Multiple sequence alignment - TraesCS2B01G054500
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G054500 | chr2B | 100.000 | 6312 | 0 | 0 | 1 | 6312 | 26575008 | 26568697 | 0.000000e+00 | 11657.0 |
1 | TraesCS2B01G054500 | chr2B | 90.919 | 958 | 63 | 11 | 4490 | 5439 | 25856844 | 25855903 | 0.000000e+00 | 1266.0 |
2 | TraesCS2B01G054500 | chr2B | 96.970 | 264 | 8 | 0 | 6027 | 6290 | 298132499 | 298132236 | 1.610000e-120 | 444.0 |
3 | TraesCS2B01G054500 | chr2B | 85.664 | 286 | 30 | 6 | 270 | 549 | 26581549 | 26581269 | 2.230000e-74 | 291.0 |
4 | TraesCS2B01G054500 | chr2B | 85.338 | 266 | 31 | 5 | 270 | 534 | 26717911 | 26717653 | 1.040000e-67 | 268.0 |
5 | TraesCS2B01G054500 | chr2B | 84.314 | 255 | 35 | 4 | 280 | 533 | 26589096 | 26588846 | 1.760000e-60 | 244.0 |
6 | TraesCS2B01G054500 | chr2B | 78.689 | 183 | 30 | 6 | 87 | 264 | 26581799 | 26581621 | 5.170000e-21 | 113.0 |
7 | TraesCS2B01G054500 | chr2D | 91.638 | 4401 | 237 | 48 | 157 | 4491 | 14779110 | 14774775 | 0.000000e+00 | 5967.0 |
8 | TraesCS2B01G054500 | chr2D | 85.263 | 285 | 30 | 7 | 270 | 547 | 14785093 | 14784814 | 3.730000e-72 | 283.0 |
9 | TraesCS2B01G054500 | chr2D | 84.047 | 257 | 34 | 4 | 279 | 534 | 14801194 | 14800944 | 2.270000e-59 | 241.0 |
10 | TraesCS2B01G054500 | chr2D | 98.165 | 109 | 2 | 0 | 1 | 109 | 14779221 | 14779113 | 2.320000e-44 | 191.0 |
11 | TraesCS2B01G054500 | chr2D | 89.412 | 85 | 5 | 2 | 1 | 85 | 14786514 | 14786434 | 3.110000e-18 | 104.0 |
12 | TraesCS2B01G054500 | chr2A | 92.235 | 3168 | 184 | 29 | 1 | 3137 | 16872755 | 16869619 | 0.000000e+00 | 4431.0 |
13 | TraesCS2B01G054500 | chr2A | 89.211 | 862 | 60 | 19 | 3463 | 4301 | 16868631 | 16867780 | 0.000000e+00 | 1046.0 |
14 | TraesCS2B01G054500 | chr2A | 86.957 | 276 | 25 | 7 | 281 | 550 | 16881677 | 16881407 | 3.700000e-77 | 300.0 |
15 | TraesCS2B01G054500 | chr2A | 94.904 | 157 | 8 | 0 | 4335 | 4491 | 16867784 | 16867628 | 4.890000e-61 | 246.0 |
16 | TraesCS2B01G054500 | chr2A | 88.398 | 181 | 6 | 9 | 3221 | 3399 | 16869367 | 16869200 | 2.980000e-48 | 204.0 |
17 | TraesCS2B01G054500 | chr2A | 97.297 | 37 | 1 | 0 | 3135 | 3171 | 16869458 | 16869422 | 5.280000e-06 | 63.9 |
18 | TraesCS2B01G054500 | chr3D | 83.700 | 2092 | 291 | 31 | 1018 | 3088 | 581507696 | 581505634 | 0.000000e+00 | 1929.0 |
19 | TraesCS2B01G054500 | chr3D | 80.183 | 2079 | 338 | 42 | 1069 | 3119 | 581514836 | 581512804 | 0.000000e+00 | 1489.0 |
20 | TraesCS2B01G054500 | chr3D | 80.308 | 1950 | 331 | 35 | 1277 | 3201 | 581458707 | 581456786 | 0.000000e+00 | 1424.0 |
21 | TraesCS2B01G054500 | chr3D | 78.035 | 1598 | 265 | 47 | 888 | 2437 | 581421247 | 581419688 | 0.000000e+00 | 928.0 |
22 | TraesCS2B01G054500 | chr3D | 79.142 | 1189 | 212 | 23 | 1915 | 3092 | 573403365 | 573404528 | 0.000000e+00 | 789.0 |
23 | TraesCS2B01G054500 | chr3D | 81.115 | 879 | 128 | 23 | 999 | 1857 | 581518616 | 581517756 | 0.000000e+00 | 669.0 |
24 | TraesCS2B01G054500 | chr3D | 85.561 | 561 | 74 | 4 | 2244 | 2802 | 581405433 | 581404878 | 1.180000e-161 | 580.0 |
25 | TraesCS2B01G054500 | chr3D | 78.112 | 932 | 163 | 27 | 1449 | 2355 | 581390779 | 581389864 | 2.570000e-153 | 553.0 |
26 | TraesCS2B01G054500 | chr3D | 87.197 | 289 | 33 | 2 | 2916 | 3200 | 581419674 | 581419386 | 6.100000e-85 | 326.0 |
27 | TraesCS2B01G054500 | chr3D | 81.533 | 287 | 47 | 5 | 2350 | 2632 | 581388418 | 581388134 | 1.370000e-56 | 231.0 |
28 | TraesCS2B01G054500 | chr3B | 81.253 | 2363 | 351 | 48 | 888 | 3200 | 776996223 | 776998543 | 0.000000e+00 | 1825.0 |
29 | TraesCS2B01G054500 | chr3B | 79.772 | 2190 | 368 | 42 | 918 | 3078 | 776863221 | 776865364 | 0.000000e+00 | 1520.0 |
30 | TraesCS2B01G054500 | chr3B | 78.693 | 2403 | 360 | 90 | 1002 | 3340 | 777001092 | 777003406 | 0.000000e+00 | 1461.0 |
31 | TraesCS2B01G054500 | chr3B | 81.825 | 1359 | 187 | 34 | 4491 | 5805 | 735659984 | 735658642 | 0.000000e+00 | 1086.0 |
32 | TraesCS2B01G054500 | chr3B | 81.129 | 567 | 69 | 20 | 4490 | 5031 | 730762064 | 730761511 | 2.720000e-113 | 420.0 |
33 | TraesCS2B01G054500 | chr3B | 78.017 | 464 | 59 | 25 | 889 | 1345 | 776557819 | 776558246 | 1.050000e-62 | 252.0 |
34 | TraesCS2B01G054500 | chr6B | 90.023 | 1293 | 106 | 16 | 4491 | 5778 | 283705267 | 283706541 | 0.000000e+00 | 1652.0 |
35 | TraesCS2B01G054500 | chr6B | 78.315 | 807 | 112 | 40 | 5041 | 5799 | 10644608 | 10643817 | 4.460000e-126 | 462.0 |
36 | TraesCS2B01G054500 | chr6B | 96.981 | 265 | 8 | 0 | 6027 | 6291 | 556846131 | 556846395 | 4.490000e-121 | 446.0 |
37 | TraesCS2B01G054500 | chr6B | 96.296 | 270 | 9 | 1 | 6023 | 6292 | 704947975 | 704948243 | 5.810000e-120 | 442.0 |
38 | TraesCS2B01G054500 | chr6B | 95.604 | 273 | 12 | 0 | 6026 | 6298 | 281153804 | 281153532 | 7.510000e-119 | 438.0 |
39 | TraesCS2B01G054500 | chr3A | 80.096 | 2075 | 341 | 45 | 1069 | 3116 | 716586894 | 716588923 | 0.000000e+00 | 1478.0 |
40 | TraesCS2B01G054500 | chr3A | 79.037 | 1994 | 340 | 51 | 1248 | 3198 | 716597843 | 716599801 | 0.000000e+00 | 1295.0 |
41 | TraesCS2B01G054500 | chr3A | 80.990 | 1131 | 158 | 33 | 925 | 2038 | 716563550 | 716564640 | 0.000000e+00 | 845.0 |
42 | TraesCS2B01G054500 | chr3A | 77.671 | 1357 | 261 | 33 | 1248 | 2589 | 716627887 | 716629216 | 0.000000e+00 | 789.0 |
43 | TraesCS2B01G054500 | chr3A | 83.259 | 675 | 103 | 9 | 2419 | 3090 | 716566702 | 716567369 | 4.180000e-171 | 612.0 |
44 | TraesCS2B01G054500 | chr3A | 78.306 | 484 | 67 | 19 | 1021 | 1485 | 716567699 | 716568163 | 1.730000e-70 | 278.0 |
45 | TraesCS2B01G054500 | chr3A | 84.746 | 236 | 36 | 0 | 2030 | 2265 | 716565942 | 716566177 | 2.940000e-58 | 237.0 |
46 | TraesCS2B01G054500 | chr7A | 81.865 | 1351 | 178 | 40 | 4479 | 5785 | 461314480 | 461315807 | 0.000000e+00 | 1075.0 |
47 | TraesCS2B01G054500 | chr7A | 87.161 | 958 | 96 | 20 | 4480 | 5427 | 44659628 | 44658688 | 0.000000e+00 | 1062.0 |
48 | TraesCS2B01G054500 | chr7A | 87.056 | 958 | 96 | 20 | 4480 | 5427 | 44551957 | 44551018 | 0.000000e+00 | 1057.0 |
49 | TraesCS2B01G054500 | chr7A | 90.134 | 821 | 64 | 11 | 4497 | 5309 | 5177667 | 5178478 | 0.000000e+00 | 1051.0 |
50 | TraesCS2B01G054500 | chr7A | 87.056 | 394 | 44 | 6 | 5392 | 5785 | 5178478 | 5178864 | 7.510000e-119 | 438.0 |
51 | TraesCS2B01G054500 | chr7A | 94.444 | 36 | 1 | 1 | 5895 | 5929 | 13134275 | 13134240 | 3.000000e-03 | 54.7 |
52 | TraesCS2B01G054500 | chr4A | 87.835 | 896 | 79 | 21 | 4500 | 5383 | 91596239 | 91595362 | 0.000000e+00 | 1024.0 |
53 | TraesCS2B01G054500 | chr4D | 86.114 | 965 | 104 | 22 | 4475 | 5427 | 37617182 | 37618128 | 0.000000e+00 | 1013.0 |
54 | TraesCS2B01G054500 | chr5B | 96.981 | 265 | 8 | 0 | 6027 | 6291 | 231110887 | 231111151 | 4.490000e-121 | 446.0 |
55 | TraesCS2B01G054500 | chr5B | 95.221 | 272 | 13 | 0 | 6026 | 6297 | 153487346 | 153487075 | 1.260000e-116 | 431.0 |
56 | TraesCS2B01G054500 | chr5B | 81.222 | 442 | 68 | 12 | 5381 | 5815 | 561627700 | 561627267 | 6.060000e-90 | 342.0 |
57 | TraesCS2B01G054500 | chr4B | 96.992 | 266 | 7 | 1 | 6025 | 6289 | 194621423 | 194621688 | 4.490000e-121 | 446.0 |
58 | TraesCS2B01G054500 | chr7B | 94.964 | 278 | 14 | 0 | 6027 | 6304 | 593940253 | 593939976 | 2.700000e-118 | 436.0 |
59 | TraesCS2B01G054500 | chr1B | 94.326 | 282 | 15 | 1 | 6027 | 6308 | 547163701 | 547163981 | 1.260000e-116 | 431.0 |
60 | TraesCS2B01G054500 | chr1D | 83.452 | 423 | 61 | 8 | 5391 | 5808 | 465458840 | 465459258 | 9.930000e-103 | 385.0 |
61 | TraesCS2B01G054500 | chr1D | 82.423 | 421 | 60 | 13 | 5390 | 5806 | 184301760 | 184301350 | 7.780000e-94 | 355.0 |
62 | TraesCS2B01G054500 | chr1D | 81.643 | 414 | 68 | 8 | 5380 | 5791 | 272869759 | 272869352 | 2.820000e-88 | 337.0 |
63 | TraesCS2B01G054500 | chr6D | 81.136 | 440 | 68 | 8 | 5380 | 5811 | 335448513 | 335448945 | 7.840000e-89 | 339.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2B01G054500 | chr2B | 26568697 | 26575008 | 6311 | True | 11657.00 | 11657 | 100.00000 | 1 | 6312 | 1 | chr2B.!!$R2 | 6311 |
