Multiple sequence alignment - TraesCS2B01G058900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G058900 chr2B 100.000 4086 0 0 780 4865 28619197 28623282 0.000000e+00 7546.0
1 TraesCS2B01G058900 chr2B 82.585 3095 464 55 833 3894 28449774 28452826 0.000000e+00 2660.0
2 TraesCS2B01G058900 chr2B 82.668 3058 468 37 852 3870 28654951 28657985 0.000000e+00 2654.0
3 TraesCS2B01G058900 chr2B 100.000 529 0 0 1 529 28618418 28618946 0.000000e+00 977.0
4 TraesCS2B01G058900 chr2B 83.797 395 47 10 3993 4374 28658021 28658411 4.630000e-95 359.0
5 TraesCS2B01G058900 chr2B 85.965 57 2 5 188 244 441397160 441397210 6.800000e-04 56.5
6 TraesCS2B01G058900 chrUn 89.469 3067 292 22 849 3898 266780103 266783155 0.000000e+00 3845.0
7 TraesCS2B01G058900 chrUn 83.358 2734 414 30 999 3707 24401843 24404560 0.000000e+00 2490.0
8 TraesCS2B01G058900 chrUn 80.466 1029 178 17 2870 3890 297240739 297241752 0.000000e+00 765.0
9 TraesCS2B01G058900 chrUn 83.784 185 21 5 3927 4103 266783227 266783410 3.010000e-37 167.0
10 TraesCS2B01G058900 chr2D 82.819 3015 473 31 886 3870 16332907 16335906 0.000000e+00 2656.0
11 TraesCS2B01G058900 chr2D 81.632 3076 498 41 852 3894 16355061 16358102 0.000000e+00 2488.0
12 TraesCS2B01G058900 chr2D 80.868 2974 488 44 857 3792 16349963 16352893 0.000000e+00 2265.0
13 TraesCS2B01G058900 chr2A 83.706 2817 410 28 1136 3913 18319152 18321958 0.000000e+00 2614.0
14 TraesCS2B01G058900 chr2A 81.292 3111 507 48 831 3898 18295153 18298231 0.000000e+00 2451.0
15 TraesCS2B01G058900 chr2A 83.526 2416 372 24 1343 3745 18337103 18339505 0.000000e+00 2233.0
16 TraesCS2B01G058900 chr2A 84.897 437 55 9 3927 4357 18298299 18298730 9.670000e-117 431.0
17 TraesCS2B01G058900 chr2A 78.233 317 39 16 4338 4630 18322556 18322866 5.000000e-40 176.0
18 TraesCS2B01G058900 chr6A 74.084 764 159 28 999 1738 29608056 29608804 1.330000e-70 278.0
19 TraesCS2B01G058900 chr1B 74.539 271 43 19 163 427 184737852 184737602 1.440000e-15 95.3
20 TraesCS2B01G058900 chr1B 89.394 66 2 3 363 427 261631042 261630981 1.450000e-10 78.7
21 TraesCS2B01G058900 chr1B 89.394 66 2 3 363 427 261648747 261648686 1.450000e-10 78.7
22 TraesCS2B01G058900 chr1B 89.062 64 2 3 365 427 261659354 261659295 1.880000e-09 75.0
23 TraesCS2B01G058900 chr4D 93.333 45 1 2 200 244 349084626 349084584 1.130000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G058900 chr2B 28618418 28623282 4864 False 4261.5 7546 100.0000 1 4865 2 chr2B.!!$F3 4864
1 TraesCS2B01G058900 chr2B 28449774 28452826 3052 False 2660.0 2660 82.5850 833 3894 1 chr2B.!!$F1 3061
2 TraesCS2B01G058900 chr2B 28654951 28658411 3460 False 1506.5 2654 83.2325 852 4374 2 chr2B.!!$F4 3522
3 TraesCS2B01G058900 chrUn 24401843 24404560 2717 False 2490.0 2490 83.3580 999 3707 1 chrUn.!!$F1 2708
4 TraesCS2B01G058900 chrUn 266780103 266783410 3307 False 2006.0 3845 86.6265 849 4103 2 chrUn.!!$F3 3254
5 TraesCS2B01G058900 chrUn 297240739 297241752 1013 False 765.0 765 80.4660 2870 3890 1 chrUn.!!$F2 1020
6 TraesCS2B01G058900 chr2D 16332907 16335906 2999 False 2656.0 2656 82.8190 886 3870 1 chr2D.!!$F1 2984
7 TraesCS2B01G058900 chr2D 16349963 16358102 8139 False 2376.5 2488 81.2500 852 3894 2 chr2D.!!$F2 3042
8 TraesCS2B01G058900 chr2A 18337103 18339505 2402 False 2233.0 2233 83.5260 1343 3745 1 chr2A.!!$F1 2402
9 TraesCS2B01G058900 chr2A 18295153 18298730 3577 False 1441.0 2451 83.0945 831 4357 2 chr2A.!!$F2 3526
10 TraesCS2B01G058900 chr2A 18319152 18322866 3714 False 1395.0 2614 80.9695 1136 4630 2 chr2A.!!$F3 3494
11 TraesCS2B01G058900 chr6A 29608056 29608804 748 False 278.0 278 74.0840 999 1738 1 chr6A.!!$F1 739

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
800 801 0.890542 GGGTGCACACAAGCAGATGA 60.891 55.000 20.43 0.00 46.69 2.92 F
1197 1219 1.021202 TTGACAGGAAAGGTTGCACG 58.979 50.000 0.00 0.00 0.00 5.34 F
2755 7926 1.271054 ACCTTGCTGTGTTGGAGCTAG 60.271 52.381 0.00 0.00 38.54 3.42 F
3162 8333 0.239347 GCATCCACTGTGCACAACTC 59.761 55.000 21.98 2.35 42.08 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2426 7589 0.605589 TCGAACGAGCTCTGTCAGGA 60.606 55.0 12.85 7.07 0.00 3.86 R
2904 8075 1.039068 CTCGAGGGAGATGCAGACAT 58.961 55.0 3.91 0.00 43.27 3.06 R
3834 9028 0.245539 CAGAGCTGCAACAAATGGGG 59.754 55.0 1.02 0.00 0.00 4.96 R
4822 10256 0.248458 CACGTGAACCAACAGGCAAC 60.248 55.0 10.90 0.00 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 9.389570 ACAGTCGTAAATAAAATTTACTTGTGC 57.610 29.630 16.38 6.08 33.85 4.57
94 95 9.388346 CAGTCGTAAATAAAATTTACTTGTGCA 57.612 29.630 16.38 0.00 33.85 4.57
95 96 9.389570 AGTCGTAAATAAAATTTACTTGTGCAC 57.610 29.630 10.75 10.75 33.85 4.57
96 97 9.389570 GTCGTAAATAAAATTTACTTGTGCACT 57.610 29.630 19.41 0.00 33.85 4.40
97 98 9.953697 TCGTAAATAAAATTTACTTGTGCACTT 57.046 25.926 19.41 4.90 33.85 3.16
98 99 9.987901 CGTAAATAAAATTTACTTGTGCACTTG 57.012 29.630 19.41 12.84 33.85 3.16
106 107 8.996024 AATTTACTTGTGCACTTGTTTTTAGT 57.004 26.923 19.41 10.15 0.00 2.24
109 110 9.562583 TTTACTTGTGCACTTGTTTTTAGTAAG 57.437 29.630 19.41 10.62 30.18 2.34
110 111 6.560711 ACTTGTGCACTTGTTTTTAGTAAGG 58.439 36.000 19.41 0.00 0.00 2.69
111 112 4.927422 TGTGCACTTGTTTTTAGTAAGGC 58.073 39.130 19.41 0.00 0.00 4.35
112 113 4.399618 TGTGCACTTGTTTTTAGTAAGGCA 59.600 37.500 19.41 0.00 0.00 4.75
113 114 5.068460 TGTGCACTTGTTTTTAGTAAGGCAT 59.932 36.000 19.41 0.00 33.51 4.40
114 115 5.983118 GTGCACTTGTTTTTAGTAAGGCATT 59.017 36.000 10.32 0.00 33.51 3.56
115 116 7.142680 GTGCACTTGTTTTTAGTAAGGCATTA 58.857 34.615 10.32 0.00 33.51 1.90
116 117 7.812669 GTGCACTTGTTTTTAGTAAGGCATTAT 59.187 33.333 10.32 0.00 33.51 1.28
117 118 7.812191 TGCACTTGTTTTTAGTAAGGCATTATG 59.188 33.333 0.00 0.00 0.00 1.90
118 119 7.275560 GCACTTGTTTTTAGTAAGGCATTATGG 59.724 37.037 0.00 0.00 0.00 2.74
119 120 7.759433 CACTTGTTTTTAGTAAGGCATTATGGG 59.241 37.037 0.00 0.00 0.00 4.00
120 121 7.672239 ACTTGTTTTTAGTAAGGCATTATGGGA 59.328 33.333 0.00 0.00 0.00 4.37
121 122 8.602472 TTGTTTTTAGTAAGGCATTATGGGAT 57.398 30.769 0.00 0.00 0.00 3.85
122 123 9.702253 TTGTTTTTAGTAAGGCATTATGGGATA 57.298 29.630 0.00 0.00 0.00 2.59
123 124 9.875708 TGTTTTTAGTAAGGCATTATGGGATAT 57.124 29.630 0.00 0.00 0.00 1.63
153 154 9.653516 AATTTCCCAAAATTCATTTTAGGGTTT 57.346 25.926 20.49 14.47 40.28 3.27
154 155 9.653516 ATTTCCCAAAATTCATTTTAGGGTTTT 57.346 25.926 20.49 11.12 42.37 2.43
311 312 8.746052 AATACATAAATCCAAATGAACTCCGA 57.254 30.769 0.00 0.00 0.00 4.55
312 313 6.683974 ACATAAATCCAAATGAACTCCGAG 57.316 37.500 0.00 0.00 0.00 4.63
313 314 6.414732 ACATAAATCCAAATGAACTCCGAGA 58.585 36.000 1.33 0.00 0.00 4.04
314 315 7.056635 ACATAAATCCAAATGAACTCCGAGAT 58.943 34.615 1.33 0.00 0.00 2.75
315 316 7.557719 ACATAAATCCAAATGAACTCCGAGATT 59.442 33.333 1.33 0.00 0.00 2.40
316 317 6.442513 AAATCCAAATGAACTCCGAGATTC 57.557 37.500 1.33 3.45 0.00 2.52
317 318 4.551702 TCCAAATGAACTCCGAGATTCA 57.448 40.909 1.33 8.80 39.09 2.57
318 319 5.102953 TCCAAATGAACTCCGAGATTCAT 57.897 39.130 15.07 15.07 45.36 2.57
326 327 8.600449 ATGAACTCCGAGATTCATTAGAAATC 57.400 34.615 15.07 0.00 41.69 2.17
327 328 7.555965 TGAACTCCGAGATTCATTAGAAATCA 58.444 34.615 1.33 0.00 37.29 2.57
328 329 8.040727 TGAACTCCGAGATTCATTAGAAATCAA 58.959 33.333 1.33 0.00 37.29 2.57
329 330 8.792830 AACTCCGAGATTCATTAGAAATCAAA 57.207 30.769 1.33 0.00 37.29 2.69
330 331 8.792830 ACTCCGAGATTCATTAGAAATCAAAA 57.207 30.769 1.33 0.00 37.29 2.44
331 332 9.401058 ACTCCGAGATTCATTAGAAATCAAAAT 57.599 29.630 1.33 0.00 37.29 1.82
395 396 8.110860 TGGAAAAGTCATTTTATTCTCACTCC 57.889 34.615 0.00 0.00 38.74 3.85
396 397 7.723616 TGGAAAAGTCATTTTATTCTCACTCCA 59.276 33.333 0.00 0.00 38.74 3.86
397 398 8.743714 GGAAAAGTCATTTTATTCTCACTCCAT 58.256 33.333 0.00 0.00 38.74 3.41
411 412 9.865321 ATTCTCACTCCATTTATTTGAATGTTG 57.135 29.630 0.00 0.00 35.68 3.33
412 413 8.408043 TCTCACTCCATTTATTTGAATGTTGT 57.592 30.769 0.00 0.00 35.68 3.32
413 414 8.859090 TCTCACTCCATTTATTTGAATGTTGTT 58.141 29.630 0.00 0.00 35.68 2.83
414 415 9.480053 CTCACTCCATTTATTTGAATGTTGTTT 57.520 29.630 0.00 0.00 35.68 2.83
415 416 9.474920 TCACTCCATTTATTTGAATGTTGTTTC 57.525 29.630 0.00 0.00 35.68 2.78
416 417 9.258826 CACTCCATTTATTTGAATGTTGTTTCA 57.741 29.630 0.00 0.00 35.68 2.69
417 418 9.829507 ACTCCATTTATTTGAATGTTGTTTCAA 57.170 25.926 0.00 0.00 42.33 2.69
450 451 9.859427 TCAAAAGATACCAAATGAAATGACATC 57.141 29.630 0.00 0.00 0.00 3.06
451 452 9.090692 CAAAAGATACCAAATGAAATGACATCC 57.909 33.333 0.00 0.00 0.00 3.51
452 453 7.959658 AAGATACCAAATGAAATGACATCCA 57.040 32.000 0.00 0.00 0.00 3.41
453 454 8.543293 AAGATACCAAATGAAATGACATCCAT 57.457 30.769 0.00 0.00 36.99 3.41
454 455 8.543293 AGATACCAAATGAAATGACATCCATT 57.457 30.769 9.12 9.12 46.86 3.16
475 476 9.859152 TCCATTTTGAAATTTTGAATAAACCCT 57.141 25.926 0.00 0.00 0.00 4.34
481 482 8.669946 TGAAATTTTGAATAAACCCTTCAACC 57.330 30.769 0.00 0.00 41.10 3.77
482 483 8.267894 TGAAATTTTGAATAAACCCTTCAACCA 58.732 29.630 0.00 0.00 41.10 3.67
483 484 9.114952 GAAATTTTGAATAAACCCTTCAACCAA 57.885 29.630 0.00 0.00 41.10 3.67
