Multiple sequence alignment - TraesCS2B01G052300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G052300 chr2B 100.000 8771 0 0 1 8771 25602608 25593838 0.000000e+00 16198
1 TraesCS2B01G052300 chr2B 87.555 683 58 11 29 704 287887019 287886357 0.000000e+00 765
2 TraesCS2B01G052300 chr2B 75.610 697 119 32 4319 4991 71364941 71364272 1.850000e-76 298
3 TraesCS2B01G052300 chr2D 95.681 6414 235 26 1892 8281 14097423 14091028 0.000000e+00 10272
4 TraesCS2B01G052300 chr2D 94.491 835 39 5 1159 1991 14098252 14097423 0.000000e+00 1280
5 TraesCS2B01G052300 chr2D 92.675 587 29 6 726 1305 14098975 14098396 0.000000e+00 833
6 TraesCS2B01G052300 chr2D 84.414 725 54 19 1 723 14099763 14099096 0.000000e+00 658
7 TraesCS2B01G052300 chr2D 92.568 148 7 2 1159 1305 14098396 14098252 8.920000e-50 209
8 TraesCS2B01G052300 chr2A 95.396 5473 183 30 726 6171 16471481 16466051 0.000000e+00 8647
9 TraesCS2B01G052300 chr2A 91.812 2003 121 22 6294 8281 16466051 16464077 0.000000e+00 2750
10 TraesCS2B01G052300 chr2A 83.176 636 57 20 91 723 16472197 16471609 3.600000e-148 536
11 TraesCS2B01G052300 chr2A 75.071 702 114 36 4319 4991 48453452 48452783 4.040000e-68 270
12 TraesCS2B01G052300 chr3A 85.623 2664 300 53 3451 6063 739392538 739395169 0.000000e+00 2721
13 TraesCS2B01G052300 chr3A 85.155 1098 130 27 6119 7205 739395249 739396324 0.000000e+00 1094
14 TraesCS2B01G052300 chr3A 80.586 989 128 27 1240 2212 739390110 739391050 0.000000e+00 704
15 TraesCS2B01G052300 chr3A 87.371 388 49 0 2829 3216 739391871 739392258 6.250000e-121 446
16 TraesCS2B01G052300 chr3A 80.223 359 64 5 888 1241 739389722 739390078 6.750000e-66 263
17 TraesCS2B01G052300 chr3A 94.737 95 4 1 1277 1371 496385891 496385984 7.100000e-31 147
18 TraesCS2B01G052300 chr3B 88.329 1448 139 15 4657 6085 816301599 816303035 0.000000e+00 1711
19 TraesCS2B01G052300 chr3B 83.165 1390 163 32 3169 4536 816300117 816301457 0.000000e+00 1205
20 TraesCS2B01G052300 chr3B 85.053 1037 128 19 6183 7205 816303245 816304268 0.000000e+00 1031
21 TraesCS2B01G052300 chr3B 87.371 388 49 0 2829 3216 816299700 816300087 6.250000e-121 446
22 TraesCS2B01G052300 chr3B 76.895 541 96 19 726 1248 816297383 816297912 6.710000e-71 279
23 TraesCS2B01G052300 chr3D 82.346 1773 225 50 3169 4907 606998822 607000540 0.000000e+00 1459
24 TraesCS2B01G052300 chr3D 88.852 1202 103 15 4905 6085 607000653 607001844 0.000000e+00 1448
25 TraesCS2B01G052300 chr3D 84.178 1144 137 30 6077 7205 607001870 607002984 0.000000e+00 1070
26 TraesCS2B01G052300 chr3D 79.366 1546 218 59 723 2212 606996084 606997584 0.000000e+00 994
27 TraesCS2B01G052300 chr3D 86.856 388 51 0 2829 3216 606998405 606998792 1.350000e-117 435
28 TraesCS2B01G052300 chr3D 92.727 110 8 0 7723 7832 47564285 47564176 9.110000e-35 159
29 TraesCS2B01G052300 chr3D 94.845 97 4 1 1277 1373 578589221 578589316 5.490000e-32 150
30 TraesCS2B01G052300 chr1B 89.898 683 61 5 29 704 642296239 642296920 0.000000e+00 872
31 TraesCS2B01G052300 chr1B 86.364 682 80 5 29 704 78192978 78192304 0.000000e+00 732
32 TraesCS2B01G052300 chr7B 89.676 678 55 10 34 704 635149474 635148805 0.000000e+00 850
33 TraesCS2B01G052300 chr7B 87.683 682 67 4 29 704 129498152 129498822 0.000000e+00 778
34 TraesCS2B01G052300 chr6B 89.296 682 67 3 29 704 616576019 616575338 0.000000e+00 850
35 TraesCS2B01G052300 chr5B 88.586 587 61 4 124 704 489216612 489217198 0.000000e+00 708
36 TraesCS2B01G052300 chr4A 89.695 524 50 3 29 548 666792689 666792166 0.000000e+00 665
37 TraesCS2B01G052300 chr4B 82.957 399 43 15 29 423 30805760 30805383 3.920000e-88 337
38 TraesCS2B01G052300 chrUn 73.394 654 114 33 4325 4943 88908887 88908259 1.160000e-43 189
39 TraesCS2B01G052300 chr7D 92.035 113 9 0 7720 7832 577028358 577028470 9.110000e-35 159
40 TraesCS2B01G052300 chr6D 91.818 110 9 0 7723 7832 227947897 227947788 4.240000e-33 154
41 TraesCS2B01G052300 chr5D 93.814 97 4 1 1277 1373 61850498 61850592 2.550000e-30 145
42 TraesCS2B01G052300 chr5D 93.814 97 3 2 1277 1373 61858793 61858886 9.180000e-30 143
43 TraesCS2B01G052300 chr7A 93.617 94 6 0 1280 1373 116468596 116468503 3.300000e-29 141
44 TraesCS2B01G052300 chr5A 94.565 92 4 1 1280 1371 374024573 374024483 3.300000e-29 141
45 TraesCS2B01G052300 chr5A 94.565 92 4 1 1280 1371 539825802 539825712 3.300000e-29 141
46 TraesCS2B01G052300 chr1D 93.902 82 5 0 723 804 145884535 145884616 3.320000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G052300 chr2B 25593838 25602608 8770 True 16198.000000 16198 100.0000 1 8771 1 chr2B.!!$R1 8770
1 TraesCS2B01G052300 chr2B 287886357 287887019 662 True 765.000000 765 87.5550 29 704 1 chr2B.!!$R3 675
2 TraesCS2B01G052300 chr2B 71364272 71364941 669 True 298.000000 298 75.6100 4319 4991 1 chr2B.!!$R2 672
3 TraesCS2B01G052300 chr2D 14091028 14099763 8735 True 2650.400000 10272 91.9658 1 8281 5 chr2D.!!$R1 8280
4 TraesCS2B01G052300 chr2A 16464077 16472197 8120 True 3977.666667 8647 90.1280 91 8281 3 chr2A.!!$R2 8190
5 TraesCS2B01G052300 chr2A 48452783 48453452 669 True 270.000000 270 75.0710 4319 4991 1 chr2A.!!$R1 672
6 TraesCS2B01G052300 chr3A 739389722 739396324 6602 False 1045.600000 2721 83.7916 888 7205 5 chr3A.!!$F2 6317
7 TraesCS2B01G052300 chr3B 816297383 816304268 6885 False 934.400000 1711 84.1626 726 7205 5 chr3B.!!$F1 6479
8 TraesCS2B01G052300 chr3D 606996084 607002984 6900 False 1081.200000 1459 84.3196 723 7205 5 chr3D.!!$F2 6482
9 TraesCS2B01G052300 chr1B 642296239 642296920 681 False 872.000000 872 89.8980 29 704 1 chr1B.!!$F1 675
10 TraesCS2B01G052300 chr1B 78192304 78192978 674 True 732.000000 732 86.3640 29 704 1 chr1B.!!$R1 675
11 TraesCS2B01G052300 chr7B 635148805 635149474 669 True 850.000000 850 89.6760 34 704 1 chr7B.!!$R1 670
12 TraesCS2B01G052300 chr7B 129498152 129498822 670 False 778.000000 778 87.6830 29 704 1 chr7B.!!$F1 675
13 TraesCS2B01G052300 chr6B 616575338 616576019 681 True 850.000000 850 89.2960 29 704 1 chr6B.!!$R1 675
14 TraesCS2B01G052300 chr5B 489216612 489217198 586 False 708.000000 708 88.5860 124 704 1 chr5B.!!$F1 580
15 TraesCS2B01G052300 chr4A 666792166 666792689 523 True 665.000000 665 89.6950 29 548 1 chr4A.!!$R1 519

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
918 1086 0.333312 TTACCATTTGCCCCGACCAT 59.667 50.000 0.00 0.0 0.00 3.55 F
1825 2336 0.738389 CACTCGGTGCTTTGTTTGGT 59.262 50.000 0.00 0.0 0.00 3.67 F
2874 3714 0.032615 AGGTAGTGGGGAGAGCTGAG 60.033 60.000 0.00 0.0 0.00 3.35 F
3387 4305 0.179062 AGCCTGTTGGATCTCATCGC 60.179 55.000 0.00 0.0 34.57 4.58 F
4138 5078 2.673610 GCTCGAGTCATCTGCTGTTCTT 60.674 50.000 15.13 0.0 0.00 2.52 F
5694 6817 1.273886 GGAAGCAGAGAAACTCCTCGT 59.726 52.381 0.00 0.0 38.19 4.18 F
6132 7297 0.950116 AAAGCAGCAGCAGTGAGAAC 59.050 50.000 3.17 0.0 45.49 3.01 F
6765 8032 1.065701 CATGATTCAGCTTGCTCTGCC 59.934 52.381 0.00 0.0 34.19 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2622 3309 1.372582 CAGATGTCGATGGTTGTGGG 58.627 55.000 0.00 0.0 0.00 4.61 R
3652 4575 1.204704 GTATTTTGGTCAGGCAAGCCC 59.795 52.381 7.62 0.0 36.58 5.19 R
4120 5060 1.998315 CCAAGAACAGCAGATGACTCG 59.002 52.381 0.00 0.0 0.00 4.18 R
5001 6116 3.059352 ACAAGAGAATGGCCTGTACAC 57.941 47.619 3.32 0.0 0.00 2.90 R
6110 7251 0.801251 CTCACTGCTGCTGCTTTACC 59.199 55.000 17.00 0.0 40.48 2.85 R
7561 8836 0.178921 TCTGGGAACTGAGCAGTCCT 60.179 55.000 3.27 0.0 41.58 3.85 R
7738 9017 0.107945 GCACAGGGTCTAGCAGGAAG 60.108 60.000 0.00 0.0 0.00 3.46 R
8593 9888 0.035458 AGTGAGTTTCAAGGGCGAGG 59.965 55.000 0.00 0.0 0.00 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 0.905357 CTGATCCAAGAAGTCGGGGT 59.095 55.000 0.00 0.00 0.00 4.95
25 26 0.613260 TGATCCAAGAAGTCGGGGTG 59.387 55.000 0.00 0.00 0.00 4.61
26 27 0.902531 GATCCAAGAAGTCGGGGTGA 59.097 55.000 0.00 0.00 0.00 4.02
27 28 0.905357 ATCCAAGAAGTCGGGGTGAG 59.095 55.000 0.00 0.00 0.00 3.51
32 33 2.928396 AAGTCGGGGTGAGGGTGG 60.928 66.667 0.00 0.00 0.00 4.61
56 57 1.214062 GATATCTGGCTCGCGGAGG 59.786 63.158 6.13 0.00 0.00 4.30
86 87 4.227583 AACCCCAACCCCAACCCG 62.228 66.667 0.00 0.00 0.00 5.28
371 395 1.870055 CTGGCGCTGCTGACCAAAAT 61.870 55.000 7.64 0.00 31.81 1.82
373 397 1.512734 GCGCTGCTGACCAAAATCG 60.513 57.895 0.00 0.00 0.00 3.34
378 402 2.421424 GCTGCTGACCAAAATCGATCTT 59.579 45.455 0.00 0.00 0.00 2.40
383 407 4.853743 GCTGACCAAAATCGATCTTGTTTC 59.146 41.667 10.44 6.97 0.00 2.78
412 440 1.773410 AAAAATACGCGTGTTTGGGC 58.227 45.000 30.37 0.00 0.00 5.36
419 447 4.025401 CGTGTTTGGGCCGAGTGC 62.025 66.667 0.00 0.00 40.16 4.40
424 452 2.192861 TTTGGGCCGAGTGCTTGTG 61.193 57.895 0.00 0.00 40.92 3.33
533 561 6.918022 TGCTGATTGTATACTAGTGAACATCG 59.082 38.462 5.39 7.19 0.00 3.84
548 576 1.776667 ACATCGGAATGGGGATGACAT 59.223 47.619 7.91 0.00 42.00 3.06
550 578 2.346766 TCGGAATGGGGATGACATTG 57.653 50.000 0.00 0.00 38.57 2.82
