Multiple sequence alignment - TraesCS2B01G055400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G055400 chr2B 100.000 3172 0 0 1 3172 27009387 27012558 0.000000e+00 5858.0
1 TraesCS2B01G055400 chr2B 80.807 1412 206 31 670 2066 26925245 26926606 0.000000e+00 1046.0
2 TraesCS2B01G055400 chr2B 85.491 641 67 19 1799 2419 26929967 26930601 0.000000e+00 645.0
3 TraesCS2B01G055400 chr2B 86.449 428 18 8 153 579 26929375 26929763 1.750000e-117 433.0
4 TraesCS2B01G055400 chr2B 93.333 210 14 0 719 928 26929766 26929975 8.540000e-81 311.0
5 TraesCS2B01G055400 chr2B 85.827 127 15 2 153 276 26896548 26896674 7.140000e-27 132.0
6 TraesCS2B01G055400 chr2B 93.258 89 4 1 27 113 26896472 26896560 2.570000e-26 130.0
7 TraesCS2B01G055400 chr2B 100.000 45 0 0 298 342 26896676 26896720 2.030000e-12 84.2
8 TraesCS2B01G055400 chr2D 91.326 1787 123 17 362 2132 14970318 14972088 0.000000e+00 2412.0
9 TraesCS2B01G055400 chr2D 83.920 199 10 3 2214 2397 14972196 14972387 1.510000e-38 171.0
10 TraesCS2B01G055400 chr2D 83.529 170 18 5 2534 2703 43474100 43473941 1.970000e-32 150.0
11 TraesCS2B01G055400 chr2D 100.000 28 0 0 2130 2157 14972152 14972179 6.000000e-03 52.8
12 TraesCS2B01G055400 chr2A 90.979 1818 124 17 258 2062 17117734 17119524 0.000000e+00 2412.0
13 TraesCS2B01G055400 chr2A 71.732 941 195 53 1145 2060 15449587 15448693 6.940000e-47 198.0
14 TraesCS2B01G055400 chr7B 84.263 1417 150 40 670 2059 712766774 712768144 0.000000e+00 1314.0
15 TraesCS2B01G055400 chr7B 80.000 270 29 10 2851 3120 732058167 732058411 3.250000e-40 176.0
16 TraesCS2B01G055400 chr7B 84.043 188 25 5 2945 3129 732333362 732333177 3.250000e-40 176.0
17 TraesCS2B01G055400 chr7B 84.358 179 23 5 2945 3120 731996847 731997023 1.510000e-38 171.0
18 TraesCS2B01G055400 chr7B 83.333 186 30 1 2945 3129 732299726 732299541 1.510000e-38 171.0
19 TraesCS2B01G055400 chr7B 91.753 97 8 0 2851 2947 731996779 731996875 5.520000e-28 135.0
20 TraesCS2B01G055400 chr3D 80.069 1450 212 48 663 2086 7023346 7021948 0.000000e+00 1005.0
21 TraesCS2B01G055400 chr3D 89.899 99 9 1 2657 2755 53816528 53816625 3.320000e-25 126.0
22 TraesCS2B01G055400 chr3A 78.912 1342 204 51 759 2086 13363472 13364748 0.000000e+00 837.0
23 TraesCS2B01G055400 chr1D 75.681 1028 182 34 1083 2067 476249193 476248191 4.820000e-123 451.0
24 TraesCS2B01G055400 chr4D 87.273 330 42 0 2843 3172 58629028 58629357 8.310000e-101 377.0
25 TraesCS2B01G055400 chr4D 84.431 334 26 10 2419 2727 61154822 61155154 3.970000e-79 305.0
26 TraesCS2B01G055400 chr4D 81.346 327 34 8 2846 3172 61155165 61155464 1.140000e-59 241.0
27 TraesCS2B01G055400 chr4D 82.941 170 19 5 2534 2703 478743670 478743511 9.170000e-31 145.0
28 TraesCS2B01G055400 chr4D 82.941 170 19 5 2534 2703 478744471 478744312 9.170000e-31 145.0
29 TraesCS2B01G055400 chr1B 72.690 985 212 43 857 1814 2559735 2558781 3.120000e-70 276.0
30 TraesCS2B01G055400 chr1B 72.459 984 216 41 857 1814 2620478 2619524 6.750000e-67 265.0
31 TraesCS2B01G055400 chr1B 77.157 197 19 15 2419 2593 543741575 543741767 1.210000e-14 91.6
32 TraesCS2B01G055400 chr3B 79.263 434 56 24 680 1104 8522641 8522233 4.030000e-69 272.0
33 TraesCS2B01G055400 chr3B 85.417 240 29 3 2531 2769 361765688 361765922 8.790000e-61 244.0
34 TraesCS2B01G055400 chr3B 84.651 215 31 2 1854 2067 8521866 8521653 2.480000e-51 213.0
35 TraesCS2B01G055400 chr3B 86.702 188 23 2 2543 2729 801419643 801419457 1.150000e-49 207.0
36 TraesCS2B01G055400 chr3B 81.696 224 37 4 2947 3168 804793581 804793360 1.940000e-42 183.0
37 TraesCS2B01G055400 chr3B 89.041 73 7 1 2657 2729 661737170 661737241 4.360000e-14 89.8
38 TraesCS2B01G055400 chr3B 89.041 73 7 1 2657 2729 661769861 661769932 4.360000e-14 89.8
39 TraesCS2B01G055400 chrUn 72.589 985 213 43 857 1814 323412768 323411814 1.450000e-68 270.0
40 TraesCS2B01G055400 chrUn 80.000 270 29 10 2851 3120 160353604 160353848 3.250000e-40 176.0
41 TraesCS2B01G055400 chrUn 80.000 270 29 10 2851 3120 390507291 390507535 3.250000e-40 176.0
42 TraesCS2B01G055400 chrUn 79.630 270 30 10 2851 3120 160295412 160295656 1.510000e-38 171.0
43 TraesCS2B01G055400 chrUn 83.616 177 28 1 2945 3120 160417834 160418010 7.040000e-37 165.0
44 TraesCS2B01G055400 chrUn 79.336 271 29 8 2851 3120 294254287 294254531 7.040000e-37 165.0
45 TraesCS2B01G055400 chrUn 90.722 97 9 0 2851 2947 160417766 160417862 2.570000e-26 130.0
46 TraesCS2B01G055400 chrUn 71.941 474 103 20 1347 1814 335761529 335761978 9.300000e-21 111.0
47 TraesCS2B01G055400 chr5B 80.519 308 37 10 2419 2703 546559824 546559517 6.890000e-52 215.0
48 TraesCS2B01G055400 chr5B 80.195 308 38 10 2419 2703 547586017 547585710 3.210000e-50 209.0
49 TraesCS2B01G055400 chr5A 81.448 221 38 3 2947 3166 119032915 119032697 9.040000e-41 178.0
50 TraesCS2B01G055400 chr7A 100.000 32 0 0 2419 2450 524163554 524163523 3.420000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G055400 chr2B 27009387 27012558 3171 False 5858.00 5858 100.000000 1 3172 1 chr2B.!!$F1 3171
1 TraesCS2B01G055400 chr2B 26925245 26930601 5356 False 608.75 1046 86.520000 153 2419 4 chr2B.!!$F3 2266
2 TraesCS2B01G055400 chr2D 14970318 14972387 2069 False 878.60 2412 91.748667 362 2397 3 chr2D.!!$F1 2035
3 TraesCS2B01G055400 chr2A 17117734 17119524 1790 False 2412.00 2412 90.979000 258 2062 1 chr2A.!!$F1 1804
4 TraesCS2B01G055400 chr7B 712766774 712768144 1370 False 1314.00 1314 84.263000 670 2059 1 chr7B.!!$F1 1389
5 TraesCS2B01G055400 chr3D 7021948 7023346 1398 True 1005.00 1005 80.069000 663 2086 1 chr3D.!!$R1 1423
6 TraesCS2B01G055400 chr3A 13363472 13364748 1276 False 837.00 837 78.912000 759 2086 1 chr3A.!!$F1 1327
7 TraesCS2B01G055400 chr1D 476248191 476249193 1002 True 451.00 451 75.681000 1083 2067 1 chr1D.!!$R1 984
8 TraesCS2B01G055400 chr4D 61154822 61155464 642 False 273.00 305 82.888500 2419 3172 2 chr4D.!!$F2 753
9 TraesCS2B01G055400 chr1B 2558781 2559735 954 True 276.00 276 72.690000 857 1814 1 chr1B.!!$R1 957
10 TraesCS2B01G055400 chr1B 2619524 2620478 954 True 265.00 265 72.459000 857 1814 1 chr1B.!!$R2 957
11 TraesCS2B01G055400 chr3B 8521653 8522641 988 True 242.50 272 81.957000 680 2067 2 chr3B.!!$R3 1387
12 TraesCS2B01G055400 chrUn 323411814 323412768 954 True 270.00 270 72.589000 857 1814 1 chrUn.!!$R1 957

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 93 0.036010 CCATCCGGACAGTTTGAGCT 60.036 55.0 6.12 0.00 0.0 4.09 F
226 227 0.165944 GGACGCATGCACACAGTAAC 59.834 55.0 19.57 0.19 0.0 2.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1736 1882 1.287730 CGCTCTGTTCAGCAGTGACC 61.288 60.0 0.0 0.0 45.23 4.02 R
2218 6080 0.192566 AGGGTACAGGTTCAGTCCCA 59.807 55.0 0.0 0.0 37.56 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.314393 AGTTAACTGCTCTGTAGTTAGTTAGC 58.686 38.462 7.48 0.00 40.55 3.09
26 27 4.358494 ACTGCTCTGTAGTTAGTTAGCG 57.642 45.455 0.00 0.00 32.67 4.26
27 28 3.757493 ACTGCTCTGTAGTTAGTTAGCGT 59.243 43.478 0.00 0.00 32.67 5.07
28 29 4.092771 TGCTCTGTAGTTAGTTAGCGTG 57.907 45.455 0.00 0.00 32.67 5.34
29 30 3.504906 TGCTCTGTAGTTAGTTAGCGTGT 59.495 43.478 0.00 0.00 32.67 4.49
30 31 4.097012 GCTCTGTAGTTAGTTAGCGTGTC 58.903 47.826 0.00 0.00 0.00 3.67
31 32 4.379186 GCTCTGTAGTTAGTTAGCGTGTCA 60.379 45.833 0.00 0.00 0.00 3.58
32 33 5.292671 TCTGTAGTTAGTTAGCGTGTCAG 57.707 43.478 0.00 0.00 0.00 3.51
33 34 4.758674 TCTGTAGTTAGTTAGCGTGTCAGT 59.241 41.667 0.00 0.00 0.00 3.41
34 35 4.790878 TGTAGTTAGTTAGCGTGTCAGTG 58.209 43.478 0.00 0.00 0.00 3.66
35 36 4.276678 TGTAGTTAGTTAGCGTGTCAGTGT 59.723 41.667 0.00 0.00 0.00 3.55
36 37 4.317671 AGTTAGTTAGCGTGTCAGTGTT 57.682 40.909 0.00 0.00 0.00 3.32
37 38 4.296690 AGTTAGTTAGCGTGTCAGTGTTC 58.703 43.478 0.00 0.00 0.00 3.18
38 39 1.767289 AGTTAGCGTGTCAGTGTTCG 58.233 50.000 0.00 0.00 0.00 3.95
39 40 1.335810 AGTTAGCGTGTCAGTGTTCGA 59.664 47.619 8.07 0.00 0.00 3.71
40 41 2.030185 AGTTAGCGTGTCAGTGTTCGAT 60.030 45.455 8.07 4.98 0.00 3.59
41 42 2.717580 TAGCGTGTCAGTGTTCGATT 57.282 45.000 8.07 0.50 0.00 3.34
42 43 1.139989 AGCGTGTCAGTGTTCGATTG 58.860 50.000 8.07 0.00 0.00 2.67
43 44 0.859232 GCGTGTCAGTGTTCGATTGT 59.141 50.000 8.07 0.00 0.00 2.71
44 45 1.397190 GCGTGTCAGTGTTCGATTGTG 60.397 52.381 8.07 0.00 0.00 3.33
45 46 1.858458 CGTGTCAGTGTTCGATTGTGT 59.142 47.619 0.00 0.00 0.00 3.72
46 47 2.284150 CGTGTCAGTGTTCGATTGTGTT 59.716 45.455 0.00 0.00 0.00 3.32
47 48 3.242284 CGTGTCAGTGTTCGATTGTGTTT 60.242 43.478 0.00 0.00 0.00 2.83
48 49 4.658071 GTGTCAGTGTTCGATTGTGTTTT 58.342 39.130 0.00 0.00 0.00 2.43
49 50 5.501092 CGTGTCAGTGTTCGATTGTGTTTTA 60.501 40.000 0.00 0.00 0.00 1.52