484 485 8.675705 AATTTTGAATAAACCCTTCAACCAAG 57.324 30.769 0.00 0.00 41.10 3.61
485 486 7.425224 TTTTGAATAAACCCTTCAACCAAGA 57.575 32.000 0.00 0.00 41.10 3.02
486 487 7.610580 TTTGAATAAACCCTTCAACCAAGAT 57.389 32.000 0.00 0.00 41.10 2.40
487 488 7.610580 TTGAATAAACCCTTCAACCAAGATT 57.389 32.000 0.00 0.00 37.61 2.40
488 489 7.610580 TGAATAAACCCTTCAACCAAGATTT 57.389 32.000 0.00 0.00 33.29 2.17
489 490 8.028652 TGAATAAACCCTTCAACCAAGATTTT 57.971 30.769 0.00 0.00 33.29 1.82
490 491 8.490311 TGAATAAACCCTTCAACCAAGATTTTT 58.510 29.630 0.00 0.00 33.29 1.94
796 797 3.297620 GGGGGTGCACACAAGCAG 61.298 66.667 22.94 0.00 46.69 4.24
797 798 2.203337 GGGGTGCACACAAGCAGA 60.203 61.111 22.94 0.00 46.69 4.26
798 799 1.604593 GGGGTGCACACAAGCAGAT 60.605 57.895 22.94 0.00 46.69 2.90
799 800 1.582968 GGGTGCACACAAGCAGATG 59.417 57.895 20.43 0.00 46.69 2.90
800 801 0.890542 GGGTGCACACAAGCAGATGA 60.891 55.000 20.43 0.00 46.69 2.92
801 802 1.171308 GGTGCACACAAGCAGATGAT 58.829 50.000 20.43 0.00 46.69 2.45
802 803 1.131883 GGTGCACACAAGCAGATGATC 59.868 52.381 20.43 0.00 46.69 2.92
803 804 1.808343 GTGCACACAAGCAGATGATCA 59.192 47.619 13.17 0.00 46.69 2.92
804 805 2.422479 GTGCACACAAGCAGATGATCAT 59.578 45.455 13.17 8.25 46.69 2.45
805 806 3.624410 GTGCACACAAGCAGATGATCATA 59.376 43.478 13.17 0.00 46.69 2.15
806 807 4.095334 GTGCACACAAGCAGATGATCATAA 59.905 41.667 13.17 0.00 46.69 1.90
807 808 4.885325 TGCACACAAGCAGATGATCATAAT 59.115 37.500 8.54 0.00 40.11 1.28
808 809 5.008316 TGCACACAAGCAGATGATCATAATC 59.992 40.000 8.54 0.00 40.11 1.75
809 810 5.562307 GCACACAAGCAGATGATCATAATCC 60.562 44.000 8.54 0.00 0.00 3.01
810 811 5.763698 CACACAAGCAGATGATCATAATCCT 59.236 40.000 8.54 0.00 0.00 3.24
811 812 6.262496 CACACAAGCAGATGATCATAATCCTT 59.738 38.462 8.54 6.39 0.00 3.36
812 813 6.832384 ACACAAGCAGATGATCATAATCCTTT 59.168 34.615 8.54 0.00 0.00 3.11
813 814 7.994911 ACACAAGCAGATGATCATAATCCTTTA 59.005 33.333 8.54 0.00 0.00 1.85
814 815 8.843262 CACAAGCAGATGATCATAATCCTTTAA 58.157 33.333 8.54 0.00 0.00 1.52
815 816 8.844244 ACAAGCAGATGATCATAATCCTTTAAC 58.156 33.333 8.54 0.00 0.00 2.01
816 817 8.843262 CAAGCAGATGATCATAATCCTTTAACA 58.157 33.333 8.54 0.00 0.00 2.41
817 818 9.584008 AAGCAGATGATCATAATCCTTTAACAT 57.416 29.630 8.54 0.00 0.00 2.71
818 819 9.228949 AGCAGATGATCATAATCCTTTAACATC 57.771 33.333 8.54 0.00 34.01 3.06
819 820 8.173775 GCAGATGATCATAATCCTTTAACATCG 58.826 37.037 8.54 0.00 37.34 3.84
820 821 8.173775 CAGATGATCATAATCCTTTAACATCGC 58.826 37.037 8.54 0.00 37.34 4.58
821 822 8.099537 AGATGATCATAATCCTTTAACATCGCT 58.900 33.333 8.54 0.00 37.34 4.93
822 823 8.627208 ATGATCATAATCCTTTAACATCGCTT 57.373 30.769 6.36 0.00 0.00 4.68
823 824 8.087982 TGATCATAATCCTTTAACATCGCTTC 57.912 34.615 0.00 0.00 0.00 3.86
824 825 7.714813 TGATCATAATCCTTTAACATCGCTTCA 59.285 33.333 0.00 0.00 0.00 3.02
825 826 8.627208 ATCATAATCCTTTAACATCGCTTCAT 57.373 30.769 0.00 0.00 0.00 2.57
826 827 8.087982 TCATAATCCTTTAACATCGCTTCATC 57.912 34.615 0.00 0.00 0.00 2.92
827 828 7.714813 TCATAATCCTTTAACATCGCTTCATCA 59.285 33.333 0.00 0.00 0.00 3.07
828 829 6.757897 AATCCTTTAACATCGCTTCATCAA 57.242 33.333 0.00 0.00 0.00 2.57
829 830 6.949352 ATCCTTTAACATCGCTTCATCAAT 57.051 33.333 0.00 0.00 0.00 2.57
830 831 8.450578 AATCCTTTAACATCGCTTCATCAATA 57.549 30.769 0.00 0.00 0.00 1.90
831 832 8.627208 ATCCTTTAACATCGCTTCATCAATAT 57.373 30.769 0.00 0.00 0.00 1.28
832 833 9.725019 ATCCTTTAACATCGCTTCATCAATATA 57.275 29.630 0.00 0.00 0.00 0.86
833 834 9.208022 TCCTTTAACATCGCTTCATCAATATAG 57.792 33.333 0.00 0.00 0.00 1.31
834 835 9.208022 CCTTTAACATCGCTTCATCAATATAGA 57.792 33.333 0.00 0.00 0.00 1.98
845 846 8.416329 GCTTCATCAATATAGAACACCCAATTT 58.584 33.333 0.00 0.00 0.00 1.82
878 883 4.408182 TCTCACTAGCTAGGAATTTGGC 57.592 45.455 24.35 0.00 0.00 4.52
1023 1045 1.942677 CAGATGCTGCTCTCCTTCTG 58.057 55.000 0.00 0.76 0.00 3.02
1134 1156 4.928615 GCAGTGCCAGATAAGATGATACTC 59.071 45.833 2.85 0.00 0.00 2.59
1197 1219 1.021202 TTGACAGGAAAGGTTGCACG 58.979 50.000 0.00 0.00 0.00 5.34
1341 1378 4.715534 TTTCACTAAATGTCAGGACCCA 57.284 40.909 0.00 0.00 0.00 4.51
1466 1512 5.517770 GTGATGTTCCTGCAAAAGATTATGC 59.482 40.000 0.00 0.00 42.86 3.14
1564 1611 9.449719 GAAATAGAGAAATCTTGGTGAGGTTAA 57.550 33.333 0.00 0.00 0.00 2.01
1785 1832 8.585189 AGAAGAAAGAATTTGATGCTGAAAAC 57.415 30.769 0.00 0.00 39.27 2.43
2064 2129 7.172019 GCATTTCCAAGAACTGAAAATCACATT 59.828 33.333 0.00 0.00 34.43 2.71
2080 7243 5.895636 TCACATTTGCCCATTAGTGTTAG 57.104 39.130 0.00 0.00 0.00 2.34
2337 7500 3.074390 TGTTCCCAGAAGACCACATGATT 59.926 43.478 0.00 0.00 0.00 2.57
2370 7533 2.325583 TGATTAGATTGTGGGTCGCC 57.674 50.000 0.00 0.00 0.00 5.54
2426 7589 6.547510 AGTTTAGAAGATGTTGCTGAAGGTTT 59.452 34.615 0.00 0.00 0.00 3.27
2543 7708 6.044682 GTGAATTAGCCATTTTCCAATCCAG 58.955 40.000 0.00 0.00 0.00 3.86
2706 7877 1.655484 TCAGCAGTAACATGGCATCG 58.345 50.000 0.00 0.00 0.00 3.84
2755 7926 1.271054 ACCTTGCTGTGTTGGAGCTAG 60.271 52.381 0.00 0.00 38.54 3.42
2775 7946 5.011125 GCTAGCAGGATTACCTATTGAGACA 59.989 44.000 10.63 0.00 45.94 3.41
2789 7960 6.976925 CCTATTGAGACAATTCCAAATTCAGC 59.023 38.462 2.40 0.00 0.00 4.26
2796 7967 1.923356 TTCCAAATTCAGCTGGGGAC 58.077 50.000 15.13 0.00 33.19 4.46
2853 8024 4.202673 ACCAATGTGAAGGTACTCCCAAAT 60.203 41.667 0.00 0.00 38.49 2.32
2904 8075 8.908786 AAACATTGAGTCTTCAAGATACAGAA 57.091 30.769 0.00 0.00 45.89 3.02
2973 8144 7.432869 GGCACATTTGGATGTATAAATTGCTA 58.567 34.615 0.37 0.00 44.55 3.49
3061 8232 3.978718 AGAACTTGCAAACTCTGAAGC 57.021 42.857 0.00 0.00 0.00 3.86
3083 8254 4.789802 GCCAGTTTGTGCTAGTGAAGTTTC 60.790 45.833 0.00 0.00 0.00 2.78
3088 8259 2.101750 TGTGCTAGTGAAGTTTCCGTCA 59.898 45.455 0.00 0.00 0.00 4.35
3112 8283 9.066892 TCACAAAACTAGCAAATTTATCTCAGT 57.933 29.630 0.00 0.00 0.00 3.41
3162 8333 0.239347 GCATCCACTGTGCACAACTC 59.761 55.000 21.98 2.35 42.08 3.01
3179 8350 4.937620 ACAACTCTGTGCATCGTTATCAAT 59.062 37.500 0.00 0.00 33.30 2.57
3246 8417 1.881973 GATGTGCTCCAGCTTGAAACA 59.118 47.619 5.70 5.70 42.66 2.83
3291 8462 1.383523 AGCTCTTTTTATCAGGGCGC 58.616 50.000 0.00 0.00 43.18 6.53
3380 8551 3.884774 TTGGTCCCAGCTTGCGGT 61.885 61.111 0.00 0.00 0.00 5.68
3462 8633 3.884091 CGTATACTGGACAGGAGCTAACT 59.116 47.826 4.14 0.00 0.00 2.24
3466 8637 3.744660 ACTGGACAGGAGCTAACTTTTG 58.255 45.455 4.14 0.00 0.00 2.44
3469 8640 4.326826 TGGACAGGAGCTAACTTTTGATG 58.673 43.478 0.00 0.00 0.00 3.07
3475 8646 3.376546 GGAGCTAACTTTTGATGCAGAGG 59.623 47.826 0.00 0.00 0.00 3.69
3499 8670 6.406961 GGGGTTCCCAAATGTGAAGATTATTC 60.407 42.308 10.25 0.00 44.65 1.75
3500 8671 6.154363 GGGTTCCCAAATGTGAAGATTATTCA 59.846 38.462 2.59 0.00 0.00 2.57
3501 8672 7.260603 GGTTCCCAAATGTGAAGATTATTCAG 58.739 38.462 0.00 0.00 0.00 3.02
3517 8688 9.445878 AGATTATTCAGTTGTATGATATGCCAG 57.554 33.333 0.00 0.00 0.00 4.85
3555 8726 1.053424 TACACGAGGGAGCTTTGGTT 58.947 50.000 0.00 0.00 0.00 3.67
3571 8742 2.650322 TGGTTCGCCTTGAAGAACTTT 58.350 42.857 8.02 0.00 44.33 2.66
3661 8843 6.295462 GGCATGGTTTTATGATATGCATCCTT 60.295 38.462 0.19 0.00 44.33 3.36
3672 8854 8.701908 ATGATATGCATCCTTGTTTCATAAGT 57.298 30.769 0.19 0.00 28.85 2.24
3687 8869 4.127171 TCATAAGTAATCTTGAAGCGGCC 58.873 43.478 0.00 0.00 35.36 6.13
3709 8891 5.594725 GCCAGACTAGATCATATCCCGATAA 59.405 44.000 0.00 0.00 0.00 1.75
3735 8917 7.695869 CTTCTACAGGACAATACGGTAATTC 57.304 40.000 0.00 0.00 0.00 2.17
3752 8941 4.322057 AATTCAACCATCCTAGCCAACT 57.678 40.909 0.00 0.00 0.00 3.16
3760 8949 5.316987 ACCATCCTAGCCAACTTATTATGC 58.683 41.667 0.00 0.00 0.00 3.14
3763 8952 6.471146 CATCCTAGCCAACTTATTATGCTCT 58.529 40.000 0.00 0.00 33.63 4.09
3768 8958 5.363939 AGCCAACTTATTATGCTCTCACTC 58.636 41.667 0.00 0.00 0.00 3.51
3776 8966 4.476628 TTATGCTCTCACTCTTCATGCA 57.523 40.909 0.00 0.00 0.00 3.96
3783 8973 3.688185 TCTCACTCTTCATGCAATTCAGC 59.312 43.478 0.00 0.00 0.00 4.26
3821 9015 4.925646 CCTGCACCAAATTCTAGCTTTTTC 59.074 41.667 0.00 0.00 0.00 2.29
3829 9023 9.077885 ACCAAATTCTAGCTTTTTCAGTTGATA 57.922 29.630 0.00 0.00 0.00 2.15
3838 9032 6.269769 AGCTTTTTCAGTTGATAAAATCCCCA 59.730 34.615 0.70 0.00 0.00 4.96
3840 9034 7.607607 GCTTTTTCAGTTGATAAAATCCCCATT 59.392 33.333 0.70 0.00 0.00 3.16
3849 9043 2.477845 AAATCCCCATTTGTTGCAGC 57.522 45.000 0.00 0.00 30.49 5.25
3852 9046 0.112995 TCCCCATTTGTTGCAGCTCT 59.887 50.000 1.17 0.00 0.00 4.09
3890 9084 1.496857 TCTTGTGTGGATGGGGTTTGA 59.503 47.619 0.00 0.00 0.00 2.69
3898 9092 3.056607 GTGGATGGGGTTTGAAGTCATTG 60.057 47.826 0.00 0.00 0.00 2.82
3900 9094 4.202620 TGGATGGGGTTTGAAGTCATTGTA 60.203 41.667 0.00 0.00 0.00 2.41
3901 9095 4.770010 GGATGGGGTTTGAAGTCATTGTAA 59.230 41.667 0.00 0.00 0.00 2.41
3907 9101 5.391629 GGGTTTGAAGTCATTGTAATCGGTC 60.392 44.000 0.00 0.00 0.00 4.79
3910 9104 5.147330 TGAAGTCATTGTAATCGGTCAGT 57.853 39.130 0.00 0.00 0.00 3.41
3913 9107 4.495422 AGTCATTGTAATCGGTCAGTGAC 58.505 43.478 15.24 15.24 45.20 3.67
3914 9108 4.021456 AGTCATTGTAATCGGTCAGTGACA 60.021 41.667 24.20 5.66 46.33 3.58
