Multiple sequence alignment - TraesCS2B01G052100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G052100 chr2B 100.000 5501 0 0 1 5501 25353027 25347527 0.000000e+00 10159.0
1 TraesCS2B01G052100 chr2A 93.508 3204 172 23 1 3188 16319570 16322753 0.000000e+00 4732.0
2 TraesCS2B01G052100 chr2A 93.659 1656 78 11 3265 4901 16322780 16324427 0.000000e+00 2451.0
3 TraesCS2B01G052100 chr2A 72.767 907 178 46 1967 2839 754111269 754110398 5.510000e-60 243.0
4 TraesCS2B01G052100 chr2A 91.515 165 13 1 5338 5501 672335852 672336016 5.540000e-55 226.0
5 TraesCS2B01G052100 chr2A 89.726 146 13 2 5100 5243 16324429 16324574 9.410000e-43 185.0
6 TraesCS2B01G052100 chr2A 100.000 39 0 0 3199 3237 16322744 16322782 7.640000e-09 73.1
7 TraesCS2B01G052100 chr2D 88.095 1218 83 26 3576 4753 13938454 13937259 0.000000e+00 1389.0
8 TraesCS2B01G052100 chr2D 81.138 1002 142 27 1767 2738 13940671 13939687 0.000000e+00 760.0
9 TraesCS2B01G052100 chr2D 90.698 258 16 5 5074 5326 13937165 13936911 2.450000e-88 337.0
10 TraesCS2B01G052100 chr2D 89.796 98 10 0 4815 4912 13937261 13937164 5.780000e-25 126.0
11 TraesCS2B01G052100 chr7B 78.268 1178 166 59 1713 2841 657549016 657547880 0.000000e+00 675.0
12 TraesCS2B01G052100 chr7B 92.090 177 13 1 4905 5081 641152201 641152376 1.180000e-61 248.0
13 TraesCS2B01G052100 chr7B 95.070 142 7 0 5338 5479 583373015 583372874 1.990000e-54 224.0
14 TraesCS2B01G052100 chr7B 90.625 160 12 3 5321 5479 384970641 384970798 5.580000e-50 209.0
15 TraesCS2B01G052100 chr7A 82.267 547 80 11 3225 3764 677889703 677889167 1.810000e-124 457.0
16 TraesCS2B01G052100 chr7A 80.697 373 57 12 1867 2235 677930303 677929942 5.430000e-70 276.0
17 TraesCS2B01G052100 chr7A 76.755 413 84 11 3225 3630 613711319 613711726 2.580000e-53 220.0
18 TraesCS2B01G052100 chr1A 75.423 769 137 36 1813 2541 34383201 34383957 5.310000e-85 326.0
19 TraesCS2B01G052100 chr1A 76.902 368 68 14 3280 3639 34383205 34383563 5.620000e-45 193.0
20 TraesCS2B01G052100 chr1A 79.221 231 38 6 1074 1295 34383596 34383825 9.540000e-33 152.0
21 TraesCS2B01G052100 chr1A 80.000 125 21 4 2689 2809 34384097 34384221 7.590000e-14 89.8
22 TraesCS2B01G052100 chr6A 78.076 447 81 14 3225 3661 36691207 36691646 3.270000e-67 267.0
23 TraesCS2B01G052100 chr1D 94.012 167 10 0 4909 5075 52360285 52360451 2.540000e-63 254.0
24 TraesCS2B01G052100 chr1D 92.000 175 12 2 4901 5075 178466298 178466470 1.530000e-60 244.0
25 TraesCS2B01G052100 chr1D 90.323 186 16 2 4891 5075 238940196 238940380 5.510000e-60 243.0
26 TraesCS2B01G052100 chr1D 90.710 183 15 2 4894 5075 360358206 360358387 5.510000e-60 243.0
27 TraesCS2B01G052100 chr5A 93.023 172 10 2 4906 5076 115015373 115015543 3.290000e-62 250.0
28 TraesCS2B01G052100 chr5A 92.090 177 14 0 4899 5075 290391873 290391697 3.290000e-62 250.0
29 TraesCS2B01G052100 chr3B 92.090 177 13 1 4905 5081 655849590 655849415 1.180000e-61 248.0
30 TraesCS2B01G052100 chr3B 76.457 446 91 12 3225 3661 534149008 534148568 4.290000e-56 230.0
31 TraesCS2B01G052100 chr6D 91.160 181 13 3 4900 5077 97856598 97856418 5.510000e-60 243.0
32 TraesCS2B01G052100 chr4D 76.854 445 90 12 3225 3661 198582275 198582714 7.120000e-59 239.0
33 TraesCS2B01G052100 chr4D 90.361 166 13 3 5338 5501 238640022 238640186 1.200000e-51 215.0
34 TraesCS2B01G052100 chr4D 93.056 144 10 0 5338 5481 3590473 3590616 1.550000e-50 211.0
35 TraesCS2B01G052100 chr6B 77.451 408 78 12 3262 3661 67994963 67995364 1.190000e-56 231.0
36 TraesCS2B01G052100 chr6B 73.725 647 142 17 1799 2422 67994963 67995604 1.540000e-55 228.0
37 TraesCS2B01G052100 chr6B 95.105 143 7 0 5339 5481 132353577 132353435 5.540000e-55 226.0
38 TraesCS2B01G052100 chr6B 90.854 164 14 1 5337 5500 228695839 228695677 9.280000e-53 219.0
39 TraesCS2B01G052100 chr6B 77.816 293 57 7 3280 3567 254029848 254029559 2.040000e-39 174.0
40 TraesCS2B01G052100 chr5B 76.629 445 89 13 3225 3661 386153237 386153674 1.190000e-56 231.0
41 TraesCS2B01G052100 chr1B 72.378 963 185 48 1876 2793 53925750 53926676 4.290000e-56 230.0
42 TraesCS2B01G052100 chrUn 93.007 143 10 0 5339 5481 41734215 41734357 5.580000e-50 209.0
43 TraesCS2B01G052100 chr4B 93.056 144 9 1 5339 5481 474400592 474400449 5.580000e-50 209.0
44 TraesCS2B01G052100 chr3D 81.974 233 38 4 2954 3184 327572942 327573172 1.560000e-45 195.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G052100 chr2B 25347527 25353027 5500 True 10159.000 10159 100.00000 1 5501 1 chr2B.!!$R1 5500
1 TraesCS2B01G052100 chr2A 16319570 16324574 5004 False 1860.275 4732 94.22325 1 5243 4 chr2A.!!$F2 5242
2 TraesCS2B01G052100 chr2A 754110398 754111269 871 True 243.000 243 72.76700 1967 2839 1 chr2A.!!$R1 872
3 TraesCS2B01G052100 chr2D 13936911 13940671 3760 True 653.000 1389 87.43175 1767 5326 4 chr2D.!!$R1 3559
4 TraesCS2B01G052100 chr7B 657547880 657549016 1136 True 675.000 675 78.26800 1713 2841 1 chr7B.!!$R2 1128
5 TraesCS2B01G052100 chr7A 677889167 677889703 536 True 457.000 457 82.26700 3225 3764 1 chr7A.!!$R1 539
6 TraesCS2B01G052100 chr6B 67994963 67995604 641 False 229.500 231 75.58800 1799 3661 2 chr6B.!!$F1 1862
7 TraesCS2B01G052100 chr1B 53925750 53926676 926 False 230.000 230 72.37800 1876 2793 1 chr1B.!!$F1 917

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
815 818 0.031314 CTCAGATCGGACGATGGTGG 59.969 60.0 12.4 0.0 34.60 4.61 F
2225 2266 0.883153 TTGTATTGGCTGTGCTGCTG 59.117 50.0 0.0 0.0 0.00 4.41 F
3001 3805 0.163788 CTCTTGTAAGCCGTTGCACG 59.836 55.0 0.0 0.0 42.11 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2375 2434 0.607217 CATGCCCAGAAGTGCTGTGA 60.607 55.0 0.00 0.00 43.33 3.58 R
3076 3881 0.309612 CACGAAGGGGAAAAACCGTG 59.690 55.0 0.00 0.00 40.70 4.94 R
4676 5586 0.037303 TCCTTACTCTGACGGACCGT 59.963 55.0 21.93 21.93 45.10 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.484537 ACCTACTAGACTACGCAAGAGA 57.515 45.455 0.00 0.00 43.62 3.10
49 50 2.237643 AGGCATGGTACGTATGGTTCAA 59.762 45.455 0.00 0.00 0.00 2.69
60 61 9.498307 GGTACGTATGGTTCAAGAATTAATTTG 57.502 33.333 1.43 0.00 0.00 2.32
92 93 5.743872 CGTTTTTCTTGAAACTTCCTCTTGG 59.256 40.000 0.00 0.00 37.37 3.61
169 171 4.101077 CTCCCTGCCCTCCCTCCT 62.101 72.222 0.00 0.00 0.00 3.69
170 172 2.623763 TCCCTGCCCTCCCTCCTA 60.624 66.667 0.00 0.00 0.00 2.94
171 173 2.446802 CCCTGCCCTCCCTCCTAC 60.447 72.222 0.00 0.00 0.00 3.18
172 174 2.368594 CCTGCCCTCCCTCCTACA 59.631 66.667 0.00 0.00 0.00 2.74
173 175 1.764054 CCTGCCCTCCCTCCTACAG 60.764 68.421 0.00 0.00 0.00 2.74
174 176 2.365635 TGCCCTCCCTCCTACAGC 60.366 66.667 0.00 0.00 0.00 4.40
175 177 3.164977 GCCCTCCCTCCTACAGCC 61.165 72.222 0.00 0.00 0.00 4.85
176 178 2.699496 CCCTCCCTCCTACAGCCT 59.301 66.667 0.00 0.00 0.00 4.58
177 179 1.764054 CCCTCCCTCCTACAGCCTG 60.764 68.421 0.00 0.00 0.00 4.85
178 180 1.764054 CCTCCCTCCTACAGCCTGG 60.764 68.421 0.00 0.00 0.00 4.45
179 181 1.002274 CTCCCTCCTACAGCCTGGT 59.998 63.158 0.00 0.00 0.00 4.00
180 182 0.261991 CTCCCTCCTACAGCCTGGTA 59.738 60.000 0.00 0.00 0.00 3.25
181 183 0.032416 TCCCTCCTACAGCCTGGTAC 60.032 60.000 0.00 0.00 0.00 3.34
216 218 2.935955 GCCGTCGTTGGTGAAGTG 59.064 61.111 0.00 0.00 0.00 3.16
256 258 3.686622 GCATTGGCGGTGAGATCTA 57.313 52.632 0.00 0.00 0.00 1.98
294 296 2.956964 CGGAGGCAGCGTCGATTC 60.957 66.667 8.97 0.00 0.00 2.52
297 299 1.153549 GAGGCAGCGTCGATTCCTT 60.154 57.895 2.56 0.00 0.00 3.36
