGCACTCTAAAAACG 59.019 43.478 0.00 0.00 0.00 3.60
627 853 4.219115 TCCCAACCATTGCACTCTAAAAA 58.781 39.130 0.00 0.00 0.00 1.94
629 855 3.517296 TCCCAACCATTGCACTCTAAA 57.483 42.857 0.00 0.00 0.00 1.85
632 858 2.242043 CTTTCCCAACCATTGCACTCT 58.758 47.619 0.00 0.00 0.00 3.24
633 859 1.963515 ACTTTCCCAACCATTGCACTC 59.036 47.619 0.00 0.00 0.00 3.51
634 860 1.963515 GACTTTCCCAACCATTGCACT 59.036 47.619 0.00 0.00 0.00 4.40
635 861 1.000843 GGACTTTCCCAACCATTGCAC 59.999 52.381 0.00 0.00 0.00 4.57
636 862 1.337118 GGACTTTCCCAACCATTGCA 58.663 50.000 0.00 0.00 0.00 4.08
637 863 1.000843 GTGGACTTTCCCAACCATTGC 59.999 52.381 0.00 0.00 38.06 3.56
638 864 1.618343 GGTGGACTTTCCCAACCATTG 59.382 52.381 0.00 0.00 37.96 2.82
639 865 1.219213 TGGTGGACTTTCCCAACCATT 59.781 47.619 1.18 0.00 43.23 3.16
641 867 0.631753 TTGGTGGACTTTCCCAACCA 59.368 50.000 1.18 1.18 43.23 3.67
642 868 2.009681 ATTGGTGGACTTTCCCAACC 57.990 50.000 0.00 0.00 43.23 3.77
643 869 3.244078 GGAAATTGGTGGACTTTCCCAAC 60.244 47.826 2.55 0.00 44.13 3.77
644 870 2.969262 GGAAATTGGTGGACTTTCCCAA 59.031 45.455 2.55 0.00 41.26 4.12
646 872 2.826128 GAGGAAATTGGTGGACTTTCCC 59.174 50.000 9.13 0.00 45.92 3.97
647 873 3.767711 AGAGGAAATTGGTGGACTTTCC 58.232 45.455 5.37 5.37 45.38 3.13
648 874 5.791336 AAAGAGGAAATTGGTGGACTTTC 57.209 39.130 0.00 0.00 0.00 2.62
649 875 5.660864 TGAAAAGAGGAAATTGGTGGACTTT 59.339 36.000 0.00 0.00 0.00 2.66
652 878 4.584743 AGTGAAAAGAGGAAATTGGTGGAC 59.415 41.667 0.00 0.00 0.00 4.02
653 879 4.584325 CAGTGAAAAGAGGAAATTGGTGGA 59.416 41.667 0.00 0.00 0.00 4.02
654 880 4.584325 TCAGTGAAAAGAGGAAATTGGTGG 59.416 41.667 0.00 0.00 0.00 4.61
655 881 5.766222 CTCAGTGAAAAGAGGAAATTGGTG 58.234 41.667 0.00 0.00 0.00 4.17
656 882 4.279420 GCTCAGTGAAAAGAGGAAATTGGT 59.721 41.667 0.00 0.00 32.54 3.67
657 883 4.279169 TGCTCAGTGAAAAGAGGAAATTGG 59.721 41.667 0.00 0.00 32.54 3.16
659 885 6.469782 TTTGCTCAGTGAAAAGAGGAAATT 57.530 33.333 5.24 0.00 43.93 1.82
661 887 4.097892 GGTTTGCTCAGTGAAAAGAGGAAA 59.902 41.667 5.24 5.24 45.69 3.13
663 889 3.214328 GGTTTGCTCAGTGAAAAGAGGA 58.786 45.455 0.00 0.00 32.54 3.71
665 891 4.604976 CTTGGTTTGCTCAGTGAAAAGAG 58.395 43.478 0.00 0.00 35.01 2.85
668 894 2.495270 TGCTTGGTTTGCTCAGTGAAAA 59.505 40.909 0.00 0.00 0.00 2.29
670 896 1.761449 TGCTTGGTTTGCTCAGTGAA 58.239 45.000 0.00 0.00 0.00 3.18
671 897 1.761449 TTGCTTGGTTTGCTCAGTGA 58.239 45.000 0.00 0.00 0.00 3.41
672 898 2.195922 GTTTGCTTGGTTTGCTCAGTG 58.804 47.619 0.00 0.00 0.00 3.66
673 899 1.824230 TGTTTGCTTGGTTTGCTCAGT 59.176 42.857 0.00 0.00 0.00 3.41
674 900 2.099592 TCTGTTTGCTTGGTTTGCTCAG 59.900 45.455 0.00 0.00 0.00 3.35
675 901 2.098614 TCTGTTTGCTTGGTTTGCTCA 58.901 42.857 0.00 0.00 0.00 4.26