3915 9109 4.688879 GTCATTGTAATCGGTCAGTGACAA 59.311 41.667 24.20 12.33 44.67 3.18
3916 9110 4.688879 TCATTGTAATCGGTCAGTGACAAC 59.311 41.667 24.20 13.47 33.68 3.32
3917 9111 4.330944 TTGTAATCGGTCAGTGACAACT 57.669 40.909 24.20 8.36 36.98 3.16
3924 9118 3.357079 CAGTGACAACTGCCGCCC 61.357 66.667 0.00 0.00 46.98 6.13
3925 9119 3.872603 AGTGACAACTGCCGCCCA 61.873 61.111 0.00 0.00 34.48 5.36
3933 9170 3.515286 CTGCCGCCCATCTTGCTG 61.515 66.667 0.00 0.00 0.00 4.41
3939 9176 1.475751 CCGCCCATCTTGCTGTTATCT 60.476 52.381 0.00 0.00 0.00 1.98
3984 9228 5.957842 CAACTGGTTTGTAATAAGGCAGA 57.042 39.130 0.00 0.00 0.00 4.26
4002 9246 4.581824 GGCAGAGGAATGATTTCTATTGCA 59.418 41.667 18.52 0.00 35.17 4.08
4011 9255 3.633525 TGATTTCTATTGCAGCCATCCAC 59.366 43.478 0.00 0.00 0.00 4.02
4016 9260 0.974010 ATTGCAGCCATCCACCTTGG 60.974 55.000 0.00 0.00 39.43 3.61
4033 9277 6.265577 CACCTTGGCTTTACAGTATTTATGC 58.734 40.000 0.00 0.00 0.00 3.14
4040 9284 8.044309 TGGCTTTACAGTATTTATGCTTAGTGA 58.956 33.333 0.00 0.00 0.00 3.41
4163 9413 7.669722 AGAGAAAACAATCCTTATTTGCCACTA 59.330 33.333 0.00 0.00 0.00 2.74
4169 9424 6.155049 ACAATCCTTATTTGCCACTAAATGCT 59.845 34.615 0.00 0.00 32.79 3.79
4171 9426 6.693315 TCCTTATTTGCCACTAAATGCTAC 57.307 37.500 0.00 0.00 32.79 3.58
4182 9437 3.995506 AATGCTACGCCCCAGTGCC 62.996 63.158 0.00 0.00 0.00 5.01
4185 9440 2.436646 CTACGCCCCAGTGCCAAG 60.437 66.667 0.00 0.00 0.00 3.61
4186 9441 2.925706 TACGCCCCAGTGCCAAGA 60.926 61.111 0.00 0.00 0.00 3.02
4187 9442 2.463589 CTACGCCCCAGTGCCAAGAA 62.464 60.000 0.00 0.00 0.00 2.52
4208 9463 6.685657 AGAAATCTGAACTTTTTGCTCATCC 58.314 36.000 0.00 0.00 0.00 3.51
4223 9478 1.617536 ATCCTCTGGGGCTGCTGAA 60.618 57.895 0.00 0.00 34.39 3.02
4248 9503 7.830739 AGTTCAGAACTTCACATTTCAGTTTT 58.169 30.769 10.27 0.00 39.04 2.43
4249 9504 7.756722 AGTTCAGAACTTCACATTTCAGTTTTG 59.243 33.333 10.27 0.00 39.04 2.44
4251 9506 7.028962 TCAGAACTTCACATTTCAGTTTTGTG 58.971 34.615 0.00 0.00 41.60 3.33
4261 9516 5.499139 TTTCAGTTTTGTGTAGCTCTTGG 57.501 39.130 0.00 0.00 0.00 3.61
4288 9550 7.869429 CCTGGGAAATAAATGCTTTATGACATC 59.131 37.037 0.00 0.00 36.06 3.06
4365 9776 0.670162 GCAGATTGGTGCACTGTGTT 59.330 50.000 17.98 0.00 43.41 3.32
4374 9785 3.317711 TGGTGCACTGTGTTTTAGAATGG 59.682 43.478 17.98 0.00 0.00 3.16
4388 9806 3.439857 AGAATGGCATGTACTGGTGTT 57.560 42.857 0.00 0.00 0.00 3.32
4394 9812 5.887214 TGGCATGTACTGGTGTTAGATAT 57.113 39.130 0.00 0.00 0.00 1.63
4419 9842 9.831737 ATGTTTCATTCATACGAGAAAGAAAAG 57.168 29.630 15.81 2.18 42.90 2.27
4425 9848 8.499162 CATTCATACGAGAAAGAAAAGACAGTT 58.501 33.333 0.00 0.00 0.00 3.16
4426 9849 7.408132 TCATACGAGAAAGAAAAGACAGTTG 57.592 36.000 0.00 0.00 0.00 3.16
4427 9850 7.207383 TCATACGAGAAAGAAAAGACAGTTGA 58.793 34.615 0.00 0.00 0.00 3.18
4428 9851 7.709182 TCATACGAGAAAGAAAAGACAGTTGAA 59.291 33.333 0.00 0.00 0.00 2.69
4429 9852 6.737254 ACGAGAAAGAAAAGACAGTTGAAA 57.263 33.333 0.00 0.00 0.00 2.69
4430 9853 6.776094 ACGAGAAAGAAAAGACAGTTGAAAG 58.224 36.000 0.00 0.00 0.00 2.62
4432 9855 6.684555 CGAGAAAGAAAAGACAGTTGAAAGTG 59.315 38.462 0.00 0.00 35.47 3.16
4436 9866 9.620660 GAAAGAAAAGACAGTTGAAAGTGTTTA 57.379 29.630 5.06 0.00 42.36 2.01
4462 9892 1.273269 ATCAGAGGAGGCAGCTGCTT 61.273 55.000 35.82 30.90 41.70 3.91
4468 9898 1.493871 AGGAGGCAGCTGCTTATCATT 59.506 47.619 35.82 19.59 41.70 2.57
4473 9903 3.129988 AGGCAGCTGCTTATCATTGAAAC 59.870 43.478 35.82 15.79 41.70 2.78
4476 9906 4.669318 CAGCTGCTTATCATTGAAACCTG 58.331 43.478 0.00 0.00 0.00 4.00
4479 9909 5.244626 AGCTGCTTATCATTGAAACCTGTTT 59.755 36.000 0.00 0.00 35.14 2.83
4482 9912 7.598493 GCTGCTTATCATTGAAACCTGTTTTTA 59.402 33.333 0.00 0.00 32.11 1.52
4483 9913 9.643693 CTGCTTATCATTGAAACCTGTTTTTAT 57.356 29.630 0.00 0.00 32.11 1.40
4484 9914 9.638239 TGCTTATCATTGAAACCTGTTTTTATC 57.362 29.630 0.00 0.00 32.11 1.75
4485 9915 9.638239 GCTTATCATTGAAACCTGTTTTTATCA 57.362 29.630 0.00 0.00 32.11 2.15
4489 9919 8.870160 TCATTGAAACCTGTTTTTATCAGTTG 57.130 30.769 0.00 0.00 32.11 3.16
4490 9920 7.925483 TCATTGAAACCTGTTTTTATCAGTTGG 59.075 33.333 0.00 0.00 32.11 3.77
4491 9921 5.596845 TGAAACCTGTTTTTATCAGTTGGC 58.403 37.500 0.00 0.00 32.11 4.52
4494 9924 7.232534 TGAAACCTGTTTTTATCAGTTGGCTAT 59.767 33.333 0.00 0.00 32.11 2.97
4495 9925 8.644374 AAACCTGTTTTTATCAGTTGGCTATA 57.356 30.769 0.00 0.00 0.00 1.31
4496 9926 8.644374 AACCTGTTTTTATCAGTTGGCTATAA 57.356 30.769 0.00 0.00 0.00 0.98
4497 9927 8.281212 ACCTGTTTTTATCAGTTGGCTATAAG 57.719 34.615 0.00 0.00 0.00 1.73
4565 9995 2.163818 TTTTCACAGAGCCGTACTGG 57.836 50.000 0.00 0.00 39.38 4.00
4587 10019 3.369261 GGCCTCACATATGCTAGATCCTG 60.369 52.174 1.58 0.00 0.00 3.86
4606 10038 6.713731 TCCTGGAAGAGTTACCCTTTTATT 57.286 37.500 0.00 0.00 34.07 1.40
4607 10039 6.718294 TCCTGGAAGAGTTACCCTTTTATTC 58.282 40.000 0.00 0.00 34.07 1.75
4608 10040 5.585047 CCTGGAAGAGTTACCCTTTTATTCG 59.415 44.000 0.00 0.00 34.07 3.34
4609 10041 6.363167 TGGAAGAGTTACCCTTTTATTCGA 57.637 37.500 0.00 0.00 0.00 3.71
4618 10052 5.174037 ACCCTTTTATTCGATCAGGTGAA 57.826 39.130 0.00 0.00 0.00 3.18
4621 10055 5.066505 CCCTTTTATTCGATCAGGTGAAAGG 59.933 44.000 15.01 15.01 40.79 3.11
4630 10064 2.250031 TCAGGTGAAAGGCATTGCAAT 58.750 42.857 5.99 5.99 0.00 3.56
4631 10065 3.429492 TCAGGTGAAAGGCATTGCAATA 58.571 40.909 12.53 0.00 0.00 1.90
4632 10066 3.444742 TCAGGTGAAAGGCATTGCAATAG 59.555 43.478 12.53 7.98 0.00 1.73
4633 10067 3.194116 CAGGTGAAAGGCATTGCAATAGT 59.806 43.478 12.53 0.00 0.00 2.12
4634 10068 3.834231 AGGTGAAAGGCATTGCAATAGTT 59.166 39.130 12.53 2.99 0.00 2.24
4635 10069 3.928375 GGTGAAAGGCATTGCAATAGTTG 59.072 43.478 12.53 2.09 0.00 3.16
4636 10070 4.559153 GTGAAAGGCATTGCAATAGTTGT 58.441 39.130 12.53 0.00 0.00 3.32
4637 10071 4.990426 GTGAAAGGCATTGCAATAGTTGTT 59.010 37.500 12.53 3.08 0.00 2.83
4638 10072 5.119125 GTGAAAGGCATTGCAATAGTTGTTC 59.881 40.000 12.53 12.14 0.00 3.18
4639 10073 3.492421 AGGCATTGCAATAGTTGTTCG 57.508 42.857 12.53 0.00 0.00 3.95
4640 10074 3.081061 AGGCATTGCAATAGTTGTTCGA 58.919 40.909 12.53 0.00 0.00 3.71
4641 10075 3.505680 AGGCATTGCAATAGTTGTTCGAA 59.494 39.130 12.53 0.00 0.00 3.71
4642 10076 4.158394 AGGCATTGCAATAGTTGTTCGAAT 59.842 37.500 12.53 0.00 0.00 3.34
4643 10077 4.266029 GGCATTGCAATAGTTGTTCGAATG 59.734 41.667 12.53 0.00 0.00 2.67
4644 10078 4.266029 GCATTGCAATAGTTGTTCGAATGG 59.734 41.667 12.53 0.00 0.00 3.16
4645 10079 5.401550 CATTGCAATAGTTGTTCGAATGGT 58.598 37.500 12.53 0.00 0.00 3.55
4646 10080 4.678509 TGCAATAGTTGTTCGAATGGTC 57.321 40.909 0.00 0.00 0.00 4.02
4647 10081 4.323417 TGCAATAGTTGTTCGAATGGTCT 58.677 39.130 0.00 0.96 0.00 3.85
4648 10082 5.483811 TGCAATAGTTGTTCGAATGGTCTA 58.516 37.500 0.00 3.23 0.00 2.59
4649 10083 5.580691 TGCAATAGTTGTTCGAATGGTCTAG 59.419 40.000 0.00 0.00 0.00 2.43
4650 10084 5.581085 GCAATAGTTGTTCGAATGGTCTAGT 59.419 40.000 0.00 0.00 0.00 2.57
4651 10085 6.455646 GCAATAGTTGTTCGAATGGTCTAGTG 60.456 42.308 0.00 12.02 0.00 2.74
4652 10086 3.926616 AGTTGTTCGAATGGTCTAGTGG 58.073 45.455 0.00 0.00 0.00 4.00
4653 10087 3.323979 AGTTGTTCGAATGGTCTAGTGGT 59.676 43.478 0.00 0.00 0.00 4.16
4654 10088 4.062991 GTTGTTCGAATGGTCTAGTGGTT 58.937 43.478 0.00 0.00 0.00 3.67
4655 10089 3.659786 TGTTCGAATGGTCTAGTGGTTG 58.340 45.455 0.00 0.00 0.00 3.77
4656 10090 3.000727 GTTCGAATGGTCTAGTGGTTGG 58.999 50.000 0.00 0.00 0.00 3.77
4657 10091 1.066430 TCGAATGGTCTAGTGGTTGGC 60.066 52.381 0.00 0.00 0.00 4.52
4658 10092 1.066143 CGAATGGTCTAGTGGTTGGCT 60.066 52.381 0.00 0.00 0.00 4.75
4659 10093 2.615493 CGAATGGTCTAGTGGTTGGCTT 60.615 50.000 0.00 0.00 0.00 4.35
4660 10094 2.496899 ATGGTCTAGTGGTTGGCTTG 57.503 50.000 0.00 0.00 0.00 4.01
4661 10095 0.250727 TGGTCTAGTGGTTGGCTTGC 60.251 55.000 0.00 0.00 0.00 4.01
4662 10096 0.250727 GGTCTAGTGGTTGGCTTGCA 60.251 55.000 0.00 0.00 0.00 4.08
4663 10097 1.604604 GTCTAGTGGTTGGCTTGCAA 58.395 50.000 0.00 0.00 0.00 4.08
4664 10098 2.162681 GTCTAGTGGTTGGCTTGCAAT 58.837 47.619 0.00 0.00 0.00 3.56
4665 10099 2.095059 GTCTAGTGGTTGGCTTGCAATG 60.095 50.000 0.00 0.00 0.00 2.82
4666 10100 1.203052 CTAGTGGTTGGCTTGCAATGG 59.797 52.381 0.00 0.00 0.00 3.16
4667 10101 1.668793 GTGGTTGGCTTGCAATGGC 60.669 57.895 0.00 7.54 41.68 4.40
4668 10102 2.432972 GGTTGGCTTGCAATGGCG 60.433 61.111 0.00 0.00 45.35 5.69
4669 10103 3.113979 GTTGGCTTGCAATGGCGC 61.114 61.111 0.00 0.00 45.35 6.53
4670 10104 3.613689 TTGGCTTGCAATGGCGCA 61.614 55.556 10.83 0.00 45.35 6.09
4671 10105 2.945161 TTGGCTTGCAATGGCGCAT 61.945 52.632 10.83 0.00 45.35 4.73
4672 10106 2.584143 GGCTTGCAATGGCGCATC 60.584 61.111 10.83 0.00 45.35 3.91
4673 10107 2.584143 GCTTGCAATGGCGCATCC 60.584 61.111 10.83 0.00 45.35 3.51
4674 10108 3.072486 GCTTGCAATGGCGCATCCT 62.072 57.895 10.83 0.00 45.35 3.24
4675 10109 1.514087 CTTGCAATGGCGCATCCTT 59.486 52.632 10.83 0.00 45.35 3.36
4676 10110 0.740149 CTTGCAATGGCGCATCCTTA 59.260 50.000 10.83 0.00 45.35 2.69
4677 10111 0.455410 TTGCAATGGCGCATCCTTAC 59.545 50.000 10.83 0.00 45.35 2.34
4678 10112 0.394216 TGCAATGGCGCATCCTTACT 60.394 50.000 10.83 0.00 45.35 2.24