50 51 5.675444 GTGTCAGTGTTCGATTGTGTTTTAC 59.325 40.000 0.00 0.00 0.00 2.01
51 52 5.202640 GTCAGTGTTCGATTGTGTTTTACC 58.797 41.667 0.00 0.00 0.00 2.85
52 53 5.007332 GTCAGTGTTCGATTGTGTTTTACCT 59.993 40.000 0.00 0.00 0.00 3.08
53 54 5.235616 TCAGTGTTCGATTGTGTTTTACCTC 59.764 40.000 0.00 0.00 0.00 3.85
54 55 4.514066 AGTGTTCGATTGTGTTTTACCTCC 59.486 41.667 0.00 0.00 0.00 4.30
55 56 3.816523 TGTTCGATTGTGTTTTACCTCCC 59.183 43.478 0.00 0.00 0.00 4.30
56 57 3.062122 TCGATTGTGTTTTACCTCCCC 57.938 47.619 0.00 0.00 0.00 4.81
57 58 2.640826 TCGATTGTGTTTTACCTCCCCT 59.359 45.455 0.00 0.00 0.00 4.79
58 59 2.747446 CGATTGTGTTTTACCTCCCCTG 59.253 50.000 0.00 0.00 0.00 4.45
59 60 1.989706 TTGTGTTTTACCTCCCCTGC 58.010 50.000 0.00 0.00 0.00 4.85
60 61 0.250553 TGTGTTTTACCTCCCCTGCG 60.251 55.000 0.00 0.00 0.00 5.18
61 62 0.250597 GTGTTTTACCTCCCCTGCGT 60.251 55.000 0.00 0.00 0.00 5.24
62 63 0.475044 TGTTTTACCTCCCCTGCGTT 59.525 50.000 0.00 0.00 0.00 4.84
63 64 0.879090 GTTTTACCTCCCCTGCGTTG 59.121 55.000 0.00 0.00 0.00 4.10
64 65 0.250989 TTTTACCTCCCCTGCGTTGG 60.251 55.000 0.00 0.00 0.00 3.77
65 66 1.420532 TTTACCTCCCCTGCGTTGGT 61.421 55.000 0.00 0.00 35.05 3.67
66 67 1.420532 TTACCTCCCCTGCGTTGGTT 61.421 55.000 0.00 0.00 32.74 3.67
67 68 1.420532 TACCTCCCCTGCGTTGGTTT 61.421 55.000 0.00 0.00 32.74 3.27
68 69 1.971695 CCTCCCCTGCGTTGGTTTC 60.972 63.158 0.00 0.00 0.00 2.78
69 70 1.971695 CTCCCCTGCGTTGGTTTCC 60.972 63.158 0.00 0.00 0.00 3.13
70 71 2.115266 CCCCTGCGTTGGTTTCCT 59.885 61.111 0.00 0.00 0.00 3.36
71 72 1.530655 CCCCTGCGTTGGTTTCCTT 60.531 57.895 0.00 0.00 0.00 3.36
72 73 0.250989 CCCCTGCGTTGGTTTCCTTA 60.251 55.000 0.00 0.00 0.00 2.69
73 74 0.879090 CCCTGCGTTGGTTTCCTTAC 59.121 55.000 0.00 0.00 0.00 2.34
74 75 0.879090 CCTGCGTTGGTTTCCTTACC 59.121 55.000 0.00 0.00 38.73 2.85
75 76 1.600023 CTGCGTTGGTTTCCTTACCA 58.400 50.000 0.00 0.00 46.23 3.25
81 82 1.659022 TGGTTTCCTTACCATCCGGA 58.341 50.000 6.61 6.61 43.14 5.14
82 83 1.279846 TGGTTTCCTTACCATCCGGAC 59.720 52.381 6.12 0.00 43.14 4.79
83 84 1.279846 GGTTTCCTTACCATCCGGACA 59.720 52.381 6.12 0.00 38.12 4.02
84 85 2.629051 GTTTCCTTACCATCCGGACAG 58.371 52.381 6.12 2.99 35.59 3.51
85 86 1.946984 TTCCTTACCATCCGGACAGT 58.053 50.000 6.12 10.24 35.59 3.55
86 87 1.946984 TCCTTACCATCCGGACAGTT 58.053 50.000 6.12 0.00 35.59 3.16
87 88 2.262637 TCCTTACCATCCGGACAGTTT 58.737 47.619 6.12 0.00 35.59 2.66
88 89 2.027561 TCCTTACCATCCGGACAGTTTG 60.028 50.000 6.12 0.00 35.59 2.93
89 90 2.027561 CCTTACCATCCGGACAGTTTGA 60.028 50.000 6.12 0.00 35.59 2.69
90 91 3.262420 CTTACCATCCGGACAGTTTGAG 58.738 50.000 6.12 2.93 35.59 3.02
91 92 0.321653 ACCATCCGGACAGTTTGAGC 60.322 55.000 6.12 0.00 35.59 4.26
92 93 0.036010 CCATCCGGACAGTTTGAGCT 60.036 55.000 6.12 0.00 0.00 4.09
93 94 1.081892 CATCCGGACAGTTTGAGCTG 58.918 55.000 6.12 0.00 41.92 4.24
102 103 3.931578 ACAGTTTGAGCTGTCATACTCC 58.068 45.455 0.00 0.00 45.63 3.85
103 104 3.324846 ACAGTTTGAGCTGTCATACTCCA 59.675 43.478 0.00 0.00 45.63 3.86
104 105 3.931468 CAGTTTGAGCTGTCATACTCCAG 59.069 47.826 0.00 0.00 41.48 3.86
105 106 3.834813 AGTTTGAGCTGTCATACTCCAGA 59.165 43.478 0.00 0.00 39.91 3.86
106 107 4.284490 AGTTTGAGCTGTCATACTCCAGAA 59.716 41.667 0.00 0.00 39.91 3.02
107 108 4.890158 TTGAGCTGTCATACTCCAGAAA 57.110 40.909 0.00 0.00 30.85 2.52
108 109 4.462508 TGAGCTGTCATACTCCAGAAAG 57.537 45.455 0.00 0.00 31.65 2.62
109 110 3.196469 TGAGCTGTCATACTCCAGAAAGG 59.804 47.826 0.00 0.00 39.47 3.11
110 111 3.445008 AGCTGTCATACTCCAGAAAGGA 58.555 45.455 0.00 0.00 46.75 3.36
111 112 7.932106 TTGAGCTGTCATACTCCAGAAAGGAA 61.932 42.308 0.00 0.00 38.15 3.36
112 113 9.832533 TTGAGCTGTCATACTCCAGAAAGGAAC 62.833 44.444 0.00 0.00 38.15 3.62
161 162 6.693315 TTTTGAAACTACAGTCCAGAAAGG 57.307 37.500 0.00 0.00 39.47 3.11
162 163 5.623956 TTGAAACTACAGTCCAGAAAGGA 57.376 39.130 0.00 0.00 46.75 3.36
178 179 2.610438 AGGAACTCCCTACCGTACAA 57.390 50.000 0.00 0.00 45.48 2.41
179 180 3.111741 AGGAACTCCCTACCGTACAAT 57.888 47.619 0.00 0.00 45.48 2.71
180 181 3.029570 AGGAACTCCCTACCGTACAATC 58.970 50.000 0.00 0.00 45.48 2.67
181 182 2.762327 GGAACTCCCTACCGTACAATCA 59.238 50.000 0.00 0.00 0.00 2.57
182 183 3.196254 GGAACTCCCTACCGTACAATCAA 59.804 47.826 0.00 0.00 0.00 2.57
183 184 4.430908 GAACTCCCTACCGTACAATCAAG 58.569 47.826 0.00 0.00 0.00 3.02
184 185 3.438183 ACTCCCTACCGTACAATCAAGT 58.562 45.455 0.00 0.00 0.00 3.16
185 186 3.194968 ACTCCCTACCGTACAATCAAGTG 59.805 47.826 0.00 0.00 0.00 3.16
186 187 2.498481 TCCCTACCGTACAATCAAGTGG 59.502 50.000 0.00 0.00 0.00 4.00
187 188 2.277084 CCTACCGTACAATCAAGTGGC 58.723 52.381 0.00 0.00 0.00 5.01
188 189 2.354303 CCTACCGTACAATCAAGTGGCA 60.354 50.000 0.00 0.00 0.00 4.92
189 190 2.264005 ACCGTACAATCAAGTGGCAA 57.736 45.000 0.00 0.00 0.00 4.52
190 191 2.790433 ACCGTACAATCAAGTGGCAAT 58.210 42.857 0.00 0.00 0.00 3.56
191 192 3.945346 ACCGTACAATCAAGTGGCAATA 58.055 40.909 0.00 0.00 0.00 1.90
192 193 3.687698 ACCGTACAATCAAGTGGCAATAC 59.312 43.478 0.00 0.00 0.00 1.89
193 194 3.242284 CCGTACAATCAAGTGGCAATACG 60.242 47.826 0.00 0.00 35.21 3.06
194 195 3.615056 CGTACAATCAAGTGGCAATACGA 59.385 43.478 0.00 0.00 37.04 3.43
195 196 4.491924 CGTACAATCAAGTGGCAATACGAC 60.492 45.833 0.00 0.00 37.04 4.34
196 197 3.407698 ACAATCAAGTGGCAATACGACA 58.592 40.909 0.00 0.00 0.00 4.35
197 198 4.009675 ACAATCAAGTGGCAATACGACAT 58.990 39.130 0.00 0.00 32.69 3.06
198 199 5.182487 ACAATCAAGTGGCAATACGACATA 58.818 37.500 0.00 0.00 32.69 2.29
199 200 5.064707 ACAATCAAGTGGCAATACGACATAC 59.935 40.000 0.00 0.00 32.69 2.39
200 201 4.465632 TCAAGTGGCAATACGACATACT 57.534 40.909 0.00 0.00 32.69 2.12
201 202 4.827692 TCAAGTGGCAATACGACATACTT 58.172 39.130 0.00 0.00 32.69 2.24
202 203 5.242434 TCAAGTGGCAATACGACATACTTT 58.758 37.500 0.00 0.00 32.69 2.66
203 204 5.350365 TCAAGTGGCAATACGACATACTTTC 59.650 40.000 0.00 0.00 32.69 2.62
204 205 4.827692 AGTGGCAATACGACATACTTTCA 58.172 39.130 0.00 0.00 32.69 2.69
205 206 5.242434 AGTGGCAATACGACATACTTTCAA 58.758 37.500 0.00 0.00 32.69 2.69
206 207 5.121768 AGTGGCAATACGACATACTTTCAAC 59.878 40.000 0.00 0.00 32.69 3.18
207 208 4.092237 TGGCAATACGACATACTTTCAACG 59.908 41.667 0.00 0.00 0.00 4.10
208 209 4.493545 GGCAATACGACATACTTTCAACGG 60.494 45.833 0.00 0.00 0.00 4.44
209 210 4.327898 GCAATACGACATACTTTCAACGGA 59.672 41.667 0.00 0.00 0.00 4.69
210 211 5.723135 GCAATACGACATACTTTCAACGGAC 60.723 44.000 0.00 0.00 0.00 4.79
211 212 2.322161 ACGACATACTTTCAACGGACG 58.678 47.619 0.00 0.00 0.00 4.79
212 213 1.058695 CGACATACTTTCAACGGACGC 59.941 52.381 0.00 0.00 0.00 5.19
213 214 2.063266 GACATACTTTCAACGGACGCA 58.937 47.619 0.00 0.00 0.00 5.24
214 215 2.671396 GACATACTTTCAACGGACGCAT 59.329 45.455 0.00 0.00 0.00 4.73
215 216 2.415168 ACATACTTTCAACGGACGCATG 59.585 45.455 0.00 0.00 0.00 4.06
216 217 0.793861 TACTTTCAACGGACGCATGC 59.206 50.000 7.91 7.91 0.00 4.06
217 218 1.163420 ACTTTCAACGGACGCATGCA 61.163 50.000 19.57 0.00 0.00 3.96
218 219 0.725784 CTTTCAACGGACGCATGCAC 60.726 55.000 19.57 10.85 0.00 4.57
219 220 1.440145 TTTCAACGGACGCATGCACA 61.440 50.000 19.57 0.00 0.00 4.57
220 221 2.111932 TTCAACGGACGCATGCACAC 62.112 55.000 19.57 7.83 0.00 3.82
221 222 2.590291 AACGGACGCATGCACACA 60.590 55.556 19.57 0.00 0.00 3.72
222 223 2.606961 AACGGACGCATGCACACAG 61.607 57.895 19.57 10.91 0.00 3.66
223 224 3.043713 CGGACGCATGCACACAGT 61.044 61.111 19.57 6.70 0.00 3.55
224 225 1.736282 CGGACGCATGCACACAGTA 60.736 57.895 19.57 0.00 0.00 2.74
225 226 1.288419 CGGACGCATGCACACAGTAA 61.288 55.000 19.57 0.00 0.00 2.24
226 227 0.165944 GGACGCATGCACACAGTAAC 59.834 55.000 19.57 0.19 0.00 2.50
227 228 1.148310 GACGCATGCACACAGTAACT 58.852 50.000 19.57 0.00 0.00 2.24
228 229 0.867746 ACGCATGCACACAGTAACTG 59.132 50.000 19.57 0.00 37.52 3.16
229 230 0.166597 CGCATGCACACAGTAACTGG 59.833 55.000 19.57 0.00 35.51 4.00
230 231 1.522668 GCATGCACACAGTAACTGGA 58.477 50.000 14.21 0.00 35.51 3.86
231 232 1.466167 GCATGCACACAGTAACTGGAG 59.534 52.381 14.21 0.00 35.51 3.86
232 233 1.466167 CATGCACACAGTAACTGGAGC 59.534 52.381 0.00 0.00 35.51 4.70
233 234 0.467804 TGCACACAGTAACTGGAGCA 59.532 50.000 0.00 0.00 35.52 4.26
234 235 1.151668 GCACACAGTAACTGGAGCAG 58.848 55.000 0.00 0.00 35.51 4.24
235 236 1.270305 GCACACAGTAACTGGAGCAGA 60.270 52.381 0.00 0.00 35.51 4.26
236 237 2.806745 GCACACAGTAACTGGAGCAGAA 60.807 50.000 0.00 0.00 35.51 3.02
237 238 2.802816 CACACAGTAACTGGAGCAGAAC 59.197 50.000 0.00 0.00 35.51 3.01
238 239 2.700897 ACACAGTAACTGGAGCAGAACT 59.299 45.455 0.00 0.00 35.51 3.01
239 240 3.062763 CACAGTAACTGGAGCAGAACTG 58.937 50.000 6.64 6.64 45.16 3.16
240 241 2.965831 ACAGTAACTGGAGCAGAACTGA 59.034 45.455 10.81 0.00 43.91 3.41