677 903 2.224113 CCATCTGTTTGCTTGGTTTGCT 60.224 45.455 0.00 0.00 0.00 3.91
678 904 2.137523 CCATCTGTTTGCTTGGTTTGC 58.862 47.619 0.00 0.00 0.00 3.68
679 905 3.731652 TCCATCTGTTTGCTTGGTTTG 57.268 42.857 0.00 0.00 0.00 2.93
681 907 4.961438 AATTCCATCTGTTTGCTTGGTT 57.039 36.364 0.00 0.00 0.00 3.67
682 908 5.539955 AGTTAATTCCATCTGTTTGCTTGGT 59.460 36.000 0.00 0.00 0.00 3.67
710 936 9.819267 GAGCAGTACTAATTACTTTAGTCCATT 57.181 33.333 0.00 0.00 46.04 3.16
711 937 8.978472 TGAGCAGTACTAATTACTTTAGTCCAT 58.022 33.333 0.00 0.00 46.04 3.41
712 938 8.357290 TGAGCAGTACTAATTACTTTAGTCCA 57.643 34.615 0.00 0.00 46.04 4.02
713 939 8.859517 CTGAGCAGTACTAATTACTTTAGTCC 57.140 38.462 0.00 0.00 46.04 3.85
718 944 9.601217 CCAATACTGAGCAGTACTAATTACTTT 57.399 33.333 12.16 0.00 45.61 2.66
719 945 7.711339 GCCAATACTGAGCAGTACTAATTACTT 59.289 37.037 12.16 0.00 45.61 2.24
720 946 7.210873 GCCAATACTGAGCAGTACTAATTACT 58.789 38.462 12.16 0.00 45.61 2.24
721 947 6.144080 CGCCAATACTGAGCAGTACTAATTAC 59.856 42.308 12.16 0.98 45.61 1.89
722 948 6.213677 CGCCAATACTGAGCAGTACTAATTA 58.786 40.000 12.16 0.00 45.61 1.40
723 949 5.050490 CGCCAATACTGAGCAGTACTAATT 58.950 41.667 12.16 2.08 45.61 1.40
724 950 4.501571 CCGCCAATACTGAGCAGTACTAAT 60.502 45.833 12.16 0.00 45.61 1.73
725 951 3.181479 CCGCCAATACTGAGCAGTACTAA 60.181 47.826 12.16 0.00 45.61 2.24
726 952 2.361119 CCGCCAATACTGAGCAGTACTA 59.639 50.000 12.16 0.00 45.61 1.82
727 953 1.137086 CCGCCAATACTGAGCAGTACT 59.863 52.381 12.16 0.00 45.61 2.73
728 954 1.571919 CCGCCAATACTGAGCAGTAC 58.428 55.000 12.16 0.12 45.61 2.73
729 955 0.179084 GCCGCCAATACTGAGCAGTA 60.179 55.000 12.28 12.28 46.68 2.74
730 956 1.450312 GCCGCCAATACTGAGCAGT 60.450 57.895 8.35 8.35 45.02 4.40
731 957 1.434622 CTGCCGCCAATACTGAGCAG 61.435 60.000 0.00 0.00 41.43 4.24
732 958 1.450134 CTGCCGCCAATACTGAGCA 60.450 57.895 0.00 0.00 0.00 4.26
733 959 1.026718 AACTGCCGCCAATACTGAGC 61.027 55.000 0.00 0.00 0.00 4.26
734 960 1.453155 AAACTGCCGCCAATACTGAG 58.547 50.000 0.00 0.00 0.00 3.35
735 961 1.539388 CAAAACTGCCGCCAATACTGA 59.461 47.619 0.00 0.00 0.00 3.41
736 962 1.269448 ACAAAACTGCCGCCAATACTG 59.731 47.619 0.00 0.00 0.00 2.74
737 963 1.616159 ACAAAACTGCCGCCAATACT 58.384 45.000 0.00 0.00 0.00 2.12
738 964 3.562567 TTACAAAACTGCCGCCAATAC 57.437 42.857 0.00 0.00 0.00 1.89
739 965 3.570550 AGTTTACAAAACTGCCGCCAATA 59.429 39.130 4.32 0.00 0.00 1.90
740 966 2.364002 AGTTTACAAAACTGCCGCCAAT 59.636 40.909 4.32 0.00 0.00 3.16
741 967 1.751924 AGTTTACAAAACTGCCGCCAA 59.248 42.857 4.32 0.00 0.00 4.52
742 968 1.394618 AGTTTACAAAACTGCCGCCA 58.605 45.000 4.32 0.00 0.00 5.69
743 969 3.629438 TTAGTTTACAAAACTGCCGCC 57.371 42.857 13.84 0.00 0.00 6.13