4679 10113 1.134250 TGCAATGGCGCATCCTTACTA 60.134 47.619 10.83 0.00 45.35 1.82
4680 10114 1.946768 GCAATGGCGCATCCTTACTAA 59.053 47.619 10.83 0.00 35.26 2.24
4681 10115 2.287009 GCAATGGCGCATCCTTACTAAC 60.287 50.000 10.83 0.00 35.26 2.34
4682 10116 2.256117 ATGGCGCATCCTTACTAACC 57.744 50.000 10.83 0.00 35.26 2.85
4683 10117 0.906066 TGGCGCATCCTTACTAACCA 59.094 50.000 10.83 0.00 35.26 3.67
4684 10118 1.134521 TGGCGCATCCTTACTAACCAG 60.135 52.381 10.83 0.00 35.26 4.00
4685 10119 1.583054 GCGCATCCTTACTAACCAGG 58.417 55.000 0.30 0.00 0.00 4.45
4686 10120 1.810412 GCGCATCCTTACTAACCAGGG 60.810 57.143 0.30 0.00 0.00 4.45
4687 10121 1.485066 CGCATCCTTACTAACCAGGGT 59.515 52.381 0.00 0.00 0.00 4.34
4688 10122 2.696707 CGCATCCTTACTAACCAGGGTA 59.303 50.000 0.00 0.00 0.00 3.69
4689 10123 3.243771 CGCATCCTTACTAACCAGGGTAG 60.244 52.174 10.35 10.35 0.00 3.18
4690 10124 3.710165 GCATCCTTACTAACCAGGGTAGT 59.290 47.826 21.45 21.45 0.00 2.73
4691 10125 4.202233 GCATCCTTACTAACCAGGGTAGTC 60.202 50.000 21.36 0.80 0.00 2.59
4692 10126 3.986435 TCCTTACTAACCAGGGTAGTCC 58.014 50.000 21.36 0.00 0.00 3.85
4693 10127 2.692041 CCTTACTAACCAGGGTAGTCCG 59.308 54.545 21.36 12.56 41.52 4.79
4694 10128 3.624777 CTTACTAACCAGGGTAGTCCGA 58.375 50.000 21.36 7.68 41.52 4.55
4695 10129 2.610438 ACTAACCAGGGTAGTCCGAA 57.390 50.000 11.91 0.00 41.52 4.30
4696 10130 3.111741 ACTAACCAGGGTAGTCCGAAT 57.888 47.619 11.91 0.00 41.52 3.34
4697 10131 3.029570 ACTAACCAGGGTAGTCCGAATC 58.970 50.000 11.91 0.00 41.52 2.52
4698 10132 1.201424 AACCAGGGTAGTCCGAATCC 58.799 55.000 0.00 0.00 41.52 3.01
4699 10133 0.338814 ACCAGGGTAGTCCGAATCCT 59.661 55.000 0.00 0.00 41.52 3.24
4700 10134 1.572415 ACCAGGGTAGTCCGAATCCTA 59.428 52.381 0.00 0.00 41.52 2.94
4701 10135 2.179424 ACCAGGGTAGTCCGAATCCTAT 59.821 50.000 0.00 0.00 41.52 2.57
4702 10136 2.826725 CCAGGGTAGTCCGAATCCTATC 59.173 54.545 0.00 0.00 41.52 2.08
4703 10137 3.497332 CAGGGTAGTCCGAATCCTATCA 58.503 50.000 0.00 0.00 41.52 2.15
4704 10138 4.090090 CAGGGTAGTCCGAATCCTATCAT 58.910 47.826 0.00 0.00 41.52 2.45
4705 10139 4.081972 CAGGGTAGTCCGAATCCTATCATG 60.082 50.000 0.00 0.00 41.52 3.07
4706 10140 4.087182 GGGTAGTCCGAATCCTATCATGA 58.913 47.826 0.00 0.00 33.83 3.07
4707 10141 4.158764 GGGTAGTCCGAATCCTATCATGAG 59.841 50.000 0.09 0.00 33.83 2.90
4708 10142 3.951775 AGTCCGAATCCTATCATGAGC 57.048 47.619 0.09 0.00 0.00 4.26
4709 10143 2.230025 AGTCCGAATCCTATCATGAGCG 59.770 50.000 0.09 0.00 0.00 5.03
4710 10144 1.546029 TCCGAATCCTATCATGAGCGG 59.454 52.381 0.09 4.07 35.91 5.52
4711 10145 1.404717 CCGAATCCTATCATGAGCGGG 60.405 57.143 11.84 8.62 32.91 6.13
4712 10146 1.273606 CGAATCCTATCATGAGCGGGT 59.726 52.381 11.84 3.53 0.00 5.28
4713 10147 2.492088 CGAATCCTATCATGAGCGGGTA 59.508 50.000 11.84 0.00 0.00 3.69
4714 10148 3.428180 CGAATCCTATCATGAGCGGGTAG 60.428 52.174 11.84 3.80 0.00 3.18
4715 10149 1.924731 TCCTATCATGAGCGGGTAGG 58.075 55.000 11.62 11.62 34.55 3.18
4716 10150 1.427753 TCCTATCATGAGCGGGTAGGA 59.572 52.381 15.21 15.21 38.79 2.94
4717 10151 2.043115 TCCTATCATGAGCGGGTAGGAT 59.957 50.000 15.21 0.00 36.81 3.24
4718 10152 2.428890 CCTATCATGAGCGGGTAGGATC 59.571 54.545 12.27 0.00 35.08 3.36
4719 10153 2.317371 ATCATGAGCGGGTAGGATCT 57.683 50.000 0.09 0.00 0.00 2.75
4720 10154 2.971901 TCATGAGCGGGTAGGATCTA 57.028 50.000 0.00 0.00 0.00 1.98
4721 10155 3.458044 TCATGAGCGGGTAGGATCTAT 57.542 47.619 0.00 0.00 0.00 1.98
4722 10156 3.357203 TCATGAGCGGGTAGGATCTATC 58.643 50.000 0.00 0.00 0.00 2.08
4723 10157 3.010696 TCATGAGCGGGTAGGATCTATCT 59.989 47.826 0.00 0.00 0.00 1.98
4724 10158 3.527507 TGAGCGGGTAGGATCTATCTT 57.472 47.619 0.00 0.00 0.00 2.40
4725 10159 4.652679 TGAGCGGGTAGGATCTATCTTA 57.347 45.455 0.00 0.00 0.00 2.10
4726 10160 5.194473 TGAGCGGGTAGGATCTATCTTAT 57.806 43.478 0.00 0.00 0.00 1.73
4727 10161 5.580998 TGAGCGGGTAGGATCTATCTTATT 58.419 41.667 0.00 0.00 0.00 1.40
4728 10162 6.017192 TGAGCGGGTAGGATCTATCTTATTT 58.983 40.000 0.00 0.00 0.00 1.40
4729 10163 7.179966 TGAGCGGGTAGGATCTATCTTATTTA 58.820 38.462 0.00 0.00 0.00 1.40
4730 10164 7.672660 TGAGCGGGTAGGATCTATCTTATTTAA 59.327 37.037 0.00 0.00 0.00 1.52
4731 10165 8.431910 AGCGGGTAGGATCTATCTTATTTAAA 57.568 34.615 0.00 0.00 0.00 1.52
4732 10166 9.047947 AGCGGGTAGGATCTATCTTATTTAAAT 57.952 33.333 5.89 5.89 0.00 1.40
4733 10167 9.668497 GCGGGTAGGATCTATCTTATTTAAATT 57.332 33.333 5.91 0.00 0.00 1.82
4742 10176 9.878599 ATCTATCTTATTTAAATTCAAACGGCG 57.121 29.630 4.80 4.80 0.00 6.46
4743 10177 6.806120 ATCTTATTTAAATTCAAACGGCGC 57.194 33.333 6.90 0.00 0.00 6.53
4744 10178 5.945155 TCTTATTTAAATTCAAACGGCGCT 58.055 33.333 6.90 0.00 0.00 5.92
4745 10179 6.025280 TCTTATTTAAATTCAAACGGCGCTC 58.975 36.000 6.90 0.00 0.00 5.03
4746 10180 2.622546 TTAAATTCAAACGGCGCTCC 57.377 45.000 6.90 0.00 0.00 4.70
4747 10181 1.816074 TAAATTCAAACGGCGCTCCT 58.184 45.000 6.90 0.00 0.00 3.69
4748 10182 0.958822 AAATTCAAACGGCGCTCCTT 59.041 45.000 6.90 0.00 0.00 3.36
4749 10183 0.521735 AATTCAAACGGCGCTCCTTC 59.478 50.000 6.90 0.00 0.00 3.46
4750 10184 1.305930 ATTCAAACGGCGCTCCTTCC 61.306 55.000 6.90 0.00 0.00 3.46
4769 10203 4.908601 TCCGCATTGGACCATTCTATAT 57.091 40.909 0.00 0.00 43.74 0.86
4770 10204 4.578871 TCCGCATTGGACCATTCTATATG 58.421 43.478 0.00 0.00 43.74 1.78
4771 10205 4.285775 TCCGCATTGGACCATTCTATATGA 59.714 41.667 5.87 0.00 43.74 2.15
4772 10206 5.003160 CCGCATTGGACCATTCTATATGAA 58.997 41.667 5.87 0.00 42.00 2.57
4773 10207 5.473162 CCGCATTGGACCATTCTATATGAAA 59.527 40.000 5.87 0.00 42.00 2.69
4774 10208 6.151648 CCGCATTGGACCATTCTATATGAAAT 59.848 38.462 5.87 0.00 42.00 2.17
4775 10209 7.025365 CGCATTGGACCATTCTATATGAAATG 58.975 38.462 5.87 0.00 38.29 2.32
4776 10210 6.810182 GCATTGGACCATTCTATATGAAATGC 59.190 38.462 5.87 4.99 38.29 3.56
4777 10211 7.524202 GCATTGGACCATTCTATATGAAATGCA 60.524 37.037 12.34 0.00 38.14 3.96
4778 10212 8.528643 CATTGGACCATTCTATATGAAATGCAT 58.471 33.333 0.00 0.00 38.29 3.96
4779 10213 7.457024 TGGACCATTCTATATGAAATGCATG 57.543 36.000 0.00 0.00 38.29 4.06
4780 10214 6.434965 TGGACCATTCTATATGAAATGCATGG 59.565 38.462 0.00 0.00 38.29 3.66
4781 10215 6.127535 GGACCATTCTATATGAAATGCATGGG 60.128 42.308 0.00 0.00 38.29 4.00
4782 10216 6.317312 ACCATTCTATATGAAATGCATGGGT 58.683 36.000 0.00 0.00 38.29 4.51
4783 10217 6.209986 ACCATTCTATATGAAATGCATGGGTG 59.790 38.462 0.00 0.00 38.29 4.61
4784 10218 6.209986 CCATTCTATATGAAATGCATGGGTGT 59.790 38.462 0.00 0.00 38.29 4.16
4785 10219 6.638096 TTCTATATGAAATGCATGGGTGTG 57.362 37.500 0.00 0.00 37.87 3.82
4786 10220 5.939447 TCTATATGAAATGCATGGGTGTGA 58.061 37.500 0.00 0.00 37.87 3.58
4787 10221 6.363882 TCTATATGAAATGCATGGGTGTGAA 58.636 36.000 0.00 0.00 37.87 3.18
4788 10222 7.005902 TCTATATGAAATGCATGGGTGTGAAT 58.994 34.615 0.00 0.00 37.87 2.57
4789 10223 8.162746 TCTATATGAAATGCATGGGTGTGAATA 58.837 33.333 0.00 0.00 37.87 1.75
4790 10224 5.936187 ATGAAATGCATGGGTGTGAATAA 57.064 34.783 0.00 0.00 35.42 1.40
4791 10225 5.070770 TGAAATGCATGGGTGTGAATAAC 57.929 39.130 0.00 0.00 0.00 1.89
4792 10226 4.771577 TGAAATGCATGGGTGTGAATAACT 59.228 37.500 0.00 0.00 0.00 2.24
4793 10227 4.989279 AATGCATGGGTGTGAATAACTC 57.011 40.909 0.00 0.00 0.00 3.01
4794 10228 3.719268 TGCATGGGTGTGAATAACTCT 57.281 42.857 0.00 0.00 0.00 3.24
4795 10229 3.346315 TGCATGGGTGTGAATAACTCTG 58.654 45.455 0.00 0.00 0.00 3.35
4796 10230 3.008923 TGCATGGGTGTGAATAACTCTGA 59.991 43.478 0.00 0.00 0.00 3.27
4797 10231 4.009675 GCATGGGTGTGAATAACTCTGAA 58.990 43.478 0.00 0.00 0.00 3.02
4798 10232 4.458989 GCATGGGTGTGAATAACTCTGAAA 59.541 41.667 0.00 0.00 0.00 2.69
4799 10233 5.126061 GCATGGGTGTGAATAACTCTGAAAT 59.874 40.000 0.00 0.00 0.00 2.17
4800 10234 6.350445 GCATGGGTGTGAATAACTCTGAAATT 60.350 38.462 0.00 0.00 0.00 1.82
4801 10235 7.605449 CATGGGTGTGAATAACTCTGAAATTT 58.395 34.615 0.00 0.00 0.00 1.82
4802 10236 6.980593 TGGGTGTGAATAACTCTGAAATTTG 58.019 36.000 0.00 0.00 0.00 2.32
4803 10237 6.015519 TGGGTGTGAATAACTCTGAAATTTGG 60.016 38.462 0.00 0.00 0.00 3.28
4804 10238 6.015434 GGGTGTGAATAACTCTGAAATTTGGT 60.015 38.462 0.00 0.00 0.00 3.67
4805 10239 7.433680 GGTGTGAATAACTCTGAAATTTGGTT 58.566 34.615 0.00 0.00 0.00 3.67
4806 10240 7.926018 GGTGTGAATAACTCTGAAATTTGGTTT 59.074 33.333 0.00 0.00 0.00 3.27
4807 10241 9.959749 GTGTGAATAACTCTGAAATTTGGTTTA 57.040 29.630 0.00 0.00 0.00 2.01
4808 10242 9.959749 TGTGAATAACTCTGAAATTTGGTTTAC 57.040 29.630 0.00 0.00 0.00 2.01
4809 10243 9.959749 GTGAATAACTCTGAAATTTGGTTTACA 57.040 29.630 0.00 0.00 0.00 2.41
4813 10247 9.927668 ATAACTCTGAAATTTGGTTTACATTGG 57.072 29.630 0.00 0.00 0.00 3.16
4814 10248 7.595819 ACTCTGAAATTTGGTTTACATTGGA 57.404 32.000 0.00 0.00 0.00 3.53
4815 10249 8.017418 ACTCTGAAATTTGGTTTACATTGGAA 57.983 30.769 0.00 0.00 0.00 3.53
4816 10250 8.482128 ACTCTGAAATTTGGTTTACATTGGAAA 58.518 29.630 0.00 0.00 0.00 3.13
4817 10251 8.655651 TCTGAAATTTGGTTTACATTGGAAAC 57.344 30.769 14.96 14.96 36.29 2.78
4818 10252 8.482128 TCTGAAATTTGGTTTACATTGGAAACT 58.518 29.630 20.94 3.35 37.05 2.66
