Multiple sequence alignment - TraesCS2B01G049900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2B01G049900 chr2B 100.000 4489 0 0 1 4489 24816600 24821088 0.000000e+00 8290.0
1 TraesCS2B01G049900 chr2B 91.048 3731 287 29 305 4016 24704489 24708191 0.000000e+00 4996.0
2 TraesCS2B01G049900 chr2B 79.416 1268 200 41 419 1659 24509237 24508004 0.000000e+00 839.0
3 TraesCS2B01G049900 chr2B 76.707 1421 246 54 1770 3153 24507960 24506588 0.000000e+00 712.0
4 TraesCS2B01G049900 chr2B 82.032 679 108 9 696 1372 24835930 24836596 2.340000e-157 566.0
5 TraesCS2B01G049900 chr2B 85.572 402 58 0 3150 3551 24505218 24504817 5.370000e-114 422.0
6 TraesCS2B01G049900 chr2A 90.954 3460 269 28 305 3745 15633314 15636748 0.000000e+00 4615.0
7 TraesCS2B01G049900 chr2A 90.592 287 22 4 3726 4010 15636759 15637042 4.240000e-100 375.0
8 TraesCS2B01G049900 chr2A 85.938 128 16 2 4162 4287 684607616 684607489 7.830000e-28 135.0
9 TraesCS2B01G049900 chr2D 90.191 2620 208 27 1 2606 13604538 13607122 0.000000e+00 3369.0
10 TraesCS2B01G049900 chr2D 94.236 1492 83 3 2576 4066 13607120 13608609 0.000000e+00 2276.0
11 TraesCS2B01G049900 chr2D 76.972 2028 383 60 1782 3765 13541833 13539846 0.000000e+00 1081.0
12 TraesCS2B01G049900 chr2D 81.967 1281 189 24 2513 3785 13616950 13618196 0.000000e+00 1048.0
13 TraesCS2B01G049900 chr2D 81.438 1029 156 20 419 1438 13543088 13542086 0.000000e+00 809.0
14 TraesCS2B01G049900 chr5B 71.429 994 259 23 2488 3469 31142628 31143608 5.800000e-59 239.0
15 TraesCS2B01G049900 chr5B 89.474 76 7 1 4387 4461 690538611 690538686 1.330000e-15 95.3
16 TraesCS2B01G049900 chr5B 88.312 77 8 1 4387 4462 690531267 690531343 1.720000e-14 91.6
17 TraesCS2B01G049900 chr5B 88.158 76 8 1 4387 4461 690517422 690517497 6.180000e-14 89.8
18 TraesCS2B01G049900 chr5B 88.158 76 8 1 4387 4461 690519449 690519524 6.180000e-14 89.8
19 TraesCS2B01G049900 chr5B 88.158 76 8 1 4387 4461 690521847 690521922 6.180000e-14 89.8
20 TraesCS2B01G049900 chr5B 88.158 76 8 1 4387 4461 690524240 690524315 6.180000e-14 89.8
21 TraesCS2B01G049900 chr5A 82.075 212 33 4 4081 4287 340979080 340978869 4.620000e-40 176.0
22 TraesCS2B01G049900 chr5A 70.317 977 258 30 2488 3449 700176818 700175859 7.720000e-38 169.0
23 TraesCS2B01G049900 chr5A 70.828 809 205 30 2488 3281 3616005 3615213 1.670000e-34 158.0
24 TraesCS2B01G049900 chr3B 82.381 210 29 7 4082 4287 803517371 803517576 4.620000e-40 176.0
25 TraesCS2B01G049900 chrUn 70.420 977 258 27 2488 3449 110473086 110474046 1.660000e-39 174.0
26 TraesCS2B01G049900 chrUn 88.158 76 8 1 4387 4461 417194310 417194385 6.180000e-14 89.8
27 TraesCS2B01G049900 chrUn 89.041 73 7 1 4390 4461 423389219 423389147 6.180000e-14 89.8