1 | TraesCS2B01G054500 | chr2B | 25855903 | 25856844 | 941 | True | 1266.00 | 1266 | 90.91900 | 4490 | 5439 | 1 | chr2B.!!$R1 | 949 |
2 | TraesCS2B01G054500 | chr2B | 26581269 | 26581799 | 530 | True | 202.00 | 291 | 82.17650 | 87 | 549 | 2 | chr2B.!!$R6 | 462 |
3 | TraesCS2B01G054500 | chr2D | 14774775 | 14779221 | 4446 | True | 3079.00 | 5967 | 94.90150 | 1 | 4491 | 2 | chr2D.!!$R2 | 4490 |
4 | TraesCS2B01G054500 | chr2A | 16867628 | 16872755 | 5127 | True | 1198.18 | 4431 | 92.40900 | 1 | 4491 | 5 | chr2A.!!$R2 | 4490 |
5 | TraesCS2B01G054500 | chr3D | 581505634 | 581507696 | 2062 | True | 1929.00 | 1929 | 83.70000 | 1018 | 3088 | 1 | chr3D.!!$R3 | 2070 |
6 | TraesCS2B01G054500 | chr3D | 581456786 | 581458707 | 1921 | True | 1424.00 | 1424 | 80.30800 | 1277 | 3201 | 1 | chr3D.!!$R2 | 1924 |
7 | TraesCS2B01G054500 | chr3D | 581512804 | 581518616 | 5812 | True | 1079.00 | 1489 | 80.64900 | 999 | 3119 | 2 | chr3D.!!$R6 | 2120 |
8 | TraesCS2B01G054500 | chr3D | 573403365 | 573404528 | 1163 | False | 789.00 | 789 | 79.14200 | 1915 | 3092 | 1 | chr3D.!!$F1 | 1177 |
9 | TraesCS2B01G054500 | chr3D | 581419386 | 581421247 | 1861 | True | 627.00 | 928 | 82.61600 | 888 | 3200 | 2 | chr3D.!!$R5 | 2312 |
10 | TraesCS2B01G054500 | chr3D | 581404878 | 581405433 | 555 | True | 580.00 | 580 | 85.56100 | 2244 | 2802 | 1 | chr3D.!!$R1 | 558 |
11 | TraesCS2B01G054500 | chr3D | 581388134 | 581390779 | 2645 | True | 392.00 | 553 | 79.82250 | 1449 | 2632 | 2 | chr3D.!!$R4 | 1183 |
12 | TraesCS2B01G054500 | chr3B | 776996223 | 777003406 | 7183 | False | 1643.00 | 1825 | 79.97300 | 888 | 3340 | 2 | chr3B.!!$F3 | 2452 |
13 | TraesCS2B01G054500 | chr3B | 776863221 | 776865364 | 2143 | False | 1520.00 | 1520 | 79.77200 | 918 | 3078 | 1 | chr3B.!!$F2 | 2160 |
14 | TraesCS2B01G054500 | chr3B | 735658642 | 735659984 | 1342 | True | 1086.00 | 1086 | 81.82500 | 4491 | 5805 | 1 | chr3B.!!$R2 | 1314 |
15 | TraesCS2B01G054500 | chr3B | 730761511 | 730762064 | 553 | True | 420.00 | 420 | 81.12900 | 4490 | 5031 | 1 | chr3B.!!$R1 | 541 |
16 | TraesCS2B01G054500 | chr6B | 283705267 | 283706541 | 1274 | False | 1652.00 | 1652 | 90.02300 | 4491 | 5778 | 1 | chr6B.!!$F1 | 1287 |
17 | TraesCS2B01G054500 | chr6B | 10643817 | 10644608 | 791 | True | 462.00 | 462 | 78.31500 | 5041 | 5799 | 1 | chr6B.!!$R1 | 758 |
18 | TraesCS2B01G054500 | chr3A | 716586894 | 716588923 | 2029 | False | 1478.00 | 1478 | 80.09600 | 1069 | 3116 | 1 | chr3A.!!$F1 | 2047 |
19 | TraesCS2B01G054500 | chr3A | 716597843 | 716599801 | 1958 | False | 1295.00 | 1295 | 79.03700 | 1248 | 3198 | 1 | chr3A.!!$F2 | 1950 |
20 | TraesCS2B01G054500 | chr3A | 716627887 | 716629216 | 1329 | False | 789.00 | 789 | 77.67100 | 1248 | 2589 | 1 | chr3A.!!$F3 | 1341 |
21 | TraesCS2B01G054500 | chr3A | 716563550 | 716568163 | 4613 | False | 493.00 | 845 | 81.82525 | 925 | 3090 | 4 | chr3A.!!$F4 | 2165 |
22 | TraesCS2B01G054500 | chr7A | 461314480 | 461315807 | 1327 | False | 1075.00 | 1075 | 81.86500 | 4479 | 5785 | 1 | chr7A.!!$F1 | 1306 |
23 | TraesCS2B01G054500 | chr7A | 44658688 | 44659628 | 940 | True | 1062.00 | 1062 | 87.16100 | 4480 | 5427 | 1 | chr7A.!!$R3 | 947 |
24 | TraesCS2B01G054500 | chr7A | 44551018 | 44551957 | 939 | True | 1057.00 | 1057 | 87.05600 | 4480 | 5427 | 1 | chr7A.!!$R2 | 947 |
25 | TraesCS2B01G054500 | chr7A | 5177667 | 5178864 | 1197 | False | 744.50 | 1051 | 88.59500 | 4497 | 5785 | 2 | chr7A.!!$F2 | 1288 |
26 | TraesCS2B01G054500 | chr4A | 91595362 | 91596239 | 877 | True | 1024.00 | 1024 | 87.83500 | 4500 | 5383 | 1 | chr4A.!!$R1 | 883 |
27 | TraesCS2B01G054500 | chr4D | 37617182 | 37618128 | 946 | False | 1013.00 | 1013 | 86.11400 | 4475 | 5427 | 1 | chr4D.!!$F1 | 952 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
437 | 517 | 1.089920 | CGCTGCAGTAAGCTTGGATT | 58.910 | 50.000 | 16.64 | 0.0 | 45.94 | 3.01 | F |
1107 | 1225 | 0.673985 | TCCTCCATATGGTCTTCGCG | 59.326 | 55.000 | 21.28 | 0.0 | 36.34 | 5.87 | F |
1271 | 1410 | 1.079336 | GTAGGCCGTGTGTTCCTCC | 60.079 | 63.158 | 0.00 | 0.0 | 0.00 | 4.30 | F |
1372 | 1517 | 1.137825 | CAACGCAAACAACACCGGT | 59.862 | 52.632 | 0.00 | 0.0 | 0.00 | 5.28 | F |
2579 | 9618 | 0.370273 | GTAGATTGCGAGCAACACCG | 59.630 | 55.000 | 13.05 | 0.0 | 38.88 | 4.94 | F |
3396 | 10716 | 0.166814 | GAAAGCTGGATGTGTGCGTC | 59.833 | 55.000 | 0.00 | 0.0 | 0.00 | 5.19 | F |
3444 | 10764 | 0.109597 | CGCACATTTGAGAAGTGGCC | 60.110 | 55.000 | 0.00 | 0.0 | 33.98 | 5.36 | F |
4119 | 12012 | 1.597027 | CCGGGTTATCGATGTGGCC | 60.597 | 63.158 | 8.54 | 0.0 | 0.00 | 5.36 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1372 | 1517 | 1.006281 | AGGAAGAATGCCAAGCCATCA | 59.994 | 47.619 | 0.00 | 0.00 | 34.43 | 3.07 | R |
2127 | 3642 | 1.067071 | CCACCGGTCTACTTGGACTTC | 60.067 | 57.143 | 2.59 | 0.00 | 36.55 | 3.01 | R |
2553 | 9592 | 1.756538 | TGCTCGCAATCTACATGGAGA | 59.243 | 47.619 | 10.86 | 10.86 | 0.00 | 3.71 | R |
2937 | 9976 | 2.335316 | TTTGTTGTCGCCCAGTACTT | 57.665 | 45.000 | 0.00 | 0.00 | 0.00 | 2.24 | R |
3400 | 10720 | 0.179056 | ACCAGTTGACCTGTTGACGG | 60.179 | 55.000 | 0.00 | 0.00 | 39.74 | 4.79 | R |
4628 | 12652 | 0.455633 | GCGGCTTGATTGCTTCACAG | 60.456 | 55.000 | 0.00 | 0.00 | 32.84 | 3.66 | R |
4636 | 12660 | 2.487762 | TGGAAAAGTAGCGGCTTGATTG | 59.512 | 45.455 | 8.26 | 0.00 | 0.00 | 2.67 | R |
5994 | 16837 | 0.037326 | AGACGCATCAACCGACACAT | 60.037 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
133 | 134 | 4.403734 | ACCGTTGGAACTTGAAACCATAT | 58.596 | 39.130 | 0.00 | 0.00 | 33.56 | 1.78 |
172 | 174 | 5.061179 | TGGACTAGTTTTTCTTTCCGGAAG | 58.939 | 41.667 | 17.97 | 11.75 | 36.67 | 3.46 |
247 | 252 | 9.349145 | GATAGAGTTACTTGTTCAGAGAACTTC | 57.651 | 37.037 | 10.79 | 0.00 | 34.38 | 3.01 |
259 | 264 | 4.572389 | TCAGAGAACTTCTTGTCTTGCAAC | 59.428 | 41.667 | 0.00 | 0.00 | 32.41 | 4.17 |
297 | 369 | 7.565680 | ACTAGTACTTGGTTATATGCAGCTTT | 58.434 | 34.615 | 0.00 | 0.00 | 0.00 | 3.51 |
365 | 441 | 6.093495 | TCAGTCCTTTATTGCCTTAACGATTG | 59.907 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
437 | 517 | 1.089920 | CGCTGCAGTAAGCTTGGATT | 58.910 | 50.000 | 16.64 | 0.00 | 45.94 | 3.01 |
524 | 604 | 1.678425 | GGAGAAGAAGCAGGCTGAAGG | 60.678 | 57.143 | 20.86 | 0.00 | 0.00 | 3.46 |
541 | 621 | 3.324846 | TGAAGGAGCTAGCAAGAACTGAA | 59.675 | 43.478 | 18.83 | 0.00 | 0.00 | 3.02 |
543 | 623 | 3.169099 | AGGAGCTAGCAAGAACTGAAGA | 58.831 | 45.455 | 18.83 | 0.00 | 0.00 | 2.87 |
544 | 624 | 3.056179 | AGGAGCTAGCAAGAACTGAAGAC | 60.056 | 47.826 | 18.83 | 0.00 | 0.00 | 3.01 |
549 | 643 | 3.827008 | AGCAAGAACTGAAGACTGTCA | 57.173 | 42.857 | 10.88 | 0.00 | 0.00 | 3.58 |
550 | 644 | 4.142609 | AGCAAGAACTGAAGACTGTCAA | 57.857 | 40.909 | 10.88 | 0.00 | 0.00 | 3.18 |
562 | 656 | 8.778358 | ACTGAAGACTGTCAATGATTCTTTTAC | 58.222 | 33.333 | 10.88 | 0.00 | 0.00 | 2.01 |
606 | 709 | 5.999205 | ATGGTCAAGTTTTGAATGGCATA | 57.001 | 34.783 | 0.00 | 0.00 | 42.15 | 3.14 |
636 | 739 | 8.522178 | AAATCGAAGAATAGACAATCGGATAC | 57.478 | 34.615 | 0.00 | 0.00 | 43.58 | 2.24 |
665 | 768 | 1.103803 | TCTGTCTCCGGAGTGTATGC | 58.896 | 55.000 | 30.17 | 14.64 | 0.00 | 3.14 |
680 | 784 | 3.551890 | GTGTATGCTCGACATGATTCGTT | 59.448 | 43.478 | 0.00 | 0.00 | 40.06 | 3.85 |
687 | 791 | 5.191059 | GCTCGACATGATTCGTTATGTTTC | 58.809 | 41.667 | 0.00 | 0.00 | 37.63 | 2.78 |
702 | 806 | 9.684448 | TCGTTATGTTTCTTATCTGATCTGATC | 57.316 | 33.333 | 17.39 | 10.72 | 0.00 | 2.92 |
762 | 866 | 3.777478 | AGGATGATTTACACACGTACCG | 58.223 | 45.455 | 0.00 | 0.00 | 0.00 | 4.02 |
763 | 867 | 2.861935 | GGATGATTTACACACGTACCGG | 59.138 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
764 | 868 | 3.429272 | GGATGATTTACACACGTACCGGA | 60.429 | 47.826 | 9.46 | 0.00 | 0.00 | 5.14 |
770 | 874 | 1.211969 | CACACGTACCGGACCTCTG | 59.788 | 63.158 | 9.46 | 0.00 | 0.00 | 3.35 |
833 | 937 | 4.505742 | GGAGACTTGGTCTGATGGAAACTT | 60.506 | 45.833 | 4.85 | 0.00 | 43.53 | 2.66 |
844 | 948 | 6.533367 | GTCTGATGGAAACTTCACAGATAGAC | 59.467 | 42.308 | 0.00 | 0.00 | 39.36 | 2.59 |