4819 10253 8.655651 TGAAATTTGGTTTACATTGGAAACTC 57.344 30.769 20.94 13.07 37.05 3.01
4820 10254 8.482128 TGAAATTTGGTTTACATTGGAAACTCT 58.518 29.630 20.94 4.29 37.05 3.24
4821 10255 9.325198 GAAATTTGGTTTACATTGGAAACTCTT 57.675 29.630 20.94 9.50 37.05 2.85
4822 10256 8.661352 AATTTGGTTTACATTGGAAACTCTTG 57.339 30.769 20.94 0.00 37.05 3.02
4823 10257 6.783708 TTGGTTTACATTGGAAACTCTTGT 57.216 33.333 20.94 0.00 37.05 3.16
4824 10258 6.783708 TGGTTTACATTGGAAACTCTTGTT 57.216 33.333 20.94 0.00 37.05 2.83
4825 10259 6.568869 TGGTTTACATTGGAAACTCTTGTTG 58.431 36.000 20.94 0.00 37.05 3.33
4826 10260 5.462068 GGTTTACATTGGAAACTCTTGTTGC 59.538 40.000 20.94 1.82 37.05 4.17
4832 10266 3.084070 GGAAACTCTTGTTGCCTGTTG 57.916 47.619 0.00 0.00 46.26 3.33
4833 10267 2.223805 GGAAACTCTTGTTGCCTGTTGG 60.224 50.000 0.00 0.00 46.26 3.77
4834 10268 2.143876 AACTCTTGTTGCCTGTTGGT 57.856 45.000 0.00 0.00 34.71 3.67
4835 10269 2.143876 ACTCTTGTTGCCTGTTGGTT 57.856 45.000 0.00 0.00 35.27 3.67
4836 10270 2.024414 ACTCTTGTTGCCTGTTGGTTC 58.976 47.619 0.00 0.00 35.27 3.62
4837 10271 2.023673 CTCTTGTTGCCTGTTGGTTCA 58.976 47.619 0.00 0.00 35.27 3.18
4838 10272 1.748493 TCTTGTTGCCTGTTGGTTCAC 59.252 47.619 0.00 0.00 35.27 3.18
4839 10273 0.453793 TTGTTGCCTGTTGGTTCACG 59.546 50.000 0.00 0.00 35.27 4.35
4840 10274 0.678366 TGTTGCCTGTTGGTTCACGT 60.678 50.000 0.00 0.00 35.27 4.49
4841 10275 0.248458 GTTGCCTGTTGGTTCACGTG 60.248 55.000 9.94 9.94 35.27 4.49
4842 10276 0.393132 TTGCCTGTTGGTTCACGTGA 60.393 50.000 15.76 15.76 35.27 4.35
4843 10277 0.813610 TGCCTGTTGGTTCACGTGAG 60.814 55.000 19.11 5.58 35.27 3.51
4844 10278 0.814010 GCCTGTTGGTTCACGTGAGT 60.814 55.000 19.11 0.00 39.79 3.41
4845 10279 1.539496 GCCTGTTGGTTCACGTGAGTA 60.539 52.381 19.11 1.40 38.04 2.59
4846 10280 3.685057 GCCTGTTGGTTCACGTGAGTAC 61.685 54.545 19.11 14.77 38.04 2.73
4858 10292 4.316205 ACGTGAGTACACTTCATGACAA 57.684 40.909 9.19 0.00 46.88 3.18
4859 10293 4.049186 ACGTGAGTACACTTCATGACAAC 58.951 43.478 9.19 0.00 46.88 3.32
4860 10294 3.428870 CGTGAGTACACTTCATGACAACC 59.571 47.826 0.00 0.00 43.99 3.77
4861 10295 4.632153 GTGAGTACACTTCATGACAACCT 58.368 43.478 0.00 0.00 42.99 3.50
4862 10296 4.449068 GTGAGTACACTTCATGACAACCTG 59.551 45.833 0.00 0.00 42.99 4.00
4863 10297 3.997021 GAGTACACTTCATGACAACCTGG 59.003 47.826 0.00 0.00 0.00 4.45
4864 10298 3.391296 AGTACACTTCATGACAACCTGGT 59.609 43.478 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 9.389570 GCACAAGTAAATTTTATTTACGACTGT 57.610 29.630 13.61 14.24 39.25 3.55
68 69 9.388346 TGCACAAGTAAATTTTATTTACGACTG 57.612 29.630 13.61 13.82 39.25 3.51
69 70 9.389570 GTGCACAAGTAAATTTTATTTACGACT 57.610 29.630 13.17 0.00 39.25 4.18
70 71 9.389570 AGTGCACAAGTAAATTTTATTTACGAC 57.610 29.630 21.04 7.50 39.25 4.34
71 72 9.953697 AAGTGCACAAGTAAATTTTATTTACGA 57.046 25.926 21.04 0.00 39.25 3.43
72 73 9.987901 CAAGTGCACAAGTAAATTTTATTTACG 57.012 29.630 21.04 6.30 39.25 3.18
80 81 9.430623 ACTAAAAACAAGTGCACAAGTAAATTT 57.569 25.926 21.04 17.93 0.00 1.82
81 82 8.996024 ACTAAAAACAAGTGCACAAGTAAATT 57.004 26.923 21.04 13.58 0.00 1.82
83 84 9.562583 CTTACTAAAAACAAGTGCACAAGTAAA 57.437 29.630 21.04 2.97 0.00 2.01
84 85 8.185505 CCTTACTAAAAACAAGTGCACAAGTAA 58.814 33.333 21.04 15.51 0.00 2.24
85 86 7.680113 GCCTTACTAAAAACAAGTGCACAAGTA 60.680 37.037 21.04 9.76 0.00 2.24
86 87 6.560711 CCTTACTAAAAACAAGTGCACAAGT 58.439 36.000 21.04 13.99 0.00 3.16
87 88 5.458779 GCCTTACTAAAAACAAGTGCACAAG 59.541 40.000 21.04 13.28 0.00 3.16
88 89 5.105716 TGCCTTACTAAAAACAAGTGCACAA 60.106 36.000 21.04 0.00 0.00 3.33
89 90 4.399618 TGCCTTACTAAAAACAAGTGCACA 59.600 37.500 21.04 0.00 0.00 4.57
90 91 4.927422 TGCCTTACTAAAAACAAGTGCAC 58.073 39.130 9.40 9.40 0.00 4.57
91 92 5.782893 ATGCCTTACTAAAAACAAGTGCA 57.217 34.783 0.00 0.00 33.28 4.57
92 93 7.275560 CCATAATGCCTTACTAAAAACAAGTGC 59.724 37.037 0.00 0.00 0.00 4.40
93 94 7.759433 CCCATAATGCCTTACTAAAAACAAGTG 59.241 37.037 0.00 0.00 0.00 3.16
94 95 7.672239 TCCCATAATGCCTTACTAAAAACAAGT 59.328 33.333 0.00 0.00 0.00 3.16
95 96 8.062065 TCCCATAATGCCTTACTAAAAACAAG 57.938 34.615 0.00 0.00 0.00 3.16
96 97 8.602472 ATCCCATAATGCCTTACTAAAAACAA 57.398 30.769 0.00 0.00 0.00 2.83
97 98 9.875708 ATATCCCATAATGCCTTACTAAAAACA 57.124 29.630 0.00 0.00 0.00 2.83
285 286 9.184523 TCGGAGTTCATTTGGATTTATGTATTT 57.815 29.630 0.00 0.00 0.00 1.40
286 287 8.746052 TCGGAGTTCATTTGGATTTATGTATT 57.254 30.769 0.00 0.00 0.00 1.89
287 288 8.210946 TCTCGGAGTTCATTTGGATTTATGTAT 58.789 33.333 4.69 0.00 0.00 2.29
288 289 7.561251 TCTCGGAGTTCATTTGGATTTATGTA 58.439 34.615 4.69 0.00 0.00 2.29
289 290 6.414732 TCTCGGAGTTCATTTGGATTTATGT 58.585 36.000 4.69 0.00 0.00 2.29
290 291 6.925610 TCTCGGAGTTCATTTGGATTTATG 57.074 37.500 4.69 0.00 0.00 1.90
291 292 7.775093 TGAATCTCGGAGTTCATTTGGATTTAT 59.225 33.333 14.72 0.00 29.93 1.40
292 293 7.109501 TGAATCTCGGAGTTCATTTGGATTTA 58.890 34.615 14.72 0.00 29.93 1.40
293 294 5.945784 TGAATCTCGGAGTTCATTTGGATTT 59.054 36.000 14.72 0.00 29.93 2.17
294 295 5.500234 TGAATCTCGGAGTTCATTTGGATT 58.500 37.500 14.72 2.29 29.93 3.01
295 296 5.102953 TGAATCTCGGAGTTCATTTGGAT 57.897 39.130 14.72 0.00 29.93 3.41
296 297 4.551702 TGAATCTCGGAGTTCATTTGGA 57.448 40.909 14.72 0.00 29.93 3.53
301 302 8.206867 TGATTTCTAATGAATCTCGGAGTTCAT 58.793 33.333 20.39 20.39 44.55 2.57
302 303 7.555965 TGATTTCTAATGAATCTCGGAGTTCA 58.444 34.615 18.53 18.53 38.57 3.18
303 304 8.425577 TTGATTTCTAATGAATCTCGGAGTTC 57.574 34.615 4.69 8.73 31.56 3.01
304 305 8.792830 TTTGATTTCTAATGAATCTCGGAGTT 57.207 30.769 4.69 0.00 31.56 3.01
305 306 8.792830 TTTTGATTTCTAATGAATCTCGGAGT 57.207 30.769 4.69 0.00 31.56 3.85
358 359 9.625747 AAAATGACTTTTCCAATTGTGGTAAAT 57.374 25.926 4.43 0.00 46.11 1.40
362 363 9.271828 GAATAAAATGACTTTTCCAATTGTGGT 57.728 29.630 4.43 0.00 46.11 4.16
369 370 8.576442 GGAGTGAGAATAAAATGACTTTTCCAA 58.424 33.333 0.00 0.00 36.09 3.53
370 371 7.723616 TGGAGTGAGAATAAAATGACTTTTCCA 59.276 33.333 0.00 0.00 36.09 3.53
371 372 8.110860 TGGAGTGAGAATAAAATGACTTTTCC 57.889 34.615 0.00 0.00 36.09 3.13
385 386 9.865321 CAACATTCAAATAAATGGAGTGAGAAT 57.135 29.630 2.11 0.00 40.28 2.40
386 387 8.859090 ACAACATTCAAATAAATGGAGTGAGAA 58.141 29.630 2.11 0.00 40.28 2.87
387 388 8.408043 ACAACATTCAAATAAATGGAGTGAGA 57.592 30.769 2.11 0.00 40.28 3.27
388 389 9.480053 AAACAACATTCAAATAAATGGAGTGAG 57.520 29.630 2.11 0.00 40.28 3.51
389 390 9.474920 GAAACAACATTCAAATAAATGGAGTGA 57.525 29.630 2.11 0.00 40.28 3.41
390 391 9.258826 TGAAACAACATTCAAATAAATGGAGTG 57.741 29.630 2.11 0.00 40.28 3.51
391 392 9.829507 TTGAAACAACATTCAAATAAATGGAGT 57.170 25.926 0.30 0.00 44.11 3.85
424 425 9.859427 GATGTCATTTCATTTGGTATCTTTTGA 57.141 29.630 0.00 0.00 0.00 2.69
425 426 9.090692 GGATGTCATTTCATTTGGTATCTTTTG 57.909 33.333 0.00 0.00 0.00 2.44
426 427 8.814931 TGGATGTCATTTCATTTGGTATCTTTT 58.185 29.630 0.00 0.00 0.00 2.27
427 428 8.365060 TGGATGTCATTTCATTTGGTATCTTT 57.635 30.769 0.00 0.00 0.00 2.52
428 429 7.959658 TGGATGTCATTTCATTTGGTATCTT 57.040 32.000 0.00 0.00 0.00 2.40
429 430 8.543293 AATGGATGTCATTTCATTTGGTATCT 57.457 30.769 8.61 0.00 43.04 1.98
449 450 9.859152 AGGGTTTATTCAAAATTTCAAAATGGA 57.141 25.926 0.00 0.00 0.00 3.41
455 456 9.114952 GGTTGAAGGGTTTATTCAAAATTTCAA 57.885 29.630 2.92 0.00 45.48 2.69
456 457 8.267894 TGGTTGAAGGGTTTATTCAAAATTTCA 58.732 29.630 2.92 0.00 45.48 2.69
457 458 8.669946 TGGTTGAAGGGTTTATTCAAAATTTC 57.330 30.769 2.92 0.00 45.48 2.17
458 459 9.119418 CTTGGTTGAAGGGTTTATTCAAAATTT 57.881 29.630 2.92 0.00 45.48 1.82
459 460 8.490311 TCTTGGTTGAAGGGTTTATTCAAAATT 58.510 29.630 2.92 0.00 45.48 1.82
460 461 8.028652 TCTTGGTTGAAGGGTTTATTCAAAAT 57.971 30.769 2.92 0.00 45.48 1.82
461 462 7.425224 TCTTGGTTGAAGGGTTTATTCAAAA 57.575 32.000 2.92 0.00 45.48 2.44
462 463 7.610580 ATCTTGGTTGAAGGGTTTATTCAAA 57.389 32.000 2.92 0.00 45.48 2.69
463 464 7.610580 AATCTTGGTTGAAGGGTTTATTCAA 57.389 32.000 0.00 0.00 42.73 2.69
464 465 7.610580 AAATCTTGGTTGAAGGGTTTATTCA 57.389 32.000 0.00 0.00 34.93 2.57
465 466 8.902540 AAAAATCTTGGTTGAAGGGTTTATTC 57.097 30.769 0.00 0.00 31.85 1.75
779 780 3.297620 CTGCTTGTGTGCACCCCC 61.298 66.667 15.69 2.66 38.12 5.40
780 781 1.604593 ATCTGCTTGTGTGCACCCC 60.605 57.895 15.69 5.46 38.12 4.95
781 782 0.890542 TCATCTGCTTGTGTGCACCC 60.891 55.000 15.69 2.52 38.12 4.61
782 783 1.131883 GATCATCTGCTTGTGTGCACC 59.868 52.381 15.69 6.37 38.12 5.01
783 784 1.808343 TGATCATCTGCTTGTGTGCAC 59.192 47.619 10.75 10.75 38.12 4.57
784 785 2.188062 TGATCATCTGCTTGTGTGCA 57.812 45.000 0.00 0.00 41.05 4.57
785 786 4.888038 TTATGATCATCTGCTTGTGTGC 57.112 40.909 12.53 0.00 0.00 4.57
786 787 5.763698 AGGATTATGATCATCTGCTTGTGTG 59.236 40.000 12.53 0.00 33.77 3.82
787 788 5.938279 AGGATTATGATCATCTGCTTGTGT 58.062 37.500 12.53 0.00 33.77 3.72
788 789 6.879276 AAGGATTATGATCATCTGCTTGTG 57.121 37.500 12.53 0.00 33.77 3.33
789 790 8.844244 GTTAAAGGATTATGATCATCTGCTTGT 58.156 33.333 12.53 10.45 33.77 3.16
790 791 8.843262 TGTTAAAGGATTATGATCATCTGCTTG 58.157 33.333 12.53 0.00 33.77 4.01