28 TraesCS2B01G049900 chr7B 82.297 209 27 7 4066 4271 637572827 637573028 5.970000e-39 172.0
29 TraesCS2B01G049900 chr7B 80.296 203 30 7 4072 4271 501255906 501256101 1.300000e-30 145.0
30 TraesCS2B01G049900 chr7B 79.204 226 32 13 4067 4283 690010410 690010191 4.680000e-30 143.0
31 TraesCS2B01G049900 chr4D 80.349 229 36 7 4066 4287 323149672 323149898 9.990000e-37 165.0
32 TraesCS2B01G049900 chr4D 87.705 122 12 3 4168 4287 125490278 125490158 6.060000e-29 139.0
33 TraesCS2B01G049900 chr6D 85.075 134 16 4 4155 4287 49775834 49775964 2.820000e-27 134.0
34 TraesCS2B01G049900 chr3D 92.500 80 5 1 4385 4463 83235923 83236002 3.670000e-21 113.0
35 TraesCS2B01G049900 chr4A 86.735 98 11 2 4064 4159 647596349 647596252 1.710000e-19 108.0
36 TraesCS2B01G049900 chr4A 86.735 98 11 2 4064 4159 647628177 647628080 1.710000e-19 108.0
37 TraesCS2B01G049900 chr4B 87.097 93 12 0 4067 4159 543904698 543904790 6.140000e-19 106.0
38 TraesCS2B01G049900 chr4B 91.111 45 2 2 6 50 436252384 436252426 4.850000e-05 60.2
39 TraesCS2B01G049900 chr1B 100.000 30 0 0 5 34 39812441 39812412 6.270000e-04 56.5
40 TraesCS2B01G049900 chr1B 100.000 29 0 0 6 34 216452442 216452470 2.000000e-03 54.7
41 TraesCS2B01G049900 chr1A 100.000 30 0 0 5 34 13236492 13236463 6.270000e-04 56.5
42 TraesCS2B01G049900 chr1A 100.000 30 0 0 5 34 13236705 13236676 6.270000e-04 56.5
43 TraesCS2B01G049900 chr1A 100.000 29 0 0 6 34 202101365 202101337 2.000000e-03 54.7
44 TraesCS2B01G049900 chr1D 100.000 29 0 0 6 34 148686017 148685989 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2B01G049900 chr2B 24816600 24821088 4488 False 8290.000000 8290 100.0000 1 4489 1 chr2B.!!$F2 4488
1 TraesCS2B01G049900 chr2B 24704489 24708191 3702 False 4996.000000 4996 91.0480 305 4016 1 chr2B.!!$F1 3711
2 TraesCS2B01G049900 chr2B 24504817 24509237 4420 True 657.666667 839 80.5650 419 3551 3 chr2B.!!$R1 3132
3 TraesCS2B01G049900 chr2B 24835930 24836596 666 False 566.000000 566 82.0320 696 1372 1 chr2B.!!$F3 676
4 TraesCS2B01G049900 chr2A 15633314 15637042 3728 False 2495.000000 4615 90.7730 305 4010 2 chr2A.!!$F1 3705
5 TraesCS2B01G049900 chr2D 13604538 13608609 4071 False 2822.500000 3369 92.2135 1 4066 2 chr2D.!!$F2 4065
6 TraesCS2B01G049900 chr2D 13616950 13618196 1246 False 1048.000000 1048 81.9670 2513 3785 1 chr2D.!!$F1 1272
7 TraesCS2B01G049900 chr2D 13539846 13543088 3242 True 945.000000 1081 79.2050 419 3765 2 chr2D.!!$R1 3346
8 TraesCS2B01G049900 chr5B 31142628 31143608 980 False 239.000000 239 71.4290 2488 3469 1 chr5B.!!$F1 981

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
401 403 0.037697 GGCGACCACATATATGGCGA 60.038 55.000 17.34 0.0 44.33 5.54 F
875 880 1.674651 GTCCGAGGTTTCCCAAGGC 60.675 63.158 0.00 0.0 31.73 4.35 F