551 579 0.670162 CGGAATGGGGATGACATTGC 59.330 55.000 0.00 0.00 41.45 3.56
552 580 1.751733 CGGAATGGGGATGACATTGCT 60.752 52.381 7.79 0.00 42.31 3.91
553 581 1.684983 GGAATGGGGATGACATTGCTG 59.315 52.381 0.00 0.00 41.58 4.41
693 723 1.074405 TCTATCCAGCCATGCCAATCC 59.926 52.381 0.00 0.00 0.00 3.01
720 750 8.405531 TCTTGCTTACATACAATTTTCTATGCC 58.594 33.333 0.00 0.00 0.00 4.40
724 879 5.852282 ACATACAATTTTCTATGCCCACC 57.148 39.130 0.00 0.00 0.00 4.61
757 918 5.925509 ACTCACTTTAGTACAAGGCTGAAA 58.074 37.500 0.00 0.00 0.00 2.69
778 939 3.624326 TGCTTGTTGTTAGTCATGCAC 57.376 42.857 0.00 0.00 38.90 4.57
806 967 0.753479 TGGTGGTTGGCGTGTTTGAT 60.753 50.000 0.00 0.00 0.00 2.57
867 1030 9.897744 GCAATTATCTAATGCTGCTTTGTATTA 57.102 29.630 10.66 0.88 30.59 0.98
918 1086 0.333312 TTACCATTTGCCCCGACCAT 59.667 50.000 0.00 0.00 0.00 3.55
933 1101 6.386654 CCCCGACCATTTTTATTGTATATGC 58.613 40.000 0.00 0.00 0.00 3.14
969 1139 6.183360 GCTGCTGATAAGTCTGAAACTAACTG 60.183 42.308 0.00 0.00 37.17 3.16
1179 1352 3.356290 AGTGCTGAAACCACCAATATCC 58.644 45.455 0.00 0.00 33.75 2.59
1191 1364 3.069016 CACCAATATCCACAGCAATGCAT 59.931 43.478 8.35 0.00 0.00 3.96
1325 1819 3.557228 TTGCAATGCCTTGGTCTTTTT 57.443 38.095 1.53 0.00 32.72 1.94
1373 1867 9.052759 TCAGTCACTGGAGAAACTTTATAAAAC 57.947 33.333 4.57 0.00 31.51 2.43
1382 1876 7.384115 GGAGAAACTTTATAAAACTTGGGCAAC 59.616 37.037 0.00 0.00 0.00 4.17
1406 1900 6.926826 ACGTGAATTGTCAGTTGTGTCTTATA 59.073 34.615 0.00 0.00 33.27 0.98
1407 1901 7.602644 ACGTGAATTGTCAGTTGTGTCTTATAT 59.397 33.333 0.00 0.00 33.27 0.86
1616 2125 7.676004 TCCTGTTTTCACACTACATCTTGATA 58.324 34.615 0.00 0.00 0.00 2.15
1687 2196 4.272504 ACAACTTGGACACACGTTATCTTG 59.727 41.667 0.00 0.00 37.01 3.02
1786 2295 9.226345 GCAAATATAATTCTTTCCTCTGTTTCG 57.774 33.333 0.00 0.00 0.00 3.46
1789 2298 4.756084 AATTCTTTCCTCTGTTTCGCTG 57.244 40.909 0.00 0.00 0.00 5.18
1825 2336 0.738389 CACTCGGTGCTTTGTTTGGT 59.262 50.000 0.00 0.00 0.00 3.67
1831 2342 3.003897 TCGGTGCTTTGTTTGGTGTTATC 59.996 43.478 0.00 0.00 0.00 1.75
1847 2358 5.705905 GGTGTTATCCTGCTTTCTTGTTACT 59.294 40.000 0.00 0.00 0.00 2.24
1882 2393 4.758674 TGCTATCTTTAATCATGCTCTGCC 59.241 41.667 0.00 0.00 0.00 4.85
1961 2577 5.061808 CGTTCATGGTACTGTTACTGTTAGC 59.938 44.000 0.00 0.00 0.00 3.09
2275 2959 7.678947 ACTTTCAATCTTGACCTCACAATAG 57.321 36.000 0.00 0.00 36.83 1.73
2346 3033 5.191426 ACTAATCATCATGAAGTTGCTGCT 58.809 37.500 0.00 0.00 0.00 4.24
2384 3071 6.312918 TCTTCAGCTGATAACATTAAACGGAC 59.687 38.462 19.04 0.00 0.00 4.79
2678 3365 4.067896 GTGTCTGGAATGTGTGACAGAAT 58.932 43.478 0.00 0.00 41.17 2.40
2727 3414 2.195727 TCCACTGGCCAAGTATCATCA 58.804 47.619 7.01 0.00 36.83 3.07
2874 3714 0.032615 AGGTAGTGGGGAGAGCTGAG 60.033 60.000 0.00 0.00 0.00 3.35
3050 3890 0.822532 GGGCCTCATGCATCTTCTGG 60.823 60.000 0.84 0.00 43.89 3.86
3264 4182 2.385803 TCACTAGTAGCCAGCCTAACC 58.614 52.381 0.00 0.00 0.00 2.85
3387 4305 0.179062 AGCCTGTTGGATCTCATCGC 60.179 55.000 0.00 0.00 34.57 4.58
3456 4375 9.029368 TGTGCTAGAATATCTACAGATTATGCT 57.971 33.333 0.00 0.00 36.05 3.79
3503 4422 9.784680 ACGTAGTTATGTAATTTCACTAGAGTG 57.215 33.333 3.12 3.12 37.78 3.51
3613 4536 9.398170 CATATTCGTTGTCTCAATTGTTTTTCT 57.602 29.630 5.13 0.00 0.00 2.52
3652 4575 3.487711 CGATTACAGAAGAGGACCAGTCG 60.488 52.174 0.00 0.00 0.00 4.18
3798 4721 6.434028 CCTGTGGAAAATGGAAGTGATAAGAA 59.566 38.462 0.00 0.00 0.00 2.52
4120 5060 9.732130 AAGGATAGTGGAGATATAAATTTGCTC 57.268 33.333 0.00 2.76 0.00 4.26
4138 5078 2.673610 GCTCGAGTCATCTGCTGTTCTT 60.674 50.000 15.13 0.00 0.00 2.52
4296 5236 5.128827 TGTGATTATCCTGTGGACTTCTACC 59.871 44.000 0.00 0.00 32.98 3.18
4564 5517 6.952773 TTCTAAACTATGCCAAGTTGTGTT 57.047 33.333 1.45 0.00 39.62 3.32
4567 5521 5.337578 AAACTATGCCAAGTTGTGTTGTT 57.662 34.783 1.45 0.00 39.62 2.83
4570 5524 6.458232 ACTATGCCAAGTTGTGTTGTTAAA 57.542 33.333 1.45 0.00 0.00 1.52
4573 5527 7.984617 ACTATGCCAAGTTGTGTTGTTAAATTT 59.015 29.630 1.45 0.00 0.00 1.82
4651 5649 5.550290 TGATTGCTGATGTTTACTCAGTCA 58.450 37.500 2.63 0.00 41.77 3.41
4720 5718 5.420725 TGCAGTCTGATGTTAACTATGGT 57.579 39.130 3.32 0.00 0.00 3.55
4896 5894 5.873179 TTTCCATACAAATCGAAGGTGAC 57.127 39.130 0.00 0.00 0.00 3.67
5001 6116 4.033932 GCTAACTTTTGGTGCCTTTTGTTG 59.966 41.667 0.00 0.00 0.00 3.33
5194 6309 2.289506 GGAAGCTCTCCGTACCTTTGTT 60.290 50.000 0.00 0.00 33.37 2.83
5232 6347 5.935206 TGGTACGAGAAATGCAAATACTCAA 59.065 36.000 0.00 0.00 0.00 3.02
5233 6348 6.597672 TGGTACGAGAAATGCAAATACTCAAT 59.402 34.615 0.00 0.00 0.00 2.57
5238 6353 9.722056 ACGAGAAATGCAAATACTCAATTAATC 57.278 29.630 0.00 0.00 0.00 1.75
5277 6398 5.319453 TCATGTTGAGCTCAAATTCTTCCT 58.681 37.500 29.99 7.52 37.63 3.36
5693 6816 1.404851 GGGAAGCAGAGAAACTCCTCG 60.405 57.143 0.00 0.00 38.19 4.63
5694 6817 1.273886 GGAAGCAGAGAAACTCCTCGT 59.726 52.381 0.00 0.00 38.19 4.18
5695 6818 2.601804 GAAGCAGAGAAACTCCTCGTC 58.398 52.381 0.00 0.00 38.19 4.20
5729 6852 3.531538 GACAACACCTCACAGAAGAACA 58.468 45.455 0.00 0.00 0.00 3.18
5782 6905 1.523758 AACGTGATGACAGGAAAGGC 58.476 50.000 0.00 0.00 36.05 4.35
6044 7180 8.918202 TCTTTGTGACCAGTAAGTATTTCATT 57.082 30.769 0.00 0.00 0.00 2.57
6110 7251 6.206634 TCCTAGTTATGACCACAAAAAGCTTG 59.793 38.462 0.00 0.00 0.00 4.01
6132 7297 0.950116 AAAGCAGCAGCAGTGAGAAC 59.050 50.000 3.17 0.00 45.49 3.01
6181 7431 4.982295 GCACACACGTATTATCATCTAGCA 59.018 41.667 0.00 0.00 0.00 3.49
6201 7451 3.118000 GCACCTAGGCCCTTGTAACTATT 60.118 47.826 9.30 0.00 0.00 1.73
6226 7483 4.751600 GCCTCCAGTTTCTTTTTGAATTGG 59.248 41.667 0.00 0.00 39.31 3.16
6258 7515 7.930325 TGTCATTCAAATTGCAAAATGGACTTA 59.070 29.630 17.35 0.60 31.53 2.24
6298 7555 2.742348 ACTTCCCGGTTTTTGTTCCTT 58.258 42.857 0.00 0.00 0.00 3.36
6482 7747 8.989653 ACTCTGCTATACTTTTAAGTTCACTC 57.010 34.615 0.00 0.00 40.37 3.51
6500 7765 4.631377 TCACTCCATCAGTCAAATAAAGCG 59.369 41.667 0.00 0.00 30.26 4.68
6535 7800 6.073276 TGCACGCTGCTATTATTAGGTAAATG 60.073 38.462 10.54 0.00 45.31 2.32
6559 7826 8.020861 TGTATGACGAAATTTGTACTTACCAC 57.979 34.615 0.00 0.00 0.00 4.16
6560 7827 7.874016 TGTATGACGAAATTTGTACTTACCACT 59.126 33.333 0.00 0.00 0.00 4.00
6702 7969 7.224297 ACAATCAGTACCAGTTTGATACACTT 58.776 34.615 11.53 0.00 31.64 3.16
6714 7981 1.659098 GATACACTTCGACGGGCAAAG 59.341 52.381 0.00 0.00 0.00 2.77
6765 8032 1.065701 CATGATTCAGCTTGCTCTGCC 59.934 52.381 0.00 0.00 34.19 4.85
6902 8169 1.202639 ACAGACGGACAATCAGCAACA 60.203 47.619 0.00 0.00 0.00 3.33
6943 8210 3.550678 GCAGGTATCCGTTTTAAGTCTCG 59.449 47.826 0.00 0.00 0.00 4.04
6958 8225 2.011222 GTCTCGGTTTTGTGTTGGACA 58.989 47.619 0.00 0.00 0.00 4.02
6996 8263 6.534793 ACTTATTTTGCAGTGTTGTGGAAAAG 59.465 34.615 8.82 0.00 46.67 2.27
7183 8454 8.870160 TGGACAATTTCTGTGATTAGTTTTTG 57.130 30.769 0.00 0.00 38.84 2.44
7233 8507 4.619437 TTTTTGGTACCGTTCTGTGAAC 57.381 40.909 7.57 0.77 0.00 3.18
7238 8512 2.049228 GTACCGTTCTGTGAACGTGAG 58.951 52.381 24.55 15.33 41.64 3.51
7348 8623 4.384056 CCCTGCTGTTCCATACTAATGAG 58.616 47.826 0.00 0.00 34.84 2.90
7370 8645 4.282703 AGCTTCATGTTTTCAAAGCAGGAT 59.717 37.500 14.72 0.00 42.66 3.24
7480 8755 2.429250 TCTACCATGGTGTACGATGTGG 59.571 50.000 28.17 0.00 31.27 4.17
7487 8762 1.484356 GTGTACGATGTGGTATCCGC 58.516 55.000 0.00 0.00 34.12 5.54
7604 8879 4.951715 TGCAGGTAAATTCATGCTTCATCT 59.048 37.500 5.54 0.00 43.99 2.90
7609 8884 5.919141 GGTAAATTCATGCTTCATCTGCATC 59.081 40.000 0.00 0.00 46.80 3.91
7619 8894 3.832615 TCATCTGCATCATACAGCTGT 57.167 42.857 25.12 25.12 33.92 4.40
7620 8895 3.463944 TCATCTGCATCATACAGCTGTG 58.536 45.455 29.57 13.86 33.92 3.66
7635 8910 1.135199 GCTGTGGTCTCCAAATGCATG 60.135 52.381 0.00 0.00 34.18 4.06
7639 8914 2.299867 GTGGTCTCCAAATGCATGGTTT 59.700 45.455 0.00 0.00 41.46 3.27
7648 8923 3.770263 AATGCATGGTTTCATCACTCG 57.230 42.857 0.00 0.00 0.00 4.18
7649 8924 2.183478 TGCATGGTTTCATCACTCGT 57.817 45.000 0.00 0.00 0.00 4.18
7659 8936 8.827177 TGGTTTCATCACTCGTTATATTATCC 57.173 34.615 0.00 0.00 0.00 2.59
7669 8946 9.326413 CACTCGTTATATTATCCCTTTTCTTGT 57.674 33.333 0.00 0.00 0.00 3.16
7696 8975 7.698130 GGTTTCTGATGATTTTCTGTAATTCCG 59.302 37.037 0.00 0.00 0.00 4.30
7747 9026 1.185315 GGCCAAAATGCTTCCTGCTA 58.815 50.000 0.00 0.00 43.37 3.49
7759 9041 2.185350 CTGCTAGACCCTGTGCCG 59.815 66.667 0.00 0.00 0.00 5.69
7844 9126 9.881529 GATGAAAATGCAATAAATTGTTGTTGT 57.118 25.926 4.48 0.00 37.94 3.32
7854 9136 4.696172 GTTGTTGTCCGTCGCGCG 62.696 66.667 26.76 26.76 40.95 6.86
7967 9249 3.555966 CTGAAACTTGTGGGAAGAAGGT 58.444 45.455 0.00 0.00 0.00 3.50
7986 9268 3.031736 GGTGGAGGCTTACATAGACAGA 58.968 50.000 0.00 0.00 32.58 3.41
7987 9269 3.181474 GGTGGAGGCTTACATAGACAGAC 60.181 52.174 0.00 0.00 32.58 3.51
8043 9329 1.873591 GTATATGTTTCCTGCAGGCCG 59.126 52.381 28.91 4.82 34.44 6.13
8117 9408 1.484065 CCCCCTTTTGACCCCATTGAA 60.484 52.381 0.00 0.00 0.00 2.69
8122 9413 4.322953 CCCTTTTGACCCCATTGAATTGAG 60.323 45.833 0.00 0.00 0.00 3.02