241 242 3.388024 ACAGTAACTGGAGCAGAACTGAA 59.612 43.478 10.81 0.00 43.91 3.02
242 243 4.141711 ACAGTAACTGGAGCAGAACTGAAA 60.142 41.667 10.81 0.00 43.91 2.69
243 244 4.212214 CAGTAACTGGAGCAGAACTGAAAC 59.788 45.833 5.97 0.00 43.91 2.78
244 245 3.567478 AACTGGAGCAGAACTGAAACT 57.433 42.857 5.97 0.00 35.18 2.66
245 246 2.843701 ACTGGAGCAGAACTGAAACTG 58.156 47.619 5.97 0.00 35.18 3.16
246 247 2.435805 ACTGGAGCAGAACTGAAACTGA 59.564 45.455 5.97 0.00 36.38 3.41
247 248 3.118261 ACTGGAGCAGAACTGAAACTGAA 60.118 43.478 5.97 0.00 36.38 3.02
248 249 3.470709 TGGAGCAGAACTGAAACTGAAG 58.529 45.455 5.97 0.00 36.38 3.02
249 250 2.225255 GGAGCAGAACTGAAACTGAAGC 59.775 50.000 5.97 0.00 36.38 3.86
250 251 2.874701 GAGCAGAACTGAAACTGAAGCA 59.125 45.455 5.97 0.00 36.38 3.91
251 252 2.615912 AGCAGAACTGAAACTGAAGCAC 59.384 45.455 5.97 0.00 36.38 4.40
252 253 2.355756 GCAGAACTGAAACTGAAGCACA 59.644 45.455 5.97 0.00 36.38 4.57
253 254 3.004106 GCAGAACTGAAACTGAAGCACAT 59.996 43.478 5.97 0.00 36.38 3.21
254 255 4.534168 CAGAACTGAAACTGAAGCACATG 58.466 43.478 0.00 0.00 36.38 3.21
255 256 4.274214 CAGAACTGAAACTGAAGCACATGA 59.726 41.667 0.00 0.00 36.38 3.07
256 257 4.514441 AGAACTGAAACTGAAGCACATGAG 59.486 41.667 0.00 0.00 0.00 2.90
288 289 7.322664 AGCTGAAACTGAAACTCAAAATTCAA 58.677 30.769 0.00 0.00 35.31 2.69
376 377 2.133281 AGCTGCATATGCCTTCACAA 57.867 45.000 24.54 3.35 41.18 3.33
418 427 0.911769 TGCTCCCGGTTGAGATTGAT 59.088 50.000 11.50 0.00 34.11 2.57
419 428 1.303309 GCTCCCGGTTGAGATTGATG 58.697 55.000 11.50 0.00 34.11 3.07
420 429 1.134401 GCTCCCGGTTGAGATTGATGA 60.134 52.381 11.50 0.00 34.11 2.92
512 521 1.415659 CGATCAGAGCAGATTTCCCCT 59.584 52.381 0.00 0.00 0.00 4.79
540 549 7.606349 TCTTTAACATATCTGATCTGATCCGG 58.394 38.462 17.39 11.10 0.00 5.14
544 553 4.958581 ACATATCTGATCTGATCCGGCATA 59.041 41.667 17.39 4.52 0.00 3.14
550 559 4.780815 TGATCTGATCCGGCATAAACTTT 58.219 39.130 14.71 0.00 0.00 2.66
551 560 4.576053 TGATCTGATCCGGCATAAACTTTG 59.424 41.667 14.71 0.00 0.00 2.77
552 561 4.214986 TCTGATCCGGCATAAACTTTGA 57.785 40.909 0.00 0.00 0.00 2.69
553 562 4.780815 TCTGATCCGGCATAAACTTTGAT 58.219 39.130 0.00 0.00 0.00 2.57
554 563 4.576053 TCTGATCCGGCATAAACTTTGATG 59.424 41.667 0.00 0.00 0.00 3.07
555 564 3.066621 TGATCCGGCATAAACTTTGATGC 59.933 43.478 0.00 2.95 46.31 3.91
579 588 7.863877 TGCACAATTTGATGCTGATATAATCAC 59.136 33.333 18.26 0.00 42.55 3.06
600 613 8.923838 ATCACCATATAAATAGAGGAGTCCAT 57.076 34.615 12.86 1.63 0.00 3.41
607 620 2.685106 TAGAGGAGTCCATAGGCCAG 57.315 55.000 12.86 0.00 0.00 4.85
633 646 8.694394 GTCACAGCAAATTAAACAATCTTCTTC 58.306 33.333 0.00 0.00 0.00 2.87
668 686 2.154462 CAGCCGAAAGAACAGAACCAT 58.846 47.619 0.00 0.00 0.00 3.55
696 717 0.877649 ATGTCCAGATCATGTCGCGC 60.878 55.000 0.00 0.00 0.00 6.86
778 805 2.786495 CCGTGGGACCTCTCGATGG 61.786 68.421 3.40 3.40 0.00 3.51
808 835 1.066143 AGTACAACCAGAAGGGCATCG 60.066 52.381 0.00 0.00 42.05 3.84
924 955 1.305213 TTTCTACCCCTACGCCGGT 60.305 57.895 1.90 0.00 36.08 5.28
949 986 3.314331 CCGTCACTGTGGGGAGCT 61.314 66.667 8.11 0.00 0.00 4.09
951 988 1.513158 CGTCACTGTGGGGAGCTAG 59.487 63.158 8.11 0.00 0.00 3.42
960 997 2.442272 GGGAGCTAGGCTGACGGA 60.442 66.667 0.00 0.00 39.88 4.69
1122 1203 3.589881 GATGGGCTGCATGGCGTC 61.590 66.667 0.50 0.00 42.84 5.19
1424 1544 2.508716 AGCATCCATCATCTGTGAAGGT 59.491 45.455 0.34 0.00 42.47 3.50
1449 1569 0.735471 GCTTCCTCAATTTCTCGGCC 59.265 55.000 0.00 0.00 0.00 6.13
1501 1633 3.770040 CCGAGATGTCCGGCACCA 61.770 66.667 0.00 0.00 40.54 4.17
1502 1634 2.202797 CGAGATGTCCGGCACCAG 60.203 66.667 0.00 0.00 0.00 4.00
1503 1635 2.512515 GAGATGTCCGGCACCAGC 60.513 66.667 0.00 0.00 41.10 4.85
1504 1636 3.315142 GAGATGTCCGGCACCAGCA 62.315 63.158 0.00 0.00 44.61 4.41
1505 1637 2.359850 GATGTCCGGCACCAGCAA 60.360 61.111 0.00 0.00 44.61 3.91
1506 1638 1.750399 GATGTCCGGCACCAGCAAT 60.750 57.895 0.00 0.00 44.61 3.56
1552 1687 4.227134 CCCTGCTCGCGCACCTAT 62.227 66.667 8.75 0.00 42.25 2.57
1553 1688 2.963854 CCTGCTCGCGCACCTATG 60.964 66.667 8.75 0.00 42.25 2.23
1554 1689 2.963854 CTGCTCGCGCACCTATGG 60.964 66.667 8.75 0.00 42.25 2.74
1863 5651 1.303317 GGCAAAGATGGTGACGGGT 60.303 57.895 0.00 0.00 0.00 5.28
1949 5738 3.039202 GCCGTGCGAACAAGATGGG 62.039 63.158 0.00 0.00 0.00 4.00
1979 5768 0.037303 ACGGTGTTCGAGGGTAGAGA 59.963 55.000 0.00 0.00 42.43 3.10
1989 5778 2.124403 GGTAGAGACGGCGGAGGA 60.124 66.667 13.24 0.00 0.00 3.71
2014 5803 2.681778 CTCTCGGGGTGTGGCTCT 60.682 66.667 0.00 0.00 0.00 4.09
2156 6018 3.512516 GGTGATGGCTTCAGCGGC 61.513 66.667 15.44 0.00 42.51 6.53
2157 6019 3.869272 GTGATGGCTTCAGCGGCG 61.869 66.667 0.51 0.51 43.26 6.46
2183 6045 5.362263 CCAAGCTTGGGATTAAATTCATGG 58.638 41.667 34.08 6.57 44.70 3.66
2184 6046 4.677673 AGCTTGGGATTAAATTCATGGC 57.322 40.909 0.00 0.00 0.00 4.40
2186 6048 4.718276 AGCTTGGGATTAAATTCATGGCTT 59.282 37.500 0.00 0.00 0.00 4.35
2188 6050 5.395546 GCTTGGGATTAAATTCATGGCTTGA 60.396 40.000 0.00 0.00 0.00 3.02
2200 6062 2.014594 GGCTTGAAACGCCCTATCG 58.985 57.895 0.00 0.00 41.73 2.92
2201 6063 0.743345 GGCTTGAAACGCCCTATCGT 60.743 55.000 0.00 0.00 45.58 3.73
2209 6071 1.477553 ACGCCCTATCGTTTGGTAGA 58.522 50.000 0.00 0.00 40.07 2.59
2210 6072 1.135721 ACGCCCTATCGTTTGGTAGAC 59.864 52.381 0.00 0.00 40.07 2.59
2211 6073 1.135527 CGCCCTATCGTTTGGTAGACA 59.864 52.381 0.00 0.00 0.00 3.41
2212 6074 2.417651 CGCCCTATCGTTTGGTAGACAA 60.418 50.000 0.00 0.00 37.28 3.18
2213 6075 3.195661 GCCCTATCGTTTGGTAGACAAG 58.804 50.000 0.00 0.00 40.82 3.16
2214 6076 3.118884 GCCCTATCGTTTGGTAGACAAGA 60.119 47.826 0.00 0.00 40.82 3.02
2215 6077 4.622220 GCCCTATCGTTTGGTAGACAAGAA 60.622 45.833 0.00 0.00 40.82 2.52
2216 6078 5.671493 CCCTATCGTTTGGTAGACAAGAAT 58.329 41.667 0.00 0.00 40.82 2.40
2217 6079 5.753921 CCCTATCGTTTGGTAGACAAGAATC 59.246 44.000 0.00 0.00 40.82 2.52
2218 6080 6.407074 CCCTATCGTTTGGTAGACAAGAATCT 60.407 42.308 0.00 0.00 40.82 2.40
2219 6081 6.477033 CCTATCGTTTGGTAGACAAGAATCTG 59.523 42.308 0.00 0.00 40.82 2.90
2329 6205 5.107453 CCTTTTAATATCCATGCGTCGAGAC 60.107 44.000 0.00 0.00 0.00 3.36
2368 6244 0.676736 GGCATCGGGTTGTCCAAAAA 59.323 50.000 0.00 0.00 34.36 1.94
2371 6247 2.736192 GCATCGGGTTGTCCAAAAATTG 59.264 45.455 0.00 0.00 34.36 2.32
2372 6248 3.553922 GCATCGGGTTGTCCAAAAATTGA 60.554 43.478 0.00 0.00 34.36 2.57
2397 6273 3.261818 AGGGTTGTGGACTAGAACTCT 57.738 47.619 0.00 0.00 38.47 3.24
2398 6274 3.588569 AGGGTTGTGGACTAGAACTCTT 58.411 45.455 0.00 0.00 40.22 2.85
2399 6275 3.579151 AGGGTTGTGGACTAGAACTCTTC 59.421 47.826 0.00 0.00 40.22 2.87
2400 6276 3.323979 GGGTTGTGGACTAGAACTCTTCA 59.676 47.826 0.00 0.00 30.64 3.02
2434 6310 2.632996 TCTGCACTAGTACATATGCCCC 59.367 50.000 1.58 0.00 37.26 5.80
2437 6313 2.368875 GCACTAGTACATATGCCCCTGT 59.631 50.000 1.58 0.00 31.71 4.00
2450 6326 2.203280 CCTGTGTTGCAACGGGGA 60.203 61.111 23.79 4.07 42.12 4.81
2454 6330 1.068434 CTGTGTTGCAACGGGGAAAAT 59.932 47.619 23.79 0.00 0.00 1.82
2455 6331 1.482593 TGTGTTGCAACGGGGAAAATT 59.517 42.857 23.79 0.00 0.00 1.82
2456 6332 2.093447 TGTGTTGCAACGGGGAAAATTT 60.093 40.909 23.79 0.00 0.00 1.82
2457 6333 2.286563 GTGTTGCAACGGGGAAAATTTG 59.713 45.455 23.79 0.00 0.00 2.32
2458 6334 2.168521 TGTTGCAACGGGGAAAATTTGA 59.831 40.909 23.79 0.00 0.00 2.69
2459 6335 2.517650 TGCAACGGGGAAAATTTGAC 57.482 45.000 0.00 0.00 0.00 3.18
2467 6346 3.068873 CGGGGAAAATTTGACAAACCTGA 59.931 43.478 1.94 0.00 0.00 3.86
2473 6352 4.853924 AATTTGACAAACCTGATTCGCT 57.146 36.364 1.94 0.00 0.00 4.93
2491 6370 1.671850 GCTTGCCACTACGCTTCACTA 60.672 52.381 0.00 0.00 0.00 2.74
2513 6392 9.778993 CACTAATATTCAATTCTGACAAACCTG 57.221 33.333 0.00 0.00 0.00 4.00
2535 6436 6.590656 TGGAAATAAGGTTATCCTGGATGT 57.409 37.500 19.42 0.00 44.35 3.06
2543 6444 3.290710 GTTATCCTGGATGTGTTGCCAT 58.709 45.455 19.42 0.00 32.89 4.40
2544 6445 1.771565 ATCCTGGATGTGTTGCCATG 58.228 50.000 8.75 0.00 32.89 3.66
2557 6458 3.450457 TGTTGCCATGGGTTGAATTATCC 59.550 43.478 15.13 0.00 0.00 2.59
2580 6481 7.174413 TCCTTATTTGGATCATGAAGTGTTGA 58.826 34.615 0.00 0.00 0.00 3.18
2591 6492 3.141398 TGAAGTGTTGATGTGAGAAGCC 58.859 45.455 0.00 0.00 0.00 4.35
2600 6501 0.320374 TGTGAGAAGCCACCCTAACG 59.680 55.000 0.00 0.00 36.26 3.18
2606 6507 1.551883 GAAGCCACCCTAACGTCCTTA 59.448 52.381 0.00 0.00 0.00 2.69
2609 6510 2.169978 AGCCACCCTAACGTCCTTAATC 59.830 50.000 0.00 0.00 0.00 1.75
2613 6514 3.129988 CACCCTAACGTCCTTAATCGACT 59.870 47.826 0.00 0.00 0.00 4.18
2619 6520 5.831702 AACGTCCTTAATCGACTCATACT 57.168 39.130 0.00 0.00 0.00 2.12
2623 6524 7.765307 ACGTCCTTAATCGACTCATACTTAAA 58.235 34.615 0.00 0.00 0.00 1.52