791 792 8.985315 TGTTAAAGGATTATGATCATCTGCTT 57.015 30.769 12.53 14.19 33.77 3.91
792 793 9.228949 GATGTTAAAGGATTATGATCATCTGCT 57.771 33.333 12.53 8.82 33.77 4.24
793 794 8.173775 CGATGTTAAAGGATTATGATCATCTGC 58.826 37.037 12.53 6.54 33.77 4.26
794 795 8.173775 GCGATGTTAAAGGATTATGATCATCTG 58.826 37.037 12.53 0.00 33.77 2.90
795 796 8.099537 AGCGATGTTAAAGGATTATGATCATCT 58.900 33.333 12.53 0.00 33.77 2.90
796 797 8.261492 AGCGATGTTAAAGGATTATGATCATC 57.739 34.615 12.53 0.00 33.77 2.92
797 798 8.627208 AAGCGATGTTAAAGGATTATGATCAT 57.373 30.769 13.81 13.81 33.77 2.45
798 799 7.714813 TGAAGCGATGTTAAAGGATTATGATCA 59.285 33.333 0.00 0.00 33.77 2.92
799 800 8.087982 TGAAGCGATGTTAAAGGATTATGATC 57.912 34.615 0.00 0.00 0.00 2.92
800 801 8.627208 ATGAAGCGATGTTAAAGGATTATGAT 57.373 30.769 0.00 0.00 0.00 2.45
801 802 7.714813 TGATGAAGCGATGTTAAAGGATTATGA 59.285 33.333 0.00 0.00 0.00 2.15
802 803 7.864686 TGATGAAGCGATGTTAAAGGATTATG 58.135 34.615 0.00 0.00 0.00 1.90
803 804 8.450578 TTGATGAAGCGATGTTAAAGGATTAT 57.549 30.769 0.00 0.00 0.00 1.28
804 805 7.857734 TTGATGAAGCGATGTTAAAGGATTA 57.142 32.000 0.00 0.00 0.00 1.75
805 806 6.757897 TTGATGAAGCGATGTTAAAGGATT 57.242 33.333 0.00 0.00 0.00 3.01
806 807 6.949352 ATTGATGAAGCGATGTTAAAGGAT 57.051 33.333 0.00 0.00 0.00 3.24
807 808 9.208022 CTATATTGATGAAGCGATGTTAAAGGA 57.792 33.333 0.00 0.00 0.00 3.36
808 809 9.208022 TCTATATTGATGAAGCGATGTTAAAGG 57.792 33.333 0.00 0.00 0.00 3.11
811 812 9.541143 TGTTCTATATTGATGAAGCGATGTTAA 57.459 29.630 0.00 0.00 0.00 2.01
812 813 8.978539 GTGTTCTATATTGATGAAGCGATGTTA 58.021 33.333 0.00 0.00 0.00 2.41
813 814 7.041780 GGTGTTCTATATTGATGAAGCGATGTT 60.042 37.037 0.00 0.00 0.00 2.71
814 815 6.425114 GGTGTTCTATATTGATGAAGCGATGT 59.575 38.462 0.00 0.00 0.00 3.06
815 816 6.128445 GGGTGTTCTATATTGATGAAGCGATG 60.128 42.308 0.00 0.00 0.00 3.84
816 817 5.934625 GGGTGTTCTATATTGATGAAGCGAT 59.065 40.000 0.00 0.00 0.00 4.58
817 818 5.163353 TGGGTGTTCTATATTGATGAAGCGA 60.163 40.000 0.00 0.00 0.00 4.93
818 819 5.056480 TGGGTGTTCTATATTGATGAAGCG 58.944 41.667 0.00 0.00 0.00 4.68
819 820 6.942532 TTGGGTGTTCTATATTGATGAAGC 57.057 37.500 0.00 0.00 0.00 3.86
1134 1156 8.441608 CGGATAAGCTCAAGATCATTCTTTATG 58.558 37.037 0.00 0.00 40.28 1.90
1197 1219 5.344743 TCCATGTTTCAGTGACTAGATCC 57.655 43.478 0.00 0.00 0.00 3.36
1331 1368 4.015872 TCAAGTGTAAATGGGTCCTGAC 57.984 45.455 0.00 0.00 0.00 3.51
1341 1378 5.124457 AGCAGCGATTTCATCAAGTGTAAAT 59.876 36.000 0.00 0.00 0.00 1.40
1432 1475 0.107459 GGAACATCACTCCCTCCAGC 60.107 60.000 0.00 0.00 0.00 4.85
1433 1476 1.209019 CAGGAACATCACTCCCTCCAG 59.791 57.143 0.00 0.00 32.95 3.86
1434 1477 1.279496 CAGGAACATCACTCCCTCCA 58.721 55.000 0.00 0.00 32.95 3.86
1466 1512 5.467035 AAGATACATTTGTTGTTGGGTGG 57.533 39.130 0.00 0.00 39.87 4.61
1785 1832 2.165380 CAACTCTGCACCGGTCATG 58.835 57.895 2.59 0.00 0.00 3.07
1848 1913 5.068636 GCTGTCCAGACATCATCCAATATT 58.931 41.667 0.04 0.00 41.01 1.28
2064 2129 5.221843 ACACTCTTCTAACACTAATGGGCAA 60.222 40.000 0.00 0.00 0.00 4.52
2080 7243 5.749109 CCACTATCGATTTACCACACTCTTC 59.251 44.000 1.71 0.00 0.00 2.87
2370 7533 7.009540 GCTCCAATTTGTTCAATAAATCCTTCG 59.990 37.037 0.00 0.00 0.00 3.79
2426 7589 0.605589 TCGAACGAGCTCTGTCAGGA 60.606 55.000 12.85 7.07 0.00 3.86
2543 7708 2.095692 GTCGTACCGAAACTCTCTCTCC 59.904 54.545 0.00 0.00 37.72 3.71
2693 7864 4.094887 ACAATGAAGACGATGCCATGTTAC 59.905 41.667 0.00 0.00 0.00 2.50
2696 7867 2.715046 ACAATGAAGACGATGCCATGT 58.285 42.857 0.00 0.00 0.00 3.21
2755 7926 6.205658 GGAATTGTCTCAATAGGTAATCCTGC 59.794 42.308 0.00 0.00 44.81 4.85
2775 7946 2.833943 GTCCCCAGCTGAATTTGGAATT 59.166 45.455 17.39 0.00 36.55 2.17
2789 7960 4.227527 ACCTAAGGTTGAATAAGTCCCCAG 59.772 45.833 0.00 0.00 27.29 4.45
2796 7967 6.040504 GGCCCAAATACCTAAGGTTGAATAAG 59.959 42.308 0.00 0.00 37.09 1.73
2904 8075 1.039068 CTCGAGGGAGATGCAGACAT 58.961 55.000 3.91 0.00 43.27 3.06
2996 8167 5.632034 AGGTTCCATAGGTCCAATACTTC 57.368 43.478 0.00 0.00 0.00 3.01
3005 8176 3.265995 TCCCTCAAAAGGTTCCATAGGTC 59.734 47.826 0.00 0.00 41.59 3.85
3061 8232 4.261197 GGAAACTTCACTAGCACAAACTGG 60.261 45.833 0.00 0.00 0.00 4.00
3083 8254 7.305474 AGATAAATTTGCTAGTTTTGTGACGG 58.695 34.615 0.00 0.00 0.00 4.79
3112 8283 5.399727 CCCCAATAATGCTAAGGGTCCTTAA 60.400 44.000 10.32 0.00 37.97 1.85
3114 8285 3.117131 CCCCAATAATGCTAAGGGTCCTT 60.117 47.826 7.47 7.47 37.84 3.36
3167 8338 4.779987 CTGGTGCATCATTGATAACGATG 58.220 43.478 0.00 0.00 39.62 3.84
3168 8339 3.251729 GCTGGTGCATCATTGATAACGAT 59.748 43.478 0.00 0.00 39.41 3.73
3171 8342 3.881688 AGAGCTGGTGCATCATTGATAAC 59.118 43.478 0.00 1.40 42.74 1.89
3179 8350 1.560505 TAGTGAGAGCTGGTGCATCA 58.439 50.000 0.00 0.00 42.74 3.07
3246 8417 4.864704 AAGGCGGTTTGACAATGTTAAT 57.135 36.364 0.00 0.00 0.00 1.40
3291 8462 4.846779 TTCCAATGTTCCTTCGGAAAAG 57.153 40.909 0.00 0.00 43.86 2.27
3310 8481 5.858581 CGTTGGTTGAGAAAAATGGAGATTC 59.141 40.000 0.00 0.00 0.00 2.52
3380 8551 0.392461 GAGGCGCTGTAATGGGTTCA 60.392 55.000 7.64 0.00 0.00 3.18
3462 8633 1.923356 GGAACCCCTCTGCATCAAAA 58.077 50.000 0.00 0.00 0.00 2.44
3499 8670 5.993441 TCACATCTGGCATATCATACAACTG 59.007 40.000 0.00 0.00 0.00 3.16
3500 8671 6.178607 TCACATCTGGCATATCATACAACT 57.821 37.500 0.00 0.00 0.00 3.16
3501 8672 6.293626 GGTTCACATCTGGCATATCATACAAC 60.294 42.308 0.00 0.00 0.00 3.32
3511 8682 4.202182 GCATATTTGGTTCACATCTGGCAT 60.202 41.667 0.00 0.00 0.00 4.40
3517 8688 5.909054 CGTGTATGCATATTTGGTTCACATC 59.091 40.000 10.16 0.00 0.00 3.06
3555 8726 4.133820 TGATCAAAAGTTCTTCAAGGCGA 58.866 39.130 0.00 0.00 0.00 5.54
3571 8742 2.552315 GTTCGGCAAGGTTTCTGATCAA 59.448 45.455 0.00 0.00 0.00 2.57
3661 8843 6.403200 GCCGCTTCAAGATTACTTATGAAACA 60.403 38.462 0.00 0.00 34.70 2.83
3672 8854 1.555075 AGTCTGGCCGCTTCAAGATTA 59.445 47.619 0.00 0.00 0.00 1.75
3687 8869 6.831353 AGGTTATCGGGATATGATCTAGTCTG 59.169 42.308 0.00 0.00 0.00 3.51
3735 8917 6.294176 GCATAATAAGTTGGCTAGGATGGTTG 60.294 42.308 0.00 0.00 0.00 3.77
3752 8941 6.585416 TGCATGAAGAGTGAGAGCATAATAA 58.415 36.000 0.00 0.00 0.00 1.40
3760 8949 4.201832 GCTGAATTGCATGAAGAGTGAGAG 60.202 45.833 0.00 0.00 0.00 3.20
3763 8952 2.417586 CGCTGAATTGCATGAAGAGTGA 59.582 45.455 0.00 0.00 0.00 3.41
3768 8958 2.247637 CACACGCTGAATTGCATGAAG 58.752 47.619 0.00 0.00 30.15 3.02
3783 8973 4.498520 AGGCCGATCGAGCACACG 62.499 66.667 18.66 0.00 0.00 4.49
3796 8990 0.457443 GCTAGAATTTGGTGCAGGCC 59.543 55.000 0.00 0.00 0.00 5.19
3797 8991 1.467920 AGCTAGAATTTGGTGCAGGC 58.532 50.000 0.00 0.00 0.00 4.85
3821 9015 6.092533 GCAACAAATGGGGATTTTATCAACTG 59.907 38.462 0.00 0.00 0.00 3.16
3829 9023 2.372837 AGCTGCAACAAATGGGGATTTT 59.627 40.909 1.02 0.00 0.00 1.82
3834 9028 0.245539 CAGAGCTGCAACAAATGGGG 59.754 55.000 1.02 0.00 0.00 4.96
3838 9032 1.884579 CACTCCAGAGCTGCAACAAAT 59.115 47.619 1.02 0.00 0.00 2.32
3840 9034 0.535780 CCACTCCAGAGCTGCAACAA 60.536 55.000 1.02 0.00 0.00 2.83
3849 9043 4.536316 GCTCATGCCACTCCAGAG 57.464 61.111 0.00 0.00 0.00 3.35
3890 9084 4.929808 GTCACTGACCGATTACAATGACTT 59.070 41.667 0.00 0.00 39.23 3.01
3910 9104 2.359850 GATGGGCGGCAGTTGTCA 60.360 61.111 12.47 0.00 0.00 3.58
3913 9107 2.879907 CAAGATGGGCGGCAGTTG 59.120 61.111 12.47 4.38 0.00 3.16
3914 9108 3.064324 GCAAGATGGGCGGCAGTT 61.064 61.111 12.47 0.00 0.00 3.16
3915 9109 4.039092 AGCAAGATGGGCGGCAGT 62.039 61.111 12.47 0.00 36.08 4.40
3916 9110 3.515286 CAGCAAGATGGGCGGCAG 61.515 66.667 12.47 0.00 36.08 4.85
3917 9111 2.476852 TAACAGCAAGATGGGCGGCA 62.477 55.000 12.47 0.00 36.08 5.69
3918 9112 1.103398 ATAACAGCAAGATGGGCGGC 61.103 55.000 0.00 0.00 36.08 6.53
3919 9113 0.947244 GATAACAGCAAGATGGGCGG 59.053 55.000 0.00 0.00 36.08 6.13
3920 9114 1.959042 AGATAACAGCAAGATGGGCG 58.041 50.000 0.00 0.00 36.08 6.13
3921 9115 4.400567 AGAAAAGATAACAGCAAGATGGGC 59.599 41.667 0.00 0.00 0.00 5.36
3922 9116 5.678107 GCAGAAAAGATAACAGCAAGATGGG 60.678 44.000 0.00 0.00 0.00 4.00
3923 9117 5.125097 AGCAGAAAAGATAACAGCAAGATGG 59.875 40.000 0.00 0.00 0.00 3.51
3924 9118 6.192234 AGCAGAAAAGATAACAGCAAGATG 57.808 37.500 0.00 0.00 0.00 2.90
3925 9119 6.830873 AAGCAGAAAAGATAACAGCAAGAT 57.169 33.333 0.00 0.00 0.00 2.40
3939 9176 8.868916 GTTGTTCTTGTTTGAATAAGCAGAAAA 58.131 29.630 0.00 0.00 29.96 2.29
3983 9227 4.581824 TGGCTGCAATAGAAATCATTCCTC 59.418 41.667 0.50 0.00 36.12 3.71
3984 9228 4.539726 TGGCTGCAATAGAAATCATTCCT 58.460 39.130 0.50 0.00 36.12 3.36
4011 9255 6.699575 AGCATAAATACTGTAAAGCCAAGG 57.300 37.500 0.00 0.00 0.00 3.61
4016 9260 9.869844 CATCACTAAGCATAAATACTGTAAAGC 57.130 33.333 0.00 0.00 0.00 3.51
4017 9261 9.869844 GCATCACTAAGCATAAATACTGTAAAG 57.130 33.333 0.00 0.00 0.00 1.85
4125 9370 8.695456 AGGATTGTTTTCTCTTAAACATGTGTT 58.305 29.630 0.00 0.00 44.76 3.32
4182 9437 7.115947 GGATGAGCAAAAAGTTCAGATTTCTTG 59.884 37.037 0.00 0.00 40.95 3.02
4185 9440 6.685657 AGGATGAGCAAAAAGTTCAGATTTC 58.314 36.000 0.00 0.00 40.95 2.17
4186 9441 6.492772 AGAGGATGAGCAAAAAGTTCAGATTT 59.507 34.615 0.00 0.00 40.95 2.17
4187 9442 6.008960 AGAGGATGAGCAAAAAGTTCAGATT 58.991 36.000 0.00 0.00 40.95 2.40