744 970 5.116528 GTCATTTAGTTTACAAAACTGCCGC 59.883 40.000 13.84 0.00 0.00 6.53
745 971 5.338559 CGTCATTTAGTTTACAAAACTGCCG 59.661 40.000 13.84 0.00 0.00 5.69
746 972 6.203647 ACGTCATTTAGTTTACAAAACTGCC 58.796 36.000 13.84 0.00 0.00 4.85
747 973 8.675888 GTTACGTCATTTAGTTTACAAAACTGC 58.324 33.333 13.84 0.00 0.00 4.40
748 974 8.875444 CGTTACGTCATTTAGTTTACAAAACTG 58.125 33.333 13.84 0.47 0.00 3.16
749 975 8.063630 CCGTTACGTCATTTAGTTTACAAAACT 58.936 33.333 3.52 9.74 0.00 2.66
750 976 7.149303 GCCGTTACGTCATTTAGTTTACAAAAC 60.149 37.037 3.52 0.00 0.00 2.43
751 977 6.850317 GCCGTTACGTCATTTAGTTTACAAAA 59.150 34.615 3.52 0.00 0.00 2.44
752 978 6.361899 GCCGTTACGTCATTTAGTTTACAAA 58.638 36.000 3.52 0.00 0.00 2.83
753 979 5.107143 GGCCGTTACGTCATTTAGTTTACAA 60.107 40.000 3.52 0.00 0.00 2.41
754 980 4.388469 GGCCGTTACGTCATTTAGTTTACA 59.612 41.667 3.52 0.00 0.00 2.41
755 981 4.388469 TGGCCGTTACGTCATTTAGTTTAC 59.612 41.667 3.52 0.00 0.00 2.01
756 982 4.564041 TGGCCGTTACGTCATTTAGTTTA 58.436 39.130 3.52 0.00 0.00 2.01
757 983 3.401182 TGGCCGTTACGTCATTTAGTTT 58.599 40.909 3.52 0.00 0.00 2.66
758 984 3.042871 TGGCCGTTACGTCATTTAGTT 57.957 42.857 3.52 0.00 0.00 2.24
759 985 2.747396 TGGCCGTTACGTCATTTAGT 57.253 45.000 3.52 0.00 0.00 2.24
760 986 2.997986 ACTTGGCCGTTACGTCATTTAG 59.002 45.455 3.52 0.00 0.00 1.85
761 987 3.042871 ACTTGGCCGTTACGTCATTTA 57.957 42.857 3.52 0.00 0.00 1.40
762 988 1.886886 ACTTGGCCGTTACGTCATTT 58.113 45.000 3.52 0.00 0.00 2.32
763 989 1.802365 GAACTTGGCCGTTACGTCATT 59.198 47.619 3.52 0.00 0.00 2.57
764 990 1.435577 GAACTTGGCCGTTACGTCAT 58.564 50.000 3.52 0.00 0.00 3.06
765 991 0.940519 CGAACTTGGCCGTTACGTCA 60.941 55.000 3.52 0.00 0.00 4.35
766 992 0.940991 ACGAACTTGGCCGTTACGTC 60.941 55.000 3.52 0.00 35.21 4.34
767 993 0.940991 GACGAACTTGGCCGTTACGT 60.941 55.000 15.31 15.31 39.30 3.57
768 994 0.940519 TGACGAACTTGGCCGTTACG 60.941 55.000 0.00 0.00 39.30 3.18
769 995 1.219646 TTGACGAACTTGGCCGTTAC 58.780 50.000 0.00 0.00 39.30 2.50
770 996 1.801771 CATTGACGAACTTGGCCGTTA 59.198 47.619 0.00 0.00 39.30 3.18
771 997 0.591170 CATTGACGAACTTGGCCGTT 59.409 50.000 0.00 0.00 39.30 4.44
772 998 1.852067 GCATTGACGAACTTGGCCGT 61.852 55.000 0.00 0.00 42.17 5.68
773 999 1.154225 GCATTGACGAACTTGGCCG 60.154 57.895 0.00 0.00 0.00 6.13
774 1000 1.448985 TAGCATTGACGAACTTGGCC 58.551 50.000 0.00 0.00 0.00 5.36
775 1001 3.764885 ATTAGCATTGACGAACTTGGC 57.235 42.857 0.00 0.00 0.00 4.52
776 1002 4.324402 GCAAATTAGCATTGACGAACTTGG 59.676 41.667 0.00 0.00 0.00 3.61
777 1003 5.060077 CAGCAAATTAGCATTGACGAACTTG 59.940 40.000 0.00 0.00 36.85 3.16
778 1004 5.048782 TCAGCAAATTAGCATTGACGAACTT 60.049 36.000 0.00 0.00 36.85 2.66