2647 6548 4.071423 TCTGCACTTCCATCGAATGAAAA 58.929 39.130 0.00 0.00 0.00 2.29
2651 6552 5.471797 TGCACTTCCATCGAATGAAAAAGTA 59.528 36.000 0.00 0.00 31.13 2.24
2661 6562 7.144722 TCGAATGAAAAAGTAGTGATGCATT 57.855 32.000 0.00 0.00 0.00 3.56
2693 6594 6.657541 TCTTTTAGCGGGAGAAACATACAATT 59.342 34.615 0.00 0.00 0.00 2.32
2697 6598 4.949856 AGCGGGAGAAACATACAATTTGAT 59.050 37.500 2.79 0.00 0.00 2.57
2703 6604 9.788960 GGGAGAAACATACAATTTGATTCTTAC 57.211 33.333 2.79 1.56 36.65 2.34
2716 6617 6.647334 TTGATTCTTACAAGTGCATGGAAA 57.353 33.333 0.00 0.00 0.00 3.13
2717 6618 6.839124 TGATTCTTACAAGTGCATGGAAAT 57.161 33.333 0.00 0.00 0.00 2.17
2718 6619 7.936496 TGATTCTTACAAGTGCATGGAAATA 57.064 32.000 0.00 0.00 0.00 1.40
2719 6620 7.988737 TGATTCTTACAAGTGCATGGAAATAG 58.011 34.615 0.00 0.00 0.00 1.73
2720 6621 7.611467 TGATTCTTACAAGTGCATGGAAATAGT 59.389 33.333 0.00 0.00 0.00 2.12
2721 6622 6.985188 TCTTACAAGTGCATGGAAATAGTC 57.015 37.500 0.00 0.00 0.00 2.59
2722 6623 6.711277 TCTTACAAGTGCATGGAAATAGTCT 58.289 36.000 0.00 0.00 0.00 3.24
2725 6626 6.655078 ACAAGTGCATGGAAATAGTCTTTT 57.345 33.333 0.00 0.00 0.00 2.27
2727 6628 7.820648 ACAAGTGCATGGAAATAGTCTTTTAG 58.179 34.615 0.00 0.00 0.00 1.85
2728 6629 6.442513 AGTGCATGGAAATAGTCTTTTAGC 57.557 37.500 0.00 0.00 0.00 3.09
2729 6630 5.065218 AGTGCATGGAAATAGTCTTTTAGCG 59.935 40.000 0.00 0.00 0.00 4.26
2730 6631 5.064707 GTGCATGGAAATAGTCTTTTAGCGA 59.935 40.000 0.00 0.00 0.00 4.93
2731 6632 5.294306 TGCATGGAAATAGTCTTTTAGCGAG 59.706 40.000 0.00 0.00 0.00 5.03
2732 6633 5.523916 GCATGGAAATAGTCTTTTAGCGAGA 59.476 40.000 0.00 0.00 0.00 4.04
2734 6635 6.525578 TGGAAATAGTCTTTTAGCGAGAGA 57.474 37.500 0.00 0.00 0.00 3.10
2736 6637 7.383687 TGGAAATAGTCTTTTAGCGAGAGAAA 58.616 34.615 0.00 0.00 0.00 2.52
2737 6638 8.041323 TGGAAATAGTCTTTTAGCGAGAGAAAT 58.959 33.333 0.00 0.00 0.00 2.17
2738 6639 9.530633 GGAAATAGTCTTTTAGCGAGAGAAATA 57.469 33.333 0.00 0.00 0.00 1.40
2746 6647 9.817809 TCTTTTAGCGAGAGAAATATACAATGT 57.182 29.630 0.00 0.00 0.00 2.71
2747 6648 9.855361 CTTTTAGCGAGAGAAATATACAATGTG 57.145 33.333 0.00 0.00 0.00 3.21
2748 6649 9.594478 TTTTAGCGAGAGAAATATACAATGTGA 57.406 29.630 0.00 0.00 0.00 3.58
2749 6650 9.764363 TTTAGCGAGAGAAATATACAATGTGAT 57.236 29.630 0.00 0.00 0.00 3.06
2750 6651 9.764363 TTAGCGAGAGAAATATACAATGTGATT 57.236 29.630 0.00 0.00 0.00 2.57
2751 6652 8.304202 AGCGAGAGAAATATACAATGTGATTC 57.696 34.615 0.00 0.00 0.00 2.52
2752 6653 8.147058 AGCGAGAGAAATATACAATGTGATTCT 58.853 33.333 0.00 0.57 0.00 2.40
2753 6654 8.768955 GCGAGAGAAATATACAATGTGATTCTT 58.231 33.333 0.00 0.00 0.00 2.52
2763 6664 8.723942 ATACAATGTGATTCTTAGGACAACTC 57.276 34.615 0.00 0.00 0.00 3.01
2764 6665 6.773638 ACAATGTGATTCTTAGGACAACTCT 58.226 36.000 0.00 0.00 0.00 3.24
2765 6666 6.876257 ACAATGTGATTCTTAGGACAACTCTC 59.124 38.462 0.00 0.00 0.00 3.20
2766 6667 5.407407 TGTGATTCTTAGGACAACTCTCC 57.593 43.478 0.00 0.00 0.00 3.71
2767 6668 4.838423 TGTGATTCTTAGGACAACTCTCCA 59.162 41.667 0.00 0.00 31.94 3.86
2768 6669 5.306937 TGTGATTCTTAGGACAACTCTCCAA 59.693 40.000 0.00 0.00 31.94 3.53
2769 6670 5.639931 GTGATTCTTAGGACAACTCTCCAAC 59.360 44.000 0.00 0.00 31.94 3.77
2770 6671 5.306937 TGATTCTTAGGACAACTCTCCAACA 59.693 40.000 0.00 0.00 31.94 3.33
2771 6672 4.602340 TCTTAGGACAACTCTCCAACAC 57.398 45.455 0.00 0.00 31.94 3.32
2772 6673 4.223953 TCTTAGGACAACTCTCCAACACT 58.776 43.478 0.00 0.00 31.94 3.55
2773 6674 2.918712 AGGACAACTCTCCAACACTG 57.081 50.000 0.00 0.00 31.94 3.66
2774 6675 2.398588 AGGACAACTCTCCAACACTGA 58.601 47.619 0.00 0.00 31.94 3.41
2775 6676 2.103263 AGGACAACTCTCCAACACTGAC 59.897 50.000 0.00 0.00 31.94 3.51
2776 6677 2.484889 GACAACTCTCCAACACTGACC 58.515 52.381 0.00 0.00 0.00 4.02
2777 6678 2.103263 GACAACTCTCCAACACTGACCT 59.897 50.000 0.00 0.00 0.00 3.85
2778 6679 2.158900 ACAACTCTCCAACACTGACCTG 60.159 50.000 0.00 0.00 0.00 4.00
2779 6680 1.794714 ACTCTCCAACACTGACCTGT 58.205 50.000 0.00 0.00 0.00 4.00
2780 6681 2.958818 ACTCTCCAACACTGACCTGTA 58.041 47.619 0.00 0.00 0.00 2.74
2781 6682 3.305720 ACTCTCCAACACTGACCTGTAA 58.694 45.455 0.00 0.00 0.00 2.41
2782 6683 3.709653 ACTCTCCAACACTGACCTGTAAA 59.290 43.478 0.00 0.00 0.00 2.01
2783 6684 4.163458 ACTCTCCAACACTGACCTGTAAAA 59.837 41.667 0.00 0.00 0.00 1.52
2784 6685 5.163195 ACTCTCCAACACTGACCTGTAAAAT 60.163 40.000 0.00 0.00 0.00 1.82
2785 6686 6.042781 ACTCTCCAACACTGACCTGTAAAATA 59.957 38.462 0.00 0.00 0.00 1.40
2786 6687 6.464222 TCTCCAACACTGACCTGTAAAATAG 58.536 40.000 0.00 0.00 0.00 1.73
2787 6688 6.269077 TCTCCAACACTGACCTGTAAAATAGA 59.731 38.462 0.00 0.00 0.00 1.98
2788 6689 6.228258 TCCAACACTGACCTGTAAAATAGAC 58.772 40.000 0.00 0.00 0.00 2.59
2789 6690 5.995282 CCAACACTGACCTGTAAAATAGACA 59.005 40.000 0.00 0.00 0.00 3.41
2790 6691 6.073222 CCAACACTGACCTGTAAAATAGACAC 60.073 42.308 0.00 0.00 0.00 3.67
2791 6692 6.420913 ACACTGACCTGTAAAATAGACACT 57.579 37.500 0.00 0.00 0.00 3.55
2792 6693 6.223852 ACACTGACCTGTAAAATAGACACTG 58.776 40.000 0.00 0.00 0.00 3.66
2793 6694 5.120830 CACTGACCTGTAAAATAGACACTGC 59.879 44.000 0.00 0.00 0.00 4.40
2794 6695 5.221641 ACTGACCTGTAAAATAGACACTGCA 60.222 40.000 0.00 0.00 0.00 4.41
2795 6696 5.804639 TGACCTGTAAAATAGACACTGCAT 58.195 37.500 0.00 0.00 0.00 3.96
2796 6697 5.874810 TGACCTGTAAAATAGACACTGCATC 59.125 40.000 0.00 0.00 0.00 3.91
2797 6698 5.186198 ACCTGTAAAATAGACACTGCATCC 58.814 41.667 0.00 0.00 0.00 3.51
2798 6699 4.271049 CCTGTAAAATAGACACTGCATCCG 59.729 45.833 0.00 0.00 0.00 4.18
2799 6700 4.827692 TGTAAAATAGACACTGCATCCGT 58.172 39.130 0.00 0.00 0.00 4.69
2800 6701 4.868171 TGTAAAATAGACACTGCATCCGTC 59.132 41.667 0.00 0.00 0.00 4.79
2801 6702 2.604046 AATAGACACTGCATCCGTCC 57.396 50.000 6.66 0.00 0.00 4.79
2802 6703 0.385751 ATAGACACTGCATCCGTCCG 59.614 55.000 6.66 0.00 0.00 4.79
2803 6704 2.279502 TAGACACTGCATCCGTCCGC 62.280 60.000 6.66 0.00 0.00 5.54
2805 6706 4.794439 CACTGCATCCGTCCGCGA 62.794 66.667 8.23 0.00 41.33 5.87
2806 6707 4.063967 ACTGCATCCGTCCGCGAA 62.064 61.111 8.23 0.00 41.33 4.70
2807 6708 3.554692 CTGCATCCGTCCGCGAAC 61.555 66.667 8.23 0.00 41.33 3.95
2809 6710 4.814294 GCATCCGTCCGCGAACCT 62.814 66.667 8.23 0.00 41.33 3.50
2810 6711 2.885644 CATCCGTCCGCGAACCTG 60.886 66.667 8.23 0.00 41.33 4.00
2811 6712 4.143333 ATCCGTCCGCGAACCTGG 62.143 66.667 8.23 0.00 41.33 4.45
2813 6714 4.796231 CCGTCCGCGAACCTGGAG 62.796 72.222 8.23 0.00 41.33 3.86
2814 6715 4.796231 CGTCCGCGAACCTGGAGG 62.796 72.222 8.23 0.00 41.33 4.30
2815 6716 3.379445 GTCCGCGAACCTGGAGGA 61.379 66.667 8.23 0.00 38.94 3.71
2816 6717 3.379445 TCCGCGAACCTGGAGGAC 61.379 66.667 8.23 0.00 38.94 3.85
2817 6718 4.452733 CCGCGAACCTGGAGGACC 62.453 72.222 8.23 0.00 38.94 4.46
2818 6719 4.796231 CGCGAACCTGGAGGACCG 62.796 72.222 0.00 3.65 39.42 4.79
2819 6720 4.452733 GCGAACCTGGAGGACCGG 62.453 72.222 0.00 0.00 41.93 5.28
2820 6721 4.452733 CGAACCTGGAGGACCGGC 62.453 72.222 0.00 0.00 40.99 6.13
2821 6722 4.097361 GAACCTGGAGGACCGGCC 62.097 72.222 0.00 3.58 40.99 6.13
2839 6740 2.903357 CACGGATGTGGGAGGAGG 59.097 66.667 0.00 0.00 42.59 4.30
2840 6741 1.990060 CACGGATGTGGGAGGAGGT 60.990 63.158 0.00 0.00 42.59 3.85
2841 6742 1.686110 ACGGATGTGGGAGGAGGTC 60.686 63.158 0.00 0.00 0.00 3.85
2842 6743 1.685765 CGGATGTGGGAGGAGGTCA 60.686 63.158 0.00 0.00 0.00 4.02
2843 6744 1.050988 CGGATGTGGGAGGAGGTCAT 61.051 60.000 0.00 0.00 0.00 3.06
2844 6745 0.471617 GGATGTGGGAGGAGGTCATG 59.528 60.000 0.00 0.00 0.00 3.07
2849 6750 0.413434 TGGGAGGAGGTCATGTCTGA 59.587 55.000 0.00 0.00 0.00 3.27
2858 6759 4.201990 GGAGGTCATGTCTGATTGCATTTC 60.202 45.833 0.00 0.00 32.98 2.17
2908 6809 9.586435 CAAATTTGAGGGATATTTAGACAAACC 57.414 33.333 13.08 0.00 0.00 3.27
2910 6811 5.031066 TGAGGGATATTTAGACAAACCGG 57.969 43.478 0.00 0.00 0.00 5.28
2913 6814 3.805971 GGGATATTTAGACAAACCGGACG 59.194 47.826 9.46 0.00 0.00 4.79
2914 6815 4.441913 GGGATATTTAGACAAACCGGACGA 60.442 45.833 9.46 0.00 0.00 4.20
2915 6816 4.505556 GGATATTTAGACAAACCGGACGAC 59.494 45.833 9.46 0.00 0.00 4.34
2916 6817 2.886862 TTTAGACAAACCGGACGACA 57.113 45.000 9.46 0.00 0.00 4.35
2917 6818 3.389925 TTTAGACAAACCGGACGACAT 57.610 42.857 9.46 0.00 0.00 3.06
2918 6819 3.389925 TTAGACAAACCGGACGACATT 57.610 42.857 9.46 0.00 0.00 2.71
2919 6820 4.517952 TTAGACAAACCGGACGACATTA 57.482 40.909 9.46 0.00 0.00 1.90
2920 6821 3.389925 AGACAAACCGGACGACATTAA 57.610 42.857 9.46 0.00 0.00 1.40
2921 6822 3.934068 AGACAAACCGGACGACATTAAT 58.066 40.909 9.46 0.00 0.00 1.40
2922 6823 4.320870 AGACAAACCGGACGACATTAATT 58.679 39.130 9.46 0.00 0.00 1.40
2923 6824 4.390909 AGACAAACCGGACGACATTAATTC 59.609 41.667 9.46 0.00 0.00 2.17