4208 9463 0.676151 GAACTTCAGCAGCCCCAGAG 60.676 60.000 0.00 0.00 0.00 3.35
4223 9478 7.396540 AAACTGAAATGTGAAGTTCTGAACT 57.603 32.000 17.00 17.00 45.46 3.01
4239 9494 4.202010 GCCAAGAGCTACACAAAACTGAAA 60.202 41.667 0.00 0.00 38.99 2.69
4248 9503 1.679311 CCAGGCCAAGAGCTACACA 59.321 57.895 5.01 0.00 43.05 3.72
4249 9504 1.078143 CCCAGGCCAAGAGCTACAC 60.078 63.158 5.01 0.00 43.05 2.90
4251 9506 0.328258 TTTCCCAGGCCAAGAGCTAC 59.672 55.000 5.01 0.00 43.05 3.58
4329 9740 0.816373 TGCAACAGCAGTTCAGCAAA 59.184 45.000 4.78 0.00 34.79 3.68
4330 9741 2.491291 TGCAACAGCAGTTCAGCAA 58.509 47.368 4.78 0.00 34.79 3.91
4331 9742 4.239162 TGCAACAGCAGTTCAGCA 57.761 50.000 3.32 3.32 35.18 4.41
4340 9751 1.661480 TGCACCAATCTGCAACAGC 59.339 52.632 0.00 0.00 44.28 4.40
4349 9760 4.829064 TCTAAAACACAGTGCACCAATC 57.171 40.909 14.63 0.00 0.00 2.67
4365 9776 4.917385 ACACCAGTACATGCCATTCTAAA 58.083 39.130 0.00 0.00 0.00 1.85
4374 9785 7.279981 TGAAACATATCTAACACCAGTACATGC 59.720 37.037 0.00 0.00 0.00 4.06
4394 9812 9.051679 TCTTTTCTTTCTCGTATGAATGAAACA 57.948 29.630 18.50 11.63 43.37 2.83
4406 9824 6.371825 ACTTTCAACTGTCTTTTCTTTCTCGT 59.628 34.615 0.00 0.00 0.00 4.18
4407 9825 6.684555 CACTTTCAACTGTCTTTTCTTTCTCG 59.315 38.462 0.00 0.00 0.00 4.04
4444 9874 0.615827 TAAGCAGCTGCCTCCTCTGA 60.616 55.000 34.39 5.62 43.38 3.27
4453 9883 3.129988 AGGTTTCAATGATAAGCAGCTGC 59.870 43.478 31.53 31.53 42.49 5.25
4455 9885 4.338879 ACAGGTTTCAATGATAAGCAGCT 58.661 39.130 0.00 0.00 0.00 4.24
4468 9898 5.362430 AGCCAACTGATAAAAACAGGTTTCA 59.638 36.000 0.00 0.00 39.38 2.69
4473 9903 7.339466 ACCTTATAGCCAACTGATAAAAACAGG 59.661 37.037 0.00 0.00 39.38 4.00
4476 9906 8.276252 TGACCTTATAGCCAACTGATAAAAAC 57.724 34.615 0.00 0.00 0.00 2.43
4482 9912 7.147302 ACCTAAATGACCTTATAGCCAACTGAT 60.147 37.037 0.00 0.00 0.00 2.90
4483 9913 6.157994 ACCTAAATGACCTTATAGCCAACTGA 59.842 38.462 0.00 0.00 0.00 3.41
4484 9914 6.357367 ACCTAAATGACCTTATAGCCAACTG 58.643 40.000 0.00 0.00 0.00 3.16
4485 9915 6.576778 ACCTAAATGACCTTATAGCCAACT 57.423 37.500 0.00 0.00 0.00 3.16
4486 9916 7.506971 AGTACCTAAATGACCTTATAGCCAAC 58.493 38.462 0.00 0.00 0.00 3.77
4487 9917 7.685849 AGTACCTAAATGACCTTATAGCCAA 57.314 36.000 0.00 0.00 0.00 4.52
4488 9918 7.685849 AAGTACCTAAATGACCTTATAGCCA 57.314 36.000 0.00 0.00 0.00 4.75
4489 9919 9.086758 TCTAAGTACCTAAATGACCTTATAGCC 57.913 37.037 0.00 0.00 0.00 3.93
4494 9924 8.989131 AGCATTCTAAGTACCTAAATGACCTTA 58.011 33.333 10.39 0.00 30.64 2.69
4495 9925 7.862675 AGCATTCTAAGTACCTAAATGACCTT 58.137 34.615 10.39 0.00 30.64 3.50
4496 9926 7.439108 AGCATTCTAAGTACCTAAATGACCT 57.561 36.000 10.39 0.13 30.64 3.85
4497 9927 9.780186 ATTAGCATTCTAAGTACCTAAATGACC 57.220 33.333 10.39 0.00 38.11 4.02
4547 9977 0.320374 CCCAGTACGGCTCTGTGAAA 59.680 55.000 0.00 0.00 0.00 2.69
4557 9987 1.048601 ATATGTGAGGCCCAGTACGG 58.951 55.000 0.00 0.00 0.00 4.02
4559 9989 1.417890 AGCATATGTGAGGCCCAGTAC 59.582 52.381 0.00 0.00 34.56 2.73
4565 9995 2.836981 AGGATCTAGCATATGTGAGGCC 59.163 50.000 4.29 0.00 34.56 5.19
4571 10001 5.401750 ACTCTTCCAGGATCTAGCATATGT 58.598 41.667 4.29 0.00 0.00 2.29
4587 10019 7.046033 TGATCGAATAAAAGGGTAACTCTTCC 58.954 38.462 0.00 0.00 0.00 3.46
4606 10038 2.358957 CAATGCCTTTCACCTGATCGA 58.641 47.619 0.00 0.00 0.00 3.59
4607 10039 1.202222 GCAATGCCTTTCACCTGATCG 60.202 52.381 0.00 0.00 0.00 3.69
4608 10040 1.820519 TGCAATGCCTTTCACCTGATC 59.179 47.619 1.53 0.00 0.00 2.92
4609 10041 1.927487 TGCAATGCCTTTCACCTGAT 58.073 45.000 1.53 0.00 0.00 2.90
4618 10052 3.505680 TCGAACAACTATTGCAATGCCTT 59.494 39.130 22.27 7.16 0.00 4.35
4621 10055 4.266029 CCATTCGAACAACTATTGCAATGC 59.734 41.667 22.27 0.00 0.00 3.56
4630 10064 4.525487 ACCACTAGACCATTCGAACAACTA 59.475 41.667 0.00 1.81 0.00 2.24
4631 10065 3.323979 ACCACTAGACCATTCGAACAACT 59.676 43.478 0.00 0.60 0.00 3.16
4632 10066 3.660865 ACCACTAGACCATTCGAACAAC 58.339 45.455 0.00 0.00 0.00 3.32
4633 10067 4.062293 CAACCACTAGACCATTCGAACAA 58.938 43.478 0.00 0.00 0.00 2.83
4634 10068 3.556213 CCAACCACTAGACCATTCGAACA 60.556 47.826 0.00 0.00 0.00 3.18
4635 10069 3.000727 CCAACCACTAGACCATTCGAAC 58.999 50.000 0.00 0.00 0.00 3.95
4636 10070 2.614481 GCCAACCACTAGACCATTCGAA 60.614 50.000 0.00 0.00 0.00 3.71
4637 10071 1.066430 GCCAACCACTAGACCATTCGA 60.066 52.381 0.00 0.00 0.00 3.71
4638 10072 1.066143 AGCCAACCACTAGACCATTCG 60.066 52.381 0.00 0.00 0.00 3.34
4639 10073 2.749621 CAAGCCAACCACTAGACCATTC 59.250 50.000 0.00 0.00 0.00 2.67
4640 10074 2.795329 CAAGCCAACCACTAGACCATT 58.205 47.619 0.00 0.00 0.00 3.16
4641 10075 1.614317 GCAAGCCAACCACTAGACCAT 60.614 52.381 0.00 0.00 0.00 3.55
4642 10076 0.250727 GCAAGCCAACCACTAGACCA 60.251 55.000 0.00 0.00 0.00 4.02
4643 10077 0.250727 TGCAAGCCAACCACTAGACC 60.251 55.000 0.00 0.00 0.00 3.85
4644 10078 1.604604 TTGCAAGCCAACCACTAGAC 58.395 50.000 0.00 0.00 0.00 2.59
4645 10079 2.161855 CATTGCAAGCCAACCACTAGA 58.838 47.619 4.94 0.00 35.99 2.43
4646 10080 1.203052 CCATTGCAAGCCAACCACTAG 59.797 52.381 4.94 0.00 35.99 2.57
4647 10081 1.255882 CCATTGCAAGCCAACCACTA 58.744 50.000 4.94 0.00 35.99 2.74
4648 10082 2.051941 CCATTGCAAGCCAACCACT 58.948 52.632 4.94 0.00 35.99 4.00
4649 10083 1.668793 GCCATTGCAAGCCAACCAC 60.669 57.895 4.94 0.00 35.99 4.16
4650 10084 2.742403 GCCATTGCAAGCCAACCA 59.258 55.556 4.94 0.00 35.99 3.67
4651 10085 2.432972 CGCCATTGCAAGCCAACC 60.433 61.111 4.94 0.00 35.99 3.77
4652 10086 3.113979 GCGCCATTGCAAGCCAAC 61.114 61.111 4.94 0.00 35.99 3.77
4653 10087 3.613689 TGCGCCATTGCAAGCCAA 61.614 55.556 4.18 0.00 43.02 4.52
4660 10094 1.593196 TAGTAAGGATGCGCCATTGC 58.407 50.000 4.18 0.00 40.02 3.56
4661 10095 2.290641 GGTTAGTAAGGATGCGCCATTG 59.709 50.000 4.18 0.00 40.02 2.82
4662 10096 2.092646 TGGTTAGTAAGGATGCGCCATT 60.093 45.455 4.18 0.00 40.02 3.16
4663 10097 1.488812 TGGTTAGTAAGGATGCGCCAT 59.511 47.619 4.18 0.00 40.02 4.40
4664 10098 0.906066 TGGTTAGTAAGGATGCGCCA 59.094 50.000 4.18 0.00 40.02 5.69
4665 10099 1.583054 CTGGTTAGTAAGGATGCGCC 58.417 55.000 4.18 0.00 0.00 6.53
4666 10100 1.583054 CCTGGTTAGTAAGGATGCGC 58.417 55.000 0.00 0.00 35.40 6.09
4667 10101 1.485066 ACCCTGGTTAGTAAGGATGCG 59.515 52.381 0.00 0.00 35.40 4.73
4668 10102 3.710165 ACTACCCTGGTTAGTAAGGATGC 59.290 47.826 1.59 0.00 35.40 3.91
4669 10103 4.344390 GGACTACCCTGGTTAGTAAGGATG 59.656 50.000 3.68 0.00 35.40 3.51
4670 10104 4.554683 GGACTACCCTGGTTAGTAAGGAT 58.445 47.826 3.68 0.00 35.40 3.24
4671 10105 3.625716 CGGACTACCCTGGTTAGTAAGGA 60.626 52.174 3.68 0.00 35.40 3.36
4672 10106 2.692041 CGGACTACCCTGGTTAGTAAGG 59.308 54.545 3.68 0.00 0.00 2.69
4673 10107 3.624777 TCGGACTACCCTGGTTAGTAAG 58.375 50.000 3.68 2.11 0.00 2.34
4674 10108 3.737559 TCGGACTACCCTGGTTAGTAA 57.262 47.619 3.68 0.00 0.00 2.24
4675 10109 3.737559 TTCGGACTACCCTGGTTAGTA 57.262 47.619 3.68 0.00 0.00 1.82
4676 10110 2.610438 TTCGGACTACCCTGGTTAGT 57.390 50.000 3.29 3.29 0.00 2.24
4677 10111 2.364647 GGATTCGGACTACCCTGGTTAG 59.635 54.545 0.00 0.00 0.00 2.34
4678 10112 2.023695 AGGATTCGGACTACCCTGGTTA 60.024 50.000 0.00 0.00 0.00 2.85
4679 10113 1.201424 GGATTCGGACTACCCTGGTT 58.799 55.000 0.00 0.00 0.00 3.67
4680 10114 0.338814 AGGATTCGGACTACCCTGGT 59.661 55.000 0.00 0.00 0.00 4.00
4681 10115 2.376695 TAGGATTCGGACTACCCTGG 57.623 55.000 0.00 0.00 0.00 4.45
4682 10116 3.497332 TGATAGGATTCGGACTACCCTG 58.503 50.000 0.00 0.00 0.00 4.45
4683 10117 3.897657 TGATAGGATTCGGACTACCCT 57.102 47.619 0.00 0.00 0.00 4.34
4684 10118 4.087182 TCATGATAGGATTCGGACTACCC 58.913 47.826 0.00 0.00 0.00 3.69
4685 10119 4.381079 GCTCATGATAGGATTCGGACTACC 60.381 50.000 0.00 0.00 0.00 3.18
4686 10120 4.673061 CGCTCATGATAGGATTCGGACTAC 60.673 50.000 0.00 0.00 0.00 2.73
4687 10121 3.440522 CGCTCATGATAGGATTCGGACTA 59.559 47.826 0.00 0.00 0.00 2.59
4688 10122 2.230025 CGCTCATGATAGGATTCGGACT 59.770 50.000 0.00 0.00 0.00 3.85
4689 10123 2.600731 CGCTCATGATAGGATTCGGAC 58.399 52.381 0.00 0.00 0.00 4.79
4690 10124 1.546029 CCGCTCATGATAGGATTCGGA 59.454 52.381 10.20 0.00 38.02 4.55
4691 10125 1.404717 CCCGCTCATGATAGGATTCGG 60.405 57.143 15.78 10.49 35.80 4.30
4692 10126 1.273606 ACCCGCTCATGATAGGATTCG 59.726 52.381 15.78 4.31 0.00 3.34
4693 10127 3.118956 CCTACCCGCTCATGATAGGATTC 60.119 52.174 12.27 0.00 35.38 2.52
4694 10128 2.834549 CCTACCCGCTCATGATAGGATT 59.165 50.000 12.27 5.18 35.38 3.01
4695 10129 2.043115 TCCTACCCGCTCATGATAGGAT 59.957 50.000 15.21 3.76 37.17 3.24
4696 10130 1.427753 TCCTACCCGCTCATGATAGGA 59.572 52.381 15.21 15.21 39.26 2.94
4697 10131 1.924731 TCCTACCCGCTCATGATAGG 58.075 55.000 11.62 11.62 34.80 2.57
4698 10132 3.360867 AGATCCTACCCGCTCATGATAG 58.639 50.000 0.00 0.00 0.00 2.08
4699 10133 3.458044 AGATCCTACCCGCTCATGATA 57.542 47.619 0.00 0.00 0.00 2.15
4700 10134 2.317371 AGATCCTACCCGCTCATGAT 57.683 50.000 0.00 0.00 0.00 2.45
4701 10135 2.971901 TAGATCCTACCCGCTCATGA 57.028 50.000 0.00 0.00 0.00 3.07
4702 10136 3.360867 AGATAGATCCTACCCGCTCATG 58.639 50.000 0.00 0.00 0.00 3.07
4703 10137 3.748645 AGATAGATCCTACCCGCTCAT 57.251 47.619 0.00 0.00 0.00 2.90