8130 9421 1.551430 CCATTGAATTGAGCAAGGCCA 59.449 47.619 5.01 0.00 0.00 5.36
8144 9435 0.106519 AGGCCACAGTTTTGCTCAGT 60.107 50.000 5.01 0.00 0.00 3.41
8145 9436 0.031178 GGCCACAGTTTTGCTCAGTG 59.969 55.000 0.00 0.00 0.00 3.66
8147 9438 0.031178 CCACAGTTTTGCTCAGTGGC 59.969 55.000 0.00 0.00 42.68 5.01
8148 9439 0.740149 CACAGTTTTGCTCAGTGGCA 59.260 50.000 2.57 2.57 40.74 4.92
8204 9496 4.517285 TCCTGTTACCATCTTTGATGCTC 58.483 43.478 2.30 0.00 0.00 4.26
8209 9501 3.278668 ACCATCTTTGATGCTCCTGAG 57.721 47.619 2.30 0.00 0.00 3.35
8210 9502 2.842496 ACCATCTTTGATGCTCCTGAGA 59.158 45.455 0.00 0.00 0.00 3.27
8213 9505 3.883830 TCTTTGATGCTCCTGAGACTC 57.116 47.619 0.00 0.00 0.00 3.36
8216 9508 0.822811 TGATGCTCCTGAGACTCTGC 59.177 55.000 3.68 4.06 0.00 4.26
8217 9509 0.104671 GATGCTCCTGAGACTCTGCC 59.895 60.000 3.68 0.00 0.00 4.85
8228 9520 0.036952 GACTCTGCCTGCTGCTGTAA 60.037 55.000 0.00 0.00 42.00 2.41
8262 9557 1.571460 GTCAGGCGCTTGTGACAAG 59.429 57.895 20.42 20.42 42.31 3.16
8266 9561 0.107831 AGGCGCTTGTGACAAGGTTA 59.892 50.000 25.00 0.00 0.00 2.85
8267 9562 1.165270 GGCGCTTGTGACAAGGTTAT 58.835 50.000 25.00 0.00 0.00 1.89
8268 9563 1.539827 GGCGCTTGTGACAAGGTTATT 59.460 47.619 25.00 0.00 0.00 1.40
8270 9565 2.979813 GCGCTTGTGACAAGGTTATTTG 59.020 45.455 25.00 0.15 0.00 2.32
8271 9566 3.550030 GCGCTTGTGACAAGGTTATTTGT 60.550 43.478 25.00 0.00 43.61 2.83
8296 9591 6.767524 TTTTTACTCTGAGCTGGTTTCAAA 57.232 33.333 4.19 0.00 0.00 2.69
8297 9592 6.377327 TTTTACTCTGAGCTGGTTTCAAAG 57.623 37.500 4.19 0.00 0.00 2.77
8298 9593 3.845781 ACTCTGAGCTGGTTTCAAAGA 57.154 42.857 4.19 0.00 0.00 2.52
8299 9594 4.156455 ACTCTGAGCTGGTTTCAAAGAA 57.844 40.909 4.19 0.00 0.00 2.52
8300 9595 4.133078 ACTCTGAGCTGGTTTCAAAGAAG 58.867 43.478 4.19 0.00 0.00 2.85
8301 9596 4.141620 ACTCTGAGCTGGTTTCAAAGAAGA 60.142 41.667 4.19 0.00 0.00 2.87
8302 9597 4.978099 TCTGAGCTGGTTTCAAAGAAGAT 58.022 39.130 0.00 0.00 0.00 2.40
8303 9598 5.380043 TCTGAGCTGGTTTCAAAGAAGATT 58.620 37.500 0.00 0.00 0.00 2.40
8304 9599 5.829924 TCTGAGCTGGTTTCAAAGAAGATTT 59.170 36.000 0.00 0.00 0.00 2.17
8305 9600 6.322201 TCTGAGCTGGTTTCAAAGAAGATTTT 59.678 34.615 0.00 0.00 0.00 1.82
8306 9601 7.502226 TCTGAGCTGGTTTCAAAGAAGATTTTA 59.498 33.333 0.00 0.00 0.00 1.52
8307 9602 7.651808 TGAGCTGGTTTCAAAGAAGATTTTAG 58.348 34.615 0.00 0.00 0.00 1.85
8308 9603 7.502226 TGAGCTGGTTTCAAAGAAGATTTTAGA 59.498 33.333 0.00 0.00 0.00 2.10
8309 9604 8.237811 AGCTGGTTTCAAAGAAGATTTTAGAA 57.762 30.769 0.00 0.00 0.00 2.10
8310 9605 8.695456 AGCTGGTTTCAAAGAAGATTTTAGAAA 58.305 29.630 0.00 0.00 0.00 2.52
8311 9606 8.755941 GCTGGTTTCAAAGAAGATTTTAGAAAC 58.244 33.333 0.00 0.00 37.35 2.78
8314 9609 9.464714 GGTTTCAAAGAAGATTTTAGAAACTCC 57.535 33.333 12.87 0.00 37.69 3.85
8332 9627 8.462016 AGAAACTCCAATTGTAATAACATCTGC 58.538 33.333 4.43 0.00 34.97 4.26
8333 9628 7.701539 AACTCCAATTGTAATAACATCTGCA 57.298 32.000 4.43 0.00 34.97 4.41
8334 9629 7.886629 ACTCCAATTGTAATAACATCTGCAT 57.113 32.000 4.43 0.00 34.97 3.96
8335 9630 8.978874 ACTCCAATTGTAATAACATCTGCATA 57.021 30.769 4.43 0.00 34.97 3.14
8336 9631 9.060347 ACTCCAATTGTAATAACATCTGCATAG 57.940 33.333 4.43 0.00 34.97 2.23
8337 9632 9.276590 CTCCAATTGTAATAACATCTGCATAGA 57.723 33.333 4.43 0.00 34.97 1.98
8338 9633 9.625747 TCCAATTGTAATAACATCTGCATAGAA 57.374 29.630 4.43 0.00 36.32 2.10
8371 9666 9.787435 TTCTGTAGAAGAAAATTAGCAAGGTAA 57.213 29.630 0.00 0.00 42.09 2.85
8372 9667 9.216117 TCTGTAGAAGAAAATTAGCAAGGTAAC 57.784 33.333 0.00 0.00 29.54 2.50
8373 9668 8.911918 TGTAGAAGAAAATTAGCAAGGTAACA 57.088 30.769 0.00 0.00 41.41 2.41
8374 9669 9.344772 TGTAGAAGAAAATTAGCAAGGTAACAA 57.655 29.630 0.00 0.00 41.41 2.83
8386 9681 7.759489 AGCAAGGTAACAAATAACTGAATGA 57.241 32.000 0.00 0.00 41.41 2.57
8387 9682 7.820648 AGCAAGGTAACAAATAACTGAATGAG 58.179 34.615 0.00 0.00 41.41 2.90
8388 9683 6.528072 GCAAGGTAACAAATAACTGAATGAGC 59.472 38.462 0.00 0.00 41.41 4.26
8389 9684 7.575720 GCAAGGTAACAAATAACTGAATGAGCT 60.576 37.037 0.00 0.00 41.41 4.09
8390 9685 8.299570 CAAGGTAACAAATAACTGAATGAGCTT 58.700 33.333 0.00 0.00 41.41 3.74
8391 9686 8.045176 AGGTAACAAATAACTGAATGAGCTTC 57.955 34.615 0.00 0.00 41.41 3.86
8392 9687 7.665559 AGGTAACAAATAACTGAATGAGCTTCA 59.334 33.333 0.00 0.00 39.69 3.02
8403 9698 6.704289 TGAATGAGCTTCAGGGATTAATTG 57.296 37.500 0.00 0.00 38.97 2.32
8404 9699 6.425735 TGAATGAGCTTCAGGGATTAATTGA 58.574 36.000 0.00 0.00 38.97 2.57
8405 9700 7.064866 TGAATGAGCTTCAGGGATTAATTGAT 58.935 34.615 0.00 0.00 38.97 2.57
8406 9701 7.562454 TGAATGAGCTTCAGGGATTAATTGATT 59.438 33.333 0.00 0.00 38.97 2.57
8407 9702 6.704289 TGAGCTTCAGGGATTAATTGATTG 57.296 37.500 0.00 0.00 0.00 2.67
8408 9703 5.068198 TGAGCTTCAGGGATTAATTGATTGC 59.932 40.000 0.00 0.00 0.00 3.56
8409 9704 4.957954 AGCTTCAGGGATTAATTGATTGCA 59.042 37.500 12.51 0.00 0.00 4.08
8410 9705 5.422970 AGCTTCAGGGATTAATTGATTGCAA 59.577 36.000 0.00 0.00 38.60 4.08
8411 9706 5.751990 GCTTCAGGGATTAATTGATTGCAAG 59.248 40.000 4.94 0.00 37.45 4.01
8412 9707 6.406177 GCTTCAGGGATTAATTGATTGCAAGA 60.406 38.462 4.94 0.00 37.45 3.02
8413 9708 7.479352 TTCAGGGATTAATTGATTGCAAGAA 57.521 32.000 4.94 0.21 37.45 2.52
8414 9709 7.664552 TCAGGGATTAATTGATTGCAAGAAT 57.335 32.000 4.94 2.89 37.45 2.40
8415 9710 8.081517 TCAGGGATTAATTGATTGCAAGAATT 57.918 30.769 18.30 18.30 37.45 2.17
8416 9711 8.542080 TCAGGGATTAATTGATTGCAAGAATTT 58.458 29.630 19.07 9.40 37.45 1.82
8417 9712 8.609176 CAGGGATTAATTGATTGCAAGAATTTG 58.391 33.333 19.07 10.15 37.45 2.32
8418 9713 7.771826 AGGGATTAATTGATTGCAAGAATTTGG 59.228 33.333 19.07 0.00 37.45 3.28
8419 9714 7.769970 GGGATTAATTGATTGCAAGAATTTGGA 59.230 33.333 19.07 10.08 37.45 3.53
8420 9715 9.165035 GGATTAATTGATTGCAAGAATTTGGAA 57.835 29.630 19.07 11.29 46.53 3.53
8422 9717 9.947433 ATTAATTGATTGCAAGAATTTGGAAGA 57.053 25.926 19.07 3.67 45.84 2.87
8423 9718 9.947433 TTAATTGATTGCAAGAATTTGGAAGAT 57.053 25.926 19.07 1.94 45.84 2.40
8424 9719 7.843490 ATTGATTGCAAGAATTTGGAAGATG 57.157 32.000 4.94 0.00 45.84 2.90
8425 9720 6.349243 TGATTGCAAGAATTTGGAAGATGT 57.651 33.333 4.94 0.00 45.84 3.06
8426 9721 7.465353 TGATTGCAAGAATTTGGAAGATGTA 57.535 32.000 4.94 0.00 45.84 2.29
8427 9722 7.894708 TGATTGCAAGAATTTGGAAGATGTAA 58.105 30.769 4.94 0.00 45.84 2.41
8428 9723 8.366401 TGATTGCAAGAATTTGGAAGATGTAAA 58.634 29.630 4.94 0.00 45.84 2.01
8429 9724 9.206870 GATTGCAAGAATTTGGAAGATGTAAAA 57.793 29.630 4.94 0.00 45.84 1.52
8430 9725 9.729281 ATTGCAAGAATTTGGAAGATGTAAAAT 57.271 25.926 4.94 0.00 45.84 1.82
8431 9726 8.537049 TGCAAGAATTTGGAAGATGTAAAATG 57.463 30.769 0.00 0.00 34.79 2.32
8432 9727 7.118101 TGCAAGAATTTGGAAGATGTAAAATGC 59.882 33.333 0.00 0.00 34.79 3.56
8433 9728 7.118101 GCAAGAATTTGGAAGATGTAAAATGCA 59.882 33.333 0.00 0.00 34.79 3.96
8434 9729 8.991026 CAAGAATTTGGAAGATGTAAAATGCAA 58.009 29.630 0.00 0.00 0.00 4.08
8435 9730 8.767478 AGAATTTGGAAGATGTAAAATGCAAG 57.233 30.769 0.00 0.00 0.00 4.01
8436 9731 8.587608 AGAATTTGGAAGATGTAAAATGCAAGA 58.412 29.630 0.00 0.00 0.00 3.02
8437 9732 8.538409 AATTTGGAAGATGTAAAATGCAAGAC 57.462 30.769 0.00 0.00 0.00 3.01
8438 9733 6.647334 TTGGAAGATGTAAAATGCAAGACA 57.353 33.333 0.00 0.00 0.00 3.41
8439 9734 6.012658 TGGAAGATGTAAAATGCAAGACAC 57.987 37.500 0.00 0.00 0.00 3.67
8440 9735 5.769662 TGGAAGATGTAAAATGCAAGACACT 59.230 36.000 0.00 0.00 0.00 3.55
8441 9736 6.088824 GGAAGATGTAAAATGCAAGACACTG 58.911 40.000 0.00 0.00 0.00 3.66
8442 9737 5.633830 AGATGTAAAATGCAAGACACTGG 57.366 39.130 0.00 0.00 0.00 4.00
8443 9738 5.316167 AGATGTAAAATGCAAGACACTGGA 58.684 37.500 0.00 0.00 0.00 3.86
8444 9739 5.769662 AGATGTAAAATGCAAGACACTGGAA 59.230 36.000 0.00 0.00 0.00 3.53
8445 9740 5.843673 TGTAAAATGCAAGACACTGGAAA 57.156 34.783 0.00 0.00 0.00 3.13
8446 9741 6.403866 TGTAAAATGCAAGACACTGGAAAT 57.596 33.333 0.00 0.00 0.00 2.17
8447 9742 6.446318 TGTAAAATGCAAGACACTGGAAATC 58.554 36.000 0.00 0.00 0.00 2.17
8448 9743 5.796424 AAAATGCAAGACACTGGAAATCT 57.204 34.783 0.00 0.00 0.00 2.40
8449 9744 6.899393 AAAATGCAAGACACTGGAAATCTA 57.101 33.333 0.00 0.00 0.00 1.98
8450 9745 6.899393 AAATGCAAGACACTGGAAATCTAA 57.101 33.333 0.00 0.00 0.00 2.10
8451 9746 6.899393 AATGCAAGACACTGGAAATCTAAA 57.101 33.333 0.00 0.00 0.00 1.85
8452 9747 5.689383 TGCAAGACACTGGAAATCTAAAC 57.311 39.130 0.00 0.00 0.00 2.01
8453 9748 4.518970 TGCAAGACACTGGAAATCTAAACC 59.481 41.667 0.00 0.00 0.00 3.27
8454 9749 4.518970 GCAAGACACTGGAAATCTAAACCA 59.481 41.667 0.00 0.00 0.00 3.67
8472 9767 9.675464 TCTAAACCAGTTATTGTATTAACAGGG 57.325 33.333 9.61 6.97 40.91 4.45
8473 9768 9.675464 CTAAACCAGTTATTGTATTAACAGGGA 57.325 33.333 9.61 0.00 40.91 4.20
8474 9769 7.933215 AACCAGTTATTGTATTAACAGGGAC 57.067 36.000 9.61 0.00 40.91 4.46
8475 9770 6.420638 ACCAGTTATTGTATTAACAGGGACC 58.579 40.000 9.61 0.00 40.91 4.46
8476 9771 6.012333 ACCAGTTATTGTATTAACAGGGACCA 60.012 38.462 9.61 0.00 40.91 4.02