845 | 949 | 6.438741 | TCTGATGGAAACTTCACAGATAGACT | 59.561 | 38.462 | 0.00 | 0.00 | 39.36 | 3.24 |
846 | 950 | 7.009179 | TGATGGAAACTTCACAGATAGACTT | 57.991 | 36.000 | 0.00 | 0.00 | 39.36 | 3.01 |
847 | 951 | 6.875726 | TGATGGAAACTTCACAGATAGACTTG | 59.124 | 38.462 | 0.00 | 0.00 | 39.36 | 3.16 |
848 | 952 | 5.551233 | TGGAAACTTCACAGATAGACTTGG | 58.449 | 41.667 | 0.00 | 0.00 | 0.00 | 3.61 |
849 | 953 | 5.071788 | TGGAAACTTCACAGATAGACTTGGT | 59.928 | 40.000 | 0.00 | 0.00 | 0.00 | 3.67 |
850 | 954 | 5.639931 | GGAAACTTCACAGATAGACTTGGTC | 59.360 | 44.000 | 0.00 | 0.00 | 0.00 | 4.02 |
851 | 955 | 5.808366 | AACTTCACAGATAGACTTGGTCA | 57.192 | 39.130 | 0.52 | 0.00 | 34.60 | 4.02 |
852 | 956 | 5.398603 | ACTTCACAGATAGACTTGGTCAG | 57.601 | 43.478 | 0.52 | 0.00 | 34.60 | 3.51 |
853 | 957 | 5.080337 | ACTTCACAGATAGACTTGGTCAGA | 58.920 | 41.667 | 0.52 | 0.00 | 34.60 | 3.27 |
854 | 958 | 5.719085 | ACTTCACAGATAGACTTGGTCAGAT | 59.281 | 40.000 | 0.52 | 0.00 | 34.60 | 2.90 |
855 | 959 | 6.892456 | ACTTCACAGATAGACTTGGTCAGATA | 59.108 | 38.462 | 0.52 | 0.00 | 34.60 | 1.98 |
856 | 960 | 6.951062 | TCACAGATAGACTTGGTCAGATAG | 57.049 | 41.667 | 0.52 | 0.00 | 34.60 | 2.08 |
857 | 961 | 6.663734 | TCACAGATAGACTTGGTCAGATAGA | 58.336 | 40.000 | 0.52 | 0.00 | 34.60 | 1.98 |
858 | 962 | 7.293828 | TCACAGATAGACTTGGTCAGATAGAT | 58.706 | 38.462 | 0.52 | 0.00 | 34.60 | 1.98 |
859 | 963 | 7.230309 | TCACAGATAGACTTGGTCAGATAGATG | 59.770 | 40.741 | 0.52 | 0.00 | 34.60 | 2.90 |
860 | 964 | 6.493115 | ACAGATAGACTTGGTCAGATAGATGG | 59.507 | 42.308 | 0.52 | 0.00 | 34.60 | 3.51 |
861 | 965 | 5.480073 | AGATAGACTTGGTCAGATAGATGGC | 59.520 | 44.000 | 0.52 | 0.00 | 34.60 | 4.40 |
862 | 966 | 3.378512 | AGACTTGGTCAGATAGATGGCA | 58.621 | 45.455 | 0.00 | 0.00 | 34.60 | 4.92 |
913 | 1020 | 4.220382 | TGTCATTTGGCTTATGAACCCTTG | 59.780 | 41.667 | 4.14 | 0.00 | 34.06 | 3.61 |
936 | 1043 | 2.224426 | TGTTTGACGGACATTGCTAGGT | 60.224 | 45.455 | 0.00 | 0.00 | 0.00 | 3.08 |
964 | 1071 | 2.943033 | TCATCGTCGAGATCACAAGCTA | 59.057 | 45.455 | 0.00 | 0.00 | 37.52 | 3.32 |
965 | 1072 | 3.565902 | TCATCGTCGAGATCACAAGCTAT | 59.434 | 43.478 | 0.00 | 0.00 | 37.52 | 2.97 |
1014 | 1126 | 4.261572 | CGAGCTTCCAATTCCAAACAAGAA | 60.262 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
1107 | 1225 | 0.673985 | TCCTCCATATGGTCTTCGCG | 59.326 | 55.000 | 21.28 | 0.00 | 36.34 | 5.87 |
1261 | 1400 | 4.078516 | GGGAACAGCGTAGGCCGT | 62.079 | 66.667 | 3.28 | 0.00 | 41.24 | 5.68 |
1271 | 1410 | 1.079336 | GTAGGCCGTGTGTTCCTCC | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
1273 | 1412 | 3.948719 | GGCCGTGTGTTCCTCCCA | 61.949 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
1365 | 1510 | 2.229062 | TCAAGGTGAACAACGCAAACAA | 59.771 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
1366 | 1511 | 2.271821 | AGGTGAACAACGCAAACAAC | 57.728 | 45.000 | 0.00 | 0.00 | 0.00 | 3.32 |
1367 | 1512 | 1.542030 | AGGTGAACAACGCAAACAACA | 59.458 | 42.857 | 0.00 | 0.00 | 0.00 | 3.33 |
1372 | 1517 | 1.137825 | CAACGCAAACAACACCGGT | 59.862 | 52.632 | 0.00 | 0.00 | 0.00 | 5.28 |
1426 | 1571 | 1.883021 | GGCCGACATTCCCAAGTTG | 59.117 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
1894 | 2081 | 4.796231 | CCTCCCGCACCGAAGACG | 62.796 | 72.222 | 0.00 | 0.00 | 39.43 | 4.18 |
1919 | 2124 | 7.148390 | CGCTGCTGCTAGTAGAGATAATAACTA | 60.148 | 40.741 | 12.54 | 0.00 | 30.02 | 2.24 |
1923 | 2128 | 9.444600 | GCTGCTAGTAGAGATAATAACTAGACT | 57.555 | 37.037 | 12.54 | 0.00 | 42.57 | 3.24 |
1972 | 2177 | 2.950172 | CTTTGTTGGCGTCCGTCGG | 61.950 | 63.158 | 4.39 | 4.39 | 40.26 | 4.79 |
2025 | 2230 | 1.994463 | CTCTTGCTAGGGGCCTTGT | 59.006 | 57.895 | 0.84 | 0.00 | 40.92 | 3.16 |
2102 | 3617 | 1.219393 | CTCGGGCAAGGAGGTTCTC | 59.781 | 63.158 | 0.00 | 0.00 | 0.00 | 2.87 |
2125 | 3640 | 3.806949 | TCTGTTTATGAGGGCCAACTT | 57.193 | 42.857 | 6.18 | 0.10 | 0.00 | 2.66 |
2127 | 3642 | 2.493278 | CTGTTTATGAGGGCCAACTTGG | 59.507 | 50.000 | 6.18 | 3.10 | 41.55 | 3.61 |
2165 | 3680 | 4.988540 | CGGTGGCGATAAAGATATTCAAGA | 59.011 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
2223 | 3747 | 1.733718 | CGAGCTCAAGATTGCGAGTCA | 60.734 | 52.381 | 15.40 | 0.00 | 0.00 | 3.41 |
2464 | 9486 | 4.327357 | ACTTACATCGCTTCATTCAACTCG | 59.673 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
2553 | 9592 | 3.181436 | ACCTAGGCTCTGCATTGCAATAT | 60.181 | 43.478 | 12.53 | 0.30 | 38.41 | 1.28 |
2579 | 9618 | 0.370273 | GTAGATTGCGAGCAACACCG | 59.630 | 55.000 | 13.05 | 0.00 | 38.88 | 4.94 |
2775 | 9814 | 2.345244 | CAGCGGAACAGGCAGTCT | 59.655 | 61.111 | 0.00 | 0.00 | 0.00 | 3.24 |
2808 | 9847 | 5.705441 | CAGTTTTGGCATTGTCCTACTAGAA | 59.295 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2889 | 9928 | 3.055602 | GGGTAAGGAGTTTGTACCACGAT | 60.056 | 47.826 | 0.00 | 0.00 | 39.29 | 3.73 |
3093 | 10141 | 2.111043 | CTGGCACCGGTGACACTT | 59.889 | 61.111 | 39.37 | 0.00 | 45.07 | 3.16 |
3122 | 10186 | 5.390387 | ACCATAGCCTTTGTAGTCCAAAAA | 58.610 | 37.500 | 0.00 | 0.00 | 42.31 | 1.94 |
3211 | 10436 | 9.213777 | AGGAATCATGTACTAGAAAGTTGGATA | 57.786 | 33.333 | 0.00 | 0.00 | 37.15 | 2.59 |
3352 | 10589 | 0.179045 | ATGCTTGAGCCGGGATGTAC | 60.179 | 55.000 | 2.18 | 0.00 | 41.18 | 2.90 |
3371 | 10608 | 5.149239 | TGTACCGGGAATAGGAATCATGTA | 58.851 | 41.667 | 6.32 | 0.00 | 0.00 | 2.29 |
3372 | 10609 | 4.618920 | ACCGGGAATAGGAATCATGTAC | 57.381 | 45.455 | 6.32 | 0.00 | 0.00 | 2.90 |
3394 | 10714 | 1.662629 | CTAGAAAGCTGGATGTGTGCG | 59.337 | 52.381 | 0.00 | 0.00 | 0.00 | 5.34 |
3395 | 10715 | 0.250467 | AGAAAGCTGGATGTGTGCGT | 60.250 | 50.000 | 0.00 | 0.00 | 0.00 | 5.24 |
3396 | 10716 | 0.166814 | GAAAGCTGGATGTGTGCGTC | 59.833 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3397 | 10717 | 0.534877 | AAAGCTGGATGTGTGCGTCA | 60.535 | 50.000 | 0.00 | 0.00 | 32.40 | 4.35 |
3398 | 10718 | 0.534877 | AAGCTGGATGTGTGCGTCAA | 60.535 | 50.000 | 0.00 | 0.00 | 32.40 | 3.18 |
3399 | 10719 | 0.952497 | AGCTGGATGTGTGCGTCAAG | 60.952 | 55.000 | 0.00 | 0.00 | 35.29 | 3.02 |
3400 | 10720 | 2.518836 | GCTGGATGTGTGCGTCAAGC | 62.519 | 60.000 | 1.05 | 1.05 | 46.73 | 4.01 |
3409 | 10729 | 2.551270 | GCGTCAAGCCGTCAACAG | 59.449 | 61.111 | 0.00 | 0.00 | 40.81 | 3.16 |
3444 | 10764 | 0.109597 | CGCACATTTGAGAAGTGGCC | 60.110 | 55.000 | 0.00 | 0.00 | 33.98 | 5.36 |
3479 | 11320 | 7.438757 | TCGATGCTAGTACAAGTGTTGTTTTTA | 59.561 | 33.333 | 0.00 | 0.00 | 42.22 | 1.52 |
3480 | 11321 | 7.740346 | CGATGCTAGTACAAGTGTTGTTTTTAG | 59.260 | 37.037 | 0.00 | 0.52 | 42.22 | 1.85 |
3659 | 11526 | 6.288294 | TGTACATATATTGTGCCACCTCTTC | 58.712 | 40.000 | 0.00 | 0.00 | 39.94 | 2.87 |
3860 | 11736 | 8.661352 | TTGCTTCTACGATTCATCATTGATAA | 57.339 | 30.769 | 0.00 | 0.00 | 0.00 | 1.75 |
3955 | 11845 | 5.674525 | TCAATACTGGTGATTGATGTCCTC | 58.325 | 41.667 | 0.00 | 0.00 | 38.17 | 3.71 |
4064 | 11956 | 9.477484 | ACGGACAACTGATTCAAGTATATTATC | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
4119 | 12012 | 1.597027 | CCGGGTTATCGATGTGGCC | 60.597 | 63.158 | 8.54 | 0.00 | 0.00 | 5.36 |
4208 | 12105 | 5.221803 | TGTTATTTTGCATGAAACCACCCAT | 60.222 | 36.000 | 0.00 | 0.00 | 0.00 | 4.00 |
4285 | 12185 | 8.765488 | TGATATGGAGGCTTTAATCAATTTCA | 57.235 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
4291 | 12191 | 8.428063 | TGGAGGCTTTAATCAATTTCAAGAAAA | 58.572 | 29.630 | 0.00 | 0.00 | 33.56 | 2.29 |
4318 | 12218 | 2.163818 | CAAGACGTGCTGGTCCTTTA | 57.836 | 50.000 | 0.00 | 0.00 | 37.66 | 1.85 |
4329 | 12229 | 3.128764 | GCTGGTCCTTTATACAACAAGCC | 59.871 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
4330 | 12230 | 3.692690 | TGGTCCTTTATACAACAAGCCC | 58.307 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
4369 | 12389 | 2.969628 | TCTCTTCGATTTGGAGAGCC | 57.030 | 50.000 | 4.47 | 0.00 | 33.04 | 4.70 |
4397 | 12417 | 7.383843 | GGGTTGATAACATTGTTTACAAAGGTG | 59.616 | 37.037 | 7.45 | 0.00 | 39.55 | 4.00 |