779 1005 4.455533 TCAGCAAATTAGCATTGACGAACT 59.544 37.500 0.00 0.00 36.85 3.01
780 1006 4.722194 TCAGCAAATTAGCATTGACGAAC 58.278 39.130 0.00 0.00 36.85 3.95
781 1007 5.334319 CATCAGCAAATTAGCATTGACGAA 58.666 37.500 0.00 0.00 36.85 3.85
782 1008 4.201940 CCATCAGCAAATTAGCATTGACGA 60.202 41.667 0.00 0.00 36.85 4.20
783 1009 4.039703 CCATCAGCAAATTAGCATTGACG 58.960 43.478 0.00 0.00 36.85 4.35
784 1010 5.163581 ACTCCATCAGCAAATTAGCATTGAC 60.164 40.000 0.00 0.00 36.85 3.18
785 1011 4.951715 ACTCCATCAGCAAATTAGCATTGA 59.048 37.500 0.00 0.00 36.85 2.57
786 1012 5.258456 ACTCCATCAGCAAATTAGCATTG 57.742 39.130 0.00 0.00 36.85 2.82
787 1013 6.125029 ACTACTCCATCAGCAAATTAGCATT 58.875 36.000 0.00 0.00 36.85 3.56
788 1014 5.688807 ACTACTCCATCAGCAAATTAGCAT 58.311 37.500 0.00 0.00 36.85 3.79
789 1015 5.102953 ACTACTCCATCAGCAAATTAGCA 57.897 39.130 0.00 0.00 36.85 3.49
790 1016 6.284459 AGTACTACTCCATCAGCAAATTAGC 58.716 40.000 0.00 0.00 0.00 3.09
791 1017 9.469807 CTTAGTACTACTCCATCAGCAAATTAG 57.530 37.037 0.91 0.00 0.00 1.73
792 1018 8.421784 CCTTAGTACTACTCCATCAGCAAATTA 58.578 37.037 0.91 0.00 0.00 1.40
793 1019 7.092846 ACCTTAGTACTACTCCATCAGCAAATT 60.093 37.037 0.91 0.00 0.00 1.82
794 1020 6.384305 ACCTTAGTACTACTCCATCAGCAAAT 59.616 38.462 0.91 0.00 0.00 2.32
795 1021 5.720041 ACCTTAGTACTACTCCATCAGCAAA 59.280 40.000 0.91 0.00 0.00 3.68
796 1022 5.269991 ACCTTAGTACTACTCCATCAGCAA 58.730 41.667 0.91 0.00 0.00 3.91
797 1023 4.868268 ACCTTAGTACTACTCCATCAGCA 58.132 43.478 0.91 0.00 0.00 4.41
798 1024 5.855740 AACCTTAGTACTACTCCATCAGC 57.144 43.478 0.91 0.00 0.00 4.26
799 1025 6.154706 ACCAAACCTTAGTACTACTCCATCAG 59.845 42.308 0.91 0.00 0.00 2.90
800 1026 6.021030 ACCAAACCTTAGTACTACTCCATCA 58.979 40.000 0.91 0.00 0.00 3.07
801 1027 6.154021 TGACCAAACCTTAGTACTACTCCATC 59.846 42.308 0.91 0.00 0.00 3.51
802 1028 6.021030 TGACCAAACCTTAGTACTACTCCAT 58.979 40.000 0.91 0.00 0.00 3.41
803 1029 5.396485 TGACCAAACCTTAGTACTACTCCA 58.604 41.667 0.91 0.00 0.00 3.86
804 1030 5.990120 TGACCAAACCTTAGTACTACTCC 57.010 43.478 0.91 0.00 0.00 3.85
805 1031 6.817140 CCAATGACCAAACCTTAGTACTACTC 59.183 42.308 0.91 0.00 0.00 2.59
806 1032 6.499350 TCCAATGACCAAACCTTAGTACTACT 59.501 38.462 0.91 0.00 0.00 2.57
807 1033 6.704310 TCCAATGACCAAACCTTAGTACTAC 58.296 40.000 0.91 0.00 0.00 2.73
808 1034 6.938698 TCCAATGACCAAACCTTAGTACTA 57.061 37.500 0.00 0.00 0.00 1.82
809 1035 5.836024 TCCAATGACCAAACCTTAGTACT 57.164 39.130 0.00 0.00 0.00 2.73
810 1036 7.462571 AATTCCAATGACCAAACCTTAGTAC 57.537 36.000 0.00 0.00 0.00 2.73
811 1037 9.762381 ATAAATTCCAATGACCAAACCTTAGTA 57.238 29.630 0.00 0.00 0.00 1.82
812 1038 6.994421 AAATTCCAATGACCAAACCTTAGT 57.006 33.333 0.00 0.00 0.00 2.24