2924 6825 4.066490 ACAAACCGGACGACATTAATTCA 58.934 39.130 9.46 0.00 0.00 2.57
2925 6826 4.698304 ACAAACCGGACGACATTAATTCAT 59.302 37.500 9.46 0.00 0.00 2.57
2926 6827 5.875910 ACAAACCGGACGACATTAATTCATA 59.124 36.000 9.46 0.00 0.00 2.15
2927 6828 5.978934 AACCGGACGACATTAATTCATAC 57.021 39.130 9.46 0.00 0.00 2.39
2928 6829 5.272283 ACCGGACGACATTAATTCATACT 57.728 39.130 9.46 0.00 0.00 2.12
2929 6830 5.667466 ACCGGACGACATTAATTCATACTT 58.333 37.500 9.46 0.00 0.00 2.24
2930 6831 5.522460 ACCGGACGACATTAATTCATACTTG 59.478 40.000 9.46 0.00 0.00 3.16
2931 6832 5.050363 CCGGACGACATTAATTCATACTTGG 60.050 44.000 0.00 0.00 0.00 3.61
2932 6833 5.751509 CGGACGACATTAATTCATACTTGGA 59.248 40.000 0.00 0.00 0.00 3.53
2933 6834 6.423905 CGGACGACATTAATTCATACTTGGAT 59.576 38.462 0.00 0.00 0.00 3.41
2934 6835 7.597369 CGGACGACATTAATTCATACTTGGATA 59.403 37.037 0.00 0.00 0.00 2.59
2935 6836 9.268268 GGACGACATTAATTCATACTTGGATAA 57.732 33.333 0.00 0.00 0.00 1.75
2937 6838 9.832445 ACGACATTAATTCATACTTGGATAACT 57.168 29.630 0.00 0.00 0.00 2.24
2992 6893 8.237811 AGATAAAACCTGTTGTGTTTCATCTT 57.762 30.769 0.00 0.00 37.38 2.40
3003 6904 4.141505 TGTGTTTCATCTTGACTGGAGGAA 60.142 41.667 0.00 0.00 32.80 3.36
3006 6907 4.705110 TTCATCTTGACTGGAGGAAACA 57.295 40.909 0.00 0.00 31.93 2.83
3009 6910 4.821805 TCATCTTGACTGGAGGAAACAAAC 59.178 41.667 0.00 0.00 0.00 2.93
3062 6963 9.968870 CATACTCTAAACCTAGTCTAAATGACC 57.031 37.037 0.00 0.00 46.46 4.02
3067 6968 3.614092 ACCTAGTCTAAATGACCGTCGA 58.386 45.455 0.00 0.00 46.46 4.20
3069 6970 2.539346 AGTCTAAATGACCGTCGACG 57.461 50.000 30.33 30.33 46.46 5.12
3071 6972 0.806868 TCTAAATGACCGTCGACGCT 59.193 50.000 31.73 19.80 38.18 5.07
3074 6975 2.467946 AAATGACCGTCGACGCTCGT 62.468 55.000 31.73 25.19 41.35 4.18
3076 6977 2.428071 GACCGTCGACGCTCGTTT 60.428 61.111 31.73 10.89 41.35 3.60
3086 6987 0.039527 ACGCTCGTTTGCCCATTTTC 60.040 50.000 0.00 0.00 0.00 2.29
3114 7015 0.984230 ATGAGCCTCGGGAACTGAAA 59.016 50.000 0.00 0.00 46.55 2.69
3118 7019 0.321996 GCCTCGGGAACTGAAACTCT 59.678 55.000 0.00 0.00 46.55 3.24
3120 7021 2.028385 GCCTCGGGAACTGAAACTCTAA 60.028 50.000 0.00 0.00 46.55 2.10
3123 7024 4.487019 CTCGGGAACTGAAACTCTAACTC 58.513 47.826 0.00 0.00 46.55 3.01
3125 7026 3.006537 CGGGAACTGAAACTCTAACTCCA 59.993 47.826 0.00 0.00 36.31 3.86
3133 7034 6.097915 TGAAACTCTAACTCCACCTTGTAG 57.902 41.667 0.00 0.00 0.00 2.74
3138 7039 0.984995 AACTCCACCTTGTAGCCTCC 59.015 55.000 0.00 0.00 0.00 4.30
3143 7044 2.359967 ACCTTGTAGCCTCCGCCTC 61.360 63.158 0.00 0.00 34.57 4.70
3144 7045 2.359169 CCTTGTAGCCTCCGCCTCA 61.359 63.158 0.00 0.00 34.57 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.314393 GCTAACTAACTACAGAGCAGTTAACT 58.686 38.462 1.12 1.12 37.87 2.24
3 4 5.413833 ACGCTAACTAACTACAGAGCAGTTA 59.586 40.000 0.00 0.00 37.42 2.24
5 6 3.757493 ACGCTAACTAACTACAGAGCAGT 59.243 43.478 0.00 0.00 0.00 4.40
6 7 4.099120 CACGCTAACTAACTACAGAGCAG 58.901 47.826 0.00 0.00 0.00 4.24
7 8 3.504906 ACACGCTAACTAACTACAGAGCA 59.495 43.478 0.00 0.00 0.00 4.26
8 9 4.094090 ACACGCTAACTAACTACAGAGC 57.906 45.455 0.00 0.00 0.00 4.09
9 10 5.106634 ACTGACACGCTAACTAACTACAGAG 60.107 44.000 0.00 0.00 0.00 3.35
10 11 4.758674 ACTGACACGCTAACTAACTACAGA 59.241 41.667 0.00 0.00 0.00 3.41
11 12 4.852104 CACTGACACGCTAACTAACTACAG 59.148 45.833 0.00 0.00 0.00 2.74
12 13 4.276678 ACACTGACACGCTAACTAACTACA 59.723 41.667 0.00 0.00 0.00 2.74
13 14 4.791974 ACACTGACACGCTAACTAACTAC 58.208 43.478 0.00 0.00 0.00 2.73
14 15 5.443185 AACACTGACACGCTAACTAACTA 57.557 39.130 0.00 0.00 0.00 2.24
15 16 4.296690 GAACACTGACACGCTAACTAACT 58.703 43.478 0.00 0.00 0.00 2.24
16 17 3.119136 CGAACACTGACACGCTAACTAAC 59.881 47.826 0.00 0.00 0.00 2.34
17 18 3.003585 TCGAACACTGACACGCTAACTAA 59.996 43.478 0.00 0.00 0.00 2.24
18 19 2.549329 TCGAACACTGACACGCTAACTA 59.451 45.455 0.00 0.00 0.00 2.24
19 20 1.335810 TCGAACACTGACACGCTAACT 59.664 47.619 0.00 0.00 0.00 2.24
20 21 1.762419 TCGAACACTGACACGCTAAC 58.238 50.000 0.00 0.00 0.00 2.34
21 22 2.717580 ATCGAACACTGACACGCTAA 57.282 45.000 0.00 0.00 0.00 3.09
22 23 2.287970 ACAATCGAACACTGACACGCTA 60.288 45.455 0.00 0.00 0.00 4.26
23 24 1.139989 CAATCGAACACTGACACGCT 58.860 50.000 0.00 0.00 0.00 5.07
24 25 0.859232 ACAATCGAACACTGACACGC 59.141 50.000 0.00 0.00 0.00 5.34
25 26 1.858458 ACACAATCGAACACTGACACG 59.142 47.619 0.00 0.00 0.00 4.49
26 27 3.944422 AACACAATCGAACACTGACAC 57.056 42.857 0.00 0.00 0.00 3.67
27 28 4.955925 AAAACACAATCGAACACTGACA 57.044 36.364 0.00 0.00 0.00 3.58
28 29 5.007332 AGGTAAAACACAATCGAACACTGAC 59.993 40.000 0.00 0.00 0.00 3.51
29 30 5.120399 AGGTAAAACACAATCGAACACTGA 58.880 37.500 0.00 0.00 0.00 3.41
30 31 5.418310 AGGTAAAACACAATCGAACACTG 57.582 39.130 0.00 0.00 0.00 3.66
31 32 4.514066 GGAGGTAAAACACAATCGAACACT 59.486 41.667 0.00 0.00 0.00 3.55
32 33 4.319984 GGGAGGTAAAACACAATCGAACAC 60.320 45.833 0.00 0.00 0.00 3.32
33 34 3.816523 GGGAGGTAAAACACAATCGAACA 59.183 43.478 0.00 0.00 0.00 3.18
34 35 3.189910 GGGGAGGTAAAACACAATCGAAC 59.810 47.826 0.00 0.00 0.00 3.95
35 36 3.073356 AGGGGAGGTAAAACACAATCGAA 59.927 43.478 0.00 0.00 0.00 3.71
36 37 2.640826 AGGGGAGGTAAAACACAATCGA 59.359 45.455 0.00 0.00 0.00 3.59
37 38 2.747446 CAGGGGAGGTAAAACACAATCG 59.253 50.000 0.00 0.00 0.00 3.34
38 39 2.492088 GCAGGGGAGGTAAAACACAATC 59.508 50.000 0.00 0.00 0.00 2.67
39 40 2.525368 GCAGGGGAGGTAAAACACAAT 58.475 47.619 0.00 0.00 0.00 2.71
40 41 1.816183 CGCAGGGGAGGTAAAACACAA 60.816 52.381 0.00 0.00 0.00 3.33
41 42 0.250553 CGCAGGGGAGGTAAAACACA 60.251 55.000 0.00 0.00 0.00 3.72
42 43 0.250597 ACGCAGGGGAGGTAAAACAC 60.251 55.000 0.00 0.00 0.00 3.32
43 44 0.475044 AACGCAGGGGAGGTAAAACA 59.525 50.000 0.00 0.00 0.00 2.83
44 45 0.879090 CAACGCAGGGGAGGTAAAAC 59.121 55.000 0.00 0.00 0.00 2.43
45 46 0.250989 CCAACGCAGGGGAGGTAAAA 60.251 55.000 0.00 0.00 0.00 1.52
46 47 1.377229 CCAACGCAGGGGAGGTAAA 59.623 57.895 0.00 0.00 0.00 2.01
47 48 1.420532 AACCAACGCAGGGGAGGTAA 61.421 55.000 3.91 0.00 31.10 2.85
48 49 1.420532 AAACCAACGCAGGGGAGGTA 61.421 55.000 3.91 0.00 31.10 3.08
49 50 2.692273 GAAACCAACGCAGGGGAGGT 62.692 60.000 0.00 0.00 0.00 3.85
50 51 1.971695 GAAACCAACGCAGGGGAGG 60.972 63.158 0.00 0.00 0.00 4.30
51 52 1.971695 GGAAACCAACGCAGGGGAG 60.972 63.158 0.00 0.00 0.00 4.30
52 53 2.002018 AAGGAAACCAACGCAGGGGA 62.002 55.000 0.00 0.00 0.00 4.81
53 54 0.250989 TAAGGAAACCAACGCAGGGG 60.251 55.000 0.00 0.00 0.00 4.79
54 55 0.879090 GTAAGGAAACCAACGCAGGG 59.121 55.000 0.00 0.00 0.00 4.45
55 56 0.879090 GGTAAGGAAACCAACGCAGG 59.121 55.000 0.00 0.00 39.50 4.85
56 57 1.600023 TGGTAAGGAAACCAACGCAG 58.400 50.000 0.00 0.00 46.55 5.18
57 58 3.802862 TGGTAAGGAAACCAACGCA 57.197 47.368 0.00 0.00 46.55 5.24
63 64 1.279846 TGTCCGGATGGTAAGGAAACC 59.720 52.381 7.81 0.00 40.19 3.27
64 65 2.027469 ACTGTCCGGATGGTAAGGAAAC 60.027 50.000 7.81 0.00 35.60 2.78
65 66 2.262637 ACTGTCCGGATGGTAAGGAAA 58.737 47.619 7.81 0.00 35.60 3.13
66 67 1.946984 ACTGTCCGGATGGTAAGGAA 58.053 50.000 7.81 0.00 35.60 3.36
67 68 1.946984 AACTGTCCGGATGGTAAGGA 58.053 50.000 7.81 0.00 36.30 3.36
68 69 2.027561 TCAAACTGTCCGGATGGTAAGG 60.028 50.000 7.81 3.53 36.30 2.69
69 70 3.262420 CTCAAACTGTCCGGATGGTAAG 58.738 50.000 7.81 3.42 36.30 2.34
70 71 2.614481 GCTCAAACTGTCCGGATGGTAA 60.614 50.000 7.81 0.00 36.30 2.85
71 72 1.066430 GCTCAAACTGTCCGGATGGTA 60.066 52.381 7.81 0.00 36.30 3.25
72 73 0.321653 GCTCAAACTGTCCGGATGGT 60.322 55.000 7.81 6.97 36.30 3.55
73 74 0.036010 AGCTCAAACTGTCCGGATGG 60.036 55.000 7.81 6.22 0.00 3.51
74 75 1.081892 CAGCTCAAACTGTCCGGATG 58.918 55.000 7.81 6.66 32.78 3.51
75 76 3.540211 CAGCTCAAACTGTCCGGAT 57.460 52.632 7.81 0.00 32.78 4.18
82 83 3.930336 TGGAGTATGACAGCTCAAACTG 58.070 45.455 10.69 0.00 43.59 3.16
83 84 3.834813 TCTGGAGTATGACAGCTCAAACT 59.165 43.478 10.69 0.00 34.76 2.66
84 85 4.193826 TCTGGAGTATGACAGCTCAAAC 57.806 45.455 10.69 0.00 34.76 2.93
85 86 4.890158 TTCTGGAGTATGACAGCTCAAA 57.110 40.909 10.69 1.87 34.76 2.69
86 87 4.323028 CCTTTCTGGAGTATGACAGCTCAA 60.323 45.833 10.69 0.87 38.35 3.02
87 88 3.196469 CCTTTCTGGAGTATGACAGCTCA 59.804 47.826 10.69 0.00 38.35 4.26
88 89 3.449018 TCCTTTCTGGAGTATGACAGCTC 59.551 47.826 0.00 2.23 40.56 4.09
89 90 3.445008 TCCTTTCTGGAGTATGACAGCT 58.555 45.455 0.00 0.00 40.56 4.24
90 91 3.895232 TCCTTTCTGGAGTATGACAGC 57.105 47.619 0.00 0.00 40.56 4.40
137 138 6.887545 TCCTTTCTGGACTGTAGTTTCAAAAA 59.112 34.615 0.00 0.00 40.56 1.94
138 139 6.419791 TCCTTTCTGGACTGTAGTTTCAAAA 58.580 36.000 0.00 0.00 40.56 2.44
139 140 5.996644 TCCTTTCTGGACTGTAGTTTCAAA 58.003 37.500 0.00 0.00 40.56 2.69