8477 9772 6.887545 CCAGTTATTGTATTAACAGGGACCAA 59.112 38.462 0.00 0.00 35.94 3.67
8478 9773 7.394923 CCAGTTATTGTATTAACAGGGACCAAA 59.605 37.037 0.00 0.00 35.94 3.28
8479 9774 8.798402 CAGTTATTGTATTAACAGGGACCAAAA 58.202 33.333 0.00 0.00 36.83 2.44
8480 9775 9.020731 AGTTATTGTATTAACAGGGACCAAAAG 57.979 33.333 0.00 0.00 36.83 2.27
8481 9776 9.016438 GTTATTGTATTAACAGGGACCAAAAGA 57.984 33.333 0.00 0.00 36.83 2.52
8482 9777 9.589461 TTATTGTATTAACAGGGACCAAAAGAA 57.411 29.630 0.00 0.00 36.83 2.52
8483 9778 7.899648 TTGTATTAACAGGGACCAAAAGAAA 57.100 32.000 0.00 0.00 36.83 2.52
8484 9779 7.519032 TGTATTAACAGGGACCAAAAGAAAG 57.481 36.000 0.00 0.00 0.00 2.62
8485 9780 7.064229 TGTATTAACAGGGACCAAAAGAAAGT 58.936 34.615 0.00 0.00 0.00 2.66
8486 9781 8.219178 TGTATTAACAGGGACCAAAAGAAAGTA 58.781 33.333 0.00 0.00 0.00 2.24
8487 9782 7.761038 ATTAACAGGGACCAAAAGAAAGTAG 57.239 36.000 0.00 0.00 0.00 2.57
8488 9783 5.382664 AACAGGGACCAAAAGAAAGTAGA 57.617 39.130 0.00 0.00 0.00 2.59
8489 9784 5.382664 ACAGGGACCAAAAGAAAGTAGAA 57.617 39.130 0.00 0.00 0.00 2.10
8490 9785 5.762279 ACAGGGACCAAAAGAAAGTAGAAA 58.238 37.500 0.00 0.00 0.00 2.52
8491 9786 5.828328 ACAGGGACCAAAAGAAAGTAGAAAG 59.172 40.000 0.00 0.00 0.00 2.62
8492 9787 5.828328 CAGGGACCAAAAGAAAGTAGAAAGT 59.172 40.000 0.00 0.00 0.00 2.66
8493 9788 6.321435 CAGGGACCAAAAGAAAGTAGAAAGTT 59.679 38.462 0.00 0.00 0.00 2.66
8494 9789 6.321435 AGGGACCAAAAGAAAGTAGAAAGTTG 59.679 38.462 0.00 0.00 0.00 3.16
8495 9790 6.320418 GGGACCAAAAGAAAGTAGAAAGTTGA 59.680 38.462 0.00 0.00 0.00 3.18
8496 9791 7.147966 GGGACCAAAAGAAAGTAGAAAGTTGAA 60.148 37.037 0.00 0.00 0.00 2.69
8497 9792 8.248253 GGACCAAAAGAAAGTAGAAAGTTGAAA 58.752 33.333 0.00 0.00 0.00 2.69
8498 9793 9.634163 GACCAAAAGAAAGTAGAAAGTTGAAAA 57.366 29.630 0.00 0.00 0.00 2.29
8533 9828 8.842358 AAGTAGTAATTCAGGTTTTCGAATCA 57.158 30.769 0.00 0.00 30.64 2.57
8534 9829 8.252964 AGTAGTAATTCAGGTTTTCGAATCAC 57.747 34.615 0.00 0.00 30.64 3.06
8535 9830 6.496338 AGTAATTCAGGTTTTCGAATCACC 57.504 37.500 16.06 16.06 30.64 4.02
8536 9831 4.783764 AATTCAGGTTTTCGAATCACCC 57.216 40.909 18.91 8.55 30.64 4.61
8537 9832 2.194201 TCAGGTTTTCGAATCACCCC 57.806 50.000 18.91 7.06 0.00 4.95
8538 9833 1.173913 CAGGTTTTCGAATCACCCCC 58.826 55.000 18.91 5.59 0.00 5.40
8539 9834 1.073098 AGGTTTTCGAATCACCCCCT 58.927 50.000 18.91 7.43 0.00 4.79
8540 9835 2.026636 CAGGTTTTCGAATCACCCCCTA 60.027 50.000 18.91 0.00 0.00 3.53
8541 9836 2.645797 AGGTTTTCGAATCACCCCCTAA 59.354 45.455 18.91 0.00 0.00 2.69
8542 9837 3.074836 AGGTTTTCGAATCACCCCCTAAA 59.925 43.478 18.91 0.00 0.00 1.85
8543 9838 3.192001 GGTTTTCGAATCACCCCCTAAAC 59.808 47.826 13.76 4.99 0.00 2.01
8544 9839 4.077108 GTTTTCGAATCACCCCCTAAACT 58.923 43.478 0.00 0.00 0.00 2.66
8545 9840 5.247862 GTTTTCGAATCACCCCCTAAACTA 58.752 41.667 0.00 0.00 0.00 2.24
8546 9841 5.502089 TTTCGAATCACCCCCTAAACTAA 57.498 39.130 0.00 0.00 0.00 2.24
8547 9842 4.748277 TCGAATCACCCCCTAAACTAAG 57.252 45.455 0.00 0.00 0.00 2.18
8548 9843 4.355549 TCGAATCACCCCCTAAACTAAGA 58.644 43.478 0.00 0.00 0.00 2.10
8549 9844 4.161001 TCGAATCACCCCCTAAACTAAGAC 59.839 45.833 0.00 0.00 0.00 3.01
8550 9845 4.682589 CGAATCACCCCCTAAACTAAGACC 60.683 50.000 0.00 0.00 0.00 3.85
8551 9846 2.554563 TCACCCCCTAAACTAAGACCC 58.445 52.381 0.00 0.00 0.00 4.46
8552 9847 2.114871 TCACCCCCTAAACTAAGACCCT 59.885 50.000 0.00 0.00 0.00 4.34
8553 9848 2.238898 CACCCCCTAAACTAAGACCCTG 59.761 54.545 0.00 0.00 0.00 4.45
8554 9849 1.212195 CCCCCTAAACTAAGACCCTGC 59.788 57.143 0.00 0.00 0.00 4.85
8555 9850 2.197465 CCCCTAAACTAAGACCCTGCT 58.803 52.381 0.00 0.00 0.00 4.24
8556 9851 2.576648 CCCCTAAACTAAGACCCTGCTT 59.423 50.000 0.00 0.00 0.00 3.91
8557 9852 3.370633 CCCCTAAACTAAGACCCTGCTTC 60.371 52.174 0.00 0.00 0.00 3.86
8558 9853 3.370633 CCCTAAACTAAGACCCTGCTTCC 60.371 52.174 0.00 0.00 0.00 3.46
8559 9854 2.474410 AAACTAAGACCCTGCTTCCG 57.526 50.000 0.00 0.00 0.00 4.30
8560 9855 0.036294 AACTAAGACCCTGCTTCCGC 60.036 55.000 0.00 0.00 0.00 5.54
8561 9856 1.153349 CTAAGACCCTGCTTCCGCC 60.153 63.158 0.00 0.00 34.43 6.13
8562 9857 1.899437 CTAAGACCCTGCTTCCGCCA 61.899 60.000 0.00 0.00 34.43 5.69
8563 9858 1.485294 TAAGACCCTGCTTCCGCCAA 61.485 55.000 0.00 0.00 34.43 4.52
8564 9859 2.282180 GACCCTGCTTCCGCCAAA 60.282 61.111 0.00 0.00 34.43 3.28
8565 9860 1.901464 GACCCTGCTTCCGCCAAAA 60.901 57.895 0.00 0.00 34.43 2.44
8566 9861 2.142357 GACCCTGCTTCCGCCAAAAC 62.142 60.000 0.00 0.00 34.43 2.43
8567 9862 2.650778 CCTGCTTCCGCCAAAACC 59.349 61.111 0.00 0.00 34.43 3.27
8568 9863 2.255252 CTGCTTCCGCCAAAACCG 59.745 61.111 0.00 0.00 34.43 4.44
8569 9864 2.203224 TGCTTCCGCCAAAACCGA 60.203 55.556 0.00 0.00 34.43 4.69
8570 9865 1.791103 CTGCTTCCGCCAAAACCGAA 61.791 55.000 0.00 0.00 34.43 4.30
8571 9866 1.360911 GCTTCCGCCAAAACCGAAA 59.639 52.632 0.00 0.00 0.00 3.46
8572 9867 0.249114 GCTTCCGCCAAAACCGAAAA 60.249 50.000 0.00 0.00 0.00 2.29
8573 9868 1.803252 GCTTCCGCCAAAACCGAAAAA 60.803 47.619 0.00 0.00 0.00 1.94
8594 9889 6.804770 AAAACAAAAACTAACAAACCCACC 57.195 33.333 0.00 0.00 0.00 4.61
8595 9890 5.748670 AACAAAAACTAACAAACCCACCT 57.251 34.783 0.00 0.00 0.00 4.00
8596 9891 5.333299 ACAAAAACTAACAAACCCACCTC 57.667 39.130 0.00 0.00 0.00 3.85
8597 9892 4.142337 ACAAAAACTAACAAACCCACCTCG 60.142 41.667 0.00 0.00 0.00 4.63
8598 9893 1.601166 AACTAACAAACCCACCTCGC 58.399 50.000 0.00 0.00 0.00 5.03
8599 9894 0.250597 ACTAACAAACCCACCTCGCC 60.251 55.000 0.00 0.00 0.00 5.54
8600 9895 0.958876 CTAACAAACCCACCTCGCCC 60.959 60.000 0.00 0.00 0.00 6.13
8601 9896 1.420532 TAACAAACCCACCTCGCCCT 61.421 55.000 0.00 0.00 0.00 5.19
8602 9897 2.115266 CAAACCCACCTCGCCCTT 59.885 61.111 0.00 0.00 0.00 3.95
8603 9898 2.115266 AAACCCACCTCGCCCTTG 59.885 61.111 0.00 0.00 0.00 3.61
8604 9899 2.457323 AAACCCACCTCGCCCTTGA 61.457 57.895 0.00 0.00 0.00 3.02
8605 9900 2.002018 AAACCCACCTCGCCCTTGAA 62.002 55.000 0.00 0.00 0.00 2.69
8606 9901 2.002018 AACCCACCTCGCCCTTGAAA 62.002 55.000 0.00 0.00 0.00 2.69
8607 9902 1.971695 CCCACCTCGCCCTTGAAAC 60.972 63.158 0.00 0.00 0.00 2.78
8608 9903 1.073199 CCACCTCGCCCTTGAAACT 59.927 57.895 0.00 0.00 0.00 2.66
8609 9904 0.955919 CCACCTCGCCCTTGAAACTC 60.956 60.000 0.00 0.00 0.00 3.01
8610 9905 0.250295 CACCTCGCCCTTGAAACTCA 60.250 55.000 0.00 0.00 0.00 3.41
8611 9906 0.250338 ACCTCGCCCTTGAAACTCAC 60.250 55.000 0.00 0.00 0.00 3.51
8612 9907 0.035458 CCTCGCCCTTGAAACTCACT 59.965 55.000 0.00 0.00 0.00 3.41
8613 9908 1.433534 CTCGCCCTTGAAACTCACTC 58.566 55.000 0.00 0.00 0.00 3.51
8614 9909 0.756294 TCGCCCTTGAAACTCACTCA 59.244 50.000 0.00 0.00 0.00 3.41
8615 9910 1.140052 TCGCCCTTGAAACTCACTCAA 59.860 47.619 0.00 0.00 0.00 3.02
8616 9911 2.154462 CGCCCTTGAAACTCACTCAAT 58.846 47.619 0.00 0.00 32.53 2.57
8617 9912 2.160417 CGCCCTTGAAACTCACTCAATC 59.840 50.000 0.00 0.00 32.53 2.67
8618 9913 3.416156 GCCCTTGAAACTCACTCAATCT 58.584 45.455 0.00 0.00 32.53 2.40
8619 9914 3.823304 GCCCTTGAAACTCACTCAATCTT 59.177 43.478 0.00 0.00 32.53 2.40
8620 9915 4.279420 GCCCTTGAAACTCACTCAATCTTT 59.721 41.667 0.00 0.00 32.53 2.52
8621 9916 5.766222 CCCTTGAAACTCACTCAATCTTTG 58.234 41.667 0.00 0.00 32.53 2.77
8622 9917 5.278660 CCCTTGAAACTCACTCAATCTTTGG 60.279 44.000 0.00 0.00 32.53 3.28
8623 9918 4.836125 TGAAACTCACTCAATCTTTGGC 57.164 40.909 0.00 0.00 0.00 4.52
8624 9919 4.464008 TGAAACTCACTCAATCTTTGGCT 58.536 39.130 0.00 0.00 0.00 4.75
8625 9920 4.516698 TGAAACTCACTCAATCTTTGGCTC 59.483 41.667 0.00 0.00 0.00 4.70
8626 9921 3.777106 ACTCACTCAATCTTTGGCTCA 57.223 42.857 0.00 0.00 0.00 4.26
8627 9922 4.090761 ACTCACTCAATCTTTGGCTCAA 57.909 40.909 0.00 0.00 0.00 3.02
8628 9923 3.817647 ACTCACTCAATCTTTGGCTCAAC 59.182 43.478 0.00 0.00 0.00 3.18
8629 9924 3.817084 CTCACTCAATCTTTGGCTCAACA 59.183 43.478 0.00 0.00 0.00 3.33
8630 9925 4.401022 TCACTCAATCTTTGGCTCAACAT 58.599 39.130 0.00 0.00 0.00 2.71
8631 9926 4.216902 TCACTCAATCTTTGGCTCAACATG 59.783 41.667 0.00 0.00 0.00 3.21
8632 9927 4.022589 CACTCAATCTTTGGCTCAACATGT 60.023 41.667 0.00 0.00 0.00 3.21
8633 9928 4.586001 ACTCAATCTTTGGCTCAACATGTT 59.414 37.500 4.92 4.92 0.00 2.71
8634 9929 4.873817 TCAATCTTTGGCTCAACATGTTG 58.126 39.130 29.01 29.01 41.71 3.33
8635 9930 4.583907 TCAATCTTTGGCTCAACATGTTGA 59.416 37.500 33.20 33.20 46.27 3.18
8636 9931 3.988379 TCTTTGGCTCAACATGTTGAC 57.012 42.857 32.36 26.60 43.90 3.18
8637 9932 3.286353 TCTTTGGCTCAACATGTTGACA 58.714 40.909 32.36 26.52 43.90 3.58
8638 9933 3.890756 TCTTTGGCTCAACATGTTGACAT 59.109 39.130 32.36 0.00 43.90 3.06
8639 9934 4.341806 TCTTTGGCTCAACATGTTGACATT 59.658 37.500 32.36 0.00 43.90 2.71
8640 9935 5.534278 TCTTTGGCTCAACATGTTGACATTA 59.466 36.000 32.36 19.64 43.90 1.90
8641 9936 5.781210 TTGGCTCAACATGTTGACATTAA 57.219 34.783 32.36 21.85 43.90 1.40
8642 9937 5.375417 TGGCTCAACATGTTGACATTAAG 57.625 39.130 32.36 23.13 43.90 1.85
8643 9938 5.069318 TGGCTCAACATGTTGACATTAAGA 58.931 37.500 32.36 13.49 43.90 2.10