876 1105 4.454161 TGACAACGATGGATACTTTTGTGG 59.546 41.667 0.00 0.00 37.61 4.17
877 1106 5.605564 TGACAACGATGGATACTTTTGTG 57.394 39.130 0.00 0.00 37.61 3.33
880 1109 7.822334 TCATAGTTGACAACGATGGATACTTTT 59.178 33.333 29.53 7.18 42.50 2.27
881 1110 7.327975 TCATAGTTGACAACGATGGATACTTT 58.672 34.615 29.53 7.35 42.50 2.66
884 1479 6.923508 TGATCATAGTTGACAACGATGGATAC 59.076 38.462 29.53 20.96 42.50 2.24
893 1488 9.469807 CTATCCTTACTGATCATAGTTGACAAC 57.530 37.037 10.47 10.47 33.85 3.32
904 1499 5.893824 TGTTCAGAGCTATCCTTACTGATCA 59.106 40.000 0.00 0.00 37.43 2.92
905 1500 6.040391 AGTGTTCAGAGCTATCCTTACTGATC 59.960 42.308 0.00 0.00 37.43 2.92
908 1503 5.590530 AGTGTTCAGAGCTATCCTTACTG 57.409 43.478 0.00 0.00 0.00 2.74
942 1551 4.318332 TGAAAGAAGCAACTCGATCACAT 58.682 39.130 0.00 0.00 0.00 3.21
945 1554 3.935203 GGATGAAAGAAGCAACTCGATCA 59.065 43.478 0.00 0.00 0.00 2.92
953 1562 3.507162 TGGTGAGGATGAAAGAAGCAA 57.493 42.857 0.00 0.00 0.00 3.91
954 1563 3.349927 CATGGTGAGGATGAAAGAAGCA 58.650 45.455 0.00 0.00 0.00 3.91
966 1575 2.086869 AGTTCGAATTGCATGGTGAGG 58.913 47.619 0.00 0.00 0.00 3.86
969 1578 3.426159 GGTGTAGTTCGAATTGCATGGTG 60.426 47.826 14.02 0.00 0.00 4.17
970 1579 2.747446 GGTGTAGTTCGAATTGCATGGT 59.253 45.455 14.02 0.00 0.00 3.55
972 1581 2.097466 GGGGTGTAGTTCGAATTGCATG 59.903 50.000 14.02 0.00 0.00 4.06
973 1582 2.290641 TGGGGTGTAGTTCGAATTGCAT 60.291 45.455 14.02 0.00 0.00 3.96
974 1583 1.072489 TGGGGTGTAGTTCGAATTGCA 59.928 47.619 7.34 7.34 0.00 4.08
975 1584 1.816074 TGGGGTGTAGTTCGAATTGC 58.184 50.000 0.00 0.55 0.00 3.56
981 1590 1.600023 TTGCTTTGGGGTGTAGTTCG 58.400 50.000 0.00 0.00 0.00 3.95
987 1596 1.269012 CATCCATTGCTTTGGGGTGT 58.731 50.000 5.78 0.00 37.37 4.16
1005 1614 0.752743 GCACATAGGGATGGCTTGCA 60.753 55.000 0.00 0.00 37.39 4.08
1053 1668 2.375174 TGAAAGGGTGAAGTATGCCAGT 59.625 45.455 0.00 0.00 0.00 4.00
1054 1669 3.012518 CTGAAAGGGTGAAGTATGCCAG 58.987 50.000 0.00 0.00 0.00 4.85
1059 1674 2.678190 GCGAGCTGAAAGGGTGAAGTAT 60.678 50.000 0.00 0.00 0.00 2.12
1152 1767 2.124109 TGGTGCGGAAGTTTGCCA 60.124 55.556 0.00 0.00 0.00 4.92
1174 1789 1.236616 CGCTGGGCAAGATCACACAA 61.237 55.000 0.00 0.00 0.00 3.33
1177 1792 2.747460 GCGCTGGGCAAGATCACA 60.747 61.111 12.19 0.00 42.87 3.58
1236 1851 4.760047 GCCGACGATGCCACCACT 62.760 66.667 0.00 0.00 0.00 4.00
1273 1888 1.443702 CGATGTCGTGCGTCCTCAA 60.444 57.895 0.00 0.00 34.11 3.02
1299 1914 3.129502 CTGCTGATGGGGCGTGTG 61.130 66.667 0.00 0.00 0.00 3.82
1320 1935 5.009310 GCCATCAACAATGATCAGCTTCATA 59.991 40.000 0.09 0.00 44.53 2.15
1333 1948 0.107017 CCCTCCGAGCCATCAACAAT 60.107 55.000 0.00 0.00 0.00 2.71
1479 2094 4.451150 GTCGATGCCACGGCCTGA 62.451 66.667 5.42 0.00 41.09 3.86