2661 2774 1.222567 AGAAGGGGTGAACTTGGTGT 58.777 50.000 0.00 0.0 0.00 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2394 2479 1.411246 TGCACCACGAGTTTGTCTACT 59.589 47.619 0.0 0.0 0.0 2.57 R
2772 2885 0.247736 AGCACATCTTCCTCGACACC 59.752 55.000 0.0 0.0 0.0 4.16 R
4076 5622 0.035176 CATGGCCCTGGTTTTGTTGG 59.965 55.000 0.0 0.0 0.0 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.681593 AGCAGAGTCATCATATGCTCC 57.318 47.619 0.00 0.00 43.46 4.70
39 40 2.970640 AGCAGAGTCATCATATGCTCCA 59.029 45.455 0.00 0.00 43.46 3.86
70 71 7.955185 TCCATAATAATTGCCAATATGGAGGTT 59.045 33.333 13.29 0.00 44.26 3.50
83 84 2.062636 TGGAGGTTAGGGAGCAAAAGT 58.937 47.619 0.00 0.00 0.00 2.66
117 118 4.285517 AGAGTCTCCATATGGGTTGCTATG 59.714 45.833 21.78 2.97 38.11 2.23
118 119 3.976654 AGTCTCCATATGGGTTGCTATGT 59.023 43.478 21.78 0.00 38.11 2.29
124 125 1.696063 ATGGGTTGCTATGTCCATGC 58.304 50.000 0.00 0.00 38.45 4.06
130 131 5.009631 GGGTTGCTATGTCCATGCATTATA 58.990 41.667 0.00 0.00 36.55 0.98
133 134 6.600822 GGTTGCTATGTCCATGCATTATAGAT 59.399 38.462 15.75 5.02 36.55 1.98
134 135 7.201679 GGTTGCTATGTCCATGCATTATAGATC 60.202 40.741 15.75 0.00 36.55 2.75
149 150 8.851145 GCATTATAGATCGTCCTCCATATCTAA 58.149 37.037 0.00 0.00 35.26 2.10
158 159 5.390387 GTCCTCCATATCTAACCTCTCAGT 58.610 45.833 0.00 0.00 0.00 3.41
169 170 6.853720 TCTAACCTCTCAGTCTTCGTATTTG 58.146 40.000 0.00 0.00 0.00 2.32
170 171 3.851098 ACCTCTCAGTCTTCGTATTTGC 58.149 45.455 0.00 0.00 0.00 3.68
185 186 1.774110 TTTGCTGTCTTGAGGCCAAA 58.226 45.000 5.01 0.00 0.00 3.28
232 233 0.308376 TTGTTTGGCGCGTAGGAAAC 59.692 50.000 8.43 11.99 0.00 2.78
266 268 0.615331 TCCTCACATGGAGCTGGAAC 59.385 55.000 0.00 0.00 42.62 3.62
269 271 1.191489 TCACATGGAGCTGGAACGGA 61.191 55.000 0.00 0.00 36.31 4.69
270 272 0.742281 CACATGGAGCTGGAACGGAG 60.742 60.000 0.00 0.00 36.31 4.63
275 277 0.462759 GGAGCTGGAACGGAGATTGG 60.463 60.000 0.00 0.00 36.31 3.16
279 281 1.229690 TGGAACGGAGATTGGGGGA 60.230 57.895 0.00 0.00 0.00 4.81
283 285 2.521126 GAACGGAGATTGGGGGAAAAA 58.479 47.619 0.00 0.00 0.00 1.94
287 289 3.526019 ACGGAGATTGGGGGAAAAAGATA 59.474 43.478 0.00 0.00 0.00 1.98
290 292 5.456763 CGGAGATTGGGGGAAAAAGATATCT 60.457 44.000 0.00 0.00 0.00 1.98
331 333 3.726557 ATTTTGGAGGCTGAGACATGA 57.273 42.857 0.00 0.00 0.00 3.07
339 341 1.137872 GGCTGAGACATGACGATCCTT 59.862 52.381 0.00 0.00 0.00 3.36
367 369 0.885596 CGTCGCCTAGGTAGCTAGCT 60.886 60.000 27.23 27.23 37.80 3.32
384 386 3.464111 AGCTTCCATATGCATTTTGGC 57.536 42.857 18.85 10.72 0.00 4.52
400 402 0.320334 TGGCGACCACATATATGGCG 60.320 55.000 16.96 14.21 44.33 5.69
401 403 0.037697 GGCGACCACATATATGGCGA 60.038 55.000 17.34 0.00 44.33 5.54