8644 9939 5.181811 TGGCTCAACATGTTGACATTAAGAG 59.818 40.000 32.36 21.89 43.90 2.85
8645 9940 5.412594 GGCTCAACATGTTGACATTAAGAGA 59.587 40.000 32.36 12.16 43.90 3.10
8646 9941 6.072508 GGCTCAACATGTTGACATTAAGAGAA 60.073 38.462 32.36 11.69 43.90 2.87
8647 9942 7.020010 GCTCAACATGTTGACATTAAGAGAAG 58.980 38.462 32.36 20.22 43.90 2.85
8648 9943 7.095060 GCTCAACATGTTGACATTAAGAGAAGA 60.095 37.037 32.36 11.11 43.90 2.87
8649 9944 8.675705 TCAACATGTTGACATTAAGAGAAGAA 57.324 30.769 32.36 8.97 43.90 2.52
8650 9945 9.119418 TCAACATGTTGACATTAAGAGAAGAAA 57.881 29.630 32.36 8.61 43.90 2.52
8651 9946 9.734620 CAACATGTTGACATTAAGAGAAGAAAA 57.265 29.630 30.69 0.00 42.93 2.29
8665 9960 8.792830 AAGAGAAGAAAATATGAAACCGATGA 57.207 30.769 0.00 0.00 0.00 2.92
8666 9961 8.792830 AGAGAAGAAAATATGAAACCGATGAA 57.207 30.769 0.00 0.00 0.00 2.57
8667 9962 9.401058 AGAGAAGAAAATATGAAACCGATGAAT 57.599 29.630 0.00 0.00 0.00 2.57
8668 9963 9.657121 GAGAAGAAAATATGAAACCGATGAATC 57.343 33.333 0.00 0.00 0.00 2.52
8684 9979 6.450845 GATGAATCGATGCAAACACAAAAA 57.549 33.333 10.89 0.00 0.00 1.94
8719 10014 2.789208 CATAGGATGCGCAAACAGTTG 58.211 47.619 17.11 4.59 37.83 3.16
8720 10015 2.177394 TAGGATGCGCAAACAGTTGA 57.823 45.000 17.11 0.00 36.83 3.18
8721 10016 1.317613 AGGATGCGCAAACAGTTGAA 58.682 45.000 17.11 0.00 36.83 2.69
8722 10017 1.267806 AGGATGCGCAAACAGTTGAAG 59.732 47.619 17.11 0.00 36.83 3.02
8723 10018 1.666888 GGATGCGCAAACAGTTGAAGG 60.667 52.381 17.11 0.00 36.83 3.46
8724 10019 0.314935 ATGCGCAAACAGTTGAAGGG 59.685 50.000 17.11 0.00 36.83 3.95
8725 10020 0.749818 TGCGCAAACAGTTGAAGGGA 60.750 50.000 8.16 0.00 36.83 4.20
8726 10021 0.317854 GCGCAAACAGTTGAAGGGAC 60.318 55.000 0.30 0.00 36.83 4.46
8727 10022 1.308998 CGCAAACAGTTGAAGGGACT 58.691 50.000 0.00 0.00 36.83 3.85
8728 10023 2.489971 CGCAAACAGTTGAAGGGACTA 58.510 47.619 0.00 0.00 34.39 2.59
8729 10024 2.875933 CGCAAACAGTTGAAGGGACTAA 59.124 45.455 0.00 0.00 34.39 2.24
8730 10025 3.303791 CGCAAACAGTTGAAGGGACTAAC 60.304 47.826 0.00 0.00 34.39 2.34
8731 10026 3.630312 GCAAACAGTTGAAGGGACTAACA 59.370 43.478 0.00 0.00 34.39 2.41
8732 10027 4.097286 GCAAACAGTTGAAGGGACTAACAA 59.903 41.667 0.00 0.00 34.39 2.83
8733 10028 5.393678 GCAAACAGTTGAAGGGACTAACAAA 60.394 40.000 0.00 0.00 36.85 2.83
8734 10029 6.682861 GCAAACAGTTGAAGGGACTAACAAAT 60.683 38.462 0.00 0.00 36.85 2.32
8735 10030 7.469456 GCAAACAGTTGAAGGGACTAACAAATA 60.469 37.037 0.00 0.00 36.85 1.40
8736 10031 8.410141 CAAACAGTTGAAGGGACTAACAAATAA 58.590 33.333 0.00 0.00 38.49 1.40
8737 10032 7.745620 ACAGTTGAAGGGACTAACAAATAAG 57.254 36.000 0.00 0.00 38.49 1.73
8738 10033 7.514721 ACAGTTGAAGGGACTAACAAATAAGA 58.485 34.615 0.00 0.00 38.49 2.10
8739 10034 8.164070 ACAGTTGAAGGGACTAACAAATAAGAT 58.836 33.333 0.00 0.00 38.49 2.40
8740 10035 8.454106 CAGTTGAAGGGACTAACAAATAAGATG 58.546 37.037 0.00 0.00 38.49 2.90
8741 10036 8.383175 AGTTGAAGGGACTAACAAATAAGATGA 58.617 33.333 0.00 0.00 38.49 2.92
8742 10037 9.010029 GTTGAAGGGACTAACAAATAAGATGAA 57.990 33.333 0.00 0.00 38.49 2.57
8743 10038 8.792830 TGAAGGGACTAACAAATAAGATGAAG 57.207 34.615 0.00 0.00 38.49 3.02
8744 10039 7.336931 TGAAGGGACTAACAAATAAGATGAAGC 59.663 37.037 0.00 0.00 38.49 3.86
8745 10040 6.721318 AGGGACTAACAAATAAGATGAAGCA 58.279 36.000 0.00 0.00 36.02 3.91
8746 10041 7.349598 AGGGACTAACAAATAAGATGAAGCAT 58.650 34.615 0.00 0.00 36.02 3.79
8747 10042 7.500559 AGGGACTAACAAATAAGATGAAGCATC 59.499 37.037 0.00 0.00 37.88 3.91
8748 10043 7.283127 GGGACTAACAAATAAGATGAAGCATCA 59.717 37.037 9.77 0.00 42.72 3.07
8749 10044 8.677300 GGACTAACAAATAAGATGAAGCATCAA 58.323 33.333 9.77 0.00 42.72 2.57
8754 10049 9.715121 AACAAATAAGATGAAGCATCAAATGTT 57.285 25.926 9.77 9.47 42.72 2.71
8760 10055 6.779117 AGATGAAGCATCAAATGTTAGTTCG 58.221 36.000 9.77 0.00 42.72 3.95
8761 10056 5.295431 TGAAGCATCAAATGTTAGTTCGG 57.705 39.130 0.00 0.00 30.99 4.30
8762 10057 5.000591 TGAAGCATCAAATGTTAGTTCGGA 58.999 37.500 0.00 0.00 30.99 4.55
8763 10058 5.471797 TGAAGCATCAAATGTTAGTTCGGAA 59.528 36.000 0.00 0.00 30.99 4.30
8764 10059 5.296813 AGCATCAAATGTTAGTTCGGAAC 57.703 39.130 12.91 12.91 0.00 3.62
8765 10060 5.003804 AGCATCAAATGTTAGTTCGGAACT 58.996 37.500 25.15 25.15 45.40 3.01
8766 10061 5.473504 AGCATCAAATGTTAGTTCGGAACTT 59.526 36.000 26.71 12.27 42.81 2.66
8767 10062 6.653320 AGCATCAAATGTTAGTTCGGAACTTA 59.347 34.615 26.71 16.37 42.81 2.24
8768 10063 7.174253 AGCATCAAATGTTAGTTCGGAACTTAA 59.826 33.333 26.71 15.89 42.81 1.85
8769 10064 7.968405 GCATCAAATGTTAGTTCGGAACTTAAT 59.032 33.333 26.71 15.38 42.81 1.40
8770 10065 9.840427 CATCAAATGTTAGTTCGGAACTTAATT 57.160 29.630 26.71 19.41 42.81 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 1.296715 CCTCACCCCGACTTCTTGG 59.703 63.158 0.00 0.00 0.00 3.61
25 26 3.591254 GATATCGGCCGCCACCCTC 62.591 68.421 23.51 7.24 0.00 4.30
26 27 3.626924 GATATCGGCCGCCACCCT 61.627 66.667 23.51 0.59 0.00 4.34
27 28 3.626924 AGATATCGGCCGCCACCC 61.627 66.667 23.51 8.30 0.00 4.61
56 57 4.833989 GGGTTGGGCCGGGATTCC 62.834 72.222 2.18 0.00 38.44 3.01
156 163 1.909700 TAGGGTTTGCTCTGGCTTTG 58.090 50.000 0.00 0.00 39.59 2.77
157 164 2.239400 GTTAGGGTTTGCTCTGGCTTT 58.761 47.619 0.00 0.00 39.59 3.51
339 363 1.883544 CGCCAGCAGCTCATCAGAG 60.884 63.158 0.00 0.00 44.96 3.35
355 379 1.512734 CGATTTTGGTCAGCAGCGC 60.513 57.895 0.00 0.00 0.00 5.92
361 385 6.000891 TGAAACAAGATCGATTTTGGTCAG 57.999 37.500 26.74 7.36 0.00 3.51
362 386 6.384258 TTGAAACAAGATCGATTTTGGTCA 57.616 33.333 26.74 24.41 0.00 4.02
402 430 4.025401 GCACTCGGCCCAAACACG 62.025 66.667 0.00 0.00 36.11 4.49
419 447 1.830279 ATCACAGGACATGCCACAAG 58.170 50.000 8.58 0.00 40.02 3.16
424 452 3.347216 ACTAACAATCACAGGACATGCC 58.653 45.455 0.00 0.00 0.00 4.40
429 457 5.662674 AGTAGGACTAACAATCACAGGAC 57.337 43.478 0.00 0.00 0.00 3.85
430 458 5.542635 ACAAGTAGGACTAACAATCACAGGA 59.457 40.000 0.00 0.00 0.00 3.86
431 459 5.794894 ACAAGTAGGACTAACAATCACAGG 58.205 41.667 0.00 0.00 0.00 4.00
533 561 1.684983 CAGCAATGTCATCCCCATTCC 59.315 52.381 0.00 0.00 30.28 3.01
548 576 0.040058 ATGGCACCCTCATTCAGCAA 59.960 50.000 0.00 0.00 0.00 3.91
550 578 0.458669 CAATGGCACCCTCATTCAGC 59.541 55.000 0.00 0.00 33.08 4.26
551 579 0.458669 GCAATGGCACCCTCATTCAG 59.541 55.000 0.00 0.00 40.72 3.02
552 580 0.040058 AGCAATGGCACCCTCATTCA 59.960 50.000 0.00 0.00 44.61 2.57
553 581 0.458669 CAGCAATGGCACCCTCATTC 59.541 55.000 0.00 0.00 44.61 2.67
679 709 0.744874 CAAGAGGATTGGCATGGCTG 59.255 55.000 21.08 3.61 0.00 4.85
693 723 9.443283 GCATAGAAAATTGTATGTAAGCAAGAG 57.557 33.333 10.77 0.00 36.93 2.85
720 750 5.952526 AAAGTGAGTTTTATAACCGGTGG 57.047 39.130 8.52 0.00 34.71 4.61
757 918 3.365264 CGTGCATGACTAACAACAAGCAT 60.365 43.478 0.00 0.00 32.34 3.79
787 948 0.753479 ATCAAACACGCCAACCACCA 60.753 50.000 0.00 0.00 0.00 4.17
867 1030 9.744468 AAGAACGAAGCAAACAGTTAAAATATT 57.256 25.926 0.00 0.00 0.00 1.28
870 1033 7.033185 ACAAGAACGAAGCAAACAGTTAAAAT 58.967 30.769 0.00 0.00 0.00 1.82
872 1035 5.945155 ACAAGAACGAAGCAAACAGTTAAA 58.055 33.333 0.00 0.00 0.00 1.52
876 1039 4.434713 AAACAAGAACGAAGCAAACAGT 57.565 36.364 0.00 0.00 0.00 3.55
877 1040 7.112984 GGTAATAAACAAGAACGAAGCAAACAG 59.887 37.037 0.00 0.00 0.00 3.16
884 1052 7.061789 GGCAAATGGTAATAAACAAGAACGAAG 59.938 37.037 0.00 0.00 0.00 3.79
918 1086 6.857956 ACAAGCACCGCATATACAATAAAAA 58.142 32.000 0.00 0.00 0.00 1.94
933 1101 0.742281 ATCAGCAGCTACAAGCACCG 60.742 55.000 0.00 0.00 45.56 4.94
1191 1364 9.806448 ATGTAACCATTGGTATTAGAATATGCA 57.194 29.630 9.20 0.20 33.12 3.96
1294 1788 5.116180 CAAGGCATTGCAATCATTCTCAAT 58.884 37.500 9.53 0.00 0.00 2.57
1373 1867 1.336440 TGACAATTCACGTTGCCCAAG 59.664 47.619 0.00 0.00 32.32 3.61
1382 1876 4.536364 AAGACACAACTGACAATTCACG 57.464 40.909 0.00 0.00 0.00 4.35
1406 1900 3.838317 TGGCTGAAGTCCACTAGTACAAT 59.162 43.478 0.00 0.00 0.00 2.71
1407 1901 3.236047 TGGCTGAAGTCCACTAGTACAA 58.764 45.455 0.00 0.00 0.00 2.41
1415 1909 1.204941 ACGTCTATGGCTGAAGTCCAC 59.795 52.381 0.00 0.00 36.26 4.02
1587 2094 7.823745 AGATGTAGTGTGAAAACAGGAAATT 57.176 32.000 0.00 0.00 0.00 1.82
1616 2125 7.934120 GGTAGTTTGCACTGGATAGATAAAGAT 59.066 37.037 0.00 0.00 34.06 2.40
1659 2168 3.454375 ACGTGTGTCCAAGTTGTAGAAG 58.546 45.455 1.45 0.00 28.20 2.85
1687 2196 6.922957 TCATCAATACTTTTTGAAACTGCCAC 59.077 34.615 0.00 0.00 38.98 5.01
1786 2295 2.027192 TGAGGTCAGGGACAATTACAGC 60.027 50.000 0.00 0.00 33.68 4.40
1789 2298 3.676324 CGAGTGAGGTCAGGGACAATTAC 60.676 52.174 0.00 0.00 33.68 1.89
1825 2336 6.995686 TGAAGTAACAAGAAAGCAGGATAACA 59.004 34.615 0.00 0.00 0.00 2.41
1831 2342 6.566197 AAGATGAAGTAACAAGAAAGCAGG 57.434 37.500 0.00 0.00 0.00 4.85
1882 2393 5.331902 ACATTGACAAACAGTTCAAGTTCG 58.668 37.500 0.00 0.00 0.00 3.95
1935 2551 4.952460 ACAGTAACAGTACCATGAACGTT 58.048 39.130 0.00 0.00 0.00 3.99
1936 2552 4.595762 ACAGTAACAGTACCATGAACGT 57.404 40.909 0.00 0.00 0.00 3.99