305 307 1.589196 GTCGATTCCTTCTCCGGCG 60.589 63.158 0.00 0.00 0.00 6.46
361 363 3.480133 GGAGGTATGGCGGCAGGT 61.480 66.667 19.29 3.67 0.00 4.00
383 385 0.247736 GCCCGGTCTGAGCCTATATG 59.752 60.000 0.00 0.00 0.00 1.78
384 386 0.898320 CCCGGTCTGAGCCTATATGG 59.102 60.000 0.00 0.00 39.35 2.74
418 420 1.083489 GCCATGCTTGTAGTTACGCA 58.917 50.000 0.00 0.00 36.75 5.24
426 428 0.963225 TGTAGTTACGCAGCACTCCA 59.037 50.000 0.00 0.00 0.00 3.86
455 457 0.947960 CACGTGCATGTTTGGGTGTA 59.052 50.000 9.37 0.00 0.00 2.90
525 527 2.663196 CTCCTTCCGGTGGTGGTC 59.337 66.667 14.11 0.00 0.00 4.02
531 533 2.677524 CCGGTGGTGGTCGGTCTA 60.678 66.667 0.00 0.00 41.23 2.59
547 549 3.431626 CGGTCTATTGATGGTTGGTGCTA 60.432 47.826 0.00 0.00 0.00 3.49
549 551 3.561725 GTCTATTGATGGTTGGTGCTAGC 59.438 47.826 8.10 8.10 0.00 3.42
559 561 0.975556 TGGTGCTAGCGGATCTTGGA 60.976 55.000 10.77 0.00 0.00 3.53
566 568 0.181350 AGCGGATCTTGGAATCCCAC 59.819 55.000 0.00 0.00 43.41 4.61
596 598 2.897271 AGTGGTGGCATGATGGTTAA 57.103 45.000 0.00 0.00 0.00 2.01
603 605 2.301346 GGCATGATGGTTAAGTGGAGG 58.699 52.381 0.00 0.00 0.00 4.30
624 626 0.603707 CTGCGTGACTTGGTGGTGAT 60.604 55.000 0.00 0.00 0.00 3.06
646 648 2.742372 CCGGTTGCGAGTTGGGAG 60.742 66.667 0.00 0.00 0.00 4.30
647 649 2.342279 CGGTTGCGAGTTGGGAGA 59.658 61.111 0.00 0.00 0.00 3.71
648 650 1.738099 CGGTTGCGAGTTGGGAGAG 60.738 63.158 0.00 0.00 0.00 3.20
649 651 1.671742 GGTTGCGAGTTGGGAGAGA 59.328 57.895 0.00 0.00 0.00 3.10
650 652 0.250513 GGTTGCGAGTTGGGAGAGAT 59.749 55.000 0.00 0.00 0.00 2.75
651 653 1.363744 GTTGCGAGTTGGGAGAGATG 58.636 55.000 0.00 0.00 0.00 2.90
653 655 1.522580 GCGAGTTGGGAGAGATGGC 60.523 63.158 0.00 0.00 0.00 4.40
655 657 1.333636 CGAGTTGGGAGAGATGGCCT 61.334 60.000 3.32 0.00 0.00 5.19
741 744 3.513680 TGTTGAAGGCATCATCATTGC 57.486 42.857 0.00 0.00 38.03 3.56
791 794 1.831736 GAGGAGAAACCCTTGATCCGA 59.168 52.381 0.00 0.00 40.05 4.55
795 798 1.555533 AGAAACCCTTGATCCGAGTCC 59.444 52.381 0.00 0.00 0.00 3.85
797 800 0.252742 AACCCTTGATCCGAGTCCCT 60.253 55.000 0.00 0.00 0.00 4.20
800 803 0.749649 CCTTGATCCGAGTCCCTCAG 59.250 60.000 0.00 0.00 0.00 3.35
804 807 0.878416 GATCCGAGTCCCTCAGATCG 59.122 60.000 2.62 0.00 35.57 3.69
813 816 1.109920 CCCTCAGATCGGACGATGGT 61.110 60.000 12.40 0.00 34.60 3.55
815 818 0.031314 CTCAGATCGGACGATGGTGG 59.969 60.000 12.40 0.00 34.60 4.61
823 826 1.429148 GGACGATGGTGGCGCTTTAG 61.429 60.000 7.64 0.00 0.00 1.85
836 839 3.437049 GGCGCTTTAGATGTCATTATCCC 59.563 47.826 7.64 0.00 0.00 3.85
874 877 4.873129 AGCGGCGTGGCATCTACG 62.873 66.667 9.37 0.00 43.93 3.51
875 878 4.865761 GCGGCGTGGCATCTACGA 62.866 66.667 9.37 0.00 43.82 3.43
922 925 2.638480 TGGTGCAGCAAAGTCTTAGT 57.362 45.000 17.80 0.00 0.00 2.24
961 964 5.693104 GCAGCATATGTAATCCCATTTGTTG 59.307 40.000 4.29 0.00 37.73 3.33
964 967 7.980662 CAGCATATGTAATCCCATTTGTTGAAA 59.019 33.333 4.29 0.00 37.25 2.69
1037 1040 9.125026 ACATTCACTCAAACAAAAAGAGACTAT 57.875 29.630 0.00 0.00 33.69 2.12
1062 1065 2.371179 TGCATTGCCATTCCCTCAAAAA 59.629 40.909 6.12 0.00 0.00 1.94
1065 1068 4.624604 GCATTGCCATTCCCTCAAAAAGAT 60.625 41.667 0.00 0.00 0.00 2.40
1142 1145 6.126863 TCTTTTCTCTTTTGATGGGAGCTA 57.873 37.500 0.00 0.00 0.00 3.32
1148 1151 3.782523 TCTTTTGATGGGAGCTACCTCAT 59.217 43.478 18.18 0.99 39.96 2.90
1154 1157 3.845781 TGGGAGCTACCTCATTGATTC 57.154 47.619 18.18 0.00 39.96 2.52
1302 1307 4.285260 CACCACTTGTTAGTAACCCTACCT 59.715 45.833 10.51 0.00 31.96 3.08
1370 1375 7.538575 ACAGAGTAATGCTTTGCGAAATTTAT 58.461 30.769 0.00 0.00 33.03 1.40
1388 1393 9.271828 GAAATTTATTGAAATGTTTCACCAGGT 57.728 29.630 7.63 0.00 45.99 4.00
1486 1494 8.514594 TGAACTGATTCGAAATTGAATTAAGCT 58.485 29.630 0.00 0.00 38.65 3.74
1514 1522 5.896073 ACCATATTTGTTTTTGGGTTGGA 57.104 34.783 0.00 0.00 33.39 3.53
1547 1555 7.122650 CCTCATTACCATGTTCTATTTTGGTGT 59.877 37.037 3.78 0.00 42.32 4.16
1548 1556 7.825681 TCATTACCATGTTCTATTTTGGTGTG 58.174 34.615 3.78 3.49 42.32 3.82
1569 1577 6.094048 GTGTGATGGTGCACTATCTAAAATGT 59.906 38.462 34.23 5.85 39.49 2.71
1571 1579 6.540189 GTGATGGTGCACTATCTAAAATGTCT 59.460 38.462 34.23 4.61 35.24 3.41
1633 1642 3.395639 TGCTCAAACCTAAGTTGGTACG 58.604 45.455 0.00 0.00 39.83 3.67
1645 1654 3.531538 AGTTGGTACGGATATGCACAAG 58.468 45.455 0.00 0.00 0.00 3.16
1652 1661 6.091437 GGTACGGATATGCACAAGTATCTAC 58.909 44.000 0.00 0.00 0.00 2.59
1857 1877 9.328721 GCATTACATTTAACAAAATTTTCAGGC 57.671 29.630 0.00 0.00 0.00 4.85
2088 2115 1.507141 CGTTGGTTCTGTCTGGGTGC 61.507 60.000 0.00 0.00 0.00 5.01
2119 2151 9.581289 TCTTGATTACCATTTTACTTTTCAGGA 57.419 29.630 0.00 0.00 0.00 3.86
2147 2179 4.844655 ACCTATTTGTGTGTAGAGGTTCCT 59.155 41.667 0.00 0.00 33.46 3.36
2155 2187 3.515502 TGTGTAGAGGTTCCTGATTCTGG 59.484 47.826 3.27 3.27 0.00 3.86
2217 2258 9.507280 CAGTTAAGATTAATGTTGTATTGGCTG 57.493 33.333 8.05 2.95 0.00 4.85
2225 2266 0.883153 TTGTATTGGCTGTGCTGCTG 59.117 50.000 0.00 0.00 0.00 4.41
2368 2426 5.835819 AGATCACCGAATTGATTCCTCTCTA 59.164 40.000 0.00 0.00 36.30 2.43
2498 2565 9.227777 ACTAGAACGGAGTAATGCTTTAAAAAT 57.772 29.630 0.00 0.00 45.00 1.82
2525 2593 6.140303 TCGTGATATTACACCAGTCCTTAC 57.860 41.667 0.00 0.00 37.48 2.34
2526 2594 5.068198 TCGTGATATTACACCAGTCCTTACC 59.932 44.000 0.00 0.00 37.48 2.85
2550 2618 6.750039 CCGTCAATTTTTGTTGTAAGAAGTGT 59.250 34.615 0.00 0.00 0.00 3.55
2669 2759 4.086457 GGTCCTTCCACATTACCATGTTT 58.914 43.478 0.00 0.00 41.16 2.83
2671 2761 5.011635 GGTCCTTCCACATTACCATGTTTTT 59.988 40.000 0.00 0.00 41.16 1.94
2815 3618 6.540189 TCTGAATTAGTTGCATCTTCTTAGCC 59.460 38.462 1.93 0.00 0.00 3.93
2817 3620 6.658816 TGAATTAGTTGCATCTTCTTAGCCAA 59.341 34.615 1.93 0.00 0.00 4.52
2843 3647 0.695462 AGGAGCCTGCCATGGTATGA 60.695 55.000 14.67 0.00 0.00 2.15
2873 3677 6.900568 TGATTGTTTGTTTTGTTGTGATCC 57.099 33.333 0.00 0.00 0.00 3.36
2881 3685 6.900568 TGTTTTGTTGTGATCCAAAATCAC 57.099 33.333 10.48 10.48 46.28 3.06
2944 3748 1.335132 TGAAGCTCCCCCGTGGTATC 61.335 60.000 0.00 0.00 34.77 2.24
2951 3755 1.006102 CCCCGTGGTATCGATCAGC 60.006 63.158 0.00 0.00 0.00 4.26
2952 3756 1.371758 CCCGTGGTATCGATCAGCG 60.372 63.158 0.00 2.88 42.69 5.18
2961 3765 3.057456 GGTATCGATCAGCGTTGACCTAT 60.057 47.826 3.33 0.00 41.80 2.57
2994 3798 7.488471 GCTGTTATATATACCTCTTGTAAGCCG 59.512 40.741 0.00 0.00 31.94 5.52
3001 3805 0.163788 CTCTTGTAAGCCGTTGCACG 59.836 55.000 0.00 0.00 42.11 5.34
3015 3819 3.270877 GTTGCACGGGATAAGTTGATCT 58.729 45.455 0.00 0.00 0.00 2.75
3066 3871 2.810274 CCCGATATGTGAAGATTGGCTG 59.190 50.000 0.00 0.00 0.00 4.85
3085 3890 3.601685 CTGGCGCCCACGGTTTTT 61.602 61.111 26.77 0.00 40.57 1.94
3093 3898 1.520600 CCCACGGTTTTTCCCCTTCG 61.521 60.000 0.00 0.00 0.00 3.79
3099 3904 2.031769 CGGTTTTTCCCCTTCGTGTTAC 60.032 50.000 0.00 0.00 0.00 2.50
3109 3914 2.953648 CCTTCGTGTTACAGGGGTTTTT 59.046 45.455 5.20 0.00 0.00 1.94
3135 3940 2.887151 AAATCCTTGTGTCCCCTCTG 57.113 50.000 0.00 0.00 0.00 3.35
3138 3943 1.640917 TCCTTGTGTCCCCTCTGTAC 58.359 55.000 0.00 0.00 0.00 2.90
3140 3945 1.276421 CCTTGTGTCCCCTCTGTACTG 59.724 57.143 0.00 0.00 0.00 2.74
3145 3950 3.260884 TGTGTCCCCTCTGTACTGATTTC 59.739 47.826 2.62 0.00 0.00 2.17
3151 3956 4.154195 CCCCTCTGTACTGATTTCGTTTTG 59.846 45.833 2.62 0.00 0.00 2.44
3161 3966 3.661728 TGATTTCGTTTTGCATCGTTTCG 59.338 39.130 0.00 0.00 0.00 3.46
3172 3977 0.931702 ATCGTTTCGTTTGCGTGTCA 59.068 45.000 0.00 0.00 39.49 3.58