1505 2120 2.280524 CGAGGTTCACGGCCAACA 60.281 61.111 2.24 0.00 0.00 3.33
1506 2121 3.047877 CCGAGGTTCACGGCCAAC 61.048 66.667 2.24 0.00 43.74 3.77
1560 2181 1.202417 CGACTTCCTATCATGGCACGT 60.202 52.381 0.00 0.00 0.00 4.49
1563 2184 1.496060 ACCGACTTCCTATCATGGCA 58.504 50.000 0.00 0.00 0.00 4.92
1569 2190 3.430513 GGTCCTTGAACCGACTTCCTATC 60.431 52.174 0.00 0.00 0.00 2.08
1725 2346 1.758280 TCCATGAAAGCCATCATTGCC 59.242 47.619 0.00 0.00 37.96 4.52
1812 2436 3.988976 TGGTTCTGGATTCTCAAGAGG 57.011 47.619 0.00 0.00 0.00 3.69
1852 2476 1.230635 ATGTTGTCTGTGGTGAGCGC 61.231 55.000 0.00 0.00 0.00 5.92
1878 2502 1.820519 TCGTAACTTACCGCCATCACT 59.179 47.619 0.00 0.00 0.00 3.41
1914 2538 6.264292 AGCTATTTAGTGTCATGACTCGAGAT 59.736 38.462 25.55 19.45 0.00 2.75
1917 2541 5.836821 AGCTATTTAGTGTCATGACTCGA 57.163 39.130 25.55 16.00 0.00 4.04
1918 2542 5.627367 GCTAGCTATTTAGTGTCATGACTCG 59.373 44.000 25.55 9.99 0.00 4.18
1935 2559 5.831525 TGCCTAACAATACTGTAGCTAGCTA 59.168 40.000 20.67 20.67 33.45 3.32
1994 2624 5.068636 CGGTTTACTAGGCTGGATACTCTA 58.931 45.833 4.33 0.00 37.61 2.43
1995 2625 3.890147 CGGTTTACTAGGCTGGATACTCT 59.110 47.826 4.33 0.00 37.61 3.24
2049 2693 2.769602 TTAGGGGATCGGCTAGAACT 57.230 50.000 0.00 0.00 0.00 3.01
2124 2773 6.157904 TGTTGAACTCATGTTTAATGCATGG 58.842 36.000 0.00 11.17 42.72 3.66
2139 2789 6.800543 TGCAGAGACTATCTATGTTGAACTC 58.199 40.000 0.00 0.00 37.96 3.01
2217 2893 6.399669 CGACCGAATTTGAGTGTAGTTTAGTG 60.400 42.308 0.00 0.00 0.00 2.74
2222 2898 4.247267 TCGACCGAATTTGAGTGTAGTT 57.753 40.909 0.00 0.00 0.00 2.24
2223 2899 3.928727 TCGACCGAATTTGAGTGTAGT 57.071 42.857 0.00 0.00 0.00 2.73
2224 2900 4.090066 CAGTTCGACCGAATTTGAGTGTAG 59.910 45.833 8.14 0.00 36.45 2.74
2225 2901 3.985279 CAGTTCGACCGAATTTGAGTGTA 59.015 43.478 8.14 0.00 36.45 2.90
2304 3033 4.754667 GTGTCTTCCCCGGCGACC 62.755 72.222 9.30 0.00 0.00 4.79
2320 3055 1.972223 CGTCGAGGAGTGGTGGAGT 60.972 63.158 0.00 0.00 0.00 3.85
2383 3160 3.139584 TCATATCTAACGTGGAGGAGGGA 59.860 47.826 0.00 0.00 0.00 4.20
2392 3169 6.560433 GCGAAGTCATTGTCATATCTAACGTG 60.560 42.308 0.00 0.00 0.00 4.49
2393 3170 5.459107 GCGAAGTCATTGTCATATCTAACGT 59.541 40.000 0.00 0.00 0.00 3.99
2397 3174 4.984785 GCAGCGAAGTCATTGTCATATCTA 59.015 41.667 0.00 0.00 0.00 1.98
2407 3184 1.470098 GTCAATGGCAGCGAAGTCATT 59.530 47.619 2.07 2.07 0.00 2.57
2447 3224 1.834263 GCACCTAGAGATTGTGGAGGT 59.166 52.381 0.00 0.00 41.28 3.85
2457 3234 2.407428 CGTCGGCAGCACCTAGAGA 61.407 63.158 0.00 0.00 35.61 3.10
2473 3250 1.139058 GCCTACATGAATGACCTCCGT 59.861 52.381 0.00 0.00 0.00 4.69
2598 3409 1.519455 CCGACGCCCATCTGAACTC 60.519 63.158 0.00 0.00 0.00 3.01