4579 | 12602 | 7.680442 | TTATATGTGCAAGCAAAACTCTGTA | 57.320 | 32.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4627 | 12651 | 2.592287 | GGTTTCGCCGGGTGTGAA | 60.592 | 61.111 | 2.18 | 1.06 | 41.59 | 3.18 |
4628 | 12652 | 2.635338 | GTTTCGCCGGGTGTGAAC | 59.365 | 61.111 | 2.18 | 10.07 | 42.94 | 3.18 |
4636 | 12660 | 1.507141 | CCGGGTGTGAACTGTGAAGC | 61.507 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
4643 | 12667 | 4.285292 | GTGTGAACTGTGAAGCAATCAAG | 58.715 | 43.478 | 0.00 | 0.00 | 40.50 | 3.02 |
4670 | 12697 | 5.755375 | GCTACTTTTCCATCATTGATCGAGA | 59.245 | 40.000 | 0.00 | 0.00 | 0.00 | 4.04 |
4733 | 12760 | 8.551682 | AAGGCCCATGAATTATTCAATCTAAA | 57.448 | 30.769 | 11.88 | 0.00 | 43.95 | 1.85 |
5058 | 13111 | 8.113062 | CGCAACAAAATTTGAAACATGAAAGTA | 58.887 | 29.630 | 13.19 | 0.00 | 0.00 | 2.24 |
5172 | 13230 | 7.331687 | GGGAACATGTGTTGAAAATTCATAAGG | 59.668 | 37.037 | 0.00 | 0.00 | 38.56 | 2.69 |
5260 | 13326 | 5.820926 | TTTTCGAATTTGGAGCATTTTCG | 57.179 | 34.783 | 0.00 | 0.00 | 40.23 | 3.46 |
5263 | 13329 | 4.722194 | TCGAATTTGGAGCATTTTCGAAG | 58.278 | 39.130 | 0.00 | 0.00 | 43.43 | 3.79 |
5486 | 13589 | 6.770303 | AGAGGAAGGAGCATAAAAATAGAAGC | 59.230 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
5508 | 13611 | 7.120789 | AGCAAAACACAGAAACAAAGAAAAG | 57.879 | 32.000 | 0.00 | 0.00 | 0.00 | 2.27 |
5509 | 13612 | 5.790003 | GCAAAACACAGAAACAAAGAAAAGC | 59.210 | 36.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5532 | 13635 | 1.762708 | CCAGCCCATTATCGGTTGTT | 58.237 | 50.000 | 0.00 | 0.00 | 30.11 | 2.83 |
5557 | 13660 | 2.413837 | ACGAAGCTGCGACTATTTGTT | 58.586 | 42.857 | 24.02 | 0.00 | 34.83 | 2.83 |
5587 | 13690 | 6.831353 | TGTGTGAAAAATAGAACTTTCCCAGA | 59.169 | 34.615 | 0.00 | 0.00 | 31.75 | 3.86 |
5778 | 13885 | 5.237705 | GCGAAATGCGTTTTGCTTTATTAC | 58.762 | 37.500 | 28.90 | 4.98 | 46.64 | 1.89 |
5781 | 13888 | 7.588834 | CGAAATGCGTTTTGCTTTATTACTAC | 58.411 | 34.615 | 5.17 | 0.00 | 46.63 | 2.73 |
5785 | 13892 | 6.524490 | TGCGTTTTGCTTTATTACTACGTAC | 58.476 | 36.000 | 0.00 | 0.00 | 46.63 | 3.67 |
5787 | 13894 | 7.148606 | TGCGTTTTGCTTTATTACTACGTACAT | 60.149 | 33.333 | 0.00 | 0.00 | 46.63 | 2.29 |
5869 | 13976 | 8.960591 | CAATGGTTGGATAAGTCAAGTATCTTT | 58.039 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
5927 | 16770 | 7.437748 | ACATCTTATATTTTGAGACGGAGGAG | 58.562 | 38.462 | 0.00 | 0.00 | 0.00 | 3.69 |
5931 | 16774 | 7.558807 | TCTTATATTTTGAGACGGAGGAGTGTA | 59.441 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
5933 | 16776 | 4.884668 | TTTTGAGACGGAGGAGTGTAAT | 57.115 | 40.909 | 0.00 | 0.00 | 0.00 | 1.89 |
5934 | 16777 | 4.884668 | TTTGAGACGGAGGAGTGTAATT | 57.115 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
5937 | 16780 | 5.320549 | TGAGACGGAGGAGTGTAATTAAC | 57.679 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
5938 | 16781 | 4.159135 | TGAGACGGAGGAGTGTAATTAACC | 59.841 | 45.833 | 0.00 | 0.00 | 0.00 | 2.85 |
5939 | 16782 | 4.351127 | AGACGGAGGAGTGTAATTAACCT | 58.649 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
5945 | 16788 | 5.990668 | GAGGAGTGTAATTAACCTCCACAT | 58.009 | 41.667 | 23.69 | 10.86 | 43.08 | 3.21 |
5950 | 16793 | 7.608761 | GGAGTGTAATTAACCTCCACATTGTAA | 59.391 | 37.037 | 19.68 | 0.00 | 41.57 | 2.41 |
5957 | 16800 | 3.921677 | ACCTCCACATTGTAACGTACAG | 58.078 | 45.455 | 0.00 | 0.00 | 40.24 | 2.74 |
5959 | 16802 | 2.671396 | CTCCACATTGTAACGTACAGGC | 59.329 | 50.000 | 0.00 | 0.00 | 40.24 | 4.85 |
5960 | 16803 | 1.392168 | CCACATTGTAACGTACAGGCG | 59.608 | 52.381 | 0.00 | 0.00 | 40.24 | 5.52 |
5962 | 16805 | 1.001181 | ACATTGTAACGTACAGGCGGT | 59.999 | 47.619 | 0.00 | 0.00 | 40.24 | 5.68 |
5963 | 16806 | 1.657094 | CATTGTAACGTACAGGCGGTC | 59.343 | 52.381 | 0.00 | 0.00 | 40.24 | 4.79 |
5964 | 16807 | 0.387112 | TTGTAACGTACAGGCGGTCG | 60.387 | 55.000 | 0.00 | 0.70 | 40.24 | 4.79 |
5965 | 16808 | 2.154569 | GTAACGTACAGGCGGTCGC | 61.155 | 63.158 | 6.83 | 6.83 | 41.06 | 5.19 |
5966 | 16809 | 2.624868 | TAACGTACAGGCGGTCGCA | 61.625 | 57.895 | 17.21 | 0.00 | 44.11 | 5.10 |
5967 | 16810 | 1.936436 | TAACGTACAGGCGGTCGCAT | 61.936 | 55.000 | 17.21 | 7.24 | 44.11 | 4.73 |
5968 | 16811 | 2.954868 | CGTACAGGCGGTCGCATC | 60.955 | 66.667 | 17.21 | 0.67 | 44.11 | 3.91 |
5969 | 16812 | 2.585247 | GTACAGGCGGTCGCATCC | 60.585 | 66.667 | 17.21 | 0.00 | 44.11 | 3.51 |
5971 | 16814 | 2.355986 | TACAGGCGGTCGCATCCTT | 61.356 | 57.895 | 17.21 | 0.00 | 44.11 | 3.36 |
5972 | 16815 | 2.292794 | TACAGGCGGTCGCATCCTTC | 62.293 | 60.000 | 17.21 | 0.00 | 44.11 | 3.46 |
5973 | 16816 | 4.162690 | AGGCGGTCGCATCCTTCC | 62.163 | 66.667 | 17.21 | 0.00 | 44.11 | 3.46 |
5976 | 16819 | 4.514577 | CGGTCGCATCCTTCCGCT | 62.515 | 66.667 | 0.00 | 0.00 | 36.68 | 5.52 |
5977 | 16820 | 2.586357 | GGTCGCATCCTTCCGCTC | 60.586 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
5979 | 16822 | 2.759973 | TCGCATCCTTCCGCTCCT | 60.760 | 61.111 | 0.00 | 0.00 | 0.00 | 3.69 |
5980 | 16823 | 2.587194 | CGCATCCTTCCGCTCCTG | 60.587 | 66.667 | 0.00 | 0.00 | 0.00 | 3.86 |
5981 | 16824 | 2.586792 | GCATCCTTCCGCTCCTGT | 59.413 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
5983 | 16826 | 1.144936 | CATCCTTCCGCTCCTGTCC | 59.855 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
5985 | 16828 | 3.382832 | CCTTCCGCTCCTGTCCGT | 61.383 | 66.667 | 0.00 | 0.00 | 0.00 | 4.69 |
5986 | 16829 | 2.182030 | CTTCCGCTCCTGTCCGTC | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 4.79 |
5987 | 16830 | 2.599281 | TTCCGCTCCTGTCCGTCA | 60.599 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
5989 | 16832 | 3.062466 | CCGCTCCTGTCCGTCAGA | 61.062 | 66.667 | 6.45 | 0.00 | 46.27 | 3.27 |
5990 | 16833 | 2.636412 | CCGCTCCTGTCCGTCAGAA | 61.636 | 63.158 | 6.45 | 0.00 | 46.27 | 3.02 |
5991 | 16834 | 1.289066 | CGCTCCTGTCCGTCAGAAA | 59.711 | 57.895 | 6.45 | 0.00 | 46.27 | 2.52 |
5992 | 16835 | 0.108615 | CGCTCCTGTCCGTCAGAAAT | 60.109 | 55.000 | 6.45 | 0.00 | 46.27 | 2.17 |
5993 | 16836 | 1.134367 | CGCTCCTGTCCGTCAGAAATA | 59.866 | 52.381 | 6.45 | 0.00 | 46.27 | 1.40 |
5994 | 16837 | 2.416836 | CGCTCCTGTCCGTCAGAAATAA | 60.417 | 50.000 | 6.45 | 0.00 | 46.27 | 1.40 |
5995 | 16838 | 3.738281 | CGCTCCTGTCCGTCAGAAATAAT | 60.738 | 47.826 | 6.45 | 0.00 | 46.27 | 1.28 |
5996 | 16839 | 3.557595 | GCTCCTGTCCGTCAGAAATAATG | 59.442 | 47.826 | 6.45 | 0.00 | 46.27 | 1.90 |
5998 | 16841 | 4.503910 | TCCTGTCCGTCAGAAATAATGTG | 58.496 | 43.478 | 6.45 | 0.00 | 46.27 | 3.21 |
5999 | 16842 | 4.020573 | TCCTGTCCGTCAGAAATAATGTGT | 60.021 | 41.667 | 6.45 | 0.00 | 46.27 | 3.72 |
6000 | 16843 | 4.330074 | CCTGTCCGTCAGAAATAATGTGTC | 59.670 | 45.833 | 6.45 | 0.00 | 46.27 | 3.67 |
6002 | 16845 | 3.925688 | CCGTCAGAAATAATGTGTCGG | 57.074 | 47.619 | 0.00 | 0.00 | 44.62 | 4.79 |
6003 | 16846 | 3.259064 | CCGTCAGAAATAATGTGTCGGT | 58.741 | 45.455 | 3.78 | 0.00 | 44.83 | 4.69 |
6004 | 16847 | 3.682858 | CCGTCAGAAATAATGTGTCGGTT | 59.317 | 43.478 | 3.78 | 0.00 | 44.83 | 4.44 |
6005 | 16848 | 4.435518 | CCGTCAGAAATAATGTGTCGGTTG | 60.436 | 45.833 | 3.78 | 0.00 | 44.83 | 3.77 |
6007 | 16850 | 5.063438 | CGTCAGAAATAATGTGTCGGTTGAT | 59.937 | 40.000 | 0.00 | 0.00 | 31.89 | 2.57 |
6009 | 16852 | 5.030295 | CAGAAATAATGTGTCGGTTGATGC | 58.970 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
6011 | 16922 | 2.087501 | TAATGTGTCGGTTGATGCGT | 57.912 | 45.000 | 0.00 | 0.00 | 0.00 | 5.24 |
6013 | 16924 | 0.037326 | ATGTGTCGGTTGATGCGTCT | 60.037 | 50.000 | 7.58 | 0.00 | 0.00 | 4.18 |
6017 | 16928 | 1.542472 | TGTCGGTTGATGCGTCTCTTA | 59.458 | 47.619 | 7.58 | 0.00 | 0.00 | 2.10 |
6018 | 16929 | 2.029739 | TGTCGGTTGATGCGTCTCTTAA | 60.030 | 45.455 | 7.58 | 0.00 | 0.00 | 1.85 |
6019 | 16930 | 2.991190 | GTCGGTTGATGCGTCTCTTAAA | 59.009 | 45.455 | 7.58 | 0.00 | 0.00 | 1.52 |
6022 | 16933 | 3.304559 | CGGTTGATGCGTCTCTTAAAGAG | 59.695 | 47.826 | 7.58 | 0.00 | 43.64 | 2.85 |
6042 | 16953 | 4.106663 | AGAGATATACTCCCTCCGTTCCTT | 59.893 | 45.833 | 0.00 | 0.00 | 45.96 | 3.36 |
6045 | 16956 | 6.563163 | AGATATACTCCCTCCGTTCCTTAAT | 58.437 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