3178 3983 4.323751 GTTTCGTTTGCGTGTCATATCTC 58.676 43.478 0.00 0.00 39.49 2.75
3179 3984 3.503827 TCGTTTGCGTGTCATATCTCT 57.496 42.857 0.00 0.00 39.49 3.10
3180 3985 4.625972 TCGTTTGCGTGTCATATCTCTA 57.374 40.909 0.00 0.00 39.49 2.43
3181 3986 4.989044 TCGTTTGCGTGTCATATCTCTAA 58.011 39.130 0.00 0.00 39.49 2.10
3182 3987 4.796830 TCGTTTGCGTGTCATATCTCTAAC 59.203 41.667 0.00 0.00 39.49 2.34
3188 3993 5.748630 TGCGTGTCATATCTCTAACATTGTC 59.251 40.000 0.00 0.00 0.00 3.18
3193 3998 9.371136 GTGTCATATCTCTAACATTGTCTTCAA 57.629 33.333 0.00 0.00 37.98 2.69
3194 3999 9.942850 TGTCATATCTCTAACATTGTCTTCAAA 57.057 29.630 0.00 0.00 37.11 2.69
3250 4113 7.039784 AGCAACATTGTACTTTATGGTTGATGT 60.040 33.333 0.00 0.00 0.00 3.06
3299 4162 7.879677 CCTCTACATGATTTAGGAACATGCATA 59.120 37.037 0.00 0.00 43.21 3.14
3537 4407 9.556030 GTATAACTTTGTAAGATTCTTGTTGCC 57.444 33.333 9.22 0.00 0.00 4.52
3572 4442 7.141363 GTGAATAGTATTGATCACCATTTGCC 58.859 38.462 0.00 0.00 36.94 4.52
3623 4493 1.418264 TGTTCCGGATTGTGAGGTGAA 59.582 47.619 4.15 0.00 0.00 3.18
3684 4554 4.070716 CTGAAGAACAGTTTGAGCCAGAT 58.929 43.478 0.00 0.00 41.30 2.90
3688 4558 6.545666 TGAAGAACAGTTTGAGCCAGATAAAA 59.454 34.615 0.00 0.00 0.00 1.52
3750 4620 3.453717 AGCTTGAGATGGTGAGCTTATCA 59.546 43.478 0.00 0.00 42.46 2.15
3768 4638 7.890655 AGCTTATCACTTGTCCTTCCTTATTTT 59.109 33.333 0.00 0.00 0.00 1.82
3784 4654 7.944061 TCCTTATTTTTCACATGGATGCTATG 58.056 34.615 0.00 0.00 0.00 2.23
3884 4779 6.649557 GCTAGTACTTCTTTTTCAGCACCTAA 59.350 38.462 0.00 0.00 0.00 2.69
3924 4819 9.681692 CAATGATTGAAGTTTTTGATAGACACA 57.318 29.630 0.00 0.00 0.00 3.72
3931 4826 4.682860 AGTTTTTGATAGACACACCGTACG 59.317 41.667 8.69 8.69 0.00 3.67
3936 4831 0.034186 TAGACACACCGTACGGGGAT 60.034 55.000 41.72 28.43 42.48 3.85
4005 4900 7.448161 TGTCTTCTAGAATTTTTGGCTTGATGA 59.552 33.333 5.44 0.00 0.00 2.92
4006 4901 8.465201 GTCTTCTAGAATTTTTGGCTTGATGAT 58.535 33.333 5.44 0.00 0.00 2.45
4007 4902 8.464404 TCTTCTAGAATTTTTGGCTTGATGATG 58.536 33.333 5.44 0.00 0.00 3.07
4018 4913 4.240096 GGCTTGATGATGTTTGTTTCAGG 58.760 43.478 0.00 0.00 0.00 3.86
4087 4983 5.057819 AGACTGCTTATCTCTTGCATGATG 58.942 41.667 2.33 0.00 36.07 3.07
4143 5039 8.535690 TCTTTCGACTTCTTCTAAAGGATTTC 57.464 34.615 0.00 0.00 40.09 2.17
4230 5126 3.973305 TGATATGTTACCCTGGAGCATCA 59.027 43.478 0.00 0.00 36.25 3.07
4243 5139 7.102346 CCCTGGAGCATCATATAAAGTCTTAG 58.898 42.308 0.00 0.00 36.25 2.18
4268 5164 6.176183 CCCCTGATGAGGTGAATCATAATAC 58.824 44.000 0.00 0.00 40.02 1.89
4404 5301 8.389603 GCTCATGCATCTAGATATAAAAGAAGC 58.610 37.037 4.54 2.01 39.41 3.86
4453 5350 5.161358 TCTACAAACATGTTGCTAGACTCG 58.839 41.667 12.82 0.00 0.00 4.18
4460 5357 4.867047 ACATGTTGCTAGACTCGATTCAAG 59.133 41.667 5.50 0.00 0.00 3.02
4523 5420 1.285578 GCTAAAGAAGCGCAGGAGAG 58.714 55.000 11.47 0.00 42.53 3.20
4546 5443 2.935201 GCAGGTGTCAGAGATTAAGCAG 59.065 50.000 0.00 0.00 0.00 4.24
4552 5449 2.799412 GTCAGAGATTAAGCAGCCATCG 59.201 50.000 0.00 0.00 0.00 3.84
4676 5586 5.426509 TCTCTCAGCAGGAAATTAATCTCCA 59.573 40.000 10.47 0.00 33.83 3.86
4692 5602 0.250858 TCCACGGTCCGTCAGAGTAA 60.251 55.000 15.67 0.00 38.32 2.24
4701 5611 2.832129 TCCGTCAGAGTAAGGATGCTTT 59.168 45.455 4.26 0.00 0.00 3.51
4758 5669 1.202698 GGTTGGGATGCTTCGAGCTAT 60.203 52.381 8.07 1.63 42.97 2.97
4759 5670 2.037251 GGTTGGGATGCTTCGAGCTATA 59.963 50.000 8.07 0.00 42.97 1.31
4760 5671 3.307059 GGTTGGGATGCTTCGAGCTATAT 60.307 47.826 8.07 0.00 42.97 0.86
4824 5737 2.768253 TCCAGTGTCTCGCATTGATT 57.232 45.000 0.00 0.00 37.02 2.57
4837 5750 3.624410 CGCATTGATTCATCCAGAGTTCA 59.376 43.478 0.00 0.00 0.00 3.18
4861 5774 4.563630 CGGGTGACGTTCGATTGA 57.436 55.556 0.00 0.00 37.93 2.57
4862 5775 2.359792 CGGGTGACGTTCGATTGAG 58.640 57.895 0.00 0.00 37.93 3.02
4870 5783 3.242518 GACGTTCGATTGAGATCACACA 58.757 45.455 0.00 0.00 32.33 3.72
4901 5846 6.881065 TGGAAATTTCTAGTCAAGAGTCCATG 59.119 38.462 17.42 0.00 35.05 3.66
4902 5847 6.183360 GGAAATTTCTAGTCAAGAGTCCATGC 60.183 42.308 17.42 0.00 35.05 4.06
4903 5848 4.890158 TTTCTAGTCAAGAGTCCATGCA 57.110 40.909 0.00 0.00 35.05 3.96
4904 5849 3.876274 TCTAGTCAAGAGTCCATGCAC 57.124 47.619 0.00 0.00 0.00 4.57
4905 5850 3.165071 TCTAGTCAAGAGTCCATGCACA 58.835 45.455 0.00 0.00 0.00 4.57
4906 5851 3.771479 TCTAGTCAAGAGTCCATGCACAT 59.229 43.478 0.00 0.00 0.00 3.21
4907 5852 4.956075 TCTAGTCAAGAGTCCATGCACATA 59.044 41.667 0.00 0.00 0.00 2.29
4908 5853 4.767578 AGTCAAGAGTCCATGCACATAT 57.232 40.909 0.00 0.00 0.00 1.78
4909 5854 4.701765 AGTCAAGAGTCCATGCACATATC 58.298 43.478 0.00 0.00 0.00 1.63
4910 5855 4.408270 AGTCAAGAGTCCATGCACATATCT 59.592 41.667 0.00 0.00 0.00 1.98
4911 5856 5.600069 AGTCAAGAGTCCATGCACATATCTA 59.400 40.000 0.00 0.00 0.00 1.98
4912 5857 5.694006 GTCAAGAGTCCATGCACATATCTAC 59.306 44.000 0.00 0.00 0.00 2.59
4913 5858 5.600069 TCAAGAGTCCATGCACATATCTACT 59.400 40.000 0.00 0.00 0.00 2.57
4914 5859 5.720371 AGAGTCCATGCACATATCTACTC 57.280 43.478 0.00 0.00 33.86 2.59
4915 5860 4.526262 AGAGTCCATGCACATATCTACTCC 59.474 45.833 0.00 0.00 34.10 3.85
4916 5861 3.580458 AGTCCATGCACATATCTACTCCC 59.420 47.826 0.00 0.00 0.00 4.30
4917 5862 3.580458 GTCCATGCACATATCTACTCCCT 59.420 47.826 0.00 0.00 0.00 4.20
4918 5863 3.834813 TCCATGCACATATCTACTCCCTC 59.165 47.826 0.00 0.00 0.00 4.30
4919 5864 3.055530 CCATGCACATATCTACTCCCTCC 60.056 52.174 0.00 0.00 0.00 4.30
4920 5865 3.619900 TGCACATATCTACTCCCTCCT 57.380 47.619 0.00 0.00 0.00 3.69
4921 5866 3.928754 TGCACATATCTACTCCCTCCTT 58.071 45.455 0.00 0.00 0.00 3.36
4922 5867 4.298626 TGCACATATCTACTCCCTCCTTT 58.701 43.478 0.00 0.00 0.00 3.11
4923 5868 4.345257 TGCACATATCTACTCCCTCCTTTC 59.655 45.833 0.00 0.00 0.00 2.62
4924 5869 4.262678 GCACATATCTACTCCCTCCTTTCC 60.263 50.000 0.00 0.00 0.00 3.13
4925 5870 5.151454 CACATATCTACTCCCTCCTTTCCT 58.849 45.833 0.00 0.00 0.00 3.36
4926 5871 6.315714 CACATATCTACTCCCTCCTTTCCTA 58.684 44.000 0.00 0.00 0.00 2.94
4927 5872 6.782988 CACATATCTACTCCCTCCTTTCCTAA 59.217 42.308 0.00 0.00 0.00 2.69
4928 5873 7.290248 CACATATCTACTCCCTCCTTTCCTAAA 59.710 40.741 0.00 0.00 0.00 1.85
4929 5874 7.290481 ACATATCTACTCCCTCCTTTCCTAAAC 59.710 40.741 0.00 0.00 0.00 2.01
4930 5875 5.019657 TCTACTCCCTCCTTTCCTAAACA 57.980 43.478 0.00 0.00 0.00 2.83
4931 5876 5.600749 TCTACTCCCTCCTTTCCTAAACAT 58.399 41.667 0.00 0.00 0.00 2.71
4932 5877 4.846168 ACTCCCTCCTTTCCTAAACATC 57.154 45.455 0.00 0.00 0.00 3.06
4933 5878 4.439860 ACTCCCTCCTTTCCTAAACATCT 58.560 43.478 0.00 0.00 0.00 2.90
4934 5879 4.226168 ACTCCCTCCTTTCCTAAACATCTG 59.774 45.833 0.00 0.00 0.00 2.90
4935 5880 4.175962 TCCCTCCTTTCCTAAACATCTGT 58.824 43.478 0.00 0.00 0.00 3.41
4936 5881 4.225267 TCCCTCCTTTCCTAAACATCTGTC 59.775 45.833 0.00 0.00 0.00 3.51
4937 5882 4.226168 CCCTCCTTTCCTAAACATCTGTCT 59.774 45.833 0.00 0.00 0.00 3.41
4938 5883 5.280727 CCCTCCTTTCCTAAACATCTGTCTT 60.281 44.000 0.00 0.00 0.00 3.01
4939 5884 6.241645 CCTCCTTTCCTAAACATCTGTCTTT 58.758 40.000 0.00 0.00 0.00 2.52
4940 5885 6.717084 CCTCCTTTCCTAAACATCTGTCTTTT 59.283 38.462 0.00 0.00 0.00 2.27
4941 5886 7.231519 CCTCCTTTCCTAAACATCTGTCTTTTT 59.768 37.037 0.00 0.00 0.00 1.94
4942 5887 9.284968 CTCCTTTCCTAAACATCTGTCTTTTTA 57.715 33.333 0.00 0.00 0.00 1.52
4943 5888 9.635404 TCCTTTCCTAAACATCTGTCTTTTTAA 57.365 29.630 0.00 0.00 0.00 1.52
4970 5915 9.293404 AGATTTCAAATGGACTATCACATATGG 57.707 33.333 7.80 0.00 0.00 2.74