2663 3474 1.722011 GGTCATTTGACACGACCGAT 58.278 50.000 12.43 0.00 46.47 4.18
2675 3486 1.451387 GCGGTGGATCGGGTCATTT 60.451 57.895 0.00 0.00 0.00 2.32
2783 3594 3.780173 AGAGCTCCTTCCGCTGCC 61.780 66.667 10.93 0.00 37.96 4.85
2852 3690 4.082523 CGGGTCATGTCCGCCACT 62.083 66.667 14.90 0.00 41.07 4.00
2863 3701 0.179121 GACATCACGTATGCGGGTCA 60.179 55.000 5.08 0.00 43.08 4.02
2864 3702 0.179121 TGACATCACGTATGCGGGTC 60.179 55.000 5.08 8.69 43.08 4.46
2866 3704 0.875908 CCTGACATCACGTATGCGGG 60.876 60.000 8.39 2.85 44.11 6.13
2869 3707 2.408050 GATCCCTGACATCACGTATGC 58.592 52.381 0.00 0.00 39.39 3.14
2870 3708 2.608016 CGGATCCCTGACATCACGTATG 60.608 54.545 6.06 0.00 41.74 2.39
2871 3709 1.613925 CGGATCCCTGACATCACGTAT 59.386 52.381 6.06 0.00 0.00 3.06
2872 3710 1.029681 CGGATCCCTGACATCACGTA 58.970 55.000 6.06 0.00 0.00 3.57
2873 3711 0.683179 TCGGATCCCTGACATCACGT 60.683 55.000 6.06 0.00 0.00 4.49
2874 3712 0.031314 CTCGGATCCCTGACATCACG 59.969 60.000 6.06 0.00 0.00 4.35
2875 3713 0.249657 GCTCGGATCCCTGACATCAC 60.250 60.000 6.06 0.00 0.00 3.06
2877 3715 0.033228 CAGCTCGGATCCCTGACATC 59.967 60.000 6.06 0.00 0.00 3.06
2878 3716 2.037620 GCAGCTCGGATCCCTGACAT 62.038 60.000 17.79 0.00 0.00 3.06
2879 3717 2.725312 GCAGCTCGGATCCCTGACA 61.725 63.158 17.79 0.00 0.00 3.58
2880 3718 2.107953 GCAGCTCGGATCCCTGAC 59.892 66.667 17.79 7.59 0.00 3.51
2881 3719 3.157252 GGCAGCTCGGATCCCTGA 61.157 66.667 17.79 5.09 0.00 3.86
2882 3720 4.598894 CGGCAGCTCGGATCCCTG 62.599 72.222 6.06 9.12 0.00 4.45
2892 3732 4.379243 CTCCAACGACCGGCAGCT 62.379 66.667 0.00 0.00 0.00 4.24
2898 3738 2.432628 GGTGCTCTCCAACGACCG 60.433 66.667 0.00 0.00 0.00 4.79
2912 3752 3.792053 GACATAGCGGGCGGAGGTG 62.792 68.421 0.00 0.00 0.00 4.00
2920 3760 3.476031 AATGGCCGGACATAGCGGG 62.476 63.158 26.67 0.00 0.00 6.13
2923 3763 1.898574 CCCAATGGCCGGACATAGC 60.899 63.158 26.67 0.00 0.00 2.97
2925 3765 1.705002 CCTCCCAATGGCCGGACATA 61.705 60.000 26.67 6.79 0.00 2.29
2927 3767 3.727258 CCTCCCAATGGCCGGACA 61.727 66.667 15.46 15.46 0.00 4.02
2974 3827 1.001631 TCCTCTTCTCCCCATCGCA 59.998 57.895 0.00 0.00 0.00 5.10
2999 3852 5.724370 TCTCTCTCTTTCTCTCTACCTCTCA 59.276 44.000 0.00 0.00 0.00 3.27
3007 3860 9.533831 AGTAAAATTCTCTCTCTCTTTCTCTCT 57.466 33.333 0.00 0.00 0.00 3.10
3008 3861 9.788960 GAGTAAAATTCTCTCTCTCTTTCTCTC 57.211 37.037 0.00 0.00 0.00 3.20
3009 3862 8.458843 CGAGTAAAATTCTCTCTCTCTTTCTCT 58.541 37.037 0.00 0.00 0.00 3.10
3010 3863 7.700656 CCGAGTAAAATTCTCTCTCTCTTTCTC 59.299 40.741 0.00 0.00 0.00 2.87
3014 3867 5.394773 GGCCGAGTAAAATTCTCTCTCTCTT 60.395 44.000 0.00 0.00 0.00 2.85
3019 3872 2.738964 GCGGCCGAGTAAAATTCTCTCT 60.739 50.000 33.48 0.00 0.00 3.10