140 141 5.623956 TCCTTTCTGGACTGTAGTTTCAA 57.376 39.130 0.00 0.00 40.56 2.69
141 142 5.130477 AGTTCCTTTCTGGACTGTAGTTTCA 59.870 40.000 0.00 0.00 46.14 2.69
142 143 5.612351 AGTTCCTTTCTGGACTGTAGTTTC 58.388 41.667 0.00 0.00 46.14 2.78
143 144 5.454897 GGAGTTCCTTTCTGGACTGTAGTTT 60.455 44.000 0.00 0.00 46.14 2.66
144 145 4.040584 GGAGTTCCTTTCTGGACTGTAGTT 59.959 45.833 0.00 0.00 46.14 2.24
145 146 3.579151 GGAGTTCCTTTCTGGACTGTAGT 59.421 47.826 0.00 0.00 46.14 2.73
146 147 3.055747 GGGAGTTCCTTTCTGGACTGTAG 60.056 52.174 0.00 0.00 46.14 2.74
147 148 2.904434 GGGAGTTCCTTTCTGGACTGTA 59.096 50.000 0.00 0.00 46.14 2.74
148 149 1.700186 GGGAGTTCCTTTCTGGACTGT 59.300 52.381 0.00 0.00 46.14 3.55
149 150 1.981495 AGGGAGTTCCTTTCTGGACTG 59.019 52.381 0.00 0.00 45.47 3.51
150 151 2.424684 AGGGAGTTCCTTTCTGGACT 57.575 50.000 0.00 0.00 45.47 3.85
151 152 2.236644 GGTAGGGAGTTCCTTTCTGGAC 59.763 54.545 0.00 0.00 45.47 4.02
152 153 2.547990 GGTAGGGAGTTCCTTTCTGGA 58.452 52.381 0.00 0.00 45.47 3.86
153 154 1.207329 CGGTAGGGAGTTCCTTTCTGG 59.793 57.143 0.00 0.00 45.47 3.86
154 155 1.900486 ACGGTAGGGAGTTCCTTTCTG 59.100 52.381 0.00 0.00 45.47 3.02
155 156 2.322339 ACGGTAGGGAGTTCCTTTCT 57.678 50.000 0.00 0.00 45.47 2.52
156 157 2.827921 TGTACGGTAGGGAGTTCCTTTC 59.172 50.000 0.00 0.00 45.47 2.62
157 158 2.893424 TGTACGGTAGGGAGTTCCTTT 58.107 47.619 0.00 0.00 45.47 3.11
158 159 2.610438 TGTACGGTAGGGAGTTCCTT 57.390 50.000 0.00 0.00 45.47 3.36
160 161 2.762327 TGATTGTACGGTAGGGAGTTCC 59.238 50.000 0.00 0.00 0.00 3.62
161 162 4.081807 ACTTGATTGTACGGTAGGGAGTTC 60.082 45.833 0.00 0.00 0.00 3.01
162 163 3.836562 ACTTGATTGTACGGTAGGGAGTT 59.163 43.478 0.00 0.00 0.00 3.01
163 164 3.194968 CACTTGATTGTACGGTAGGGAGT 59.805 47.826 0.00 0.00 0.00 3.85
164 165 3.430374 CCACTTGATTGTACGGTAGGGAG 60.430 52.174 0.00 0.00 0.00 4.30
165 166 2.498481 CCACTTGATTGTACGGTAGGGA 59.502 50.000 0.00 0.00 0.00 4.20
166 167 2.901249 CCACTTGATTGTACGGTAGGG 58.099 52.381 0.00 0.00 0.00 3.53
167 168 2.277084 GCCACTTGATTGTACGGTAGG 58.723 52.381 0.00 0.00 0.00 3.18
168 169 2.967362 TGCCACTTGATTGTACGGTAG 58.033 47.619 0.00 0.00 0.00 3.18
169 170 3.404224 TTGCCACTTGATTGTACGGTA 57.596 42.857 0.00 0.00 0.00 4.02
170 171 2.264005 TTGCCACTTGATTGTACGGT 57.736 45.000 0.00 0.00 0.00 4.83
171 172 3.242284 CGTATTGCCACTTGATTGTACGG 60.242 47.826 0.00 0.00 32.48 4.02
172 173 3.615056 TCGTATTGCCACTTGATTGTACG 59.385 43.478 0.00 0.00 36.11 3.67
173 174 4.390603 TGTCGTATTGCCACTTGATTGTAC 59.609 41.667 0.00 0.00 0.00 2.90
174 175 4.570930 TGTCGTATTGCCACTTGATTGTA 58.429 39.130 0.00 0.00 0.00 2.41
175 176 3.407698 TGTCGTATTGCCACTTGATTGT 58.592 40.909 0.00 0.00 0.00 2.71
176 177 4.621068 ATGTCGTATTGCCACTTGATTG 57.379 40.909 0.00 0.00 0.00 2.67
177 178 5.428253 AGTATGTCGTATTGCCACTTGATT 58.572 37.500 0.00 0.00 0.00 2.57
178 179 5.023533 AGTATGTCGTATTGCCACTTGAT 57.976 39.130 0.00 0.00 0.00 2.57
179 180 4.465632 AGTATGTCGTATTGCCACTTGA 57.534 40.909 0.00 0.00 0.00 3.02
180 181 5.121611 TGAAAGTATGTCGTATTGCCACTTG 59.878 40.000 0.00 0.00 0.00 3.16
181 182 5.242434 TGAAAGTATGTCGTATTGCCACTT 58.758 37.500 0.00 0.00 0.00 3.16
182 183 4.827692 TGAAAGTATGTCGTATTGCCACT 58.172 39.130 0.00 0.00 0.00 4.00
183 184 5.321516 GTTGAAAGTATGTCGTATTGCCAC 58.678 41.667 0.00 0.00 0.00 5.01
184 185 4.092237 CGTTGAAAGTATGTCGTATTGCCA 59.908 41.667 0.00 0.00 0.00 4.92
185 186 4.493545 CCGTTGAAAGTATGTCGTATTGCC 60.494 45.833 0.00 0.00 0.00 4.52
186 187 4.327898 TCCGTTGAAAGTATGTCGTATTGC 59.672 41.667 0.00 0.00 0.00 3.56
187 188 5.498069 CGTCCGTTGAAAGTATGTCGTATTG 60.498 44.000 0.00 0.00 0.00 1.90
188 189 4.560035 CGTCCGTTGAAAGTATGTCGTATT 59.440 41.667 0.00 0.00 0.00 1.89
189 190 4.100529 CGTCCGTTGAAAGTATGTCGTAT 58.899 43.478 0.00 0.00 0.00 3.06
190 191 3.491356 CGTCCGTTGAAAGTATGTCGTA 58.509 45.455 0.00 0.00 0.00 3.43
191 192 2.322161 CGTCCGTTGAAAGTATGTCGT 58.678 47.619 0.00 0.00 0.00 4.34
192 193 1.058695 GCGTCCGTTGAAAGTATGTCG 59.941 52.381 0.00 0.00 0.00 4.35
193 194 2.063266 TGCGTCCGTTGAAAGTATGTC 58.937 47.619 0.00 0.00 0.00 3.06
194 195 2.157834 TGCGTCCGTTGAAAGTATGT 57.842 45.000 0.00 0.00 0.00 2.29
195 196 2.787723 GCATGCGTCCGTTGAAAGTATG 60.788 50.000 0.00 0.00 31.45 2.39
196 197 1.396996 GCATGCGTCCGTTGAAAGTAT 59.603 47.619 0.00 0.00 0.00 2.12
197 198 0.793861 GCATGCGTCCGTTGAAAGTA 59.206 50.000 0.00 0.00 0.00 2.24
198 199 1.163420 TGCATGCGTCCGTTGAAAGT 61.163 50.000 14.09 0.00 0.00 2.66
199 200 0.725784 GTGCATGCGTCCGTTGAAAG 60.726 55.000 14.09 0.00 0.00 2.62
200 201 1.281353 GTGCATGCGTCCGTTGAAA 59.719 52.632 14.09 0.00 0.00 2.69
201 202 1.889573 TGTGCATGCGTCCGTTGAA 60.890 52.632 14.09 0.00 0.00 2.69
202 203 2.280457 TGTGCATGCGTCCGTTGA 60.280 55.556 14.09 0.00 0.00 3.18
203 204 2.127270 GTGTGCATGCGTCCGTTG 60.127 61.111 14.09 0.00 0.00 4.10
204 205 2.590291 TGTGTGCATGCGTCCGTT 60.590 55.556 14.09 0.00 0.00 4.44
205 206 2.428960 TACTGTGTGCATGCGTCCGT 62.429 55.000 14.09 10.40 0.00 4.69
206 207 1.288419 TTACTGTGTGCATGCGTCCG 61.288 55.000 14.09 4.97 0.00 4.79
207 208 0.165944 GTTACTGTGTGCATGCGTCC 59.834 55.000 14.09 3.96 0.00 4.79
208 209 1.136252 CAGTTACTGTGTGCATGCGTC 60.136 52.381 14.09 9.43 0.00 5.19
209 210 0.867746 CAGTTACTGTGTGCATGCGT 59.132 50.000 14.09 6.81 0.00 5.24
210 211 0.166597 CCAGTTACTGTGTGCATGCG 59.833 55.000 14.09 0.00 0.00 4.73
211 212 1.466167 CTCCAGTTACTGTGTGCATGC 59.534 52.381 11.82 11.82 0.00 4.06
212 213 1.466167 GCTCCAGTTACTGTGTGCATG 59.534 52.381 11.68 0.00 0.00 4.06
213 214 1.072173 TGCTCCAGTTACTGTGTGCAT 59.928 47.619 18.91 0.00 31.66 3.96
214 215 0.467804 TGCTCCAGTTACTGTGTGCA 59.532 50.000 18.91 18.91 32.96 4.57
215 216 1.151668 CTGCTCCAGTTACTGTGTGC 58.848 55.000 11.68 14.10 0.00 4.57
216 217 2.802816 GTTCTGCTCCAGTTACTGTGTG 59.197 50.000 11.68 5.32 32.61 3.82
217 218 2.700897 AGTTCTGCTCCAGTTACTGTGT 59.299 45.455 11.68 0.00 30.89 3.72
218 219 3.062763 CAGTTCTGCTCCAGTTACTGTG 58.937 50.000 11.68 5.07 38.74 3.66
219 220 2.965831 TCAGTTCTGCTCCAGTTACTGT 59.034 45.455 11.68 0.00 41.26 3.55
220 221 3.667497 TCAGTTCTGCTCCAGTTACTG 57.333 47.619 5.22 5.22 41.53 2.74
221 222 4.101741 AGTTTCAGTTCTGCTCCAGTTACT 59.898 41.667 0.00 0.00 32.61 2.24
222 223 4.212214 CAGTTTCAGTTCTGCTCCAGTTAC 59.788 45.833 0.00 0.00 32.61 2.50
223 224 4.100963 TCAGTTTCAGTTCTGCTCCAGTTA 59.899 41.667 0.00 0.00 32.61 2.24
224 225 3.118261 TCAGTTTCAGTTCTGCTCCAGTT 60.118 43.478 0.00 0.00 32.61 3.16
225 226 2.435805 TCAGTTTCAGTTCTGCTCCAGT 59.564 45.455 0.00 0.00 32.61 4.00
226 227 3.117491 TCAGTTTCAGTTCTGCTCCAG 57.883 47.619 0.00 0.00 0.00 3.86
227 228 3.470709 CTTCAGTTTCAGTTCTGCTCCA 58.529 45.455 0.00 0.00 0.00 3.86
228 229 2.225255 GCTTCAGTTTCAGTTCTGCTCC 59.775 50.000 0.00 0.00 0.00 4.70
229 230 2.874701 TGCTTCAGTTTCAGTTCTGCTC 59.125 45.455 0.00 0.00 0.00 4.26
230 231 2.615912 GTGCTTCAGTTTCAGTTCTGCT 59.384 45.455 0.00 0.00 0.00 4.24
231 232 2.355756 TGTGCTTCAGTTTCAGTTCTGC 59.644 45.455 0.00 0.00 0.00 4.26
232 233 4.274214 TCATGTGCTTCAGTTTCAGTTCTG 59.726 41.667 0.00 0.00 0.00 3.02
233 234 4.454678 TCATGTGCTTCAGTTTCAGTTCT 58.545 39.130 0.00 0.00 0.00 3.01
234 235 4.512944 TCTCATGTGCTTCAGTTTCAGTTC 59.487 41.667 0.00 0.00 0.00 3.01
235 236 4.454678 TCTCATGTGCTTCAGTTTCAGTT 58.545 39.130 0.00 0.00 0.00 3.16
236 237 4.077300 TCTCATGTGCTTCAGTTTCAGT 57.923 40.909 0.00 0.00 0.00 3.41
237 238 5.008415 AGTTTCTCATGTGCTTCAGTTTCAG 59.992 40.000 0.00 0.00 0.00 3.02
238 239 4.883585 AGTTTCTCATGTGCTTCAGTTTCA 59.116 37.500 0.00 0.00 0.00 2.69
239 240 5.429957 AGTTTCTCATGTGCTTCAGTTTC 57.570 39.130 0.00 0.00 0.00 2.78
240 241 5.841957 AAGTTTCTCATGTGCTTCAGTTT 57.158 34.783 0.00 0.00 0.00 2.66
241 242 5.049129 GCTAAGTTTCTCATGTGCTTCAGTT 60.049 40.000 0.00 0.00 0.00 3.16
242 243 4.453819 GCTAAGTTTCTCATGTGCTTCAGT 59.546 41.667 0.00 0.00 0.00 3.41
243 244 4.694509 AGCTAAGTTTCTCATGTGCTTCAG 59.305 41.667 0.00 0.00 0.00 3.02
244 245 4.453478 CAGCTAAGTTTCTCATGTGCTTCA 59.547 41.667 0.00 0.00 0.00 3.02
245 246 4.692625 TCAGCTAAGTTTCTCATGTGCTTC 59.307 41.667 0.00 0.00 0.00 3.86
246 247 4.645535 TCAGCTAAGTTTCTCATGTGCTT 58.354 39.130 0.00 0.00 0.00 3.91
247 248 4.277515 TCAGCTAAGTTTCTCATGTGCT 57.722 40.909 0.00 0.00 0.00 4.40
248 249 5.049129 AGTTTCAGCTAAGTTTCTCATGTGC 60.049 40.000 0.00 0.00 0.00 4.57
249 250 6.203530 TCAGTTTCAGCTAAGTTTCTCATGTG 59.796 38.462 0.00 0.00 0.00 3.21
250 251 6.291377 TCAGTTTCAGCTAAGTTTCTCATGT 58.709 36.000 0.00 0.00 0.00 3.21
251 252 6.791887 TCAGTTTCAGCTAAGTTTCTCATG 57.208 37.500 0.00 0.00 0.00 3.07
252 253 7.500559 AGTTTCAGTTTCAGCTAAGTTTCTCAT 59.499 33.333 0.00 0.00 0.00 2.90
253 254 6.823689 AGTTTCAGTTTCAGCTAAGTTTCTCA 59.176 34.615 0.00 0.00 0.00 3.27