1961 2577 6.073927 CGAATTCCATGAGTACATCACATCAG 60.074 42.308 0.00 0.00 41.91 2.90
2296 2980 4.578871 GCAAATCCTGCCAAAATAAACCT 58.421 39.130 0.00 0.00 46.13 3.50
2346 3033 3.501062 CAGCTGAAGAATGAGCAAAGTCA 59.499 43.478 8.42 0.00 37.70 3.41
2384 3071 3.057946 GGTGTTTGCTAAGCTTTCAGGAG 60.058 47.826 3.20 0.00 0.00 3.69
2622 3309 1.372582 CAGATGTCGATGGTTGTGGG 58.627 55.000 0.00 0.00 0.00 4.61
2678 3365 8.858003 TCTGTTGTTATTTGTAAAATTTGCGA 57.142 26.923 0.00 0.00 0.00 5.10
2874 3714 5.525012 TGATACAGTGCTATTTGATGTCTGC 59.475 40.000 0.00 0.00 0.00 4.26
3050 3890 5.585047 ACTGTGGTTTCAGACTTTACTGTTC 59.415 40.000 0.65 0.00 38.63 3.18
3264 4182 2.519013 CCCCCTCTTTTCTTCCTTGTG 58.481 52.381 0.00 0.00 0.00 3.33
3503 4422 9.914131 ATAAAACAAAAACTATTCTTGAGCCTC 57.086 29.630 0.00 0.00 0.00 4.70
3652 4575 1.204704 GTATTTTGGTCAGGCAAGCCC 59.795 52.381 7.62 0.00 36.58 5.19
4120 5060 1.998315 CCAAGAACAGCAGATGACTCG 59.002 52.381 0.00 0.00 0.00 4.18
4138 5078 5.248477 AGTTCTTGGTAACTCTAATGCTCCA 59.752 40.000 0.00 0.00 34.60 3.86
4553 5499 8.879342 TCCATAAATTTAACAACACAACTTGG 57.121 30.769 1.21 1.31 0.00 3.61
4611 5579 8.963725 TCAGCAATCAGAACTCATTTCATTATT 58.036 29.630 0.00 0.00 36.57 1.40
4896 5894 7.645058 ATTTGTCAAATAAGGTATCACCCAG 57.355 36.000 9.11 0.00 39.75 4.45
4962 6077 9.561069 CAAAAGTTAGCCCTCATTATGTACTAT 57.439 33.333 0.00 0.00 0.00 2.12
5001 6116 3.059352 ACAAGAGAATGGCCTGTACAC 57.941 47.619 3.32 0.00 0.00 2.90
5241 6358 9.283768 TGAGCTCAACATGAAATTAAGAAAGTA 57.716 29.630 15.67 0.00 0.00 2.24
5288 6409 9.342308 CAGTAATCCAAATAGCCAATCTAAAGA 57.658 33.333 0.00 0.00 0.00 2.52
5694 6817 3.369385 GTGTTGTCGTCTTTCTTCTCGA 58.631 45.455 0.00 0.00 0.00 4.04
5695 6818 2.471743 GGTGTTGTCGTCTTTCTTCTCG 59.528 50.000 0.00 0.00 0.00 4.04
5729 6852 1.616994 GGCCCTTCCTGCTTGTATGTT 60.617 52.381 0.00 0.00 0.00 2.71
5782 6905 6.051717 CACTAACAAGATATCCTCAGGGTTG 58.948 44.000 0.00 0.00 0.00 3.77
5835 6970 4.777463 ACGTTATACTGAAAGGGGGATTG 58.223 43.478 0.00 0.00 39.30 2.67
6080 7216 2.165641 TGTGGTCATAACTAGGACAGCG 59.834 50.000 4.15 0.00 38.64 5.18
6110 7251 0.801251 CTCACTGCTGCTGCTTTACC 59.199 55.000 17.00 0.00 40.48 2.85
6181 7431 4.347292 GCTAATAGTTACAAGGGCCTAGGT 59.653 45.833 6.41 11.54 0.00 3.08
6201 7451 6.239289 CCAATTCAAAAAGAAACTGGAGGCTA 60.239 38.462 0.00 0.00 42.04 3.93
6226 7483 7.410800 TTTTGCAATTTGAATGACAGATGAC 57.589 32.000 0.00 0.00 0.00 3.06
6283 7540 6.809689 GGTAATTATCAAGGAACAAAAACCGG 59.190 38.462 0.00 0.00 0.00 5.28
6285 7542 7.672240 TGGGTAATTATCAAGGAACAAAAACC 58.328 34.615 0.00 0.00 0.00 3.27
6480 7745 4.260538 GCTCGCTTTATTTGACTGATGGAG 60.261 45.833 0.00 0.00 0.00 3.86
6482 7747 3.374988 TGCTCGCTTTATTTGACTGATGG 59.625 43.478 0.00 0.00 0.00 3.51
6535 7800 8.166706 CAGTGGTAAGTACAAATTTCGTCATAC 58.833 37.037 0.00 0.00 0.00 2.39
6541 7808 8.080083 AGTTACAGTGGTAAGTACAAATTTCG 57.920 34.615 0.00 0.00 40.50 3.46
6702 7969 2.357034 GAGTGCTTTGCCCGTCGA 60.357 61.111 0.00 0.00 0.00 4.20
6765 8032 2.947938 GATCCATGGCCCGGTGACAG 62.948 65.000 6.96 0.00 0.00 3.51
6814 8081 3.756933 ATCACAAAATTTGCAGCCAGT 57.243 38.095 5.52 0.00 0.00 4.00
6816 8083 4.069300 TGAATCACAAAATTTGCAGCCA 57.931 36.364 5.52 0.00 0.00 4.75
6852 8119 3.650070 TGTATGTGCAAATTTTCGCCA 57.350 38.095 0.00 0.00 0.00 5.69
6902 8169 2.222027 GCAGAGTGTAGTTTGGCAGTT 58.778 47.619 0.00 0.00 0.00 3.16
6943 8210 3.192633 ACAGAACTGTCCAACACAAAACC 59.807 43.478 1.32 0.00 40.24 3.27
6958 8225 4.022849 GCAAAATAAGTCCAGCACAGAACT 60.023 41.667 0.00 0.00 0.00 3.01
7057 8324 2.325583 TGTGATAATCCCGCTTGTCC 57.674 50.000 0.00 0.00 0.00 4.02
7063 8330 1.880027 GGTGGATTGTGATAATCCCGC 59.120 52.381 16.86 10.30 44.32 6.13
7215 8489 1.136695 ACGTTCACAGAACGGTACCAA 59.863 47.619 28.65 0.00 46.86 3.67
7216 8490 0.746063 ACGTTCACAGAACGGTACCA 59.254 50.000 28.65 0.00 46.86 3.25
7222 8496 7.520856 GGAAAATCCTCACGTTCACAGAACG 62.521 48.000 25.25 25.25 40.37 3.95
7238 8512 8.764287 CACAAGAACACAAAATAAGGAAAATCC 58.236 33.333 0.00 0.00 36.58 3.01
7255 8529 6.054941 ACTACACAATCATCACACAAGAACA 58.945 36.000 0.00 0.00 0.00 3.18
7256 8530 6.545504 ACTACACAATCATCACACAAGAAC 57.454 37.500 0.00 0.00 0.00 3.01
7329 8603 6.633355 ATGAAGCTCATTAGTATGGAACAGCA 60.633 38.462 0.00 0.00 35.80 4.41
7348 8623 3.981211 TCCTGCTTTGAAAACATGAAGC 58.019 40.909 0.00 3.43 43.54 3.86
7370 8645 1.419762 TGCACCAAGCTCTCAAGGTAA 59.580 47.619 0.00 0.00 45.94 2.85
7480 8755 3.080647 CCTCCTTGGTTGCGGATAC 57.919 57.895 0.00 0.00 0.00 2.24
7561 8836 0.178921 TCTGGGAACTGAGCAGTCCT 60.179 55.000 3.27 0.00 41.58 3.85
7604 8879 1.556451 AGACCACAGCTGTATGATGCA 59.444 47.619 21.20 0.00 35.06 3.96
7609 8884 2.768253 TTGGAGACCACAGCTGTATG 57.232 50.000 21.20 16.16 30.78 2.39
7619 8894 2.307496 AACCATGCATTTGGAGACCA 57.693 45.000 13.35 0.00 39.25 4.02
7620 8895 2.562298 TGAAACCATGCATTTGGAGACC 59.438 45.455 13.35 0.72 39.25 3.85
7635 8910 8.095169 AGGGATAATATAACGAGTGATGAAACC 58.905 37.037 0.00 0.00 0.00 3.27
7639 8914 9.706691 GAAAAGGGATAATATAACGAGTGATGA 57.293 33.333 0.00 0.00 0.00 2.92
7659 8936 5.772825 TCATCAGAAACCACAAGAAAAGG 57.227 39.130 0.00 0.00 0.00 3.11
7669 8946 8.522830 GGAATTACAGAAAATCATCAGAAACCA 58.477 33.333 0.00 0.00 0.00 3.67
7738 9017 0.107945 GCACAGGGTCTAGCAGGAAG 60.108 60.000 0.00 0.00 0.00 3.46
7741 9020 2.586792 GGCACAGGGTCTAGCAGG 59.413 66.667 0.00 0.00 0.00 4.85
7747 9026 2.224159 ATTCCACGGCACAGGGTCT 61.224 57.895 0.00 0.00 0.00 3.85
7759 9041 1.069204 TCTGATCCGCTAGCATTCCAC 59.931 52.381 16.45 1.33 0.00 4.02
7854 9136 2.324860 GCAACTTGCAATCCGGTTAAC 58.675 47.619 8.97 0.00 44.26 2.01
7908 9190 0.672711 TAACTCTGCTGCTGCTGCTG 60.673 55.000 27.67 26.32 40.48 4.41
7967 9249 3.701542 CTGTCTGTCTATGTAAGCCTCCA 59.298 47.826 0.00 0.00 0.00 3.86
7986 9268 2.106511 ACCACTACATTTGTCAGGCTGT 59.893 45.455 15.27 0.00 0.00 4.40
7987 9269 2.485426 CACCACTACATTTGTCAGGCTG 59.515 50.000 8.58 8.58 0.00 4.85
8043 9329 6.707440 ATATCCTGTCGATCCATCATCTAC 57.293 41.667 0.00 0.00 31.92 2.59
8099 9387 3.582208 TCAATTCAATGGGGTCAAAAGGG 59.418 43.478 0.00 0.00 0.00 3.95
8101 9389 4.248058 GCTCAATTCAATGGGGTCAAAAG 58.752 43.478 0.00 0.00 0.00 2.27
8102 9390 3.645212 TGCTCAATTCAATGGGGTCAAAA 59.355 39.130 0.00 0.00 0.00 2.44
8103 9391 3.237746 TGCTCAATTCAATGGGGTCAAA 58.762 40.909 0.00 0.00 0.00 2.69
8117 9408 1.708341 AAACTGTGGCCTTGCTCAAT 58.292 45.000 3.32 0.00 0.00 2.57
8122 9413 0.598419 GAGCAAAACTGTGGCCTTGC 60.598 55.000 15.37 15.37 43.56 4.01
8130 9421 3.189568 TGCCACTGAGCAAAACTGT 57.810 47.368 0.00 0.00 40.56 3.55
8144 9435 2.380064 ACTGAACCTGGATTTTGCCA 57.620 45.000 0.00 0.00 36.30 4.92
8145 9436 4.864704 TTAACTGAACCTGGATTTTGCC 57.135 40.909 0.00 0.00 0.00 4.52
8146 9437 5.634859 CACATTAACTGAACCTGGATTTTGC 59.365 40.000 0.00 0.00 0.00 3.68
8147 9438 6.748132 ACACATTAACTGAACCTGGATTTTG 58.252 36.000 0.00 0.00 0.00 2.44
8148 9439 6.976934 ACACATTAACTGAACCTGGATTTT 57.023 33.333 0.00 0.00 0.00 1.82
8149 9440 9.920946 ATATACACATTAACTGAACCTGGATTT 57.079 29.630 0.00 0.00 0.00 2.17
8188 9480 4.033009 TCTCAGGAGCATCAAAGATGGTA 58.967 43.478 11.21 0.00 36.25 3.25
8190 9482 3.118334 AGTCTCAGGAGCATCAAAGATGG 60.118 47.826 8.87 0.00 36.25 3.51
8204 9496 1.218585 CAGCAGGCAGAGTCTCAGG 59.781 63.158 1.94 0.00 0.00 3.86
8216 9508 4.456911 TCTTCAGAATTTTACAGCAGCAGG 59.543 41.667 0.00 0.00 0.00 4.85
8217 9509 5.388944 GTCTTCAGAATTTTACAGCAGCAG 58.611 41.667 0.00 0.00 0.00 4.24
8228 9520 3.318017 CCTGACGTCGTCTTCAGAATTT 58.682 45.455 24.75 0.00 40.81 1.82
8276 9571 5.290493 TCTTTGAAACCAGCTCAGAGTAA 57.710 39.130 0.00 0.00 0.00 2.24
8278 9573 3.845781 TCTTTGAAACCAGCTCAGAGT 57.154 42.857 0.00 0.00 0.00 3.24
8279 9574 4.384056 TCTTCTTTGAAACCAGCTCAGAG 58.616 43.478 0.00 0.00 0.00 3.35
8280 9575 4.422073 TCTTCTTTGAAACCAGCTCAGA 57.578 40.909 0.00 0.00 0.00 3.27
8281 9576 5.702349 AATCTTCTTTGAAACCAGCTCAG 57.298 39.130 0.00 0.00 0.00 3.35
8282 9577 6.469782 AAAATCTTCTTTGAAACCAGCTCA 57.530 33.333 0.00 0.00 0.00 4.26
8283 9578 7.875971 TCTAAAATCTTCTTTGAAACCAGCTC 58.124 34.615 0.00 0.00 0.00 4.09
8284 9579 7.823745 TCTAAAATCTTCTTTGAAACCAGCT 57.176 32.000 0.00 0.00 0.00 4.24
8285 9580 8.755941 GTTTCTAAAATCTTCTTTGAAACCAGC 58.244 33.333 9.83 0.00 34.52 4.85
8288 9583 9.464714 GGAGTTTCTAAAATCTTCTTTGAAACC 57.535 33.333 14.56 9.10 37.22 3.27
8306 9601 8.462016 GCAGATGTTATTACAATTGGAGTTTCT 58.538 33.333 10.83 0.00 37.91 2.52
8307 9602 8.243426 TGCAGATGTTATTACAATTGGAGTTTC 58.757 33.333 10.83 0.00 37.91 2.78
8308 9603 8.121305 TGCAGATGTTATTACAATTGGAGTTT 57.879 30.769 10.83 0.00 37.91 2.66
8309 9604 7.701539 TGCAGATGTTATTACAATTGGAGTT 57.298 32.000 10.83 0.00 37.91 3.01
8310 9605 7.886629 ATGCAGATGTTATTACAATTGGAGT 57.113 32.000 10.83 0.00 37.91 3.85
8311 9606 9.276590 TCTATGCAGATGTTATTACAATTGGAG 57.723 33.333 10.83 0.00 37.91 3.86
8312 9607 9.625747 TTCTATGCAGATGTTATTACAATTGGA 57.374 29.630 10.83 0.00 37.91 3.53