3104 3958 4.079970 CACCTAGCCGATCTCTTATACCA 58.920 47.826 0.00 0.00 0.00 3.25
3144 3998 5.120830 GGCCATAAGAGAGTATATTTGCGTG 59.879 44.000 0.00 0.00 0.00 5.34
3382 4238 3.188048 GTCTCTTTGATGACAAGGTGCAG 59.812 47.826 0.00 0.00 37.32 4.41
3390 4246 3.615110 GCCGAAGAGTCTCTTTGATGACA 60.615 47.826 25.75 0.00 39.68 3.58
3476 4332 3.341629 CCCCCACTGGCAGGTCAT 61.342 66.667 20.34 0.00 0.00 3.06
3546 4402 0.034670 GCATGAACTCCTCTGGCCTT 60.035 55.000 3.32 0.00 0.00 4.35
3567 4423 3.054728 TGTTGTTGACCTCAAACCTCTCA 60.055 43.478 0.00 0.00 37.63 3.27
3675 4532 0.804364 TAGCAAGCGCAAGTTCCATG 59.196 50.000 11.47 0.00 42.27 3.66
3738 4595 1.954146 CATATCAACGTCCGCCGGG 60.954 63.158 1.90 0.00 42.24 5.73
3748 4605 2.435805 TCAGGGCCTCTGTCATATCAAC 59.564 50.000 17.55 0.00 43.76 3.18
3764 4621 1.999071 CTTCGAGACGGCTCTCAGGG 61.999 65.000 17.99 0.00 43.03 4.45
3794 4651 0.108019 AACCGGGACAACCAGAAGAC 59.892 55.000 6.32 0.00 40.22 3.01
3795 4652 0.107831 CAACCGGGACAACCAGAAGA 59.892 55.000 6.32 0.00 40.22 2.87
3807 4664 0.320596 TTGGTACGCTAACAACCGGG 60.321 55.000 6.32 0.00 35.98 5.73
3817 4674 5.546621 AGTATTGGTCATATTGGTACGCT 57.453 39.130 0.00 0.00 0.00 5.07
3865 4722 3.054878 CACAAATGAGAAAGGCAACAGC 58.945 45.455 0.00 0.00 41.41 4.40
3869 4726 6.204688 CAGTAGTACACAAATGAGAAAGGCAA 59.795 38.462 2.52 0.00 0.00 4.52
3891 4748 7.882791 TGGTAGACACAAATCATGATAAACAGT 59.117 33.333 9.04 4.64 0.00 3.55
3892 4749 8.267620 TGGTAGACACAAATCATGATAAACAG 57.732 34.615 9.04 1.36 0.00 3.16
4006 4866 5.793030 ATAAAAGAGGTCGTAGGGATCAG 57.207 43.478 0.00 0.00 0.00 2.90
4011 4871 3.869065 TGCAATAAAAGAGGTCGTAGGG 58.131 45.455 0.00 0.00 0.00 3.53
4042 4902 7.305474 ACTTCGATTCATGTTTGGATTTACAC 58.695 34.615 0.00 0.00 0.00 2.90
4055 4915 6.483307 TGGCTCCTTTTATACTTCGATTCATG 59.517 38.462 0.00 0.00 0.00 3.07
4063 4923 7.689446 AAAGTCTTGGCTCCTTTTATACTTC 57.311 36.000 0.00 0.00 0.00 3.01
4142 5016 4.485163 GGTGCTCAATGGTGTGAAAATAC 58.515 43.478 0.00 0.00 0.00 1.89
4233 6582 8.960591 CAAAACTTAGATGTTGTAGATGGGATT 58.039 33.333 0.00 0.00 0.00 3.01
4467 6817 2.740447 GGTCGTCAACACCAAGAATACC 59.260 50.000 0.00 0.00 33.63 2.73
4544 6894 4.865925 CCATGCACAATGACAAACTATTGG 59.134 41.667 0.00 0.00 38.72 3.16
4567 6917 2.416547 ACATCAACGACAGCTACATTGC 59.583 45.455 0.00 0.00 0.00 3.56
4580 6930 5.061064 GGCGAATATAAGCTCTACATCAACG 59.939 44.000 0.00 0.00 0.00 4.10
4676 7026 7.598118 TCGACATTGGTATGACTAAAAACGTTA 59.402 33.333 0.00 0.00 35.65 3.18
4710 7060 3.749226 CCTAATCAGGGATTGGAAGCTC 58.251 50.000 4.17 0.00 38.41 4.09
4807 7160 1.335182 AGTGTGCAGTCTCGGATATCG 59.665 52.381 0.00 0.00 40.90 2.92
4810 7163 0.173481 GCAGTGTGCAGTCTCGGATA 59.827 55.000 0.00 0.00 44.26 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.