4971 5916 9.288576 GATTTCAAATGGACTATCACATATGGA 57.711 33.333 7.80 2.05 0.00 3.41
4972 5917 9.818270 ATTTCAAATGGACTATCACATATGGAT 57.182 29.630 7.80 9.38 0.00 3.41
4973 5918 8.625786 TTCAAATGGACTATCACATATGGATG 57.374 34.615 7.80 0.00 39.16 3.51
4975 5920 8.879227 TCAAATGGACTATCACATATGGATGTA 58.121 33.333 7.80 0.00 44.82 2.29
4976 5921 9.676861 CAAATGGACTATCACATATGGATGTAT 57.323 33.333 7.80 0.00 44.82 2.29
5016 5961 8.538409 AAGTGTAAATTCATTCATTTTGCTCC 57.462 30.769 0.00 0.00 0.00 4.70
5017 5962 6.808212 AGTGTAAATTCATTCATTTTGCTCCG 59.192 34.615 0.00 0.00 0.00 4.63
5018 5963 6.586082 GTGTAAATTCATTCATTTTGCTCCGT 59.414 34.615 0.00 0.00 0.00 4.69
5019 5964 7.753132 GTGTAAATTCATTCATTTTGCTCCGTA 59.247 33.333 0.00 0.00 0.00 4.02
5020 5965 8.465999 TGTAAATTCATTCATTTTGCTCCGTAT 58.534 29.630 0.00 0.00 0.00 3.06
5021 5966 7.760131 AAATTCATTCATTTTGCTCCGTATG 57.240 32.000 0.00 0.00 0.00 2.39
5022 5967 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
5023 5968 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
5024 5969 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
5025 5970 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
5026 5971 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
5027 5972 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
5028 5973 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
5029 5974 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
5030 5975 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
5031 5976 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
5032 5977 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
5033 5978 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
5034 5979 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
5035 5980 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
5036 5981 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
5037 5982 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
5038 5983 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
5039 5984 6.367695 TCCGTATGTAGTCACTTGTTGAAATG 59.632 38.462 0.00 0.00 35.39 2.32
5040 5985 6.147164 CCGTATGTAGTCACTTGTTGAAATGT 59.853 38.462 0.00 0.00 35.39 2.71
5041 5986 7.227461 CGTATGTAGTCACTTGTTGAAATGTC 58.773 38.462 0.00 0.00 35.39 3.06
5042 5987 7.116376 CGTATGTAGTCACTTGTTGAAATGTCT 59.884 37.037 0.00 0.00 35.39 3.41
5043 5988 9.419297 GTATGTAGTCACTTGTTGAAATGTCTA 57.581 33.333 0.00 0.00 35.39 2.59
5044 5989 7.946655 TGTAGTCACTTGTTGAAATGTCTAG 57.053 36.000 0.00 0.00 35.39 2.43
5045 5990 7.722363 TGTAGTCACTTGTTGAAATGTCTAGA 58.278 34.615 0.00 0.00 35.39 2.43
5046 5991 8.201464 TGTAGTCACTTGTTGAAATGTCTAGAA 58.799 33.333 0.00 0.00 35.39 2.10
5047 5992 9.042008 GTAGTCACTTGTTGAAATGTCTAGAAA 57.958 33.333 0.00 0.00 35.39 2.52
5048 5993 8.147642 AGTCACTTGTTGAAATGTCTAGAAAG 57.852 34.615 0.00 0.00 35.39 2.62
5049 5994 7.987458 AGTCACTTGTTGAAATGTCTAGAAAGA 59.013 33.333 0.00 0.00 35.39 2.52
5050 5995 8.064814 GTCACTTGTTGAAATGTCTAGAAAGAC 58.935 37.037 0.00 0.00 43.53 3.01
5069 6014 9.908152 AGAAAGACAAATATTTAAAAACGGAGG 57.092 29.630 0.00 0.00 0.00 4.30
5070 6015 9.135843 GAAAGACAAATATTTAAAAACGGAGGG 57.864 33.333 0.00 0.00 0.00 4.30
5071 6016 8.411991 AAGACAAATATTTAAAAACGGAGGGA 57.588 30.769 0.00 0.00 0.00 4.20
5072 6017 8.051901 AGACAAATATTTAAAAACGGAGGGAG 57.948 34.615 0.00 0.00 0.00 4.30
5073 6018 7.668469 AGACAAATATTTAAAAACGGAGGGAGT 59.332 33.333 0.00 0.00 0.00 3.85
5074 6019 8.866970 ACAAATATTTAAAAACGGAGGGAGTA 57.133 30.769 0.00 0.00 0.00 2.59
5075 6020 8.953313 ACAAATATTTAAAAACGGAGGGAGTAG 58.047 33.333 0.00 0.00 0.00 2.57
5076 6021 8.403236 CAAATATTTAAAAACGGAGGGAGTAGG 58.597 37.037 0.00 0.00 0.00 3.18
5077 6022 5.767277 ATTTAAAAACGGAGGGAGTAGGA 57.233 39.130 0.00 0.00 0.00 2.94
5078 6023 5.565455 TTTAAAAACGGAGGGAGTAGGAA 57.435 39.130 0.00 0.00 0.00 3.36
5079 6024 5.565455 TTAAAAACGGAGGGAGTAGGAAA 57.435 39.130 0.00 0.00 0.00 3.13
5080 6025 3.413846 AAAACGGAGGGAGTAGGAAAC 57.586 47.619 0.00 0.00 0.00 2.78
5082 6027 1.558233 ACGGAGGGAGTAGGAAACTG 58.442 55.000 0.00 0.00 43.88 3.16
5083 6028 0.824759 CGGAGGGAGTAGGAAACTGG 59.175 60.000 0.00 0.00 43.88 4.00
5084 6029 0.542333 GGAGGGAGTAGGAAACTGGC 59.458 60.000 0.00 0.00 43.88 4.85
5085 6030 1.276622 GAGGGAGTAGGAAACTGGCA 58.723 55.000 0.00 0.00 43.88 4.92
5086 6031 0.984995 AGGGAGTAGGAAACTGGCAC 59.015 55.000 0.00 0.00 43.88 5.01
5087 6032 0.984995 GGGAGTAGGAAACTGGCACT 59.015 55.000 0.00 0.00 43.88 4.40
5088 6033 1.066071 GGGAGTAGGAAACTGGCACTC 60.066 57.143 0.00 0.00 43.88 3.51
5089 6034 2.388310 GAGTAGGAAACTGGCACTCC 57.612 55.000 0.00 0.00 43.88 3.85
5090 6035 1.903183 GAGTAGGAAACTGGCACTCCT 59.097 52.381 11.61 11.61 43.88 3.69
5091 6036 3.097614 GAGTAGGAAACTGGCACTCCTA 58.902 50.000 9.98 9.98 43.88 2.94
5092 6037 3.707102 GAGTAGGAAACTGGCACTCCTAT 59.293 47.826 14.95 7.42 42.41 2.57
5093 6038 4.104831 AGTAGGAAACTGGCACTCCTATT 58.895 43.478 14.95 10.14 42.41 1.73
5094 6039 4.536489 AGTAGGAAACTGGCACTCCTATTT 59.464 41.667 14.95 7.28 42.41 1.40
5095 6040 4.388577 AGGAAACTGGCACTCCTATTTT 57.611 40.909 6.30 0.00 41.13 1.82
5096 6041 4.740902 AGGAAACTGGCACTCCTATTTTT 58.259 39.130 6.30 0.00 41.13 1.94
5145 6090 3.244770 CCTCCAGTTTTACCTGCCTGTTA 60.245 47.826 0.00 0.00 0.00 2.41
5147 6092 2.817844 CCAGTTTTACCTGCCTGTTACC 59.182 50.000 0.00 0.00 0.00 2.85
5213 6160 5.177326 AGTTGACGTGTCTAGTAGGAGTAG 58.823 45.833 0.00 0.00 0.00 2.57
5287 6238 2.159296 AGTTGTTTTGACCTGGCGTTTC 60.159 45.455 0.00 0.00 0.00 2.78
5292 6244 4.226761 GTTTTGACCTGGCGTTTCTTATG 58.773 43.478 0.00 0.00 0.00 1.90
5293 6245 3.410631 TTGACCTGGCGTTTCTTATGA 57.589 42.857 0.00 0.00 0.00 2.15
5296 6248 2.540101 GACCTGGCGTTTCTTATGATCG 59.460 50.000 0.00 0.00 0.00 3.69
5300 6252 2.201732 GGCGTTTCTTATGATCGCTGA 58.798 47.619 19.59 0.00 41.66 4.26
5303 6255 4.090642 GGCGTTTCTTATGATCGCTGATAG 59.909 45.833 19.59 0.00 41.66 2.08
5315 6267 1.135083 CGCTGATAGTTGACGGGAAGT 60.135 52.381 0.00 0.00 0.00 3.01
5318 6270 3.254060 CTGATAGTTGACGGGAAGTGTG 58.746 50.000 0.00 0.00 0.00 3.82
5326 6278 0.036732 ACGGGAAGTGTGATGCATGT 59.963 50.000 2.46 0.00 0.00 3.21
5327 6279 1.167851 CGGGAAGTGTGATGCATGTT 58.832 50.000 2.46 0.00 0.00 2.71
5328 6280 1.135603 CGGGAAGTGTGATGCATGTTG 60.136 52.381 2.46 0.00 0.00 3.33
5329 6281 1.203052 GGGAAGTGTGATGCATGTTGG 59.797 52.381 2.46 0.00 0.00 3.77
5330 6282 1.403249 GGAAGTGTGATGCATGTTGGC 60.403 52.381 2.46 0.00 0.00 4.52
5344 6296 5.186996 CATGTTGGCATGTTAATACTCCC 57.813 43.478 0.00 0.00 45.48 4.30
5345 6297 4.584638 TGTTGGCATGTTAATACTCCCT 57.415 40.909 0.00 0.00 0.00 4.20
5346 6298 4.523083 TGTTGGCATGTTAATACTCCCTC 58.477 43.478 0.00 0.00 0.00 4.30
5347 6299 3.857157 TGGCATGTTAATACTCCCTCC 57.143 47.619 0.00 0.00 0.00 4.30
5348 6300 3.119319 TGGCATGTTAATACTCCCTCCA 58.881 45.455 0.00 0.00 0.00 3.86
5349 6301 3.721575 TGGCATGTTAATACTCCCTCCAT 59.278 43.478 0.00 0.00 0.00 3.41
5350 6302 4.167892 TGGCATGTTAATACTCCCTCCATT 59.832 41.667 0.00 0.00 0.00 3.16
5351 6303 5.140454 GGCATGTTAATACTCCCTCCATTT 58.860 41.667 0.00 0.00 0.00 2.32
5352 6304 5.598417 GGCATGTTAATACTCCCTCCATTTT 59.402 40.000 0.00 0.00 0.00 1.82
5353 6305 6.098266 GGCATGTTAATACTCCCTCCATTTTT 59.902 38.462 0.00 0.00 0.00 1.94
5354 6306 7.286775 GGCATGTTAATACTCCCTCCATTTTTA 59.713 37.037 0.00 0.00 0.00 1.52
5355 6307 8.691797 GCATGTTAATACTCCCTCCATTTTTAA 58.308 33.333 0.00 0.00 0.00 1.52