8345 9640 9.787435 TTACCTTGCTAATTTTCTTCTACAGAA 57.213 29.630 0.00 0.00 39.99 3.02
8346 9641 9.216117 GTTACCTTGCTAATTTTCTTCTACAGA 57.784 33.333 0.00 0.00 0.00 3.41
8347 9642 8.999431 TGTTACCTTGCTAATTTTCTTCTACAG 58.001 33.333 0.00 0.00 0.00 2.74
8348 9643 8.911918 TGTTACCTTGCTAATTTTCTTCTACA 57.088 30.769 0.00 0.00 0.00 2.74
8360 9655 9.290988 TCATTCAGTTATTTGTTACCTTGCTAA 57.709 29.630 0.00 0.00 0.00 3.09
8361 9656 8.856153 TCATTCAGTTATTTGTTACCTTGCTA 57.144 30.769 0.00 0.00 0.00 3.49
8362 9657 7.575720 GCTCATTCAGTTATTTGTTACCTTGCT 60.576 37.037 0.00 0.00 0.00 3.91
8363 9658 6.528072 GCTCATTCAGTTATTTGTTACCTTGC 59.472 38.462 0.00 0.00 0.00 4.01
8364 9659 7.820648 AGCTCATTCAGTTATTTGTTACCTTG 58.179 34.615 0.00 0.00 0.00 3.61
8365 9660 8.409358 AAGCTCATTCAGTTATTTGTTACCTT 57.591 30.769 0.00 0.00 0.00 3.50
8366 9661 7.665559 TGAAGCTCATTCAGTTATTTGTTACCT 59.334 33.333 0.00 0.00 43.09 3.08
8367 9662 7.816640 TGAAGCTCATTCAGTTATTTGTTACC 58.183 34.615 0.00 0.00 43.09 2.85
8380 9675 6.425735 TCAATTAATCCCTGAAGCTCATTCA 58.574 36.000 0.00 0.00 45.79 2.57
8381 9676 6.949352 TCAATTAATCCCTGAAGCTCATTC 57.051 37.500 0.00 0.00 38.50 2.67
8382 9677 7.686127 GCAATCAATTAATCCCTGAAGCTCATT 60.686 37.037 0.00 0.00 0.00 2.57
8383 9678 6.239232 GCAATCAATTAATCCCTGAAGCTCAT 60.239 38.462 0.00 0.00 0.00 2.90
8384 9679 5.068198 GCAATCAATTAATCCCTGAAGCTCA 59.932 40.000 0.00 0.00 0.00 4.26
8385 9680 5.068198 TGCAATCAATTAATCCCTGAAGCTC 59.932 40.000 13.21 0.00 0.00 4.09
8386 9681 4.957954 TGCAATCAATTAATCCCTGAAGCT 59.042 37.500 13.21 0.00 0.00 3.74
8387 9682 5.266733 TGCAATCAATTAATCCCTGAAGC 57.733 39.130 8.40 8.40 0.00 3.86
8388 9683 7.104043 TCTTGCAATCAATTAATCCCTGAAG 57.896 36.000 0.00 0.00 0.00 3.02
8389 9684 7.479352 TTCTTGCAATCAATTAATCCCTGAA 57.521 32.000 0.00 0.00 0.00 3.02
8390 9685 7.664552 ATTCTTGCAATCAATTAATCCCTGA 57.335 32.000 0.00 0.00 0.00 3.86
8391 9686 8.609176 CAAATTCTTGCAATCAATTAATCCCTG 58.391 33.333 13.97 6.75 0.00 4.45
8392 9687 7.771826 CCAAATTCTTGCAATCAATTAATCCCT 59.228 33.333 13.97 0.00 0.00 4.20
8393 9688 7.769970 TCCAAATTCTTGCAATCAATTAATCCC 59.230 33.333 13.97 0.00 0.00 3.85
8394 9689 8.721019 TCCAAATTCTTGCAATCAATTAATCC 57.279 30.769 13.97 0.00 0.00 3.01
8396 9691 9.947433 TCTTCCAAATTCTTGCAATCAATTAAT 57.053 25.926 13.97 1.49 0.00 1.40
8397 9692 9.947433 ATCTTCCAAATTCTTGCAATCAATTAA 57.053 25.926 13.97 7.01 0.00 1.40
8398 9693 9.373603 CATCTTCCAAATTCTTGCAATCAATTA 57.626 29.630 13.97 2.34 0.00 1.40
8399 9694 7.881232 ACATCTTCCAAATTCTTGCAATCAATT 59.119 29.630 0.00 5.15 0.00 2.32
8400 9695 7.391620 ACATCTTCCAAATTCTTGCAATCAAT 58.608 30.769 0.00 0.00 0.00 2.57
8401 9696 6.761312 ACATCTTCCAAATTCTTGCAATCAA 58.239 32.000 0.00 0.00 0.00 2.57
8402 9697 6.349243 ACATCTTCCAAATTCTTGCAATCA 57.651 33.333 0.00 0.00 0.00 2.57
8403 9698 8.761575 TTTACATCTTCCAAATTCTTGCAATC 57.238 30.769 0.00 0.00 0.00 2.67
8404 9699 9.729281 ATTTTACATCTTCCAAATTCTTGCAAT 57.271 25.926 0.00 0.00 0.00 3.56
8405 9700 8.991026 CATTTTACATCTTCCAAATTCTTGCAA 58.009 29.630 0.00 0.00 0.00 4.08
8406 9701 7.118101 GCATTTTACATCTTCCAAATTCTTGCA 59.882 33.333 0.00 0.00 0.00 4.08
8407 9702 7.118101 TGCATTTTACATCTTCCAAATTCTTGC 59.882 33.333 0.00 0.00 0.00 4.01
8408 9703 8.537049 TGCATTTTACATCTTCCAAATTCTTG 57.463 30.769 0.00 0.00 0.00 3.02
8409 9704 9.211485 CTTGCATTTTACATCTTCCAAATTCTT 57.789 29.630 0.00 0.00 0.00 2.52
8410 9705 8.587608 TCTTGCATTTTACATCTTCCAAATTCT 58.412 29.630 0.00 0.00 0.00 2.40
8411 9706 8.650714 GTCTTGCATTTTACATCTTCCAAATTC 58.349 33.333 0.00 0.00 0.00 2.17
8412 9707 8.149647 TGTCTTGCATTTTACATCTTCCAAATT 58.850 29.630 0.00 0.00 0.00 1.82
8413 9708 7.599998 GTGTCTTGCATTTTACATCTTCCAAAT 59.400 33.333 0.00 0.00 0.00 2.32
8414 9709 6.922957 GTGTCTTGCATTTTACATCTTCCAAA 59.077 34.615 0.00 0.00 0.00 3.28
8415 9710 6.265196 AGTGTCTTGCATTTTACATCTTCCAA 59.735 34.615 0.00 0.00 0.00 3.53
8416 9711 5.769662 AGTGTCTTGCATTTTACATCTTCCA 59.230 36.000 0.00 0.00 0.00 3.53
8417 9712 6.088824 CAGTGTCTTGCATTTTACATCTTCC 58.911 40.000 0.00 0.00 0.00 3.46
8418 9713 6.072508 TCCAGTGTCTTGCATTTTACATCTTC 60.073 38.462 0.00 0.00 0.00 2.87
8419 9714 5.769662 TCCAGTGTCTTGCATTTTACATCTT 59.230 36.000 0.00 0.00 0.00 2.40
8420 9715 5.316167 TCCAGTGTCTTGCATTTTACATCT 58.684 37.500 0.00 0.00 0.00 2.90
8421 9716 5.627499 TCCAGTGTCTTGCATTTTACATC 57.373 39.130 0.00 0.00 0.00 3.06
8422 9717 6.403866 TTTCCAGTGTCTTGCATTTTACAT 57.596 33.333 0.00 0.00 0.00 2.29
8423 9718 5.843673 TTTCCAGTGTCTTGCATTTTACA 57.156 34.783 0.00 0.00 0.00 2.41
8424 9719 6.681777 AGATTTCCAGTGTCTTGCATTTTAC 58.318 36.000 0.00 0.00 0.00 2.01
8425 9720 6.899393 AGATTTCCAGTGTCTTGCATTTTA 57.101 33.333 0.00 0.00 0.00 1.52
8426 9721 5.796424 AGATTTCCAGTGTCTTGCATTTT 57.204 34.783 0.00 0.00 0.00 1.82
8427 9722 6.899393 TTAGATTTCCAGTGTCTTGCATTT 57.101 33.333 0.00 0.00 0.00 2.32
8428 9723 6.294731 GGTTTAGATTTCCAGTGTCTTGCATT 60.295 38.462 0.00 0.00 0.00 3.56
8429 9724 5.183904 GGTTTAGATTTCCAGTGTCTTGCAT 59.816 40.000 0.00 0.00 0.00 3.96
8430 9725 4.518970 GGTTTAGATTTCCAGTGTCTTGCA 59.481 41.667 0.00 0.00 0.00 4.08
8431 9726 4.518970 TGGTTTAGATTTCCAGTGTCTTGC 59.481 41.667 0.00 0.00 0.00 4.01
8432 9727 6.246420 CTGGTTTAGATTTCCAGTGTCTTG 57.754 41.667 0.00 0.00 42.42 3.02
8446 9741 9.675464 CCCTGTTAATACAATAACTGGTTTAGA 57.325 33.333 16.73 0.00 45.85 2.10
8447 9742 9.675464 TCCCTGTTAATACAATAACTGGTTTAG 57.325 33.333 16.73 6.58 45.85 1.85
8448 9743 9.452287 GTCCCTGTTAATACAATAACTGGTTTA 57.548 33.333 16.73 5.02 45.85 2.01
8449 9744 7.395206 GGTCCCTGTTAATACAATAACTGGTTT 59.605 37.037 16.73 0.00 45.85 3.27
8450 9745 6.888088 GGTCCCTGTTAATACAATAACTGGTT 59.112 38.462 16.73 0.00 45.85 3.67
8451 9746 6.012333 TGGTCCCTGTTAATACAATAACTGGT 60.012 38.462 16.73 0.00 45.85 4.00
8452 9747 6.419791 TGGTCCCTGTTAATACAATAACTGG 58.580 40.000 13.20 13.20 46.38 4.00
8453 9748 7.931578 TTGGTCCCTGTTAATACAATAACTG 57.068 36.000 0.00 0.00 36.84 3.16
8454 9749 8.943594 TTTTGGTCCCTGTTAATACAATAACT 57.056 30.769 0.00 0.00 36.84 2.24
8455 9750 9.016438 TCTTTTGGTCCCTGTTAATACAATAAC 57.984 33.333 0.00 0.00 36.52 1.89
8456 9751 9.589461 TTCTTTTGGTCCCTGTTAATACAATAA 57.411 29.630 0.00 0.00 32.92 1.40
8457 9752 9.589461 TTTCTTTTGGTCCCTGTTAATACAATA 57.411 29.630 0.00 0.00 32.92 1.90
8458 9753 8.485578 TTTCTTTTGGTCCCTGTTAATACAAT 57.514 30.769 0.00 0.00 32.92 2.71
8459 9754 7.562088 ACTTTCTTTTGGTCCCTGTTAATACAA 59.438 33.333 0.00 0.00 32.92 2.41
8460 9755 7.064229 ACTTTCTTTTGGTCCCTGTTAATACA 58.936 34.615 0.00 0.00 0.00 2.29
8461 9756 7.520451 ACTTTCTTTTGGTCCCTGTTAATAC 57.480 36.000 0.00 0.00 0.00 1.89
8462 9757 8.662255 TCTACTTTCTTTTGGTCCCTGTTAATA 58.338 33.333 0.00 0.00 0.00 0.98
8463 9758 7.523415 TCTACTTTCTTTTGGTCCCTGTTAAT 58.477 34.615 0.00 0.00 0.00 1.40
8464 9759 6.902408 TCTACTTTCTTTTGGTCCCTGTTAA 58.098 36.000 0.00 0.00 0.00 2.01
8465 9760 6.503560 TCTACTTTCTTTTGGTCCCTGTTA 57.496 37.500 0.00 0.00 0.00 2.41
8466 9761 5.382664 TCTACTTTCTTTTGGTCCCTGTT 57.617 39.130 0.00 0.00 0.00 3.16
8467 9762 5.382664 TTCTACTTTCTTTTGGTCCCTGT 57.617 39.130 0.00 0.00 0.00 4.00
8468 9763 5.828328 ACTTTCTACTTTCTTTTGGTCCCTG 59.172 40.000 0.00 0.00 0.00 4.45
8469 9764 6.014771 ACTTTCTACTTTCTTTTGGTCCCT 57.985 37.500 0.00 0.00 0.00 4.20
8470 9765 6.320418 TCAACTTTCTACTTTCTTTTGGTCCC 59.680 38.462 0.00 0.00 0.00 4.46
8471 9766 7.329588 TCAACTTTCTACTTTCTTTTGGTCC 57.670 36.000 0.00 0.00 0.00 4.46
8472 9767 9.634163 TTTTCAACTTTCTACTTTCTTTTGGTC 57.366 29.630 0.00 0.00 0.00 4.02
8473 9768 9.419297 GTTTTCAACTTTCTACTTTCTTTTGGT 57.581 29.630 0.00 0.00 0.00 3.67
8474 9769 8.869897 GGTTTTCAACTTTCTACTTTCTTTTGG 58.130 33.333 0.00 0.00 0.00 3.28
8475 9770 9.639601 AGGTTTTCAACTTTCTACTTTCTTTTG 57.360 29.630 0.00 0.00 0.00 2.44
8507 9802 9.932207 TGATTCGAAAACCTGAATTACTACTTA 57.068 29.630 0.00 0.00 35.06 2.24
8508 9803 8.718734 GTGATTCGAAAACCTGAATTACTACTT 58.281 33.333 0.00 0.00 37.81 2.24
8509 9804 7.333672 GGTGATTCGAAAACCTGAATTACTACT 59.666 37.037 20.59 0.00 39.60 2.57
8510 9805 7.413767 GGGTGATTCGAAAACCTGAATTACTAC 60.414 40.741 24.57 7.76 39.60 2.73
8511 9806 6.596497 GGGTGATTCGAAAACCTGAATTACTA 59.404 38.462 24.57 0.00 39.60 1.82
8512 9807 5.414765 GGGTGATTCGAAAACCTGAATTACT 59.585 40.000 24.57 0.00 39.60 2.24
8513 9808 5.392703 GGGGTGATTCGAAAACCTGAATTAC 60.393 44.000 24.57 11.73 39.20 1.89
8514 9809 4.703093 GGGGTGATTCGAAAACCTGAATTA 59.297 41.667 24.57 0.00 35.06 1.40
8515 9810 3.509967 GGGGTGATTCGAAAACCTGAATT 59.490 43.478 24.57 0.00 35.06 2.17
8516 9811 3.089284 GGGGTGATTCGAAAACCTGAAT 58.911 45.455 24.57 0.00 37.52 2.57
8517 9812 2.510613 GGGGTGATTCGAAAACCTGAA 58.489 47.619 24.57 0.00 34.24 3.02
8518 9813 1.271707 GGGGGTGATTCGAAAACCTGA 60.272 52.381 24.57 0.00 34.24 3.86
8519 9814 1.173913 GGGGGTGATTCGAAAACCTG 58.826 55.000 24.57 0.00 34.24 4.00
8520 9815 1.073098 AGGGGGTGATTCGAAAACCT 58.927 50.000 24.57 13.73 34.24 3.50