6047 | 16958 | 8.345306 | AGATATACTCCCTCCGTTCCTTAATAT | 58.655 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
6048 | 16959 | 9.638176 | GATATACTCCCTCCGTTCCTTAATATA | 57.362 | 37.037 | 0.00 | 0.00 | 0.00 | 0.86 |
6051 | 16962 | 5.543020 | ACTCCCTCCGTTCCTTAATATAAGG | 59.457 | 44.000 | 9.44 | 9.44 | 38.78 | 2.69 |
6052 | 16963 | 5.470501 | TCCCTCCGTTCCTTAATATAAGGT | 58.529 | 41.667 | 14.18 | 0.00 | 38.55 | 3.50 |
6053 | 16964 | 5.306160 | TCCCTCCGTTCCTTAATATAAGGTG | 59.694 | 44.000 | 14.18 | 7.21 | 38.55 | 4.00 |
6054 | 16965 | 5.071384 | CCCTCCGTTCCTTAATATAAGGTGT | 59.929 | 44.000 | 14.18 | 0.00 | 38.55 | 4.16 |
6055 | 16966 | 6.268387 | CCCTCCGTTCCTTAATATAAGGTGTA | 59.732 | 42.308 | 14.18 | 1.67 | 38.55 | 2.90 |
6056 | 16967 | 7.038516 | CCCTCCGTTCCTTAATATAAGGTGTAT | 60.039 | 40.741 | 14.18 | 0.00 | 38.55 | 2.29 |
6057 | 16968 | 8.373220 | CCTCCGTTCCTTAATATAAGGTGTATT | 58.627 | 37.037 | 14.18 | 0.00 | 38.55 | 1.89 |
6074 | 16985 | 8.485578 | AGGTGTATTATTTTCCCAAAAAGTCA | 57.514 | 30.769 | 0.00 | 0.00 | 37.76 | 3.41 |
6076 | 16987 | 9.549078 | GGTGTATTATTTTCCCAAAAAGTCAAA | 57.451 | 29.630 | 0.00 | 0.00 | 37.76 | 2.69 |
6082 | 16993 | 9.594478 | TTATTTTCCCAAAAAGTCAAACTTCTC | 57.406 | 29.630 | 0.00 | 0.00 | 37.47 | 2.87 |
6084 | 16995 | 7.948034 | TTTCCCAAAAAGTCAAACTTCTCTA | 57.052 | 32.000 | 0.00 | 0.00 | 37.47 | 2.43 |
6085 | 16996 | 7.948034 | TTCCCAAAAAGTCAAACTTCTCTAA | 57.052 | 32.000 | 0.00 | 0.00 | 37.47 | 2.10 |
6105 | 17016 | 9.924650 | TCTCTAAGTTTGACCAAGTTTATAGAC | 57.075 | 33.333 | 0.00 | 0.00 | 30.16 | 2.59 |
6106 | 17017 | 9.706691 | CTCTAAGTTTGACCAAGTTTATAGACA | 57.293 | 33.333 | 0.00 | 0.00 | 30.16 | 3.41 |
6159 | 17070 | 9.097946 | TCATTATCACTAGATTCATCATGGACT | 57.902 | 33.333 | 0.00 | 0.00 | 35.67 | 3.85 |
6232 | 17582 | 9.485206 | TTCCTGTAAAGTTAGTCAAACATAGAC | 57.515 | 33.333 | 0.00 | 0.00 | 40.83 | 2.59 |
6233 | 17583 | 8.644216 | TCCTGTAAAGTTAGTCAAACATAGACA | 58.356 | 33.333 | 0.00 | 0.00 | 40.83 | 3.41 |
6234 | 17584 | 9.268268 | CCTGTAAAGTTAGTCAAACATAGACAA | 57.732 | 33.333 | 0.00 | 0.00 | 40.83 | 3.18 |
6236 | 17586 | 9.602568 | TGTAAAGTTAGTCAAACATAGACAACA | 57.397 | 29.630 | 0.00 | 0.00 | 40.83 | 3.33 |
6238 | 17588 | 8.732746 | AAAGTTAGTCAAACATAGACAACAGT | 57.267 | 30.769 | 0.00 | 0.00 | 40.83 | 3.55 |
6239 | 17589 | 8.732746 | AAGTTAGTCAAACATAGACAACAGTT | 57.267 | 30.769 | 0.00 | 0.00 | 40.83 | 3.16 |
6240 | 17590 | 8.142994 | AGTTAGTCAAACATAGACAACAGTTG | 57.857 | 34.615 | 12.03 | 12.03 | 40.83 | 3.16 |
6241 | 17591 | 7.985184 | AGTTAGTCAAACATAGACAACAGTTGA | 59.015 | 33.333 | 20.56 | 0.00 | 40.83 | 3.18 |
6242 | 17592 | 6.604735 | AGTCAAACATAGACAACAGTTGAC | 57.395 | 37.500 | 20.56 | 13.83 | 38.46 | 3.18 |
6243 | 17593 | 6.349300 | AGTCAAACATAGACAACAGTTGACT | 58.651 | 36.000 | 20.56 | 20.20 | 38.46 | 3.41 |
6244 | 17594 | 6.823689 | AGTCAAACATAGACAACAGTTGACTT | 59.176 | 34.615 | 20.98 | 8.54 | 38.46 | 3.01 |
6245 | 17595 | 7.336931 | AGTCAAACATAGACAACAGTTGACTTT | 59.663 | 33.333 | 20.98 | 12.16 | 38.46 | 2.66 |
6246 | 17596 | 7.968405 | GTCAAACATAGACAACAGTTGACTTTT | 59.032 | 33.333 | 20.98 | 13.60 | 36.98 | 2.27 |
6247 | 17597 | 8.519526 | TCAAACATAGACAACAGTTGACTTTTT | 58.480 | 29.630 | 20.98 | 15.03 | 36.98 | 1.94 |
6248 | 17598 | 9.781834 | CAAACATAGACAACAGTTGACTTTTTA | 57.218 | 29.630 | 20.98 | 6.09 | 36.98 | 1.52 |
6282 | 17632 | 6.170846 | ACACCTTATATTTAGGAACGGAGG | 57.829 | 41.667 | 9.82 | 0.00 | 36.58 | 4.30 |
6283 | 17633 | 5.071384 | ACACCTTATATTTAGGAACGGAGGG | 59.929 | 44.000 | 9.82 | 0.00 | 36.58 | 4.30 |
6284 | 17634 | 5.306160 | CACCTTATATTTAGGAACGGAGGGA | 59.694 | 44.000 | 9.82 | 0.00 | 36.58 | 4.20 |
6285 | 17635 | 5.543020 | ACCTTATATTTAGGAACGGAGGGAG | 59.457 | 44.000 | 9.82 | 0.00 | 36.58 | 4.30 |
6286 | 17636 | 5.543020 | CCTTATATTTAGGAACGGAGGGAGT | 59.457 | 44.000 | 0.00 | 0.00 | 34.56 | 3.85 |
6287 | 17637 | 6.723052 | CCTTATATTTAGGAACGGAGGGAGTA | 59.277 | 42.308 | 0.00 | 0.00 | 34.56 | 2.59 |
6288 | 17638 | 7.399478 | CCTTATATTTAGGAACGGAGGGAGTAT | 59.601 | 40.741 | 0.00 | 0.00 | 34.56 | 2.12 |
6289 | 17639 | 9.471702 | CTTATATTTAGGAACGGAGGGAGTATA | 57.528 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
6291 | 17641 | 8.912614 | ATATTTAGGAACGGAGGGAGTATATT | 57.087 | 34.615 | 0.00 | 0.00 | 0.00 | 1.28 |
6292 | 17642 | 6.415206 | TTTAGGAACGGAGGGAGTATATTG | 57.585 | 41.667 | 0.00 | 0.00 | 0.00 | 1.90 |
6293 | 17643 | 3.924922 | AGGAACGGAGGGAGTATATTGT | 58.075 | 45.455 | 0.00 | 0.00 | 0.00 | 2.71 |
6294 | 17644 | 5.070823 | AGGAACGGAGGGAGTATATTGTA | 57.929 | 43.478 | 0.00 | 0.00 | 0.00 | 2.41 |
6295 | 17645 | 5.461327 | AGGAACGGAGGGAGTATATTGTAA | 58.539 | 41.667 | 0.00 | 0.00 | 0.00 | 2.41 |
6296 | 17646 | 5.901276 | AGGAACGGAGGGAGTATATTGTAAA | 59.099 | 40.000 | 0.00 | 0.00 | 0.00 | 2.01 |
6297 | 17647 | 5.987953 | GGAACGGAGGGAGTATATTGTAAAC | 59.012 | 44.000 | 0.00 | 0.00 | 0.00 | 2.01 |
6298 | 17648 | 6.407299 | GGAACGGAGGGAGTATATTGTAAACA | 60.407 | 42.308 | 0.00 | 0.00 | 0.00 | 2.83 |
6299 | 17649 | 6.742559 | ACGGAGGGAGTATATTGTAAACAT | 57.257 | 37.500 | 0.00 | 0.00 | 0.00 | 2.71 |
6300 | 17650 | 6.522054 | ACGGAGGGAGTATATTGTAAACATG | 58.478 | 40.000 | 0.00 | 0.00 | 0.00 | 3.21 |
6301 | 17651 | 5.932303 | CGGAGGGAGTATATTGTAAACATGG | 59.068 | 44.000 | 0.00 | 0.00 | 0.00 | 3.66 |
6302 | 17652 | 5.705905 | GGAGGGAGTATATTGTAAACATGGC | 59.294 | 44.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6303 | 17653 | 6.260700 | AGGGAGTATATTGTAAACATGGCA | 57.739 | 37.500 | 0.00 | 0.00 | 0.00 | 4.92 |
6304 | 17654 | 6.852404 | AGGGAGTATATTGTAAACATGGCAT | 58.148 | 36.000 | 0.00 | 0.00 | 0.00 | 4.40 |
6305 | 17655 | 7.297614 | AGGGAGTATATTGTAAACATGGCATT | 58.702 | 34.615 | 0.00 | 0.00 | 0.00 | 3.56 |
6306 | 17656 | 8.444783 | AGGGAGTATATTGTAAACATGGCATTA | 58.555 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
6307 | 17657 | 9.073475 | GGGAGTATATTGTAAACATGGCATTAA | 57.927 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
15 | 16 | 1.153549 | CCAGTTCCTCTGCTACGGC | 60.154 | 63.158 | 0.00 | 0.00 | 42.38 | 5.68 |
133 | 134 | 9.969001 | AAACTAGTCCATTTTGCCTATACTTTA | 57.031 | 29.630 | 0.00 | 0.00 | 0.00 | 1.85 |
142 | 144 | 6.423905 | GGAAAGAAAAACTAGTCCATTTTGCC | 59.576 | 38.462 | 8.19 | 0.82 | 34.76 | 4.52 |
247 | 252 | 4.999950 | AGATTACTGAGGTTGCAAGACAAG | 59.000 | 41.667 | 0.00 | 0.00 | 39.50 | 3.16 |
259 | 264 | 8.522542 | ACCAAGTACTAGTTAGATTACTGAGG | 57.477 | 38.462 | 0.00 | 6.12 | 31.55 | 3.86 |
297 | 369 | 3.043713 | CGGAGCTCGCAGTTTGCA | 61.044 | 61.111 | 7.83 | 0.00 | 45.36 | 4.08 |
300 | 372 | 2.048127 | GACCGGAGCTCGCAGTTT | 60.048 | 61.111 | 9.46 | 0.00 | 37.59 | 2.66 |
306 | 378 | 3.518998 | ACCATCGACCGGAGCTCG | 61.519 | 66.667 | 9.46 | 7.72 | 38.88 | 5.03 |
437 | 517 | 6.041637 | AGCGAAATTGTATGTAGAGGTATCCA | 59.958 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
504 | 584 | 1.678425 | CCTTCAGCCTGCTTCTTCTCC | 60.678 | 57.143 | 0.00 | 0.00 | 0.00 | 3.71 |
507 | 587 | 1.736612 | CTCCTTCAGCCTGCTTCTTC | 58.263 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
524 | 604 | 3.925913 | CAGTCTTCAGTTCTTGCTAGCTC | 59.074 | 47.826 | 17.23 | 1.66 | 0.00 | 4.09 |
541 | 621 | 8.352942 | GTTTGGTAAAAGAATCATTGACAGTCT | 58.647 | 33.333 | 1.31 | 0.00 | 0.00 | 3.24 |
543 | 623 | 7.433680 | GGTTTGGTAAAAGAATCATTGACAGT | 58.566 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
544 | 624 | 6.868339 | GGGTTTGGTAAAAGAATCATTGACAG | 59.132 | 38.462 | 0.00 | 0.00 | 0.00 | 3.51 |
549 | 643 | 6.994421 | ACAGGGTTTGGTAAAAGAATCATT | 57.006 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
550 | 644 | 6.782494 | AGAACAGGGTTTGGTAAAAGAATCAT | 59.218 | 34.615 | 0.00 | 0.00 | 0.00 | 2.45 |
562 | 656 | 0.178992 | TCAGCCAGAACAGGGTTTGG | 60.179 | 55.000 | 0.00 | 0.00 | 37.26 | 3.28 |
596 | 699 | 4.149511 | TCGATTTCAGGTATGCCATTCA | 57.850 | 40.909 | 1.54 | 0.00 | 37.19 | 2.57 |
598 | 701 | 4.780815 | TCTTCGATTTCAGGTATGCCATT | 58.219 | 39.130 | 1.54 | 0.00 | 37.19 | 3.16 |