5396 6348 9.221933 AGAGATTTCACTATAGACTACATACGG 57.778 37.037 6.78 0.00 0.00 4.02
5397 6349 9.217278 GAGATTTCACTATAGACTACATACGGA 57.783 37.037 6.78 0.00 0.00 4.69
5398 6350 9.221933 AGATTTCACTATAGACTACATACGGAG 57.778 37.037 6.78 0.00 0.00 4.63
5399 6351 6.798315 TTCACTATAGACTACATACGGAGC 57.202 41.667 6.78 0.00 0.00 4.70
5400 6352 5.861727 TCACTATAGACTACATACGGAGCA 58.138 41.667 6.78 0.00 0.00 4.26
5401 6353 6.293698 TCACTATAGACTACATACGGAGCAA 58.706 40.000 6.78 0.00 0.00 3.91
5402 6354 6.769341 TCACTATAGACTACATACGGAGCAAA 59.231 38.462 6.78 0.00 0.00 3.68
5403 6355 7.283807 TCACTATAGACTACATACGGAGCAAAA 59.716 37.037 6.78 0.00 0.00 2.44
5404 6356 8.082852 CACTATAGACTACATACGGAGCAAAAT 58.917 37.037 6.78 0.00 0.00 1.82
5405 6357 8.082852 ACTATAGACTACATACGGAGCAAAATG 58.917 37.037 6.78 0.00 0.00 2.32
5406 6358 5.339008 AGACTACATACGGAGCAAAATGA 57.661 39.130 0.00 0.00 0.00 2.57
5407 6359 5.352284 AGACTACATACGGAGCAAAATGAG 58.648 41.667 0.00 0.00 0.00 2.90
5408 6360 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
5409 6361 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
5410 6362 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
5411 6363 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
5412 6364 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
5413 6365 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
5414 6366 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
5415 6367 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
5416 6368 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
5417 6369 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
5418 6370 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
5443 6395 9.261180 ACTCTAAAATATGTCAACATACATCCG 57.739 33.333 5.03 0.00 41.15 4.18
5444 6396 9.261180 CTCTAAAATATGTCAACATACATCCGT 57.739 33.333 5.03 0.00 41.15 4.69
5461 6413 6.927416 ACATCCGTATGTAGTTTGTAGTTGA 58.073 36.000 0.00 0.00 44.66 3.18
5462 6414 7.380536 ACATCCGTATGTAGTTTGTAGTTGAA 58.619 34.615 0.00 0.00 44.66 2.69
5463 6415 8.038944 ACATCCGTATGTAGTTTGTAGTTGAAT 58.961 33.333 0.00 0.00 44.66 2.57
5464 6416 9.524106 CATCCGTATGTAGTTTGTAGTTGAATA 57.476 33.333 0.00 0.00 0.00 1.75
5466 6418 9.740239 TCCGTATGTAGTTTGTAGTTGAATATC 57.260 33.333 0.00 0.00 0.00 1.63
5467 6419 9.745880 CCGTATGTAGTTTGTAGTTGAATATCT 57.254 33.333 0.00 0.00 0.00 1.98
5490 6442 8.896722 TCTAAAAAGACTTATACTCCCTCTGT 57.103 34.615 0.00 0.00 0.00 3.41
5491 6443 9.322769 TCTAAAAAGACTTATACTCCCTCTGTT 57.677 33.333 0.00 0.00 0.00 3.16
5492 6444 9.589111 CTAAAAAGACTTATACTCCCTCTGTTC 57.411 37.037 0.00 0.00 0.00 3.18
5493 6445 6.547930 AAAGACTTATACTCCCTCTGTTCC 57.452 41.667 0.00 0.00 0.00 3.62
5494 6446 5.475398 AGACTTATACTCCCTCTGTTCCT 57.525 43.478 0.00 0.00 0.00 3.36
5495 6447 6.593759 AGACTTATACTCCCTCTGTTCCTA 57.406 41.667 0.00 0.00 0.00 2.94
5496 6448 6.982899 AGACTTATACTCCCTCTGTTCCTAA 58.017 40.000 0.00 0.00 0.00 2.69
5497 6449 7.420029 AGACTTATACTCCCTCTGTTCCTAAA 58.580 38.462 0.00 0.00 0.00 1.85
5498 6450 8.068733 AGACTTATACTCCCTCTGTTCCTAAAT 58.931 37.037 0.00 0.00 0.00 1.40
5499 6451 9.364653 GACTTATACTCCCTCTGTTCCTAAATA 57.635 37.037 0.00 0.00 0.00 1.40
5500 6452 9.900112 ACTTATACTCCCTCTGTTCCTAAATAT 57.100 33.333 0.00 0.00 0.00 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 0.176680 ACCATGCCTACTCTCTTGCG 59.823 55.000 0.00 0.00 0.00 4.85
18 19 2.799917 CGTACCATGCCTACTCTCTTGC 60.800 54.545 0.00 0.00 0.00 4.01
25 26 2.674420 ACCATACGTACCATGCCTACT 58.326 47.619 0.00 0.00 0.00 2.57
49 50 9.394477 GAAAAACGTAGCTGACAAATTAATTCT 57.606 29.630 0.10 0.00 0.00 2.40
60 61 5.807344 AGTTTCAAGAAAAACGTAGCTGAC 58.193 37.500 0.00 0.00 42.63 3.51
92 93 3.230976 AGTGACCAAGGGAATCCAAAAC 58.769 45.455 0.09 0.00 34.83 2.43
153 155 2.623763 TAGGAGGGAGGGCAGGGA 60.624 66.667 0.00 0.00 0.00 4.20
156 158 2.439104 GCTGTAGGAGGGAGGGCAG 61.439 68.421 0.00 0.00 0.00 4.85
157 159 2.365635 GCTGTAGGAGGGAGGGCA 60.366 66.667 0.00 0.00 0.00 5.36
159 161 1.764054 CAGGCTGTAGGAGGGAGGG 60.764 68.421 6.28 0.00 0.00 4.30
161 163 0.261991 TACCAGGCTGTAGGAGGGAG 59.738 60.000 14.43 0.00 0.00 4.30
162 164 0.032416 GTACCAGGCTGTAGGAGGGA 60.032 60.000 14.43 0.00 0.00 4.20
163 165 0.032017 AGTACCAGGCTGTAGGAGGG 60.032 60.000 14.43 0.00 0.00 4.30
166 168 0.976073 GGCAGTACCAGGCTGTAGGA 60.976 60.000 14.43 0.00 38.86 2.94
167 169 1.522569 GGCAGTACCAGGCTGTAGG 59.477 63.158 14.43 0.00 38.86 3.18
168 170 0.978146 AGGGCAGTACCAGGCTGTAG 60.978 60.000 14.43 1.04 42.05 2.74
169 171 0.976073 GAGGGCAGTACCAGGCTGTA 60.976 60.000 14.43 3.30 42.05 2.74
170 172 2.203998 AGGGCAGTACCAGGCTGT 60.204 61.111 14.43 4.32 42.05 4.40
171 173 2.586792 GAGGGCAGTACCAGGCTG 59.413 66.667 7.75 7.75 42.05 4.85
172 174 2.689034 GGAGGGCAGTACCAGGCT 60.689 66.667 8.96 0.00 42.05 4.58
173 175 3.798511 GGGAGGGCAGTACCAGGC 61.799 72.222 1.32 1.32 42.05 4.85
174 176 3.090532 GGGGAGGGCAGTACCAGG 61.091 72.222 0.00 0.00 42.05 4.45
175 177 2.041265 AGGGGAGGGCAGTACCAG 59.959 66.667 0.00 0.00 42.05 4.00
176 178 2.040606 GAGGGGAGGGCAGTACCA 59.959 66.667 0.00 0.00 42.05 3.25
177 179 2.768769 GGAGGGGAGGGCAGTACC 60.769 72.222 0.00 0.00 37.93 3.34
178 180 1.762858 GAGGAGGGGAGGGCAGTAC 60.763 68.421 0.00 0.00 0.00 2.73
179 181 1.941820 AGAGGAGGGGAGGGCAGTA 60.942 63.158 0.00 0.00 0.00 2.74
180 182 3.288381 AGAGGAGGGGAGGGCAGT 61.288 66.667 0.00 0.00 0.00 4.40
181 183 2.445654 GAGAGGAGGGGAGGGCAG 60.446 72.222 0.00 0.00 0.00 4.85
247 249 8.046708 TCTAGATCAGAGCCTTATAGATCTCAC 58.953 40.741 0.00 0.00 43.05 3.51
284 286 1.433879 CGGAGAAGGAATCGACGCT 59.566 57.895 0.00 0.00 0.00 5.07
292 294 3.702048 CCCACGCCGGAGAAGGAA 61.702 66.667 13.83 0.00 36.56 3.36
294 296 4.760047 CACCCACGCCGGAGAAGG 62.760 72.222 13.83 14.32 36.56 3.46
305 307 2.730094 CTTGGCTGTTGCACCCAC 59.270 61.111 0.00 0.00 41.91 4.61
335 337 1.674057 CCATACCTCCGGCATCCTC 59.326 63.158 0.00 0.00 0.00 3.71
406 408 1.341852 TGGAGTGCTGCGTAACTACAA 59.658 47.619 1.36 0.00 34.26 2.41
407 409 0.963225 TGGAGTGCTGCGTAACTACA 59.037 50.000 0.00 0.00 34.81 2.74
411 413 2.730672 CGCTGGAGTGCTGCGTAAC 61.731 63.158 24.19 0.00 44.00 2.50
436 438 0.947960 TACACCCAAACATGCACGTG 59.052 50.000 12.28 12.28 0.00 4.49
439 441 0.239879 CCGTACACCCAAACATGCAC 59.760 55.000 0.00 0.00 0.00 4.57
444 446 0.180642 TGAAGCCGTACACCCAAACA 59.819 50.000 0.00 0.00 0.00 2.83
455 457 1.498865 CTTGCAGAACGTGAAGCCGT 61.499 55.000 0.00 0.00 44.23 5.68
525 527 1.670811 GCACCAACCATCAATAGACCG 59.329 52.381 0.00 0.00 0.00 4.79
531 533 1.382522 CGCTAGCACCAACCATCAAT 58.617 50.000 16.45 0.00 0.00 2.57
547 549 0.181350 GTGGGATTCCAAGATCCGCT 59.819 55.000 4.80 0.00 46.04 5.52
549 551 1.160329 GCGTGGGATTCCAAGATCCG 61.160 60.000 10.59 2.65 46.04 4.18
559 561 0.392998 CTAGTGCTTGGCGTGGGATT 60.393 55.000 0.00 0.00 0.00 3.01
566 568 2.034879 CCACCACTAGTGCTTGGCG 61.035 63.158 22.18 10.03 45.83 5.69
596 598 4.008933 GTCACGCAGGCCTCCACT 62.009 66.667 0.00 0.00 0.00 4.00
603 605 3.357079 CCACCAAGTCACGCAGGC 61.357 66.667 0.00 0.00 0.00 4.85
624 626 3.936203 AACTCGCAACCGGCTGGA 61.936 61.111 21.41 1.61 41.67 3.86
645 647 1.661463 TTTCACTGGAGGCCATCTCT 58.339 50.000 5.01 0.00 42.10 3.10
646 648 2.496899 TTTTCACTGGAGGCCATCTC 57.503 50.000 5.01 0.00 41.71 2.75
647 649 2.681976 CGATTTTCACTGGAGGCCATCT 60.682 50.000 5.01 0.00 30.82 2.90
648 650 1.672881 CGATTTTCACTGGAGGCCATC 59.327 52.381 5.01 0.00 30.82 3.51