4704 10138 3.527507 AAGATAGATCCTACCCGCTCA 57.472 47.619 0.00 0.00 0.00 4.26
4705 10139 6.532988 AAATAAGATAGATCCTACCCGCTC 57.467 41.667 0.00 0.00 0.00 5.03
4706 10140 8.431910 TTTAAATAAGATAGATCCTACCCGCT 57.568 34.615 0.00 0.00 0.00 5.52
4707 10141 9.668497 AATTTAAATAAGATAGATCCTACCCGC 57.332 33.333 0.01 0.00 0.00 6.13
4716 10150 9.878599 CGCCGTTTGAATTTAAATAAGATAGAT 57.121 29.630 0.01 0.00 0.00 1.98
4717 10151 7.853929 GCGCCGTTTGAATTTAAATAAGATAGA 59.146 33.333 0.01 0.00 0.00 1.98
4718 10152 7.855904 AGCGCCGTTTGAATTTAAATAAGATAG 59.144 33.333 2.29 0.00 0.00 2.08
4719 10153 7.699566 AGCGCCGTTTGAATTTAAATAAGATA 58.300 30.769 2.29 0.00 0.00 1.98
4720 10154 6.560711 AGCGCCGTTTGAATTTAAATAAGAT 58.439 32.000 2.29 0.00 0.00 2.40
4721 10155 5.945155 AGCGCCGTTTGAATTTAAATAAGA 58.055 33.333 2.29 0.00 0.00 2.10
4722 10156 5.229260 GGAGCGCCGTTTGAATTTAAATAAG 59.771 40.000 2.29 0.00 0.00 1.73
4723 10157 5.096849 GGAGCGCCGTTTGAATTTAAATAA 58.903 37.500 2.29 0.00 0.00 1.40
4724 10158 4.396790 AGGAGCGCCGTTTGAATTTAAATA 59.603 37.500 2.29 0.00 39.96 1.40
4725 10159 3.192633 AGGAGCGCCGTTTGAATTTAAAT 59.807 39.130 2.29 0.00 39.96 1.40
4726 10160 2.554893 AGGAGCGCCGTTTGAATTTAAA 59.445 40.909 2.29 0.00 39.96 1.52
4727 10161 2.156098 AGGAGCGCCGTTTGAATTTAA 58.844 42.857 2.29 0.00 39.96 1.52
4728 10162 1.816074 AGGAGCGCCGTTTGAATTTA 58.184 45.000 2.29 0.00 39.96 1.40
4729 10163 0.958822 AAGGAGCGCCGTTTGAATTT 59.041 45.000 2.29 0.00 39.96 1.82
4730 10164 0.521735 GAAGGAGCGCCGTTTGAATT 59.478 50.000 2.29 0.00 39.96 2.17
4731 10165 1.305930 GGAAGGAGCGCCGTTTGAAT 61.306 55.000 2.29 0.00 39.96 2.57
4732 10166 1.964373 GGAAGGAGCGCCGTTTGAA 60.964 57.895 2.29 0.00 39.96 2.69
4733 10167 2.358247 GGAAGGAGCGCCGTTTGA 60.358 61.111 2.29 0.00 39.96 2.69
4734 10168 3.788766 CGGAAGGAGCGCCGTTTG 61.789 66.667 2.29 0.00 42.49 2.93
4739 10173 3.880846 CAATGCGGAAGGAGCGCC 61.881 66.667 2.29 0.00 37.44 6.53
4740 10174 3.880846 CCAATGCGGAAGGAGCGC 61.881 66.667 0.00 0.00 36.56 5.92
4741 10175 2.125147 TCCAATGCGGAAGGAGCG 60.125 61.111 0.00 0.00 42.52 5.03
4747 10181 8.123741 TTTCATATAGAATGGTCCAATGCGGAA 61.124 37.037 0.00 0.00 40.13 4.30
4748 10182 4.285775 TCATATAGAATGGTCCAATGCGGA 59.714 41.667 0.00 0.00 43.61 5.54
4749 10183 4.578871 TCATATAGAATGGTCCAATGCGG 58.421 43.478 0.00 0.00 0.00 5.69
4750 10184 6.558771 TTTCATATAGAATGGTCCAATGCG 57.441 37.500 0.00 0.00 35.83 4.73
4751 10185 6.810182 GCATTTCATATAGAATGGTCCAATGC 59.190 38.462 0.00 0.00 34.97 3.56
4752 10186 7.888424 TGCATTTCATATAGAATGGTCCAATG 58.112 34.615 0.00 0.00 35.83 2.82
4753 10187 8.528643 CATGCATTTCATATAGAATGGTCCAAT 58.471 33.333 0.00 0.00 35.83 3.16
4754 10188 7.039574 CCATGCATTTCATATAGAATGGTCCAA 60.040 37.037 0.00 0.00 35.83 3.53
4755 10189 6.434965 CCATGCATTTCATATAGAATGGTCCA 59.565 38.462 0.00 0.00 35.83 4.02
4756 10190 6.127535 CCCATGCATTTCATATAGAATGGTCC 60.128 42.308 0.00 0.00 35.83 4.46
4757 10191 6.435277 ACCCATGCATTTCATATAGAATGGTC 59.565 38.462 0.00 0.00 35.83 4.02
4758 10192 6.209986 CACCCATGCATTTCATATAGAATGGT 59.790 38.462 0.00 0.00 35.83 3.55
4759 10193 6.209986 ACACCCATGCATTTCATATAGAATGG 59.790 38.462 0.00 0.00 35.83 3.16
4760 10194 7.040271 TCACACCCATGCATTTCATATAGAATG 60.040 37.037 0.00 6.06 35.83 2.67
4761 10195 7.005902 TCACACCCATGCATTTCATATAGAAT 58.994 34.615 0.00 0.00 35.83 2.40
4762 10196 6.363882 TCACACCCATGCATTTCATATAGAA 58.636 36.000 0.00 0.00 33.19 2.10
4763 10197 5.939447 TCACACCCATGCATTTCATATAGA 58.061 37.500 0.00 0.00 33.19 1.98
4764 10198 6.638096 TTCACACCCATGCATTTCATATAG 57.362 37.500 0.00 0.00 33.19 1.31
4765 10199 8.575589 GTTATTCACACCCATGCATTTCATATA 58.424 33.333 0.00 0.00 33.19 0.86
4766 10200 7.288389 AGTTATTCACACCCATGCATTTCATAT 59.712 33.333 0.00 0.00 33.19 1.78
4767 10201 6.606796 AGTTATTCACACCCATGCATTTCATA 59.393 34.615 0.00 0.00 33.19 2.15
4768 10202 5.422970 AGTTATTCACACCCATGCATTTCAT 59.577 36.000 0.00 0.00 35.31 2.57
4769 10203 4.771577 AGTTATTCACACCCATGCATTTCA 59.228 37.500 0.00 0.00 0.00 2.69
4770 10204 5.126061 AGAGTTATTCACACCCATGCATTTC 59.874 40.000 0.00 0.00 0.00 2.17
4771 10205 5.018809 AGAGTTATTCACACCCATGCATTT 58.981 37.500 0.00 0.00 0.00 2.32
4772 10206 4.400251 CAGAGTTATTCACACCCATGCATT 59.600 41.667 0.00 0.00 0.00 3.56
4773 10207 3.949754 CAGAGTTATTCACACCCATGCAT 59.050 43.478 0.00 0.00 0.00 3.96
4774 10208 3.008923 TCAGAGTTATTCACACCCATGCA 59.991 43.478 0.00 0.00 0.00 3.96
4775 10209 3.609853 TCAGAGTTATTCACACCCATGC 58.390 45.455 0.00 0.00 0.00 4.06
4776 10210 6.764308 ATTTCAGAGTTATTCACACCCATG 57.236 37.500 0.00 0.00 0.00 3.66
4777 10211 7.309990 CCAAATTTCAGAGTTATTCACACCCAT 60.310 37.037 0.00 0.00 0.00 4.00
4778 10212 6.015519 CCAAATTTCAGAGTTATTCACACCCA 60.016 38.462 0.00 0.00 0.00 4.51
4779 10213 6.015434 ACCAAATTTCAGAGTTATTCACACCC 60.015 38.462 0.00 0.00 0.00 4.61
4780 10214 6.981722 ACCAAATTTCAGAGTTATTCACACC 58.018 36.000 0.00 0.00 0.00 4.16
4781 10215 8.871686 AAACCAAATTTCAGAGTTATTCACAC 57.128 30.769 0.00 0.00 0.00 3.82
4782 10216 9.959749 GTAAACCAAATTTCAGAGTTATTCACA 57.040 29.630 0.00 0.00 0.00 3.58
4783 10217 9.959749 TGTAAACCAAATTTCAGAGTTATTCAC 57.040 29.630 0.00 0.00 0.00 3.18
4787 10221 9.927668 CCAATGTAAACCAAATTTCAGAGTTAT 57.072 29.630 0.00 0.00 0.00 1.89
4788 10222 9.137459 TCCAATGTAAACCAAATTTCAGAGTTA 57.863 29.630 0.00 0.00 0.00 2.24
4789 10223 8.017418 TCCAATGTAAACCAAATTTCAGAGTT 57.983 30.769 0.00 0.00 0.00 3.01
4790 10224 7.595819 TCCAATGTAAACCAAATTTCAGAGT 57.404 32.000 0.00 0.00 0.00 3.24
4791 10225 8.764287 GTTTCCAATGTAAACCAAATTTCAGAG 58.236 33.333 0.00 0.00 31.94 3.35
4792 10226 8.482128 AGTTTCCAATGTAAACCAAATTTCAGA 58.518 29.630 0.00 0.00 37.51 3.27
4793 10227 8.661352 AGTTTCCAATGTAAACCAAATTTCAG 57.339 30.769 0.00 0.00 37.51 3.02
4794 10228 8.482128 AGAGTTTCCAATGTAAACCAAATTTCA 58.518 29.630 0.00 0.00 37.51 2.69
4795 10229 8.887036 AGAGTTTCCAATGTAAACCAAATTTC 57.113 30.769 0.00 0.00 37.51 2.17
4796 10230 9.108284 CAAGAGTTTCCAATGTAAACCAAATTT 57.892 29.630 0.00 0.00 37.51 1.82
4797 10231 8.264347 ACAAGAGTTTCCAATGTAAACCAAATT 58.736 29.630 0.00 0.00 37.51 1.82
4798 10232 7.791029 ACAAGAGTTTCCAATGTAAACCAAAT 58.209 30.769 0.00 0.00 37.51 2.32
4799 10233 7.176589 ACAAGAGTTTCCAATGTAAACCAAA 57.823 32.000 0.00 0.00 37.51 3.28
4800 10234 6.783708 ACAAGAGTTTCCAATGTAAACCAA 57.216 33.333 0.00 0.00 37.51 3.67
4801 10235 6.568869 CAACAAGAGTTTCCAATGTAAACCA 58.431 36.000 0.00 0.00 37.51 3.67
4802 10236 5.462068 GCAACAAGAGTTTCCAATGTAAACC 59.538 40.000 0.00 0.00 37.51 3.27
4803 10237 5.462068 GGCAACAAGAGTTTCCAATGTAAAC 59.538 40.000 0.00 0.00 40.28 2.01
4804 10238 5.362430 AGGCAACAAGAGTTTCCAATGTAAA 59.638 36.000 0.30 0.00 42.61 2.01
4805 10239 4.892934 AGGCAACAAGAGTTTCCAATGTAA 59.107 37.500 0.30 0.00 42.61 2.41
4806 10240 4.278170 CAGGCAACAAGAGTTTCCAATGTA 59.722 41.667 0.30 0.00 42.61 2.29
4807 10241 3.068590 CAGGCAACAAGAGTTTCCAATGT 59.931 43.478 0.30 0.00 42.61 2.71
4808 10242 3.068590 ACAGGCAACAAGAGTTTCCAATG 59.931 43.478 0.30 0.00 42.61 2.82
4809 10243 3.299503 ACAGGCAACAAGAGTTTCCAAT 58.700 40.909 0.30 0.00 42.61 3.16
4810 10244 2.733956 ACAGGCAACAAGAGTTTCCAA 58.266 42.857 0.30 0.00 42.61 3.53
4811 10245 2.426738 CAACAGGCAACAAGAGTTTCCA 59.573 45.455 0.30 0.00 42.61 3.53
4812 10246 2.223805 CCAACAGGCAACAAGAGTTTCC 60.224 50.000 0.00 0.00 40.78 3.13
4813 10247 2.427095 ACCAACAGGCAACAAGAGTTTC 59.573 45.455 0.00 0.00 35.28 2.78
4814 10248 2.456577 ACCAACAGGCAACAAGAGTTT 58.543 42.857 0.00 0.00 35.28 2.66
4815 10249 2.143876 ACCAACAGGCAACAAGAGTT 57.856 45.000 0.00 0.00 38.88 3.01
4816 10250 2.024414 GAACCAACAGGCAACAAGAGT 58.976 47.619 0.00 0.00 41.41 3.24
4817 10251 2.023673 TGAACCAACAGGCAACAAGAG 58.976 47.619 0.00 0.00 41.41 2.85
4818 10252 1.748493 GTGAACCAACAGGCAACAAGA 59.252 47.619 0.00 0.00 41.41 3.02
4819 10253 1.533756 CGTGAACCAACAGGCAACAAG 60.534 52.381 0.00 0.00 41.41 3.16
4820 10254 0.453793 CGTGAACCAACAGGCAACAA 59.546 50.000 0.00 0.00 41.41 2.83
4821 10255 0.678366 ACGTGAACCAACAGGCAACA 60.678 50.000 0.00 0.00 41.41 3.33
4822 10256 0.248458 CACGTGAACCAACAGGCAAC 60.248 55.000 10.90 0.00 0.00 4.17
4823 10257 0.393132 TCACGTGAACCAACAGGCAA 60.393 50.000 17.62 0.00 0.00 4.52
4824 10258 0.813610 CTCACGTGAACCAACAGGCA 60.814 55.000 20.49 0.00 0.00 4.75
4825 10259 0.814010 ACTCACGTGAACCAACAGGC 60.814 55.000 20.49 0.00 0.00 4.85
4826 10260 2.132762 GTACTCACGTGAACCAACAGG 58.867 52.381 20.49 7.65 0.00 4.00
4827 10261 2.538449 GTGTACTCACGTGAACCAACAG 59.462 50.000 20.49 8.42 34.79 3.16
4828 10262 2.542597 GTGTACTCACGTGAACCAACA 58.457 47.619 20.49 16.78 34.79 3.33
4839 10273 4.449068 CAGGTTGTCATGAAGTGTACTCAC 59.551 45.833 0.00 0.00 44.15 3.51
4840 10274 4.503123 CCAGGTTGTCATGAAGTGTACTCA 60.503 45.833 0.00 0.00 0.00 3.41
4841 10275 3.997021 CCAGGTTGTCATGAAGTGTACTC 59.003 47.826 0.00 0.00 0.00 2.59
4842 10276 3.391296 ACCAGGTTGTCATGAAGTGTACT 59.609 43.478 0.00 0.00 0.00 2.73
4843 10277 3.740115 ACCAGGTTGTCATGAAGTGTAC 58.260 45.455 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.