254 255 7.011482 TGAGTTTCAGTTTCAGCTAAGTTTCTC 59.989 37.037 0.00 0.00 0.00 2.87
255 256 6.823689 TGAGTTTCAGTTTCAGCTAAGTTTCT 59.176 34.615 0.00 0.00 0.00 2.52
256 257 7.016361 TGAGTTTCAGTTTCAGCTAAGTTTC 57.984 36.000 0.00 0.00 0.00 2.78
319 320 0.108207 ATGTGCTCCAGCTCTATGCC 59.892 55.000 0.00 0.00 44.23 4.40
376 377 5.416271 TCTTAAATCTGAGCCGGTTAACT 57.584 39.130 1.90 0.00 0.00 2.24
418 427 8.570038 TGTACAGTAATAAATATTCCCCCTCA 57.430 34.615 0.00 0.00 0.00 3.86
419 428 9.449719 CATGTACAGTAATAAATATTCCCCCTC 57.550 37.037 0.33 0.00 0.00 4.30
420 429 9.177927 TCATGTACAGTAATAAATATTCCCCCT 57.822 33.333 0.33 0.00 0.00 4.79
475 484 4.163552 TGATCGAATCGTGTACAACAGAC 58.836 43.478 1.52 0.00 0.00 3.51
540 549 7.119605 TCAAATTGTGCATCAAAGTTTATGC 57.880 32.000 16.60 16.60 46.92 3.14
544 553 5.761234 AGCATCAAATTGTGCATCAAAGTTT 59.239 32.000 17.77 1.88 43.63 2.66
550 559 4.729227 ATCAGCATCAAATTGTGCATCA 57.271 36.364 17.77 6.16 43.63 3.07
551 560 8.981724 ATTATATCAGCATCAAATTGTGCATC 57.018 30.769 17.77 0.00 43.63 3.91
552 561 8.581578 TGATTATATCAGCATCAAATTGTGCAT 58.418 29.630 17.77 9.43 43.63 3.96
553 562 7.863877 GTGATTATATCAGCATCAAATTGTGCA 59.136 33.333 17.77 0.00 43.63 4.57
554 563 8.224169 GTGATTATATCAGCATCAAATTGTGC 57.776 34.615 10.90 10.90 40.53 4.57
579 588 7.202047 GGCCTATGGACTCCTCTATTTATATGG 60.202 44.444 0.00 0.00 0.00 2.74
600 613 2.584835 AATTTGCTGTGACTGGCCTA 57.415 45.000 3.32 0.00 0.00 3.93
607 620 8.579682 AAGAAGATTGTTTAATTTGCTGTGAC 57.420 30.769 0.00 0.00 0.00 3.67
633 646 4.554363 CTGCGGGGAGTCGTAGCG 62.554 72.222 0.00 0.00 36.24 4.26
668 686 4.080186 ACATGATCTGGACATGGTTCATCA 60.080 41.667 0.00 0.00 46.19 3.07
696 717 3.151710 TCCGGTAGGACCATGCGG 61.152 66.667 0.00 0.00 42.75 5.69
743 770 2.202756 GCGTGAGGTCGATGGTCC 60.203 66.667 0.00 0.00 0.00 4.46
778 805 0.034337 TGGTTGTACTCCAAGGCGAC 59.966 55.000 7.67 0.00 32.51 5.19
808 835 4.048470 GGGAGGGTTGGGCAGGAC 62.048 72.222 0.00 0.00 0.00 3.85
832 859 0.250513 CCCCGTCCTTCTCCTTCTTG 59.749 60.000 0.00 0.00 0.00 3.02
941 978 2.759973 CGTCAGCCTAGCTCCCCA 60.760 66.667 0.00 0.00 36.40 4.96
1449 1569 4.201763 GCTTTGAGCTTCTTTACCATCTCG 60.202 45.833 0.00 0.00 38.45 4.04
1506 1638 2.756400 GAGATGGTGGTGGTGCCA 59.244 61.111 0.00 0.00 46.95 4.92
1552 1687 4.077184 GGTCACCGCGATCCACCA 62.077 66.667 8.23 0.00 0.00 4.17
1553 1688 4.832608 GGGTCACCGCGATCCACC 62.833 72.222 8.23 7.87 45.36 4.61
1736 1882 1.287730 CGCTCTGTTCAGCAGTGACC 61.288 60.000 0.00 0.00 45.23 4.02
1740 1886 1.301244 CACCGCTCTGTTCAGCAGT 60.301 57.895 0.00 0.00 45.23 4.40
1935 5724 2.745884 CCGCCCATCTTGTTCGCA 60.746 61.111 0.00 0.00 0.00 5.10
1979 5768 4.473520 CCATGCTTCCTCCGCCGT 62.474 66.667 0.00 0.00 0.00 5.68
1989 5778 3.011517 ACCCCGAGAGCCATGCTT 61.012 61.111 0.00 0.00 39.88 3.91
2087 5876 3.080274 CATGCGCGTCGACAATCA 58.920 55.556 17.16 9.57 0.00 2.57
2183 6045 2.763651 ACGATAGGGCGTTTCAAGC 58.236 52.632 0.00 0.00 42.71 4.01
2191 6053 1.135527 TGTCTACCAAACGATAGGGCG 59.864 52.381 0.00 0.00 43.77 6.13
2193 6055 4.730949 TCTTGTCTACCAAACGATAGGG 57.269 45.455 0.00 0.00 43.77 3.53
2194 6056 6.477033 CAGATTCTTGTCTACCAAACGATAGG 59.523 42.308 0.00 0.00 43.77 2.57
2195 6057 6.477033 CCAGATTCTTGTCTACCAAACGATAG 59.523 42.308 0.00 0.00 46.19 2.08
2196 6058 6.338146 CCAGATTCTTGTCTACCAAACGATA 58.662 40.000 0.00 0.00 31.20 2.92
2198 6060 4.562757 CCCAGATTCTTGTCTACCAAACGA 60.563 45.833 0.00 0.00 31.20 3.85
2199 6061 3.684788 CCCAGATTCTTGTCTACCAAACG 59.315 47.826 0.00 0.00 31.20 3.60
2200 6062 4.695928 GTCCCAGATTCTTGTCTACCAAAC 59.304 45.833 0.00 0.00 31.20 2.93
2201 6063 4.597507 AGTCCCAGATTCTTGTCTACCAAA 59.402 41.667 0.00 0.00 31.20 3.28
2202 6064 4.020218 CAGTCCCAGATTCTTGTCTACCAA 60.020 45.833 0.00 0.00 0.00 3.67
2203 6065 3.515502 CAGTCCCAGATTCTTGTCTACCA 59.484 47.826 0.00 0.00 0.00 3.25
2204 6066 3.769844 TCAGTCCCAGATTCTTGTCTACC 59.230 47.826 0.00 0.00 0.00 3.18
2205 6067 5.172205 GTTCAGTCCCAGATTCTTGTCTAC 58.828 45.833 0.00 0.00 0.00 2.59
2206 6068 4.223032 GGTTCAGTCCCAGATTCTTGTCTA 59.777 45.833 0.00 0.00 0.00 2.59
2207 6069 3.008485 GGTTCAGTCCCAGATTCTTGTCT 59.992 47.826 0.00 0.00 0.00 3.41
2208 6070 3.008485 AGGTTCAGTCCCAGATTCTTGTC 59.992 47.826 0.00 0.00 0.00 3.18
2209 6071 2.982488 AGGTTCAGTCCCAGATTCTTGT 59.018 45.455 0.00 0.00 0.00 3.16
2210 6072 3.244700 ACAGGTTCAGTCCCAGATTCTTG 60.245 47.826 0.00 0.00 0.00 3.02
2211 6073 2.982488 ACAGGTTCAGTCCCAGATTCTT 59.018 45.455 0.00 0.00 0.00 2.52
2212 6074 2.625639 ACAGGTTCAGTCCCAGATTCT 58.374 47.619 0.00 0.00 0.00 2.40
2213 6075 3.369576 GGTACAGGTTCAGTCCCAGATTC 60.370 52.174 0.00 0.00 0.00 2.52
2214 6076 2.572104 GGTACAGGTTCAGTCCCAGATT 59.428 50.000 0.00 0.00 0.00 2.40
2215 6077 2.188817 GGTACAGGTTCAGTCCCAGAT 58.811 52.381 0.00 0.00 0.00 2.90
2216 6078 1.640917 GGTACAGGTTCAGTCCCAGA 58.359 55.000 0.00 0.00 0.00 3.86
2217 6079 0.613777 GGGTACAGGTTCAGTCCCAG 59.386 60.000 0.00 0.00 35.43 4.45
2218 6080 0.192566 AGGGTACAGGTTCAGTCCCA 59.807 55.000 0.00 0.00 37.56 4.37
2219 6081 0.613777 CAGGGTACAGGTTCAGTCCC 59.386 60.000 0.00 0.00 35.56 4.46
2329 6205 0.744281 ACCCGCCAAAGTTTGACAAG 59.256 50.000 17.33 5.77 0.00 3.16
2410 6286 4.523173 GGGCATATGTACTAGTGCAGAGTA 59.477 45.833 18.73 7.43 39.27 2.59
2411 6287 3.322254 GGGCATATGTACTAGTGCAGAGT 59.678 47.826 18.73 5.39 39.27 3.24
2412 6288 3.306364 GGGGCATATGTACTAGTGCAGAG 60.306 52.174 18.73 11.65 39.27 3.35
2413 6289 2.632996 GGGGCATATGTACTAGTGCAGA 59.367 50.000 18.73 14.92 39.27 4.26
2414 6290 2.634940 AGGGGCATATGTACTAGTGCAG 59.365 50.000 18.73 7.02 39.27 4.41
2415 6291 2.368548 CAGGGGCATATGTACTAGTGCA 59.631 50.000 16.34 16.34 39.27 4.57
2416 6292 2.368875 ACAGGGGCATATGTACTAGTGC 59.631 50.000 5.39 4.49 36.88 4.40
2417 6293 3.388024 ACACAGGGGCATATGTACTAGTG 59.612 47.826 5.39 10.54 0.00 2.74
2434 6310 0.457851 TTTTCCCCGTTGCAACACAG 59.542 50.000 28.01 15.89 0.00 3.66
2437 6313 2.168521 TCAAATTTTCCCCGTTGCAACA 59.831 40.909 28.01 8.16 0.00 3.33
2449 6325 5.691754 AGCGAATCAGGTTTGTCAAATTTTC 59.308 36.000 0.40 1.21 0.00 2.29
2450 6326 5.600696 AGCGAATCAGGTTTGTCAAATTTT 58.399 33.333 0.40 0.00 0.00 1.82
2454 6330 3.795150 GCAAGCGAATCAGGTTTGTCAAA 60.795 43.478 0.00 0.00 0.00 2.69
2455 6331 2.287547 GCAAGCGAATCAGGTTTGTCAA 60.288 45.455 0.00 0.00 0.00 3.18
2456 6332 1.266718 GCAAGCGAATCAGGTTTGTCA 59.733 47.619 0.00 0.00 0.00 3.58
2457 6333 1.401539 GGCAAGCGAATCAGGTTTGTC 60.402 52.381 0.00 0.00 0.00 3.18
2458 6334 0.598065 GGCAAGCGAATCAGGTTTGT 59.402 50.000 0.00 0.00 0.00 2.83
2459 6335 0.597568 TGGCAAGCGAATCAGGTTTG 59.402 50.000 0.00 0.00 0.00 2.93
2467 6346 0.673644 AAGCGTAGTGGCAAGCGAAT 60.674 50.000 10.10 0.00 34.64 3.34
2473 6352 2.823924 TTAGTGAAGCGTAGTGGCAA 57.176 45.000 0.00 0.00 34.64 4.52
2491 6370 8.421249 TTCCAGGTTTGTCAGAATTGAATATT 57.579 30.769 0.00 0.00 34.49 1.28
2513 6392 6.365520 ACACATCCAGGATAACCTTATTTCC 58.634 40.000 0.00 0.00 45.36 3.13
2557 6458 8.464404 ACATCAACACTTCATGATCCAAATAAG 58.536 33.333 0.00 0.00 34.12 1.73
2580 6481 1.066143 CGTTAGGGTGGCTTCTCACAT 60.066 52.381 0.00 0.00 39.27 3.21
2591 6492 3.129988 AGTCGATTAAGGACGTTAGGGTG 59.870 47.826 0.00 0.00 39.38 4.61
2600 6501 9.235537 GAGTTTAAGTATGAGTCGATTAAGGAC 57.764 37.037 0.00 2.10 34.62 3.85
2606 6507 6.531948 GTGCAGAGTTTAAGTATGAGTCGATT 59.468 38.462 0.00 0.00 0.00 3.34
2609 6510 5.403246 AGTGCAGAGTTTAAGTATGAGTCG 58.597 41.667 0.00 0.00 0.00 4.18
2613 6514 6.109156 TGGAAGTGCAGAGTTTAAGTATGA 57.891 37.500 0.00 0.00 0.00 2.15
2619 6520 4.265904 TCGATGGAAGTGCAGAGTTTAA 57.734 40.909 0.00 0.00 0.00 1.52
2623 6524 2.234661 TCATTCGATGGAAGTGCAGAGT 59.765 45.455 0.00 0.00 35.19 3.24
2647 6548 8.798859 AAAGACTATTCAATGCATCACTACTT 57.201 30.769 0.00 0.00 0.00 2.24
2651 6552 7.466455 CGCTAAAAGACTATTCAATGCATCACT 60.466 37.037 0.00 0.00 0.00 3.41
2661 6562 5.670792 TTCTCCCGCTAAAAGACTATTCA 57.329 39.130 0.00 0.00 0.00 2.57
2693 6594 6.647334 TTTCCATGCACTTGTAAGAATCAA 57.353 33.333 0.00 0.00 0.00 2.57
2697 6598 7.168219 AGACTATTTCCATGCACTTGTAAGAA 58.832 34.615 0.00 0.00 0.00 2.52
2703 6604 6.749118 GCTAAAAGACTATTTCCATGCACTTG 59.251 38.462 0.00 0.00 0.00 3.16
2705 6606 5.065218 CGCTAAAAGACTATTTCCATGCACT 59.935 40.000 0.00 0.00 0.00 4.40
2720 6621 9.817809 ACATTGTATATTTCTCTCGCTAAAAGA 57.182 29.630 0.00 0.00 0.00 2.52
2721 6622 9.855361 CACATTGTATATTTCTCTCGCTAAAAG 57.145 33.333 0.00 0.00 0.00 2.27
2722 6623 9.594478 TCACATTGTATATTTCTCTCGCTAAAA 57.406 29.630 0.00 0.00 0.00 1.52
2725 6626 9.411801 GAATCACATTGTATATTTCTCTCGCTA 57.588 33.333 0.00 0.00 0.00 4.26
2727 6628 8.304202 AGAATCACATTGTATATTTCTCTCGC 57.696 34.615 0.00 0.00 0.00 5.03