649 651 1.281867 TCGATTTTCACTGGAGGCCAT 59.718 47.619 5.01 0.00 30.82 4.40
650 652 0.690192 TCGATTTTCACTGGAGGCCA 59.310 50.000 5.01 0.00 0.00 5.36
651 653 1.373570 CTCGATTTTCACTGGAGGCC 58.626 55.000 0.00 0.00 0.00 5.19
653 655 2.275318 GAGCTCGATTTTCACTGGAGG 58.725 52.381 0.00 0.00 0.00 4.30
655 657 1.404181 CGGAGCTCGATTTTCACTGGA 60.404 52.381 7.83 0.00 42.43 3.86
691 694 2.024918 CATAGACACCGCCATTGCC 58.975 57.895 0.00 0.00 0.00 4.52
720 723 3.258622 TGCAATGATGATGCCTTCAACAA 59.741 39.130 1.71 0.00 40.12 2.83
741 744 3.949842 TGAGTGAGGAGATGTTGACTG 57.050 47.619 0.00 0.00 0.00 3.51
795 798 0.031314 CACCATCGTCCGATCTGAGG 59.969 60.000 0.00 1.04 31.62 3.86
797 800 2.016393 GCCACCATCGTCCGATCTGA 62.016 60.000 0.00 0.00 31.62 3.27
800 803 2.658593 CGCCACCATCGTCCGATC 60.659 66.667 0.00 0.00 31.62 3.69
804 807 1.429148 CTAAAGCGCCACCATCGTCC 61.429 60.000 2.29 0.00 0.00 4.79
813 816 4.065088 GGATAATGACATCTAAAGCGCCA 58.935 43.478 2.29 0.00 0.00 5.69
815 818 4.319177 AGGGATAATGACATCTAAAGCGC 58.681 43.478 0.00 0.00 0.00 5.92
819 822 6.209589 CCTCGAGAGGGATAATGACATCTAAA 59.790 42.308 15.71 0.00 44.87 1.85
823 826 4.448537 CCTCGAGAGGGATAATGACATC 57.551 50.000 15.71 0.00 44.87 3.06
845 848 2.387445 CGCCGCTCCAAAACGATGA 61.387 57.895 0.00 0.00 0.00 2.92
874 877 1.009829 GACCCGCTGTCATCAATGTC 58.990 55.000 0.00 0.00 43.85 3.06
875 878 3.159298 GACCCGCTGTCATCAATGT 57.841 52.632 0.00 0.00 43.85 2.71
922 925 1.339535 TGCTGCACCATTAATCCGTCA 60.340 47.619 0.00 0.00 0.00 4.35
935 938 5.221303 ACAAATGGGATTACATATGCTGCAC 60.221 40.000 3.57 0.00 0.00 4.57
961 964 7.138736 TCCTGTCGAGAAACAAATCAAATTTC 58.861 34.615 0.00 0.00 33.40 2.17
964 967 5.997746 TCTCCTGTCGAGAAACAAATCAAAT 59.002 36.000 0.00 0.00 44.94 2.32
1037 1040 1.758280 GAGGGAATGGCAATGCATCAA 59.242 47.619 7.79 0.00 0.00 2.57
1142 1145 4.647564 ACCTTCACTGAATCAATGAGGT 57.352 40.909 9.05 9.05 0.00 3.85
1148 1151 7.054124 AGAAACAAGTACCTTCACTGAATCAA 58.946 34.615 0.00 0.00 0.00 2.57
1154 1157 6.867662 ATGAAGAAACAAGTACCTTCACTG 57.132 37.500 14.92 0.00 45.01 3.66
1172 1175 6.506500 AACTAAGGAGCATCAACAATGAAG 57.493 37.500 0.00 0.00 39.49 3.02
1254 1257 1.735386 CATGTCCAGAAGTCCTGCAG 58.265 55.000 6.78 6.78 41.57 4.41
1256 1259 0.035630 AGCATGTCCAGAAGTCCTGC 60.036 55.000 0.00 0.00 41.57 4.85
1302 1307 9.474313 AAGGCAAGGAAATATGACAATAGTAAA 57.526 29.630 0.00 0.00 0.00 2.01
1512 1520 5.104259 ACATGGTAATGAGGAAAGACTCC 57.896 43.478 0.00 0.00 39.77 3.85
1514 1522 6.380079 AGAACATGGTAATGAGGAAAGACT 57.620 37.500 0.00 0.00 37.24 3.24
1547 1555 6.653020 AGACATTTTAGATAGTGCACCATCA 58.347 36.000 24.22 9.91 0.00 3.07
1548 1556 8.144478 TCTAGACATTTTAGATAGTGCACCATC 58.856 37.037 16.40 16.40 0.00 3.51
1569 1577 8.712228 TTAAGGATCTATTGCAGATGTCTAGA 57.288 34.615 0.00 0.00 44.41 2.43
1633 1642 6.363626 CACTTCGTAGATACTTGTGCATATCC 59.636 42.308 0.00 0.00 35.04 2.59
1645 1654 9.500864 CTAGAAAGTTTACCACTTCGTAGATAC 57.499 37.037 0.00 0.00 45.77 2.24
1652 1661 6.618811 TCTAGCTAGAAAGTTTACCACTTCG 58.381 40.000 21.26 0.00 45.77 3.79
1700 1709 4.457834 AGACGTTCATTCTTGGTAGGAG 57.542 45.455 0.00 0.00 0.00 3.69
1837 1849 5.182950 GGGGGCCTGAAAATTTTGTTAAATG 59.817 40.000 8.47 0.00 34.27 2.32
1857 1877 9.868160 AAACTCTGAAAATATAAATAGAGGGGG 57.132 33.333 0.00 0.00 36.78 5.40
2069 2096 1.507141 GCACCCAGACAGAACCAACG 61.507 60.000 0.00 0.00 0.00 4.10
2088 2115 9.893305 AAAAGTAAAATGGTAATCAAGACTTCG 57.107 29.630 0.00 0.00 0.00 3.79
2119 2151 9.227777 GAACCTCTACACACAAATAGGTTATTT 57.772 33.333 4.64 0.00 45.04 1.40
2147 2179 3.118075 TGCGAATTATCACCCCAGAATCA 60.118 43.478 0.00 0.00 0.00 2.57
2155 2187 0.947244 CAGGCTGCGAATTATCACCC 59.053 55.000 0.00 0.00 0.00 4.61
2217 2258 4.063529 TGCTTGGTACAGCAGCAC 57.936 55.556 3.87 0.00 45.80 4.40
2225 2266 2.033194 GCCAGACGGTGCTTGGTAC 61.033 63.158 0.00 0.00 33.28 3.34
2375 2434 0.607217 CATGCCCAGAAGTGCTGTGA 60.607 55.000 0.00 0.00 43.33 3.58
2381 2441 1.098050 GGTAAGCATGCCCAGAAGTG 58.902 55.000 15.66 0.00 0.00 3.16
2498 2565 5.362717 AGGACTGGTGTAATATCACGATGAA 59.637 40.000 0.00 0.00 39.00 2.57
2512 2579 1.416243 TTGACGGTAAGGACTGGTGT 58.584 50.000 0.00 0.00 36.12 4.16
2525 2593 6.750039 ACACTTCTTACAACAAAAATTGACGG 59.250 34.615 0.00 0.00 33.57 4.79
2526 2594 7.272515 ACACACTTCTTACAACAAAAATTGACG 59.727 33.333 0.00 0.00 33.57 4.35
2689 2779 3.316308 CCAATAAAGATAGTGCACCTGGC 59.684 47.826 14.63 0.46 45.13 4.85
2690 2780 3.316308 GCCAATAAAGATAGTGCACCTGG 59.684 47.826 14.63 7.56 0.00 4.45
2691 2781 3.316308 GGCCAATAAAGATAGTGCACCTG 59.684 47.826 14.63 0.00 0.00 4.00
2692 2782 3.053693 TGGCCAATAAAGATAGTGCACCT 60.054 43.478 14.63 0.13 0.00 4.00
2758 3559 9.303537 GTGCCTAGTAGTAGAAACTTAGATTTG 57.696 37.037 6.14 0.00 37.15 2.32
2815 3618 1.676967 GCAGGCTCCTTCACCCTTG 60.677 63.158 0.00 0.00 0.00 3.61
2817 3620 3.334054 GGCAGGCTCCTTCACCCT 61.334 66.667 0.00 0.00 0.00 4.34
2843 3647 8.655092 CACAACAAAACAAACAATCAATAGTGT 58.345 29.630 0.00 0.00 34.87 3.55
2936 3740 0.846401 CAACGCTGATCGATACCACG 59.154 55.000 0.00 2.86 41.67 4.94
2944 3748 2.120232 GACATAGGTCAACGCTGATCG 58.880 52.381 1.92 0.00 43.73 3.69
2961 3765 8.360390 CAAGAGGTATATATAACAGCAGTGACA 58.640 37.037 10.41 0.00 0.00 3.58
2994 3798 3.270877 AGATCAACTTATCCCGTGCAAC 58.729 45.455 0.00 0.00 0.00 4.17
3001 3805 7.993183 TGGATTTACAAGAGATCAACTTATCCC 59.007 37.037 18.64 10.67 32.35 3.85
3002 3806 8.831550 GTGGATTTACAAGAGATCAACTTATCC 58.168 37.037 16.63 16.63 33.20 2.59
3015 3819 7.308109 GGTTACAAATGTCGTGGATTTACAAGA 60.308 37.037 0.00 0.00 0.00 3.02
3076 3881 0.309612 CACGAAGGGGAAAAACCGTG 59.690 55.000 0.00 0.00 40.70 4.94
3078 3883 1.026584 AACACGAAGGGGAAAAACCG 58.973 50.000 0.00 0.00 40.11 4.44
3084 3889 0.688487 CCCTGTAACACGAAGGGGAA 59.312 55.000 0.00 0.00 46.05 3.97
3085 3890 2.368591 CCCTGTAACACGAAGGGGA 58.631 57.895 0.00 0.00 46.05 4.81
3093 3898 2.684374 ACGTGAAAAACCCCTGTAACAC 59.316 45.455 0.00 0.00 0.00 3.32
3099 3904 4.279922 AGGATTTAACGTGAAAAACCCCTG 59.720 41.667 16.47 0.00 0.00 4.45
3109 3914 3.404899 GGGACACAAGGATTTAACGTGA 58.595 45.455 0.00 0.00 0.00 4.35
3135 3940 4.708601 ACGATGCAAAACGAAATCAGTAC 58.291 39.130 15.81 0.00 0.00 2.73
3138 3943 4.201298 CGAAACGATGCAAAACGAAATCAG 60.201 41.667 15.81 6.09 0.00 2.90
3140 3945 3.662186 ACGAAACGATGCAAAACGAAATC 59.338 39.130 15.81 10.15 0.00 2.17
3145 3950 2.652700 GCAAACGAAACGATGCAAAACG 60.653 45.455 16.26 9.16 40.55 3.60
3151 3956 0.656205 ACACGCAAACGAAACGATGC 60.656 50.000 13.13 13.13 43.93 3.91
3161 3966 6.589830 ATGTTAGAGATATGACACGCAAAC 57.410 37.500 0.00 0.00 0.00 2.93
3243 4106 6.709397 GGGTAATTTAGTAGCCCTACATCAAC 59.291 42.308 8.06 0.00 38.48 3.18
3299 4162 9.205513 AGGGATCTAAAAAGCATGTCAAATATT 57.794 29.630 0.00 0.00 0.00 1.28
3537 4407 6.471233 TCAATACTATTCACCCAGACAGAG 57.529 41.667 0.00 0.00 0.00 3.35
3572 4442 4.302559 AGGCAGGTTACTCCCTAAAAAG 57.697 45.455 0.00 0.00 36.75 2.27
3598 4468 3.282021 CCTCACAATCCGGAACATCAAT 58.718 45.455 9.01 0.00 0.00 2.57
3623 4493 2.545742 GGCTTGTTCAGACCGCAAATTT 60.546 45.455 0.00 0.00 0.00 1.82
3750 4620 7.255942 CCATGTGAAAAATAAGGAAGGACAAGT 60.256 37.037 0.00 0.00 0.00 3.16
3768 4638 8.978874 AATAAAGTACATAGCATCCATGTGAA 57.021 30.769 0.00 0.00 37.22 3.18
3784 4654 7.121315 AGCATTGACAAGGGAGAAATAAAGTAC 59.879 37.037 1.53 0.00 0.00 2.73
3884 4779 7.608761 ACTTCAATCATTGGCAATAAAGCATTT 59.391 29.630 13.23 0.00 43.42 2.32