601 | 704 | 6.146347 | GTCTATTCTTCGATTTCAGGTATGCC | 59.854 | 42.308 | 0.00 | 0.00 | 0.00 | 4.40 |
606 | 709 | 6.477033 | CGATTGTCTATTCTTCGATTTCAGGT | 59.523 | 38.462 | 0.00 | 0.00 | 31.74 | 4.00 |
636 | 739 | 1.064946 | GGAGACAGATGGCGAGTCG | 59.935 | 63.158 | 8.54 | 8.54 | 37.36 | 4.18 |
665 | 768 | 6.575083 | AGAAACATAACGAATCATGTCGAG | 57.425 | 37.500 | 12.18 | 2.82 | 43.86 | 4.04 |
680 | 784 | 8.183104 | ACGGATCAGATCAGATAAGAAACATA | 57.817 | 34.615 | 16.59 | 0.00 | 0.00 | 2.29 |
687 | 791 | 5.919707 | CAGACAACGGATCAGATCAGATAAG | 59.080 | 44.000 | 16.59 | 1.26 | 0.00 | 1.73 |
702 | 806 | 1.275657 | GTGCGTGTTCAGACAACGG | 59.724 | 57.895 | 6.27 | 0.00 | 37.57 | 4.44 |
762 | 866 | 1.067495 | CCTCGTTCTCAACAGAGGTCC | 60.067 | 57.143 | 14.20 | 0.00 | 42.21 | 4.46 |
763 | 867 | 1.067495 | CCCTCGTTCTCAACAGAGGTC | 60.067 | 57.143 | 17.96 | 0.10 | 43.90 | 3.85 |
764 | 868 | 0.969894 | CCCTCGTTCTCAACAGAGGT | 59.030 | 55.000 | 17.96 | 0.00 | 43.90 | 3.85 |
770 | 874 | 6.456501 | AGTATATATTGCCCTCGTTCTCAAC | 58.543 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
833 | 937 | 6.663734 | TCTATCTGACCAAGTCTATCTGTGA | 58.336 | 40.000 | 0.00 | 0.00 | 33.15 | 3.58 |
844 | 948 | 3.877559 | TGTTGCCATCTATCTGACCAAG | 58.122 | 45.455 | 0.00 | 0.00 | 0.00 | 3.61 |
845 | 949 | 3.998913 | TGTTGCCATCTATCTGACCAA | 57.001 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
846 | 950 | 4.655649 | ACTATGTTGCCATCTATCTGACCA | 59.344 | 41.667 | 0.00 | 0.00 | 32.29 | 4.02 |
847 | 951 | 5.220710 | ACTATGTTGCCATCTATCTGACC | 57.779 | 43.478 | 0.00 | 0.00 | 32.29 | 4.02 |
848 | 952 | 7.517417 | CGAAAACTATGTTGCCATCTATCTGAC | 60.517 | 40.741 | 0.00 | 0.00 | 32.29 | 3.51 |
849 | 953 | 6.479990 | CGAAAACTATGTTGCCATCTATCTGA | 59.520 | 38.462 | 0.00 | 0.00 | 32.29 | 3.27 |
850 | 954 | 6.258727 | ACGAAAACTATGTTGCCATCTATCTG | 59.741 | 38.462 | 0.00 | 0.00 | 32.29 | 2.90 |
851 | 955 | 6.349300 | ACGAAAACTATGTTGCCATCTATCT | 58.651 | 36.000 | 0.00 | 0.00 | 32.29 | 1.98 |
852 | 956 | 6.562270 | CGACGAAAACTATGTTGCCATCTATC | 60.562 | 42.308 | 0.00 | 0.00 | 32.29 | 2.08 |
853 | 957 | 5.234329 | CGACGAAAACTATGTTGCCATCTAT | 59.766 | 40.000 | 0.00 | 0.00 | 32.29 | 1.98 |
854 | 958 | 4.565166 | CGACGAAAACTATGTTGCCATCTA | 59.435 | 41.667 | 0.00 | 0.00 | 32.29 | 1.98 |
855 | 959 | 3.370978 | CGACGAAAACTATGTTGCCATCT | 59.629 | 43.478 | 0.00 | 0.00 | 32.29 | 2.90 |
856 | 960 | 3.670203 | CGACGAAAACTATGTTGCCATC | 58.330 | 45.455 | 0.00 | 0.00 | 32.29 | 3.51 |
857 | 961 | 2.159572 | GCGACGAAAACTATGTTGCCAT | 60.160 | 45.455 | 0.00 | 0.00 | 37.10 | 4.40 |
858 | 962 | 1.195900 | GCGACGAAAACTATGTTGCCA | 59.804 | 47.619 | 0.00 | 0.00 | 37.10 | 4.92 |
859 | 963 | 1.878373 | GCGACGAAAACTATGTTGCC | 58.122 | 50.000 | 0.00 | 0.00 | 37.10 | 4.52 |
860 | 964 | 1.463444 | AGGCGACGAAAACTATGTTGC | 59.537 | 47.619 | 0.00 | 0.00 | 41.32 | 4.17 |
861 | 965 | 6.764877 | ATATAGGCGACGAAAACTATGTTG | 57.235 | 37.500 | 0.00 | 0.00 | 0.00 | 3.33 |
862 | 966 | 7.594015 | CACTATATAGGCGACGAAAACTATGTT | 59.406 | 37.037 | 14.25 | 0.00 | 0.00 | 2.71 |
874 | 978 | 6.073765 | CCAAATGACAACACTATATAGGCGAC | 60.074 | 42.308 | 14.25 | 0.00 | 0.00 | 5.19 |
877 | 981 | 5.765182 | AGCCAAATGACAACACTATATAGGC | 59.235 | 40.000 | 14.25 | 4.00 | 36.22 | 3.93 |
905 | 1010 | 0.310854 | CCGTCAAACAGCAAGGGTTC | 59.689 | 55.000 | 0.00 | 0.00 | 0.00 | 3.62 |
913 | 1020 | 0.593128 | AGCAATGTCCGTCAAACAGC | 59.407 | 50.000 | 0.00 | 0.00 | 0.00 | 4.40 |
936 | 1043 | 2.159114 | TGATCTCGACGATGAAATGGCA | 60.159 | 45.455 | 0.00 | 0.00 | 30.84 | 4.92 |
964 | 1071 | 5.511363 | ACAAGCTCGGCCTATATACTCTAT | 58.489 | 41.667 | 0.00 | 0.00 | 0.00 | 1.98 |
965 | 1072 | 4.919793 | ACAAGCTCGGCCTATATACTCTA | 58.080 | 43.478 | 0.00 | 0.00 | 0.00 | 2.43 |
1014 | 1126 | 3.755628 | CGGCCATTTGCTGCAGCT | 61.756 | 61.111 | 36.61 | 16.83 | 40.07 | 4.24 |
1261 | 1400 | 4.329545 | GGCGCTGGGAGGAACACA | 62.330 | 66.667 | 7.64 | 0.00 | 0.00 | 3.72 |
1365 | 1510 | 2.034066 | CCAAGCCATCACCGGTGT | 59.966 | 61.111 | 32.74 | 18.15 | 0.00 | 4.16 |
1366 | 1511 | 3.443045 | GCCAAGCCATCACCGGTG | 61.443 | 66.667 | 29.26 | 29.26 | 0.00 | 4.94 |
1367 | 1512 | 2.786512 | AATGCCAAGCCATCACCGGT | 62.787 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
1372 | 1517 | 1.006281 | AGGAAGAATGCCAAGCCATCA | 59.994 | 47.619 | 0.00 | 0.00 | 34.43 | 3.07 |
1426 | 1571 | 2.279120 | CCGCTCATCTCACGCTCC | 60.279 | 66.667 | 0.00 | 0.00 | 0.00 | 4.70 |
1796 | 1944 | 1.153628 | GGTGTAGCTCGACCGCAAT | 60.154 | 57.895 | 0.00 | 0.00 | 0.00 | 3.56 |
1894 | 2081 | 6.919721 | AGTTATTATCTCTACTAGCAGCAGC | 58.080 | 40.000 | 0.00 | 0.00 | 42.56 | 5.25 |
1919 | 2124 | 6.299805 | TGCAATGACTCCAATAACTAGTCT | 57.700 | 37.500 | 0.00 | 0.00 | 40.25 | 3.24 |
1923 | 2128 | 7.176515 | ACACAATTGCAATGACTCCAATAACTA | 59.823 | 33.333 | 13.82 | 0.00 | 0.00 | 2.24 |
1972 | 2177 | 2.010145 | TTCTCGTGAATAGCTGCCAC | 57.990 | 50.000 | 0.00 | 0.37 | 0.00 | 5.01 |
2025 | 2230 | 5.630121 | CCAACCTATGATAACCAATAGGCA | 58.370 | 41.667 | 8.33 | 0.00 | 39.70 | 4.75 |
2102 | 3617 | 2.755103 | GTTGGCCCTCATAAACAGAAGG | 59.245 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2104 | 3619 | 3.806949 | AGTTGGCCCTCATAAACAGAA | 57.193 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
2125 | 3640 | 1.263356 | CCGGTCTACTTGGACTTCCA | 58.737 | 55.000 | 0.00 | 0.00 | 45.94 | 3.53 |
2127 | 3642 | 1.067071 | CCACCGGTCTACTTGGACTTC | 60.067 | 57.143 | 2.59 | 0.00 | 36.55 | 3.01 |
2165 | 3680 | 2.026641 | CCCCTCGCATGATGATGTTTT | 58.973 | 47.619 | 0.00 | 0.00 | 31.50 | 2.43 |
2223 | 3747 | 4.021925 | GGTTCCGGTGCCTGAGCT | 62.022 | 66.667 | 0.00 | 0.00 | 40.80 | 4.09 |
2553 | 9592 | 1.756538 | TGCTCGCAATCTACATGGAGA | 59.243 | 47.619 | 10.86 | 10.86 | 0.00 | 3.71 |
2727 | 9766 | 6.670464 | TGTTGAGGAACACAGGGTCTATATAA | 59.330 | 38.462 | 0.00 | 0.00 | 37.15 | 0.98 |
2775 | 9814 | 4.826733 | ACAATGCCAAAACTGTAGATGTCA | 59.173 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
2937 | 9976 | 2.335316 | TTTGTTGTCGCCCAGTACTT | 57.665 | 45.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3093 | 10141 | 4.368067 | ACTACAAAGGCTATGGTAGGGAA | 58.632 | 43.478 | 18.46 | 0.00 | 37.99 | 3.97 |
3122 | 10186 | 9.474313 | AATACATGTATGGTATTTCTTTGTGGT | 57.526 | 29.630 | 18.94 | 0.00 | 38.02 | 4.16 |
3211 | 10436 | 3.903876 | GTCATCATTTGACGCGCAT | 57.096 | 47.368 | 5.73 | 0.00 | 45.00 | 4.73 |
3352 | 10589 | 4.040461 | AGTGTACATGATTCCTATTCCCGG | 59.960 | 45.833 | 0.00 | 0.00 | 0.00 | 5.73 |
3371 | 10608 | 3.668447 | CACACATCCAGCTTTCTAGTGT | 58.332 | 45.455 | 0.00 | 0.00 | 39.09 | 3.55 |
3372 | 10609 | 2.417933 | GCACACATCCAGCTTTCTAGTG | 59.582 | 50.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3394 | 10714 | 0.531974 | TGACCTGTTGACGGCTTGAC | 60.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3395 | 10715 | 0.179234 | TTGACCTGTTGACGGCTTGA | 59.821 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3396 | 10716 | 0.307760 | GTTGACCTGTTGACGGCTTG | 59.692 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
3397 | 10717 | 0.180406 | AGTTGACCTGTTGACGGCTT | 59.820 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3398 | 10718 | 0.532862 | CAGTTGACCTGTTGACGGCT | 60.533 | 55.000 | 0.00 | 0.00 | 36.37 | 5.52 |
3399 | 10719 | 1.507141 | CCAGTTGACCTGTTGACGGC | 61.507 | 60.000 | 0.00 | 0.00 | 39.74 | 5.68 |
3400 | 10720 | 0.179056 | ACCAGTTGACCTGTTGACGG | 60.179 | 55.000 | 0.00 | 0.00 | 39.74 | 4.79 |
3401 | 10721 | 0.937304 | CACCAGTTGACCTGTTGACG | 59.063 | 55.000 | 0.00 | 0.00 | 35.72 | 4.35 |
3402 | 10722 | 2.325583 | TCACCAGTTGACCTGTTGAC | 57.674 | 50.000 | 0.00 | 0.00 | 37.65 | 3.18 |
3418 | 10738 | 0.605319 | TCTCAAATGTGCGGGGTCAC | 60.605 | 55.000 | 0.00 | 0.00 | 37.48 | 3.67 |
3444 | 10764 | 6.754209 | ACTTGTACTAGCATCGAAGAAATCTG | 59.246 | 38.462 | 4.10 | 0.00 | 43.58 | 2.90 |
3628 | 11495 | 6.472163 | GTGGCACAATATATGTACAAGCAAAC | 59.528 | 38.462 | 13.86 | 0.00 | 44.16 | 2.93 |
3659 | 11526 | 0.323178 | GATATGGGGGCTGGCAGATG | 60.323 | 60.000 | 20.86 | 0.00 | 0.00 | 2.90 |