8521 9816 2.793288 TAGGGGGTGATTCGAAAACC 57.207 50.000 20.00 20.00 0.00 3.27
8522 9817 4.077108 AGTTTAGGGGGTGATTCGAAAAC 58.923 43.478 0.00 3.71 0.00 2.43
8523 9818 4.376225 AGTTTAGGGGGTGATTCGAAAA 57.624 40.909 0.00 0.00 0.00 2.29
8524 9819 5.248934 TCTTAGTTTAGGGGGTGATTCGAAA 59.751 40.000 0.00 0.00 0.00 3.46
8525 9820 4.778958 TCTTAGTTTAGGGGGTGATTCGAA 59.221 41.667 0.00 0.00 0.00 3.71
8526 9821 4.161001 GTCTTAGTTTAGGGGGTGATTCGA 59.839 45.833 0.00 0.00 0.00 3.71
8527 9822 4.439968 GTCTTAGTTTAGGGGGTGATTCG 58.560 47.826 0.00 0.00 0.00 3.34
8528 9823 4.384978 GGGTCTTAGTTTAGGGGGTGATTC 60.385 50.000 0.00 0.00 0.00 2.52
8529 9824 3.526430 GGGTCTTAGTTTAGGGGGTGATT 59.474 47.826 0.00 0.00 0.00 2.57
8530 9825 3.120898 GGGTCTTAGTTTAGGGGGTGAT 58.879 50.000 0.00 0.00 0.00 3.06
8531 9826 2.114871 AGGGTCTTAGTTTAGGGGGTGA 59.885 50.000 0.00 0.00 0.00 4.02
8532 9827 2.238898 CAGGGTCTTAGTTTAGGGGGTG 59.761 54.545 0.00 0.00 0.00 4.61
8533 9828 2.558974 CAGGGTCTTAGTTTAGGGGGT 58.441 52.381 0.00 0.00 0.00 4.95
8534 9829 1.212195 GCAGGGTCTTAGTTTAGGGGG 59.788 57.143 0.00 0.00 0.00 5.40
8535 9830 2.197465 AGCAGGGTCTTAGTTTAGGGG 58.803 52.381 0.00 0.00 0.00 4.79
8536 9831 3.370633 GGAAGCAGGGTCTTAGTTTAGGG 60.371 52.174 0.00 0.00 0.00 3.53
8537 9832 3.679083 CGGAAGCAGGGTCTTAGTTTAGG 60.679 52.174 0.00 0.00 0.00 2.69
8538 9833 3.522553 CGGAAGCAGGGTCTTAGTTTAG 58.477 50.000 0.00 0.00 0.00 1.85
8539 9834 3.604875 CGGAAGCAGGGTCTTAGTTTA 57.395 47.619 0.00 0.00 0.00 2.01
8540 9835 2.474410 CGGAAGCAGGGTCTTAGTTT 57.526 50.000 0.00 0.00 0.00 2.66
8554 9849 2.211353 TTTTTCGGTTTTGGCGGAAG 57.789 45.000 0.00 0.00 0.00 3.46
8570 9865 6.999272 AGGTGGGTTTGTTAGTTTTTGTTTTT 59.001 30.769 0.00 0.00 0.00 1.94
8571 9866 6.535540 AGGTGGGTTTGTTAGTTTTTGTTTT 58.464 32.000 0.00 0.00 0.00 2.43
8572 9867 6.116711 AGGTGGGTTTGTTAGTTTTTGTTT 57.883 33.333 0.00 0.00 0.00 2.83
8573 9868 5.622687 CGAGGTGGGTTTGTTAGTTTTTGTT 60.623 40.000 0.00 0.00 0.00 2.83
8574 9869 4.142337 CGAGGTGGGTTTGTTAGTTTTTGT 60.142 41.667 0.00 0.00 0.00 2.83
8575 9870 4.356289 CGAGGTGGGTTTGTTAGTTTTTG 58.644 43.478 0.00 0.00 0.00 2.44
8576 9871 3.181484 GCGAGGTGGGTTTGTTAGTTTTT 60.181 43.478 0.00 0.00 0.00 1.94
8577 9872 2.359848 GCGAGGTGGGTTTGTTAGTTTT 59.640 45.455 0.00 0.00 0.00 2.43
8578 9873 1.951602 GCGAGGTGGGTTTGTTAGTTT 59.048 47.619 0.00 0.00 0.00 2.66
8579 9874 1.601166 GCGAGGTGGGTTTGTTAGTT 58.399 50.000 0.00 0.00 0.00 2.24
8580 9875 0.250597 GGCGAGGTGGGTTTGTTAGT 60.251 55.000 0.00 0.00 0.00 2.24
8581 9876 0.958876 GGGCGAGGTGGGTTTGTTAG 60.959 60.000 0.00 0.00 0.00 2.34
8582 9877 1.073548 GGGCGAGGTGGGTTTGTTA 59.926 57.895 0.00 0.00 0.00 2.41
8583 9878 2.203437 GGGCGAGGTGGGTTTGTT 60.203 61.111 0.00 0.00 0.00 2.83
8584 9879 2.763645 AAGGGCGAGGTGGGTTTGT 61.764 57.895 0.00 0.00 0.00 2.83
8585 9880 2.115266 AAGGGCGAGGTGGGTTTG 59.885 61.111 0.00 0.00 0.00 2.93
8586 9881 2.002018 TTCAAGGGCGAGGTGGGTTT 62.002 55.000 0.00 0.00 0.00 3.27
8587 9882 2.002018 TTTCAAGGGCGAGGTGGGTT 62.002 55.000 0.00 0.00 0.00 4.11
8588 9883 2.457323 TTTCAAGGGCGAGGTGGGT 61.457 57.895 0.00 0.00 0.00 4.51
8589 9884 1.971695 GTTTCAAGGGCGAGGTGGG 60.972 63.158 0.00 0.00 0.00 4.61
8590 9885 0.955919 GAGTTTCAAGGGCGAGGTGG 60.956 60.000 0.00 0.00 0.00 4.61
8591 9886 0.250295 TGAGTTTCAAGGGCGAGGTG 60.250 55.000 0.00 0.00 0.00 4.00
8592 9887 0.250338 GTGAGTTTCAAGGGCGAGGT 60.250 55.000 0.00 0.00 0.00 3.85
8593 9888 0.035458 AGTGAGTTTCAAGGGCGAGG 59.965 55.000 0.00 0.00 0.00 4.63
8594 9889 1.270305 TGAGTGAGTTTCAAGGGCGAG 60.270 52.381 0.00 0.00 0.00 5.03
8595 9890 0.756294 TGAGTGAGTTTCAAGGGCGA 59.244 50.000 0.00 0.00 0.00 5.54
8596 9891 1.593196 TTGAGTGAGTTTCAAGGGCG 58.407 50.000 0.00 0.00 31.35 6.13
8597 9892 3.416156 AGATTGAGTGAGTTTCAAGGGC 58.584 45.455 0.00 0.00 37.91 5.19
8598 9893 5.278660 CCAAAGATTGAGTGAGTTTCAAGGG 60.279 44.000 0.00 0.00 37.91 3.95
8599 9894 5.766222 CCAAAGATTGAGTGAGTTTCAAGG 58.234 41.667 0.00 0.00 37.91 3.61
8600 9895 5.009410 AGCCAAAGATTGAGTGAGTTTCAAG 59.991 40.000 0.00 0.00 37.91 3.02
8601 9896 4.889409 AGCCAAAGATTGAGTGAGTTTCAA 59.111 37.500 0.00 0.00 38.76 2.69
8602 9897 4.464008 AGCCAAAGATTGAGTGAGTTTCA 58.536 39.130 0.00 0.00 0.00 2.69
8603 9898 4.516698 TGAGCCAAAGATTGAGTGAGTTTC 59.483 41.667 0.00 0.00 0.00 2.78
8604 9899 4.464008 TGAGCCAAAGATTGAGTGAGTTT 58.536 39.130 0.00 0.00 0.00 2.66
8605 9900 4.090761 TGAGCCAAAGATTGAGTGAGTT 57.909 40.909 0.00 0.00 0.00 3.01
8606 9901 3.777106 TGAGCCAAAGATTGAGTGAGT 57.223 42.857 0.00 0.00 0.00 3.41
8607 9902 3.817084 TGTTGAGCCAAAGATTGAGTGAG 59.183 43.478 0.00 0.00 0.00 3.51
8608 9903 3.819368 TGTTGAGCCAAAGATTGAGTGA 58.181 40.909 0.00 0.00 0.00 3.41
8609 9904 4.022589 ACATGTTGAGCCAAAGATTGAGTG 60.023 41.667 0.00 0.00 0.00 3.51
8610 9905 4.147321 ACATGTTGAGCCAAAGATTGAGT 58.853 39.130 0.00 0.00 0.00 3.41
8611 9906 4.778534 ACATGTTGAGCCAAAGATTGAG 57.221 40.909 0.00 0.00 0.00 3.02
8612 9907 4.583907 TCAACATGTTGAGCCAAAGATTGA 59.416 37.500 32.36 10.21 43.90 2.57
8613 9908 4.873817 TCAACATGTTGAGCCAAAGATTG 58.126 39.130 32.36 7.98 43.90 2.67
8624 9919 8.675705 TTCTTCTCTTAATGTCAACATGTTGA 57.324 30.769 32.36 32.36 46.27 3.18
8625 9920 9.734620 TTTTCTTCTCTTAATGTCAACATGTTG 57.265 29.630 29.01 29.01 41.71 3.33
8639 9934 9.884636 TCATCGGTTTCATATTTTCTTCTCTTA 57.115 29.630 0.00 0.00 0.00 2.10
8640 9935 8.792830 TCATCGGTTTCATATTTTCTTCTCTT 57.207 30.769 0.00 0.00 0.00 2.85
8641 9936 8.792830 TTCATCGGTTTCATATTTTCTTCTCT 57.207 30.769 0.00 0.00 0.00 3.10
8642 9937 9.657121 GATTCATCGGTTTCATATTTTCTTCTC 57.343 33.333 0.00 0.00 0.00 2.87
8643 9938 8.338259 CGATTCATCGGTTTCATATTTTCTTCT 58.662 33.333 0.98 0.00 45.93 2.85
8644 9939 8.481132 CGATTCATCGGTTTCATATTTTCTTC 57.519 34.615 0.98 0.00 45.93 2.87
8661 9956 6.450845 TTTTTGTGTTTGCATCGATTCATC 57.549 33.333 0.00 0.00 0.00 2.92
8699 9994 2.419673 TCAACTGTTTGCGCATCCTATG 59.580 45.455 12.75 7.10 32.17 2.23
8700 9995 2.710377 TCAACTGTTTGCGCATCCTAT 58.290 42.857 12.75 0.00 32.17 2.57
8701 9996 2.177394 TCAACTGTTTGCGCATCCTA 57.823 45.000 12.75 0.00 32.17 2.94
8702 9997 1.267806 CTTCAACTGTTTGCGCATCCT 59.732 47.619 12.75 0.00 32.17 3.24
8703 9998 1.666888 CCTTCAACTGTTTGCGCATCC 60.667 52.381 12.75 5.22 32.17 3.51
8704 9999 1.666888 CCCTTCAACTGTTTGCGCATC 60.667 52.381 12.75 8.68 32.17 3.91
8705 10000 0.314935 CCCTTCAACTGTTTGCGCAT 59.685 50.000 12.75 0.00 32.17 4.73
8706 10001 0.749818 TCCCTTCAACTGTTTGCGCA 60.750 50.000 5.66 5.66 32.17 6.09
8707 10002 0.317854 GTCCCTTCAACTGTTTGCGC 60.318 55.000 0.00 0.00 32.17 6.09
8708 10003 1.308998 AGTCCCTTCAACTGTTTGCG 58.691 50.000 0.00 0.00 32.17 4.85
8709 10004 3.630312 TGTTAGTCCCTTCAACTGTTTGC 59.370 43.478 0.00 0.00 32.17 3.68
8710 10005 5.828299 TTGTTAGTCCCTTCAACTGTTTG 57.172 39.130 0.00 0.00 0.00 2.93
8711 10006 8.528044 TTATTTGTTAGTCCCTTCAACTGTTT 57.472 30.769 0.00 0.00 0.00 2.83
8712 10007 7.996644 TCTTATTTGTTAGTCCCTTCAACTGTT 59.003 33.333 0.00 0.00 0.00 3.16
8713 10008 7.514721 TCTTATTTGTTAGTCCCTTCAACTGT 58.485 34.615 0.00 0.00 0.00 3.55
8714 10009 7.979444 TCTTATTTGTTAGTCCCTTCAACTG 57.021 36.000 0.00 0.00 0.00 3.16
8715 10010 8.383175 TCATCTTATTTGTTAGTCCCTTCAACT 58.617 33.333 0.00 0.00 0.00 3.16
8716 10011 8.561738 TCATCTTATTTGTTAGTCCCTTCAAC 57.438 34.615 0.00 0.00 0.00 3.18
8717 10012 9.231297 CTTCATCTTATTTGTTAGTCCCTTCAA 57.769 33.333 0.00 0.00 0.00 2.69
8718 10013 7.336931 GCTTCATCTTATTTGTTAGTCCCTTCA 59.663 37.037 0.00 0.00 0.00 3.02
8719 10014 7.336931 TGCTTCATCTTATTTGTTAGTCCCTTC 59.663 37.037 0.00 0.00 0.00 3.46
8720 10015 7.175104 TGCTTCATCTTATTTGTTAGTCCCTT 58.825 34.615 0.00 0.00 0.00 3.95
8721 10016 6.721318 TGCTTCATCTTATTTGTTAGTCCCT 58.279 36.000 0.00 0.00 0.00 4.20
8722 10017 7.283127 TGATGCTTCATCTTATTTGTTAGTCCC 59.717 37.037 8.11 0.00 41.06 4.46
8723 10018 8.213518 TGATGCTTCATCTTATTTGTTAGTCC 57.786 34.615 8.11 0.00 41.06 3.85
8728 10023 9.715121 AACATTTGATGCTTCATCTTATTTGTT 57.285 25.926 2.75 4.08 41.06 2.83
8734 10029 8.390354 CGAACTAACATTTGATGCTTCATCTTA 58.610 33.333 2.75 0.00 41.06 2.10
8735 10030 7.246311 CGAACTAACATTTGATGCTTCATCTT 58.754 34.615 2.75 0.00 41.06 2.40
8736 10031 6.183360 CCGAACTAACATTTGATGCTTCATCT 60.183 38.462 2.75 0.00 41.06 2.90
8737 10032 5.967674 CCGAACTAACATTTGATGCTTCATC 59.032 40.000 2.75 0.13 40.88 2.92
8738 10033 5.647658 TCCGAACTAACATTTGATGCTTCAT 59.352 36.000 2.75 0.00 0.00 2.57
8739 10034 5.000591 TCCGAACTAACATTTGATGCTTCA 58.999 37.500 0.00 0.00 0.00 3.02
8740 10035 5.545658 TCCGAACTAACATTTGATGCTTC 57.454 39.130 0.00 0.00 0.00 3.86
8741 10036 5.473504 AGTTCCGAACTAACATTTGATGCTT 59.526 36.000 12.24 0.00 40.69 3.91
8742 10037 5.003804 AGTTCCGAACTAACATTTGATGCT 58.996 37.500 12.24 0.00 40.69 3.79
8743 10038 5.296813 AGTTCCGAACTAACATTTGATGC 57.703 39.130 12.24 0.00 40.69 3.91
8744 10039 9.840427 AATTAAGTTCCGAACTAACATTTGATG 57.160 29.630 14.19 0.00 41.91 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.