3924 4819 1.981256 ACGTTATATCCCCGTACGGT 58.019 50.000 31.24 16.77 36.60 4.83
3931 4826 6.110707 TGAGTTTCTCAAACGTTATATCCCC 58.889 40.000 0.00 0.00 45.88 4.81
3967 4862 7.959689 ATTCTAGAAGACATTTCATCGATGG 57.040 36.000 24.61 11.33 0.00 3.51
4005 4900 6.923199 ATTCTTCATCCCTGAAACAAACAT 57.077 33.333 0.00 0.00 40.78 2.71
4006 4901 6.729690 AATTCTTCATCCCTGAAACAAACA 57.270 33.333 0.00 0.00 40.78 2.83
4007 4902 8.437360 AAAAATTCTTCATCCCTGAAACAAAC 57.563 30.769 0.00 0.00 40.78 2.93
4111 5007 8.888579 TTTAGAAGAAGTCGAAAGAACTTCAT 57.111 30.769 15.94 6.19 43.90 2.57
4143 5039 7.819644 TGGTGTCAATTTCAGATGTAAGAATG 58.180 34.615 0.00 0.00 0.00 2.67
4230 5126 6.214412 CCTCATCAGGGGCTAAGACTTTATAT 59.786 42.308 0.00 0.00 35.89 0.86
4243 5139 0.548031 TGATTCACCTCATCAGGGGC 59.452 55.000 0.00 0.00 44.14 5.80
4358 5255 3.118811 AGCCTCTATCTTTGAGCACTCAC 60.119 47.826 0.00 0.00 39.66 3.51
4453 5350 9.875675 GATCATTAGTATGCACTTTCTTGAATC 57.124 33.333 0.00 0.00 36.14 2.52
4460 5357 9.241317 CCAATTTGATCATTAGTATGCACTTTC 57.759 33.333 0.00 0.00 36.14 2.62
4523 5420 2.911484 CTTAATCTCTGACACCTGCCC 58.089 52.381 0.00 0.00 0.00 5.36
4529 5426 2.977914 TGGCTGCTTAATCTCTGACAC 58.022 47.619 0.00 0.00 0.00 3.67
4546 5443 2.055838 GTTTTCCCGAAAAACGATGGC 58.944 47.619 4.25 0.00 45.23 4.40
4676 5586 0.037303 TCCTTACTCTGACGGACCGT 59.963 55.000 21.93 21.93 45.10 4.83
4692 5602 1.945394 GCATGACGATCAAAGCATCCT 59.055 47.619 0.00 0.00 33.49 3.24
4701 5611 1.733912 GAAGCACAAGCATGACGATCA 59.266 47.619 0.00 0.00 45.49 2.92
4759 5670 9.116080 TCTCCTAACATATCCAAATATCCACAT 57.884 33.333 0.00 0.00 0.00 3.21
4760 5671 8.504811 TCTCCTAACATATCCAAATATCCACA 57.495 34.615 0.00 0.00 0.00 4.17
4824 5737 2.159240 CGTCGGAATGAACTCTGGATGA 60.159 50.000 0.00 0.00 0.00 2.92
4856 5769 7.615582 TTCCAGTTTATGTGTGATCTCAATC 57.384 36.000 0.00 0.00 0.00 2.67
4857 5770 8.585471 ATTTCCAGTTTATGTGTGATCTCAAT 57.415 30.769 0.00 0.00 0.00 2.57
4861 5774 8.641498 AGAAATTTCCAGTTTATGTGTGATCT 57.359 30.769 14.61 0.00 0.00 2.75
4862 5775 9.994432 CTAGAAATTTCCAGTTTATGTGTGATC 57.006 33.333 14.61 0.00 0.00 2.92
4901 5846 4.262678 GGAAAGGAGGGAGTAGATATGTGC 60.263 50.000 0.00 0.00 0.00 4.57
4902 5847 5.151454 AGGAAAGGAGGGAGTAGATATGTG 58.849 45.833 0.00 0.00 0.00 3.21
4903 5848 5.426325 AGGAAAGGAGGGAGTAGATATGT 57.574 43.478 0.00 0.00 0.00 2.29
4904 5849 7.290248 TGTTTAGGAAAGGAGGGAGTAGATATG 59.710 40.741 0.00 0.00 0.00 1.78
4905 5850 7.371043 TGTTTAGGAAAGGAGGGAGTAGATAT 58.629 38.462 0.00 0.00 0.00 1.63
4906 5851 6.748969 TGTTTAGGAAAGGAGGGAGTAGATA 58.251 40.000 0.00 0.00 0.00 1.98
4907 5852 5.600749 TGTTTAGGAAAGGAGGGAGTAGAT 58.399 41.667 0.00 0.00 0.00 1.98
4908 5853 5.019657 TGTTTAGGAAAGGAGGGAGTAGA 57.980 43.478 0.00 0.00 0.00 2.59
4909 5854 5.663556 AGATGTTTAGGAAAGGAGGGAGTAG 59.336 44.000 0.00 0.00 0.00 2.57
4910 5855 5.425539 CAGATGTTTAGGAAAGGAGGGAGTA 59.574 44.000 0.00 0.00 0.00 2.59
4911 5856 4.226168 CAGATGTTTAGGAAAGGAGGGAGT 59.774 45.833 0.00 0.00 0.00 3.85
4912 5857 4.226168 ACAGATGTTTAGGAAAGGAGGGAG 59.774 45.833 0.00 0.00 0.00 4.30
4913 5858 4.175962 ACAGATGTTTAGGAAAGGAGGGA 58.824 43.478 0.00 0.00 0.00 4.20
4914 5859 4.226168 AGACAGATGTTTAGGAAAGGAGGG 59.774 45.833 0.00 0.00 0.00 4.30
4915 5860 5.428184 AGACAGATGTTTAGGAAAGGAGG 57.572 43.478 0.00 0.00 0.00 4.30
4916 5861 7.751768 AAAAGACAGATGTTTAGGAAAGGAG 57.248 36.000 0.00 0.00 0.00 3.69
4917 5862 9.635404 TTAAAAAGACAGATGTTTAGGAAAGGA 57.365 29.630 0.00 0.00 0.00 3.36
4944 5889 9.293404 CCATATGTGATAGTCCATTTGAAATCT 57.707 33.333 1.24 0.00 0.00 2.40
4945 5890 9.288576 TCCATATGTGATAGTCCATTTGAAATC 57.711 33.333 1.24 0.00 0.00 2.17
4946 5891 9.818270 ATCCATATGTGATAGTCCATTTGAAAT 57.182 29.630 1.24 0.00 0.00 2.17
4947 5892 9.070179 CATCCATATGTGATAGTCCATTTGAAA 57.930 33.333 1.24 0.00 0.00 2.69
4948 5893 8.219868 ACATCCATATGTGATAGTCCATTTGAA 58.780 33.333 1.24 0.00 44.79 2.69
4949 5894 7.748677 ACATCCATATGTGATAGTCCATTTGA 58.251 34.615 1.24 0.00 44.79 2.69
4950 5895 7.991084 ACATCCATATGTGATAGTCCATTTG 57.009 36.000 1.24 0.00 44.79 2.32
4990 5935 8.992073 GGAGCAAAATGAATGAATTTACACTTT 58.008 29.630 0.00 0.00 0.00 2.66
4991 5936 7.329226 CGGAGCAAAATGAATGAATTTACACTT 59.671 33.333 0.00 0.00 0.00 3.16
4992 5937 6.808212 CGGAGCAAAATGAATGAATTTACACT 59.192 34.615 0.00 0.00 0.00 3.55
4993 5938 6.586082 ACGGAGCAAAATGAATGAATTTACAC 59.414 34.615 0.00 0.00 0.00 2.90
4994 5939 6.686630 ACGGAGCAAAATGAATGAATTTACA 58.313 32.000 0.00 0.00 0.00 2.41
4995 5940 8.745837 CATACGGAGCAAAATGAATGAATTTAC 58.254 33.333 0.00 0.00 0.00 2.01
4996 5941 8.465999 ACATACGGAGCAAAATGAATGAATTTA 58.534 29.630 0.00 0.00 0.00 1.40
4997 5942 7.322664 ACATACGGAGCAAAATGAATGAATTT 58.677 30.769 0.00 0.00 0.00 1.82
4998 5943 6.866480 ACATACGGAGCAAAATGAATGAATT 58.134 32.000 0.00 0.00 0.00 2.17
4999 5944 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
5000 5945 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
5001 5946 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
5002 5947 6.037062 TGACTACATACGGAGCAAAATGAATG 59.963 38.462 0.00 0.00 0.00 2.67
5003 5948 6.037172 GTGACTACATACGGAGCAAAATGAAT 59.963 38.462 0.00 0.00 0.00 2.57
5004 5949 5.350365 GTGACTACATACGGAGCAAAATGAA 59.650 40.000 0.00 0.00 0.00 2.57
5005 5950 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
5006 5951 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
5007 5952 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
5008 5953 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
5009 5954 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
5010 5955 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
5011 5956 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
5012 5957 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
5013 5958 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
5014 5959 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
5015 5960 6.147164 ACATTTCAACAAGTGACTACATACGG 59.853 38.462 0.00 0.00 35.39 4.02
5016 5961 7.116376 AGACATTTCAACAAGTGACTACATACG 59.884 37.037 0.00 0.00 35.39 3.06
5017 5962 8.311650 AGACATTTCAACAAGTGACTACATAC 57.688 34.615 0.00 0.00 35.39 2.39
5018 5963 9.639601 CTAGACATTTCAACAAGTGACTACATA 57.360 33.333 0.00 0.00 35.39 2.29
5019 5964 8.367911 TCTAGACATTTCAACAAGTGACTACAT 58.632 33.333 0.00 0.00 35.39 2.29
5020 5965 7.722363 TCTAGACATTTCAACAAGTGACTACA 58.278 34.615 0.00 0.00 35.39 2.74
5021 5966 8.589335 TTCTAGACATTTCAACAAGTGACTAC 57.411 34.615 0.00 0.00 35.39 2.73
5022 5967 9.261180 CTTTCTAGACATTTCAACAAGTGACTA 57.739 33.333 0.00 0.00 35.39 2.59
5023 5968 7.987458 TCTTTCTAGACATTTCAACAAGTGACT 59.013 33.333 0.00 0.00 35.39 3.41
5024 5969 8.142994 TCTTTCTAGACATTTCAACAAGTGAC 57.857 34.615 0.00 0.00 35.39 3.67
5043 5988 9.908152 CCTCCGTTTTTAAATATTTGTCTTTCT 57.092 29.630 11.05 0.00 0.00 2.52
5044 5989 9.135843 CCCTCCGTTTTTAAATATTTGTCTTTC 57.864 33.333 11.05 0.00 0.00 2.62
5045 5990 8.862085 TCCCTCCGTTTTTAAATATTTGTCTTT 58.138 29.630 11.05 0.00 0.00 2.52
5046 5991 8.411991 TCCCTCCGTTTTTAAATATTTGTCTT 57.588 30.769 11.05 0.00 0.00 3.01
5047 5992 7.668469 ACTCCCTCCGTTTTTAAATATTTGTCT 59.332 33.333 11.05 0.00 0.00 3.41
5048 5993 7.823665 ACTCCCTCCGTTTTTAAATATTTGTC 58.176 34.615 11.05 0.00 0.00 3.18
5049 5994 7.770366 ACTCCCTCCGTTTTTAAATATTTGT 57.230 32.000 11.05 0.00 0.00 2.83
5050 5995 8.403236 CCTACTCCCTCCGTTTTTAAATATTTG 58.597 37.037 11.05 0.00 0.00 2.32