2737 6638 9.817809 GAGTTGTCCTAAGAATCACATTGTATA 57.182 33.333 0.00 0.00 0.00 1.47
2738 6639 8.543774 AGAGTTGTCCTAAGAATCACATTGTAT 58.456 33.333 0.00 0.00 0.00 2.29
2739 6640 7.907389 AGAGTTGTCCTAAGAATCACATTGTA 58.093 34.615 0.00 0.00 0.00 2.41
2740 6641 6.773638 AGAGTTGTCCTAAGAATCACATTGT 58.226 36.000 0.00 0.00 0.00 2.71
2741 6642 6.314896 GGAGAGTTGTCCTAAGAATCACATTG 59.685 42.308 0.00 0.00 33.30 2.82
2742 6643 6.013379 TGGAGAGTTGTCCTAAGAATCACATT 60.013 38.462 0.00 0.00 37.52 2.71
2743 6644 5.485353 TGGAGAGTTGTCCTAAGAATCACAT 59.515 40.000 0.00 0.00 37.52 3.21
2744 6645 4.838423 TGGAGAGTTGTCCTAAGAATCACA 59.162 41.667 0.00 0.00 37.52 3.58
2745 6646 5.407407 TGGAGAGTTGTCCTAAGAATCAC 57.593 43.478 0.00 0.00 37.52 3.06
2746 6647 5.306937 TGTTGGAGAGTTGTCCTAAGAATCA 59.693 40.000 0.00 0.00 37.52 2.57
2747 6648 5.639931 GTGTTGGAGAGTTGTCCTAAGAATC 59.360 44.000 0.00 0.00 37.52 2.52
2748 6649 5.308237 AGTGTTGGAGAGTTGTCCTAAGAAT 59.692 40.000 0.00 0.00 37.52 2.40
2749 6650 4.654262 AGTGTTGGAGAGTTGTCCTAAGAA 59.346 41.667 0.00 0.00 37.52 2.52
2750 6651 4.039245 CAGTGTTGGAGAGTTGTCCTAAGA 59.961 45.833 0.00 0.00 37.52 2.10
2751 6652 4.039245 TCAGTGTTGGAGAGTTGTCCTAAG 59.961 45.833 0.00 0.00 37.52 2.18
2752 6653 3.964688 TCAGTGTTGGAGAGTTGTCCTAA 59.035 43.478 0.00 0.00 37.52 2.69
2753 6654 3.321111 GTCAGTGTTGGAGAGTTGTCCTA 59.679 47.826 0.00 0.00 37.52 2.94
2754 6655 2.103263 GTCAGTGTTGGAGAGTTGTCCT 59.897 50.000 0.00 0.00 37.52 3.85
2755 6656 2.484889 GTCAGTGTTGGAGAGTTGTCC 58.515 52.381 0.00 0.00 37.10 4.02
2756 6657 2.103263 AGGTCAGTGTTGGAGAGTTGTC 59.897 50.000 0.00 0.00 0.00 3.18
2757 6658 2.119495 AGGTCAGTGTTGGAGAGTTGT 58.881 47.619 0.00 0.00 0.00 3.32
2758 6659 2.158900 ACAGGTCAGTGTTGGAGAGTTG 60.159 50.000 0.00 0.00 0.00 3.16
2759 6660 2.119495 ACAGGTCAGTGTTGGAGAGTT 58.881 47.619 0.00 0.00 0.00 3.01
2760 6661 1.794714 ACAGGTCAGTGTTGGAGAGT 58.205 50.000 0.00 0.00 0.00 3.24
2761 6662 4.336889 TTTACAGGTCAGTGTTGGAGAG 57.663 45.455 0.00 0.00 31.46 3.20
2762 6663 4.764050 TTTTACAGGTCAGTGTTGGAGA 57.236 40.909 0.00 0.00 31.46 3.71
2763 6664 6.369065 GTCTATTTTACAGGTCAGTGTTGGAG 59.631 42.308 0.00 0.00 31.46 3.86
2764 6665 6.183361 TGTCTATTTTACAGGTCAGTGTTGGA 60.183 38.462 0.00 0.00 31.46 3.53
2765 6666 5.995282 TGTCTATTTTACAGGTCAGTGTTGG 59.005 40.000 0.00 0.00 31.46 3.77
2766 6667 6.706270 AGTGTCTATTTTACAGGTCAGTGTTG 59.294 38.462 0.00 0.00 31.46 3.33
2767 6668 6.706270 CAGTGTCTATTTTACAGGTCAGTGTT 59.294 38.462 0.00 0.00 31.46 3.32
2768 6669 6.223852 CAGTGTCTATTTTACAGGTCAGTGT 58.776 40.000 0.00 0.00 34.21 3.55
2769 6670 5.120830 GCAGTGTCTATTTTACAGGTCAGTG 59.879 44.000 0.00 0.00 0.00 3.66
2770 6671 5.221641 TGCAGTGTCTATTTTACAGGTCAGT 60.222 40.000 0.00 0.00 0.00 3.41
2771 6672 5.237815 TGCAGTGTCTATTTTACAGGTCAG 58.762 41.667 0.00 0.00 0.00 3.51
2772 6673 5.222079 TGCAGTGTCTATTTTACAGGTCA 57.778 39.130 0.00 0.00 0.00 4.02
2773 6674 5.294552 GGATGCAGTGTCTATTTTACAGGTC 59.705 44.000 0.00 0.00 0.00 3.85
2774 6675 5.186198 GGATGCAGTGTCTATTTTACAGGT 58.814 41.667 0.00 0.00 0.00 4.00
2775 6676 4.271049 CGGATGCAGTGTCTATTTTACAGG 59.729 45.833 0.00 0.00 0.00 4.00
2776 6677 4.870426 ACGGATGCAGTGTCTATTTTACAG 59.130 41.667 0.00 0.00 0.00 2.74
2777 6678 4.827692 ACGGATGCAGTGTCTATTTTACA 58.172 39.130 0.00 0.00 0.00 2.41
2778 6679 4.270325 GGACGGATGCAGTGTCTATTTTAC 59.730 45.833 13.41 0.00 33.21 2.01
2779 6680 4.439057 GGACGGATGCAGTGTCTATTTTA 58.561 43.478 13.41 0.00 33.21 1.52
2780 6681 3.270877 GGACGGATGCAGTGTCTATTTT 58.729 45.455 13.41 0.00 33.21 1.82
2781 6682 2.738643 CGGACGGATGCAGTGTCTATTT 60.739 50.000 13.41 0.00 33.21 1.40
2782 6683 1.202417 CGGACGGATGCAGTGTCTATT 60.202 52.381 13.41 0.00 33.21 1.73
2783 6684 0.385751 CGGACGGATGCAGTGTCTAT 59.614 55.000 13.41 0.00 33.21 1.98
2784 6685 1.807226 CGGACGGATGCAGTGTCTA 59.193 57.895 13.41 0.00 33.21 2.59
2785 6686 2.573869 CGGACGGATGCAGTGTCT 59.426 61.111 13.41 0.00 33.21 3.41
2786 6687 3.188786 GCGGACGGATGCAGTGTC 61.189 66.667 7.11 7.11 0.00 3.67
2788 6689 4.794439 TCGCGGACGGATGCAGTG 62.794 66.667 6.13 0.00 40.63 3.66
2789 6690 4.063967 TTCGCGGACGGATGCAGT 62.064 61.111 6.13 0.00 40.63 4.40
2790 6691 3.554692 GTTCGCGGACGGATGCAG 61.555 66.667 6.13 0.00 40.63 4.41
2792 6693 4.814294 AGGTTCGCGGACGGATGC 62.814 66.667 12.25 0.00 40.63 3.91
2793 6694 2.885644 CAGGTTCGCGGACGGATG 60.886 66.667 12.25 6.54 40.63 3.51
2794 6695 4.143333 CCAGGTTCGCGGACGGAT 62.143 66.667 12.25 0.00 40.63 4.18
2796 6697 4.796231 CTCCAGGTTCGCGGACGG 62.796 72.222 12.25 8.39 40.63 4.79
2797 6698 4.796231 CCTCCAGGTTCGCGGACG 62.796 72.222 12.25 0.00 42.01 4.79
2798 6699 3.379445 TCCTCCAGGTTCGCGGAC 61.379 66.667 9.70 9.70 36.34 4.79
2799 6700 3.379445 GTCCTCCAGGTTCGCGGA 61.379 66.667 6.13 0.00 36.34 5.54
2800 6701 4.452733 GGTCCTCCAGGTTCGCGG 62.453 72.222 6.13 0.00 36.34 6.46
2801 6702 4.796231 CGGTCCTCCAGGTTCGCG 62.796 72.222 0.00 0.00 36.34 5.87
2802 6703 4.452733 CCGGTCCTCCAGGTTCGC 62.453 72.222 0.00 0.00 36.34 4.70
2803 6704 4.452733 GCCGGTCCTCCAGGTTCG 62.453 72.222 1.90 0.00 36.34 3.95
2804 6705 4.097361 GGCCGGTCCTCCAGGTTC 62.097 72.222 1.90 0.00 36.34 3.62
2822 6723 1.961180 GACCTCCTCCCACATCCGTG 61.961 65.000 0.00 0.00 43.21 4.94
2823 6724 1.686110 GACCTCCTCCCACATCCGT 60.686 63.158 0.00 0.00 0.00 4.69
2824 6725 1.050988 ATGACCTCCTCCCACATCCG 61.051 60.000 0.00 0.00 0.00 4.18
2825 6726 0.471617 CATGACCTCCTCCCACATCC 59.528 60.000 0.00 0.00 0.00 3.51
2826 6727 1.139853 GACATGACCTCCTCCCACATC 59.860 57.143 0.00 0.00 0.00 3.06
2827 6728 1.207791 GACATGACCTCCTCCCACAT 58.792 55.000 0.00 0.00 0.00 3.21
2828 6729 0.117140 AGACATGACCTCCTCCCACA 59.883 55.000 0.00 0.00 0.00 4.17
2829 6730 0.539051 CAGACATGACCTCCTCCCAC 59.461 60.000 0.00 0.00 0.00 4.61
2830 6731 0.413434 TCAGACATGACCTCCTCCCA 59.587 55.000 0.00 0.00 0.00 4.37
2831 6732 1.799933 ATCAGACATGACCTCCTCCC 58.200 55.000 0.00 0.00 38.57 4.30
2832 6733 2.744494 GCAATCAGACATGACCTCCTCC 60.744 54.545 0.00 0.00 38.57 4.30
2833 6734 2.093288 TGCAATCAGACATGACCTCCTC 60.093 50.000 0.00 0.00 38.57 3.71
2834 6735 1.911357 TGCAATCAGACATGACCTCCT 59.089 47.619 0.00 0.00 38.57 3.69
2835 6736 2.408271 TGCAATCAGACATGACCTCC 57.592 50.000 0.00 0.00 38.57 4.30
2836 6737 4.495349 CGAAATGCAATCAGACATGACCTC 60.495 45.833 0.00 0.00 38.57 3.85
2837 6738 3.376234 CGAAATGCAATCAGACATGACCT 59.624 43.478 0.00 0.00 38.57 3.85
2838 6739 3.488047 CCGAAATGCAATCAGACATGACC 60.488 47.826 0.00 0.00 38.57 4.02
2839 6740 3.374988 TCCGAAATGCAATCAGACATGAC 59.625 43.478 0.00 0.00 38.57 3.06
2840 6741 3.608796 TCCGAAATGCAATCAGACATGA 58.391 40.909 0.00 0.00 40.50 3.07
2841 6742 4.095334 TCTTCCGAAATGCAATCAGACATG 59.905 41.667 0.00 0.00 0.00 3.21
2842 6743 4.264253 TCTTCCGAAATGCAATCAGACAT 58.736 39.130 0.00 0.00 0.00 3.06
2843 6744 3.673902 TCTTCCGAAATGCAATCAGACA 58.326 40.909 0.00 0.00 0.00 3.41
2844 6745 4.685169 TTCTTCCGAAATGCAATCAGAC 57.315 40.909 0.00 0.00 0.00 3.51
2849 6750 5.516339 CGCTAAATTTCTTCCGAAATGCAAT 59.484 36.000 0.00 0.00 46.36 3.56
2858 6759 5.277601 TCACTTTCGCTAAATTTCTTCCG 57.722 39.130 0.00 0.00 0.00 4.30
2870 6771 4.499696 CCCTCAAATTTGTTCACTTTCGCT 60.500 41.667 17.47 0.00 0.00 4.93
2871 6772 3.735746 CCCTCAAATTTGTTCACTTTCGC 59.264 43.478 17.47 0.00 0.00 4.70
2908 6809 5.751509 TCCAAGTATGAATTAATGTCGTCCG 59.248 40.000 0.00 0.00 0.00 4.79
2963 6864 9.965824 ATGAAACACAACAGGTTTTATCTAAAG 57.034 29.630 0.00 0.00 38.50 1.85
2979 6880 4.136796 CCTCCAGTCAAGATGAAACACAA 58.863 43.478 0.00 0.00 0.00 3.33
2982 6883 4.705110 TTCCTCCAGTCAAGATGAAACA 57.295 40.909 0.00 0.00 0.00 2.83
2983 6884 4.821805 TGTTTCCTCCAGTCAAGATGAAAC 59.178 41.667 12.06 12.06 43.43 2.78
2992 6893 4.764050 TGTAGTTTGTTTCCTCCAGTCA 57.236 40.909 0.00 0.00 0.00 3.41
3027 6928 9.800433 GACTAGGTTTAGAGTATGGTTTAGTTC 57.200 37.037 0.00 0.00 0.00 3.01
3035 6936 9.968870 GTCATTTAGACTAGGTTTAGAGTATGG 57.031 37.037 0.00 0.00 44.09 2.74
3037 6938 8.848182 CGGTCATTTAGACTAGGTTTAGAGTAT 58.152 37.037 0.00 0.00 46.72 2.12
3062 6963 4.117372 GGCAAACGAGCGTCGACG 62.117 66.667 32.57 32.57 43.74 5.12
3067 6968 0.039527 GAAAATGGGCAAACGAGCGT 60.040 50.000 0.00 0.00 34.64 5.07
3069 6970 0.732538 CCGAAAATGGGCAAACGAGC 60.733 55.000 0.00 0.00 0.00 5.03
3102 7003 3.257624 GGAGTTAGAGTTTCAGTTCCCGA 59.742 47.826 0.00 0.00 0.00 5.14
3114 7015 2.832733 GGCTACAAGGTGGAGTTAGAGT 59.167 50.000 0.00 0.00 28.73 3.24
3118 7019 2.185387 GGAGGCTACAAGGTGGAGTTA 58.815 52.381 0.00 0.00 28.73 2.24
3120 7021 1.258445 CGGAGGCTACAAGGTGGAGT 61.258 60.000 0.00 0.00 28.73 3.85
3123 7024 2.125106 GCGGAGGCTACAAGGTGG 60.125 66.667 0.00 0.00 35.83 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.