3742 | 11612 | 5.187772 | TGATGCTACTCAAGGTGTGACTAAT | 59.812 | 40.000 | 0.00 | 0.00 | 31.13 | 1.73 |
3748 | 11618 | 6.108687 | TCTAAATGATGCTACTCAAGGTGTG | 58.891 | 40.000 | 0.00 | 0.00 | 0.00 | 3.82 |
3860 | 11736 | 6.784031 | AGGTGTTCCTTCTTTGATGTCTAAT | 58.216 | 36.000 | 0.00 | 0.00 | 42.12 | 1.73 |
3955 | 11845 | 5.276270 | CAATGATGAAGCGGGTCAATAAAG | 58.724 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
3997 | 11887 | 6.465948 | TGCATTGCATTCCACTAAAAGAATT | 58.534 | 32.000 | 7.38 | 0.00 | 31.71 | 2.17 |
4016 | 11906 | 5.251764 | GTGCCATAGAATCCTAGATGCATT | 58.748 | 41.667 | 0.00 | 0.00 | 32.80 | 3.56 |
4064 | 11956 | 6.515272 | AGGGTACATACAAAGCAGAATTTG | 57.485 | 37.500 | 0.00 | 0.00 | 44.14 | 2.32 |
4085 | 11977 | 2.770232 | ACCCGGTTAGAACTCCATTAGG | 59.230 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
4231 | 12128 | 8.018677 | TCGAAGAGAATCATTGTTTACTCAAC | 57.981 | 34.615 | 0.00 | 0.00 | 37.82 | 3.18 |
4233 | 12130 | 8.777865 | AATCGAAGAGAATCATTGTTTACTCA | 57.222 | 30.769 | 0.00 | 0.00 | 43.63 | 3.41 |
4284 | 12184 | 1.028905 | TCTTGCCGTGGGTTTTCTTG | 58.971 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
4285 | 12185 | 1.029681 | GTCTTGCCGTGGGTTTTCTT | 58.970 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
4307 | 12207 | 3.128764 | GGCTTGTTGTATAAAGGACCAGC | 59.871 | 47.826 | 0.00 | 0.00 | 32.00 | 4.85 |
4318 | 12218 | 2.437716 | CGGCCGGGCTTGTTGTAT | 60.438 | 61.111 | 27.04 | 0.00 | 0.00 | 2.29 |
4369 | 12389 | 7.598493 | CCTTTGTAAACAATGTTATCAACCCAG | 59.402 | 37.037 | 12.72 | 9.30 | 35.55 | 4.45 |
4579 | 12602 | 4.320608 | AATGTTCCTTTTTCACGTGCAT | 57.679 | 36.364 | 11.67 | 2.02 | 0.00 | 3.96 |
4622 | 12646 | 3.243168 | GCTTGATTGCTTCACAGTTCACA | 60.243 | 43.478 | 0.00 | 0.00 | 32.84 | 3.58 |
4623 | 12647 | 3.303406 | GCTTGATTGCTTCACAGTTCAC | 58.697 | 45.455 | 0.00 | 0.00 | 32.84 | 3.18 |
4624 | 12648 | 2.294233 | GGCTTGATTGCTTCACAGTTCA | 59.706 | 45.455 | 0.00 | 0.00 | 32.84 | 3.18 |
4625 | 12649 | 2.666619 | CGGCTTGATTGCTTCACAGTTC | 60.667 | 50.000 | 0.00 | 0.00 | 32.84 | 3.01 |
4626 | 12650 | 1.267806 | CGGCTTGATTGCTTCACAGTT | 59.732 | 47.619 | 0.00 | 0.00 | 32.84 | 3.16 |
4627 | 12651 | 0.877071 | CGGCTTGATTGCTTCACAGT | 59.123 | 50.000 | 0.00 | 0.00 | 32.84 | 3.55 |
4628 | 12652 | 0.455633 | GCGGCTTGATTGCTTCACAG | 60.456 | 55.000 | 0.00 | 0.00 | 32.84 | 3.66 |
4636 | 12660 | 2.487762 | TGGAAAAGTAGCGGCTTGATTG | 59.512 | 45.455 | 8.26 | 0.00 | 0.00 | 2.67 |
4643 | 12667 | 2.682856 | TCAATGATGGAAAAGTAGCGGC | 59.317 | 45.455 | 0.00 | 0.00 | 0.00 | 6.53 |
5172 | 13230 | 9.152595 | TGTTAAAAGGTACACATTTTCCAAAAC | 57.847 | 29.630 | 7.90 | 7.90 | 39.94 | 2.43 |
5463 | 13566 | 6.426587 | TGCTTCTATTTTTATGCTCCTTCCT | 58.573 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
5486 | 13589 | 6.008875 | CGCTTTTCTTTGTTTCTGTGTTTTG | 58.991 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
5532 | 13635 | 1.445871 | TAGTCGCAGCTTCGTACAGA | 58.554 | 50.000 | 5.50 | 0.00 | 0.00 | 3.41 |
5557 | 13660 | 3.563808 | AGTTCTATTTTTCACACAGCGCA | 59.436 | 39.130 | 11.47 | 0.00 | 0.00 | 6.09 |
5560 | 13663 | 5.920840 | GGGAAAGTTCTATTTTTCACACAGC | 59.079 | 40.000 | 0.21 | 0.00 | 36.84 | 4.40 |
5587 | 13690 | 2.433239 | ACTTAGATTTCGGCCCACGTAT | 59.567 | 45.455 | 0.00 | 0.00 | 44.69 | 3.06 |
5597 | 13700 | 1.017387 | GCCAGCCCACTTAGATTTCG | 58.983 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
5680 | 13787 | 7.095607 | CGAGGTGGTACTAAATTCTTATGCATC | 60.096 | 40.741 | 0.19 | 0.00 | 0.00 | 3.91 |
5720 | 13827 | 6.988622 | TCCGTTCACCGTCAAAAATAATAT | 57.011 | 33.333 | 0.00 | 0.00 | 33.66 | 1.28 |
5721 | 13828 | 6.594547 | TCATCCGTTCACCGTCAAAAATAATA | 59.405 | 34.615 | 0.00 | 0.00 | 33.66 | 0.98 |
5761 | 13868 | 5.594724 | ACGTAGTAATAAAGCAAAACGCA | 57.405 | 34.783 | 0.00 | 0.00 | 42.06 | 5.24 |
5836 | 13943 | 9.784531 | CTTGACTTATCCAACCATTGTATCTAT | 57.215 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
5837 | 13944 | 8.768397 | ACTTGACTTATCCAACCATTGTATCTA | 58.232 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
5838 | 13945 | 7.633789 | ACTTGACTTATCCAACCATTGTATCT | 58.366 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
5839 | 13946 | 7.865706 | ACTTGACTTATCCAACCATTGTATC | 57.134 | 36.000 | 0.00 | 0.00 | 0.00 | 2.24 |
5840 | 13947 | 9.561069 | GATACTTGACTTATCCAACCATTGTAT | 57.439 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
5859 | 13966 | 9.697250 | TTTGCGACGAATTAATAAAGATACTTG | 57.303 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
5900 | 14007 | 8.265055 | TCCTCCGTCTCAAAATATAAGATGTTT | 58.735 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
5901 | 14008 | 7.792032 | TCCTCCGTCTCAAAATATAAGATGTT | 58.208 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
5903 | 14010 | 7.383572 | CACTCCTCCGTCTCAAAATATAAGATG | 59.616 | 40.741 | 0.00 | 0.00 | 0.00 | 2.90 |
5904 | 14011 | 7.070074 | ACACTCCTCCGTCTCAAAATATAAGAT | 59.930 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
5905 | 14012 | 6.380274 | ACACTCCTCCGTCTCAAAATATAAGA | 59.620 | 38.462 | 0.00 | 0.00 | 0.00 | 2.10 |
5906 | 14013 | 6.574350 | ACACTCCTCCGTCTCAAAATATAAG | 58.426 | 40.000 | 0.00 | 0.00 | 0.00 | 1.73 |
5907 | 14014 | 6.540438 | ACACTCCTCCGTCTCAAAATATAA | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 0.98 |
5908 | 14015 | 7.649533 | TTACACTCCTCCGTCTCAAAATATA | 57.350 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
5909 | 14016 | 6.540438 | TTACACTCCTCCGTCTCAAAATAT | 57.460 | 37.500 | 0.00 | 0.00 | 0.00 | 1.28 |
5912 | 14019 | 4.884668 | ATTACACTCCTCCGTCTCAAAA | 57.115 | 40.909 | 0.00 | 0.00 | 0.00 | 2.44 |
5914 | 14021 | 5.337009 | GGTTAATTACACTCCTCCGTCTCAA | 60.337 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
5915 | 14022 | 4.159135 | GGTTAATTACACTCCTCCGTCTCA | 59.841 | 45.833 | 0.00 | 0.00 | 0.00 | 3.27 |
5918 | 14025 | 4.680702 | GAGGTTAATTACACTCCTCCGTC | 58.319 | 47.826 | 11.20 | 0.00 | 38.81 | 4.79 |
5919 | 14026 | 4.732672 | GAGGTTAATTACACTCCTCCGT | 57.267 | 45.455 | 11.20 | 0.00 | 38.81 | 4.69 |
5927 | 16770 | 7.095102 | ACGTTACAATGTGGAGGTTAATTACAC | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
5931 | 16774 | 6.935771 | TGTACGTTACAATGTGGAGGTTAATT | 59.064 | 34.615 | 0.00 | 0.00 | 35.38 | 1.40 |
5933 | 16776 | 5.851720 | TGTACGTTACAATGTGGAGGTTAA | 58.148 | 37.500 | 0.00 | 0.00 | 35.38 | 2.01 |
5934 | 16777 | 5.465532 | TGTACGTTACAATGTGGAGGTTA | 57.534 | 39.130 | 0.00 | 0.00 | 35.38 | 2.85 |
5937 | 16780 | 3.259064 | CCTGTACGTTACAATGTGGAGG | 58.741 | 50.000 | 0.00 | 0.00 | 38.38 | 4.30 |
5938 | 16781 | 2.671396 | GCCTGTACGTTACAATGTGGAG | 59.329 | 50.000 | 0.00 | 0.00 | 38.38 | 3.86 |
5939 | 16782 | 2.690786 | GCCTGTACGTTACAATGTGGA | 58.309 | 47.619 | 0.00 | 0.00 | 38.38 | 4.02 |
5941 | 16784 | 1.392168 | CCGCCTGTACGTTACAATGTG | 59.608 | 52.381 | 0.00 | 0.00 | 38.38 | 3.21 |
5945 | 16788 | 0.387112 | CGACCGCCTGTACGTTACAA | 60.387 | 55.000 | 0.00 | 0.00 | 38.38 | 2.41 |
5950 | 16793 | 3.695022 | GATGCGACCGCCTGTACGT | 62.695 | 63.158 | 12.08 | 0.00 | 41.09 | 3.57 |
5959 | 16802 | 4.514577 | AGCGGAAGGATGCGACCG | 62.515 | 66.667 | 17.25 | 17.25 | 43.91 | 4.79 |
5960 | 16803 | 2.586357 | GAGCGGAAGGATGCGACC | 60.586 | 66.667 | 0.00 | 0.00 | 43.91 | 4.79 |
5962 | 16805 | 2.759973 | AGGAGCGGAAGGATGCGA | 60.760 | 61.111 | 0.00 | 0.00 | 43.91 | 5.10 |
5963 | 16806 | 2.587194 | CAGGAGCGGAAGGATGCG | 60.587 | 66.667 | 0.00 | 0.00 | 44.03 | 4.73 |
5964 | 16807 | 1.522580 | GACAGGAGCGGAAGGATGC | 60.523 | 63.158 | 0.00 | 0.00 | 0.00 | 3.91 |
5965 | 16808 | 1.144936 | GGACAGGAGCGGAAGGATG | 59.855 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
5966 | 16809 | 2.427245 | CGGACAGGAGCGGAAGGAT | 61.427 | 63.158 | 0.00 | 0.00 | 0.00 | 3.24 |
5967 | 16810 | 3.068691 | CGGACAGGAGCGGAAGGA | 61.069 | 66.667 | 0.00 | 0.00 | 0.00 | 3.36 |
5968 | 16811 | 3.358076 | GACGGACAGGAGCGGAAGG | 62.358 | 68.421 | 0.00 | 0.00 | 0.00 | 3.46 |