5051 5996 8.330993 TCCTACTCCCTCCGTTTTTAAATATTT 58.669 33.333 5.89 5.89 0.00 1.40
5052 5997 7.864770 TCCTACTCCCTCCGTTTTTAAATATT 58.135 34.615 0.00 0.00 0.00 1.28
5053 5998 7.441903 TCCTACTCCCTCCGTTTTTAAATAT 57.558 36.000 0.00 0.00 0.00 1.28
5054 5999 6.872585 TCCTACTCCCTCCGTTTTTAAATA 57.127 37.500 0.00 0.00 0.00 1.40
5055 6000 5.767277 TCCTACTCCCTCCGTTTTTAAAT 57.233 39.130 0.00 0.00 0.00 1.40
5056 6001 5.565455 TTCCTACTCCCTCCGTTTTTAAA 57.435 39.130 0.00 0.00 0.00 1.52
5057 6002 5.072193 AGTTTCCTACTCCCTCCGTTTTTAA 59.928 40.000 0.00 0.00 28.23 1.52
5058 6003 4.594491 AGTTTCCTACTCCCTCCGTTTTTA 59.406 41.667 0.00 0.00 28.23 1.52
5059 6004 3.393609 AGTTTCCTACTCCCTCCGTTTTT 59.606 43.478 0.00 0.00 28.23 1.94
5060 6005 2.977580 AGTTTCCTACTCCCTCCGTTTT 59.022 45.455 0.00 0.00 28.23 2.43
5061 6006 2.302157 CAGTTTCCTACTCCCTCCGTTT 59.698 50.000 0.00 0.00 33.85 3.60
5062 6007 1.900486 CAGTTTCCTACTCCCTCCGTT 59.100 52.381 0.00 0.00 33.85 4.44
5063 6008 1.558233 CAGTTTCCTACTCCCTCCGT 58.442 55.000 0.00 0.00 33.85 4.69
5064 6009 0.824759 CCAGTTTCCTACTCCCTCCG 59.175 60.000 0.00 0.00 33.85 4.63
5065 6010 0.542333 GCCAGTTTCCTACTCCCTCC 59.458 60.000 0.00 0.00 33.85 4.30
5066 6011 1.066071 GTGCCAGTTTCCTACTCCCTC 60.066 57.143 0.00 0.00 33.85 4.30
5067 6012 0.984995 GTGCCAGTTTCCTACTCCCT 59.015 55.000 0.00 0.00 33.85 4.20
5068 6013 0.984995 AGTGCCAGTTTCCTACTCCC 59.015 55.000 0.00 0.00 33.85 4.30
5069 6014 2.388310 GAGTGCCAGTTTCCTACTCC 57.612 55.000 0.00 0.00 33.85 3.85
5070 6015 1.903183 AGGAGTGCCAGTTTCCTACTC 59.097 52.381 0.00 0.00 39.51 2.59
5071 6016 2.031495 AGGAGTGCCAGTTTCCTACT 57.969 50.000 0.00 0.00 39.51 2.57
5072 6017 4.489306 AATAGGAGTGCCAGTTTCCTAC 57.511 45.455 1.84 0.00 44.12 3.18
5073 6018 5.514500 AAAATAGGAGTGCCAGTTTCCTA 57.486 39.130 2.27 2.27 45.08 2.94
5074 6019 4.388577 AAAATAGGAGTGCCAGTTTCCT 57.611 40.909 0.00 0.00 43.53 3.36
5093 6038 4.887071 ACAGTCACATGCACTCCTTAAAAA 59.113 37.500 0.00 0.00 0.00 1.94
5094 6039 4.460263 ACAGTCACATGCACTCCTTAAAA 58.540 39.130 0.00 0.00 0.00 1.52
5095 6040 4.065088 GACAGTCACATGCACTCCTTAAA 58.935 43.478 0.00 0.00 0.00 1.52
5096 6041 3.324846 AGACAGTCACATGCACTCCTTAA 59.675 43.478 2.66 0.00 0.00 1.85
5097 6042 2.899900 AGACAGTCACATGCACTCCTTA 59.100 45.455 2.66 0.00 0.00 2.69
5098 6043 1.696336 AGACAGTCACATGCACTCCTT 59.304 47.619 2.66 0.00 0.00 3.36
5110 6055 1.073444 ACTGGAGGACGTAGACAGTCA 59.927 52.381 2.66 0.00 37.86 3.41
5145 6090 1.598130 GTGTTGAAGCAGCTCCGGT 60.598 57.895 0.00 0.00 0.00 5.28
5147 6092 2.671177 CGGTGTTGAAGCAGCTCCG 61.671 63.158 9.61 9.61 42.75 4.63
5213 6160 1.606668 TGCCACGACATTTTCAACTCC 59.393 47.619 0.00 0.00 0.00 3.85
5266 6217 1.470051 AACGCCAGGTCAAAACAACT 58.530 45.000 0.00 0.00 0.00 3.16
5267 6218 2.159296 AGAAACGCCAGGTCAAAACAAC 60.159 45.455 0.00 0.00 0.00 3.32
5268 6219 2.096248 AGAAACGCCAGGTCAAAACAA 58.904 42.857 0.00 0.00 0.00 2.83
5269 6220 1.757682 AGAAACGCCAGGTCAAAACA 58.242 45.000 0.00 0.00 0.00 2.83
5270 6221 2.863401 AAGAAACGCCAGGTCAAAAC 57.137 45.000 0.00 0.00 0.00 2.43
5287 6238 4.618912 CCGTCAACTATCAGCGATCATAAG 59.381 45.833 0.00 0.00 0.00 1.73
5292 6244 1.337071 TCCCGTCAACTATCAGCGATC 59.663 52.381 0.00 0.00 0.00 3.69
5293 6245 1.399714 TCCCGTCAACTATCAGCGAT 58.600 50.000 0.00 0.00 0.00 4.58
5296 6248 2.271800 CACTTCCCGTCAACTATCAGC 58.728 52.381 0.00 0.00 0.00 4.26
5300 6252 3.861840 CATCACACTTCCCGTCAACTAT 58.138 45.455 0.00 0.00 0.00 2.12
5303 6255 0.517316 GCATCACACTTCCCGTCAAC 59.483 55.000 0.00 0.00 0.00 3.18
5326 6278 3.525609 TGGAGGGAGTATTAACATGCCAA 59.474 43.478 0.00 0.00 0.00 4.52
5327 6279 3.119319 TGGAGGGAGTATTAACATGCCA 58.881 45.455 0.00 0.00 0.00 4.92
5328 6280 3.857157 TGGAGGGAGTATTAACATGCC 57.143 47.619 0.00 0.00 0.00 4.40
5329 6281 6.715347 AAAATGGAGGGAGTATTAACATGC 57.285 37.500 0.00 0.00 0.00 4.06
5370 6322 9.221933 CCGTATGTAGTCTATAGTGAAATCTCT 57.778 37.037 0.00 0.00 0.00 3.10
5371 6323 9.217278 TCCGTATGTAGTCTATAGTGAAATCTC 57.783 37.037 0.00 0.00 0.00 2.75
5372 6324 9.221933 CTCCGTATGTAGTCTATAGTGAAATCT 57.778 37.037 0.00 0.00 0.00 2.40
5373 6325 7.964011 GCTCCGTATGTAGTCTATAGTGAAATC 59.036 40.741 0.00 0.00 0.00 2.17
5374 6326 7.447545 TGCTCCGTATGTAGTCTATAGTGAAAT 59.552 37.037 0.00 0.00 0.00 2.17
5375 6327 6.769341 TGCTCCGTATGTAGTCTATAGTGAAA 59.231 38.462 0.00 0.00 0.00 2.69
5376 6328 6.293698 TGCTCCGTATGTAGTCTATAGTGAA 58.706 40.000 0.00 0.00 0.00 3.18
5377 6329 5.861727 TGCTCCGTATGTAGTCTATAGTGA 58.138 41.667 0.00 0.00 0.00 3.41
5378 6330 6.555812 TTGCTCCGTATGTAGTCTATAGTG 57.444 41.667 0.00 0.00 0.00 2.74
5379 6331 7.578310 TTTTGCTCCGTATGTAGTCTATAGT 57.422 36.000 0.00 0.00 0.00 2.12
5380 6332 8.297426 TCATTTTGCTCCGTATGTAGTCTATAG 58.703 37.037 0.00 0.00 0.00 1.31
5381 6333 8.173542 TCATTTTGCTCCGTATGTAGTCTATA 57.826 34.615 0.00 0.00 0.00 1.31
5382 6334 7.050970 TCATTTTGCTCCGTATGTAGTCTAT 57.949 36.000 0.00 0.00 0.00 1.98
5383 6335 6.096423 ACTCATTTTGCTCCGTATGTAGTCTA 59.904 38.462 0.00 0.00 0.00 2.59
5384 6336 5.105310 ACTCATTTTGCTCCGTATGTAGTCT 60.105 40.000 0.00 0.00 0.00 3.24
5385 6337 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
5386 6338 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
5387 6339 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
5388 6340 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
5389 6341 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
5390 6342 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
5391 6343 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
5392 6344 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
5393 6345 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
5394 6346 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
5395 6347 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
5396 6348 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
5417 6369 9.261180 CGGATGTATGTTGACATATTTTAGAGT 57.739 33.333 7.07 0.00 40.18 3.24
5418 6370 9.261180 ACGGATGTATGTTGACATATTTTAGAG 57.739 33.333 7.07 0.77 40.18 2.43
5435 6387 8.689061 TCAACTACAAACTACATACGGATGTAT 58.311 33.333 20.64 8.38 45.42 2.29
5436 6388 8.054152 TCAACTACAAACTACATACGGATGTA 57.946 34.615 19.32 19.32 44.77 2.29
5438 6390 7.821595 TTCAACTACAAACTACATACGGATG 57.178 36.000 5.94 5.94 39.16 3.51
5440 6392 9.740239 GATATTCAACTACAAACTACATACGGA 57.260 33.333 0.00 0.00 0.00 4.69
5441 6393 9.745880 AGATATTCAACTACAAACTACATACGG 57.254 33.333 0.00 0.00 0.00 4.02
5464 6416 9.495382 ACAGAGGGAGTATAAGTCTTTTTAGAT 57.505 33.333 0.00 0.00 0.00 1.98
5465 6417 8.896722 ACAGAGGGAGTATAAGTCTTTTTAGA 57.103 34.615 0.00 0.00 0.00 2.10
5466 6418 9.589111 GAACAGAGGGAGTATAAGTCTTTTTAG 57.411 37.037 0.00 0.00 0.00 1.85
5467 6419 8.537858 GGAACAGAGGGAGTATAAGTCTTTTTA 58.462 37.037 0.00 0.00 0.00 1.52
5468 6420 7.237887 AGGAACAGAGGGAGTATAAGTCTTTTT 59.762 37.037 0.00 0.00 0.00 1.94
5469 6421 6.731448 AGGAACAGAGGGAGTATAAGTCTTTT 59.269 38.462 0.00 0.00 0.00 2.27
5470 6422 6.265304 AGGAACAGAGGGAGTATAAGTCTTT 58.735 40.000 0.00 0.00 0.00 2.52
5471 6423 5.844601 AGGAACAGAGGGAGTATAAGTCTT 58.155 41.667 0.00 0.00 0.00 3.01
5472 6424 5.475398 AGGAACAGAGGGAGTATAAGTCT 57.525 43.478 0.00 0.00 0.00 3.24
5473 6425 7.657023 TTTAGGAACAGAGGGAGTATAAGTC 57.343 40.000 0.00 0.00 0.00 3.01
5474 6426 9.900112 ATATTTAGGAACAGAGGGAGTATAAGT 57.100 33.333 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.