5969 | 16812 | 2.182030 | GACGGACAGGAGCGGAAG | 59.818 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
5971 | 16814 | 3.062466 | CTGACGGACAGGAGCGGA | 61.062 | 66.667 | 0.00 | 0.00 | 42.39 | 5.54 |
5972 | 16815 | 2.154798 | TTTCTGACGGACAGGAGCGG | 62.155 | 60.000 | 7.58 | 0.00 | 45.76 | 5.52 |
5973 | 16816 | 0.108615 | ATTTCTGACGGACAGGAGCG | 60.109 | 55.000 | 7.58 | 0.00 | 45.76 | 5.03 |
5976 | 16819 | 4.020573 | ACACATTATTTCTGACGGACAGGA | 60.021 | 41.667 | 7.58 | 0.00 | 45.76 | 3.86 |
5977 | 16820 | 4.253685 | ACACATTATTTCTGACGGACAGG | 58.746 | 43.478 | 7.58 | 0.00 | 45.76 | 4.00 |
5979 | 16822 | 3.924073 | CGACACATTATTTCTGACGGACA | 59.076 | 43.478 | 0.00 | 0.00 | 0.00 | 4.02 |
5980 | 16823 | 3.306166 | CCGACACATTATTTCTGACGGAC | 59.694 | 47.826 | 0.00 | 0.00 | 40.16 | 4.79 |
5981 | 16824 | 3.056393 | ACCGACACATTATTTCTGACGGA | 60.056 | 43.478 | 13.30 | 0.00 | 40.78 | 4.69 |
5983 | 16826 | 4.387559 | TCAACCGACACATTATTTCTGACG | 59.612 | 41.667 | 0.00 | 0.00 | 0.00 | 4.35 |
5985 | 16828 | 5.163764 | GCATCAACCGACACATTATTTCTGA | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 3.27 |
5986 | 16829 | 5.030295 | GCATCAACCGACACATTATTTCTG | 58.970 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
5987 | 16830 | 4.201812 | CGCATCAACCGACACATTATTTCT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
5989 | 16832 | 3.438781 | ACGCATCAACCGACACATTATTT | 59.561 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
5990 | 16833 | 3.006940 | ACGCATCAACCGACACATTATT | 58.993 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
5991 | 16834 | 2.607635 | GACGCATCAACCGACACATTAT | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 1.28 |
5992 | 16835 | 1.996898 | GACGCATCAACCGACACATTA | 59.003 | 47.619 | 0.00 | 0.00 | 0.00 | 1.90 |
5993 | 16836 | 0.796312 | GACGCATCAACCGACACATT | 59.204 | 50.000 | 0.00 | 0.00 | 0.00 | 2.71 |
5994 | 16837 | 0.037326 | AGACGCATCAACCGACACAT | 60.037 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
5995 | 16838 | 0.666274 | GAGACGCATCAACCGACACA | 60.666 | 55.000 | 0.00 | 0.00 | 0.00 | 3.72 |
5996 | 16839 | 0.388649 | AGAGACGCATCAACCGACAC | 60.389 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
5998 | 16841 | 2.273370 | TAAGAGACGCATCAACCGAC | 57.727 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5999 | 16842 | 3.057104 | TCTTTAAGAGACGCATCAACCGA | 60.057 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
6000 | 16843 | 3.250744 | TCTTTAAGAGACGCATCAACCG | 58.749 | 45.455 | 0.00 | 0.00 | 0.00 | 4.44 |
6013 | 16924 | 6.850234 | ACGGAGGGAGTATATCTCTTTAAGA | 58.150 | 40.000 | 0.00 | 0.00 | 39.60 | 2.10 |
6017 | 16928 | 4.833938 | GGAACGGAGGGAGTATATCTCTTT | 59.166 | 45.833 | 0.00 | 0.00 | 39.60 | 2.52 |
6018 | 16929 | 4.106663 | AGGAACGGAGGGAGTATATCTCTT | 59.893 | 45.833 | 0.00 | 0.00 | 39.60 | 2.85 |
6019 | 16930 | 3.658705 | AGGAACGGAGGGAGTATATCTCT | 59.341 | 47.826 | 0.00 | 0.00 | 43.50 | 3.10 |
6022 | 16933 | 6.854091 | ATTAAGGAACGGAGGGAGTATATC | 57.146 | 41.667 | 0.00 | 0.00 | 0.00 | 1.63 |
6028 | 16939 | 5.543020 | ACCTTATATTAAGGAACGGAGGGAG | 59.457 | 44.000 | 17.93 | 0.00 | 39.81 | 4.30 |
6029 | 16940 | 5.306160 | CACCTTATATTAAGGAACGGAGGGA | 59.694 | 44.000 | 17.93 | 0.00 | 39.81 | 4.20 |
6048 | 16959 | 8.929487 | TGACTTTTTGGGAAAATAATACACCTT | 58.071 | 29.630 | 0.00 | 0.00 | 34.45 | 3.50 |
6056 | 16967 | 9.594478 | GAGAAGTTTGACTTTTTGGGAAAATAA | 57.406 | 29.630 | 0.00 | 0.00 | 38.80 | 1.40 |
6057 | 16968 | 8.977412 | AGAGAAGTTTGACTTTTTGGGAAAATA | 58.023 | 29.630 | 0.00 | 0.00 | 38.80 | 1.40 |
6059 | 16970 | 7.239763 | AGAGAAGTTTGACTTTTTGGGAAAA | 57.760 | 32.000 | 0.00 | 0.00 | 38.80 | 2.29 |
6061 | 16972 | 7.614192 | ACTTAGAGAAGTTTGACTTTTTGGGAA | 59.386 | 33.333 | 0.00 | 0.00 | 43.70 | 3.97 |
6062 | 16973 | 7.116736 | ACTTAGAGAAGTTTGACTTTTTGGGA | 58.883 | 34.615 | 0.00 | 0.00 | 43.70 | 4.37 |
6063 | 16974 | 7.334844 | ACTTAGAGAAGTTTGACTTTTTGGG | 57.665 | 36.000 | 0.00 | 0.00 | 43.70 | 4.12 |
6079 | 16990 | 9.924650 | GTCTATAAACTTGGTCAAACTTAGAGA | 57.075 | 33.333 | 0.00 | 5.44 | 0.00 | 3.10 |
6080 | 16991 | 9.706691 | TGTCTATAAACTTGGTCAAACTTAGAG | 57.293 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
6132 | 17043 | 9.887629 | GTCCATGATGAATCTAGTGATAATGAT | 57.112 | 33.333 | 0.00 | 0.00 | 31.70 | 2.45 |
6133 | 17044 | 9.097946 | AGTCCATGATGAATCTAGTGATAATGA | 57.902 | 33.333 | 0.00 | 0.00 | 31.70 | 2.57 |
6207 | 17557 | 8.644216 | TGTCTATGTTTGACTAACTTTACAGGA | 58.356 | 33.333 | 1.57 | 0.00 | 37.64 | 3.86 |
6210 | 17560 | 9.602568 | TGTTGTCTATGTTTGACTAACTTTACA | 57.397 | 29.630 | 1.57 | 1.91 | 37.64 | 2.41 |
6212 | 17562 | 9.826574 | ACTGTTGTCTATGTTTGACTAACTTTA | 57.173 | 29.630 | 1.57 | 0.00 | 37.64 | 1.85 |
6213 | 17563 | 8.732746 | ACTGTTGTCTATGTTTGACTAACTTT | 57.267 | 30.769 | 1.57 | 0.00 | 37.64 | 2.66 |
6214 | 17564 | 8.612619 | CAACTGTTGTCTATGTTTGACTAACTT | 58.387 | 33.333 | 12.30 | 0.00 | 37.64 | 2.66 |
6216 | 17566 | 8.062448 | GTCAACTGTTGTCTATGTTTGACTAAC | 58.938 | 37.037 | 19.12 | 1.92 | 35.63 | 2.34 |
6217 | 17567 | 7.985184 | AGTCAACTGTTGTCTATGTTTGACTAA | 59.015 | 33.333 | 19.12 | 0.00 | 33.55 | 2.24 |
6219 | 17569 | 6.349300 | AGTCAACTGTTGTCTATGTTTGACT | 58.651 | 36.000 | 19.12 | 9.11 | 35.63 | 3.41 |
6220 | 17570 | 6.604735 | AGTCAACTGTTGTCTATGTTTGAC | 57.395 | 37.500 | 19.12 | 7.06 | 35.21 | 3.18 |
6222 | 17572 | 8.687824 | AAAAAGTCAACTGTTGTCTATGTTTG | 57.312 | 30.769 | 18.10 | 0.00 | 0.00 | 2.93 |
6256 | 17606 | 8.373220 | CCTCCGTTCCTAAATATAAGGTGTATT | 58.627 | 37.037 | 4.41 | 0.00 | 35.48 | 1.89 |
6257 | 17607 | 7.038516 | CCCTCCGTTCCTAAATATAAGGTGTAT | 60.039 | 40.741 | 4.41 | 0.00 | 35.48 | 2.29 |
6258 | 17608 | 6.268387 | CCCTCCGTTCCTAAATATAAGGTGTA | 59.732 | 42.308 | 4.41 | 0.00 | 35.48 | 2.90 |
6259 | 17609 | 5.071384 | CCCTCCGTTCCTAAATATAAGGTGT | 59.929 | 44.000 | 4.41 | 0.00 | 35.48 | 4.16 |
6260 | 17610 | 5.306160 | TCCCTCCGTTCCTAAATATAAGGTG | 59.694 | 44.000 | 4.41 | 0.00 | 35.48 | 4.00 |
6261 | 17611 | 5.470501 | TCCCTCCGTTCCTAAATATAAGGT | 58.529 | 41.667 | 4.41 | 0.00 | 35.48 | 3.50 |
6262 | 17612 | 5.543020 | ACTCCCTCCGTTCCTAAATATAAGG | 59.457 | 44.000 | 0.00 | 0.00 | 35.26 | 2.69 |
6263 | 17613 | 6.667558 | ACTCCCTCCGTTCCTAAATATAAG | 57.332 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
6266 | 17616 | 8.759782 | CAATATACTCCCTCCGTTCCTAAATAT | 58.240 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
6267 | 17617 | 7.731688 | ACAATATACTCCCTCCGTTCCTAAATA | 59.268 | 37.037 | 0.00 | 0.00 | 0.00 | 1.40 |
6268 | 17618 | 6.557633 | ACAATATACTCCCTCCGTTCCTAAAT | 59.442 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
6269 | 17619 | 5.901276 | ACAATATACTCCCTCCGTTCCTAAA | 59.099 | 40.000 | 0.00 | 0.00 | 0.00 | 1.85 |
6270 | 17620 | 5.461327 | ACAATATACTCCCTCCGTTCCTAA | 58.539 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
6271 | 17621 | 5.070823 | ACAATATACTCCCTCCGTTCCTA | 57.929 | 43.478 | 0.00 | 0.00 | 0.00 | 2.94 |
6272 | 17622 | 3.924922 | ACAATATACTCCCTCCGTTCCT | 58.075 | 45.455 | 0.00 | 0.00 | 0.00 | 3.36 |
6273 | 17623 | 5.796424 | TTACAATATACTCCCTCCGTTCC | 57.204 | 43.478 | 0.00 | 0.00 | 0.00 | 3.62 |
6274 | 17624 | 6.576185 | TGTTTACAATATACTCCCTCCGTTC | 58.424 | 40.000 | 0.00 | 0.00 | 0.00 | 3.95 |
6275 | 17625 | 6.549433 | TGTTTACAATATACTCCCTCCGTT | 57.451 | 37.500 | 0.00 | 0.00 | 0.00 | 4.44 |
6276 | 17626 | 6.463897 | CCATGTTTACAATATACTCCCTCCGT | 60.464 | 42.308 | 0.00 | 0.00 | 0.00 | 4.69 |
6277 | 17627 | 5.932303 | CCATGTTTACAATATACTCCCTCCG | 59.068 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
6278 | 17628 | 5.705905 | GCCATGTTTACAATATACTCCCTCC | 59.294 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6279 | 17629 | 6.296026 | TGCCATGTTTACAATATACTCCCTC | 58.704 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
6280 | 17630 | 6.260700 | TGCCATGTTTACAATATACTCCCT | 57.739 | 37.500 | 0.00 | 0.00 | 0.00 | 4.20 |
6281 | 17631 | 7.524717 | AATGCCATGTTTACAATATACTCCC | 57.475 | 36.000 | 0.00 | 0.00 | 0.00 | 4.30 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.