559 564 1.750193 ACGGACAATAGCAACATGGG 58.250 50.000 0.00 0.00 0.00 4.00
610 615 7.187824 TCCTAGCTATTTTTCTCATCACTGT 57.812 36.000 0.00 0.00 0.00 3.55
660 665 3.261897 AGTTAACTCTGATCCAGGGTGTG 59.738 47.826 1.12 0.00 45.36 3.82
661 666 1.734655 AACTCTGATCCAGGGTGTGT 58.265 50.000 0.00 0.00 45.36 3.72
730 735 5.840149 TCTTACCTACCTTGTGTACAAAGGA 59.160 40.000 28.55 17.65 35.79 3.36
854 859 5.505780 TCTGGTCTTTTCTTTCAAGGTTCA 58.494 37.500 0.00 0.00 0.00 3.18
875 880 1.674651 GTCCGAGGTTTCCCAAGGC 60.675 63.158 0.00 0.00 31.73 4.35
926 931 1.896465 GGCCTAGAGAACGGATATGCT 59.104 52.381 0.00 0.00 0.00 3.79
950 955 5.929415 TGTAGATTACAACACTCGAATGCAA 59.071 36.000 0.00 0.00 35.38 4.08
955 960 2.802816 ACAACACTCGAATGCAAGAGAC 59.197 45.455 19.60 0.00 37.87 3.36
975 980 1.728971 CTCGCTTCTTCATTGACGCTT 59.271 47.619 0.00 0.00 0.00 4.68
1075 1080 7.172361 GTGCCTCCTCACATTATTAGATTTCTC 59.828 40.741 0.00 0.00 36.97 2.87
1108 1113 6.908870 TGCAACTAATTCATGCAGTACTAG 57.091 37.500 8.22 0.00 44.52 2.57
1220 1226 5.201910 CGATTTCGTTTTTGTTGCACTCTA 58.798 37.500 0.00 0.00 34.11 2.43
1273 1288 7.772332 ATATAATCAACGAAGTCAGGTTGTC 57.228 36.000 0.00 0.00 45.00 3.18
1327 1344 8.531982 AGTTTGCTACTTCATGTTACTCTATCA 58.468 33.333 0.00 0.00 31.29 2.15
1366 1383 7.611770 TGATGCTTCTTACTTTGCTAAGTCTA 58.388 34.615 16.89 6.26 43.45 2.59
1372 1389 9.145865 CTTCTTACTTTGCTAAGTCTAAAGAGG 57.854 37.037 16.89 15.56 43.45 3.69
1400 1417 7.480760 AATTTGAGCCCTAATGTTATTGTGT 57.519 32.000 0.00 0.00 0.00 3.72
1404 1421 8.671384 TTGAGCCCTAATGTTATTGTGTATAC 57.329 34.615 0.00 0.00 0.00 1.47
1467 1485 8.641499 TTTTTATTGCAAATTCGTCTTCAGTT 57.359 26.923 1.71 0.00 0.00 3.16
1578 1606 7.989826 AGTAAGCAATCAATGTATTCTGGAAC 58.010 34.615 0.00 0.00 0.00 3.62
1645 1679 7.880713 TCTGCACAATTTAAAGTACTCCATACA 59.119 33.333 0.00 0.00 36.09 2.29
1663 1697 7.697946 TCCATACATGCCATAGATAAATCCAA 58.302 34.615 0.00 0.00 0.00 3.53
1669 1703 8.528643 ACATGCCATAGATAAATCCAATTGATG 58.471 33.333 7.12 0.00 32.68 3.07
1713 1749 5.403897 TTTACTCTGACGAAAAAGTGCTG 57.596 39.130 0.00 0.00 0.00 4.41
2040 2083 8.977412 AGGGTTTAGAATTTTGGTACCAATATG 58.023 33.333 27.57 0.00 35.70 1.78
2041 2084 8.755028 GGGTTTAGAATTTTGGTACCAATATGT 58.245 33.333 27.57 19.31 35.70 2.29
2187 2250 6.998802 ACCCATGAAATTACCGAAATTTTGA 58.001 32.000 7.02 0.00 45.70 2.69
2202 2265 9.500864 CCGAAATTTTGAAAACATTGTTGAAAT 57.499 25.926 7.02 5.48 0.00 2.17
2295 2380 7.548967 ACAAAAGAAATTGGTTTCCTTCGTAA 58.451 30.769 0.00 0.00 43.82 3.18
2334 2419 4.441792 TCATTAGCATGTACACGATTGCT 58.558 39.130 21.71 21.71 46.51 3.91
2338 2423 2.416547 AGCATGTACACGATTGCTCAAC 59.583 45.455 14.48 0.00 41.38 3.18
2359 2444 2.545526 CACGCTCATTATACCAGCCTTG 59.454 50.000 0.00 0.00 0.00 3.61
2376 2461 3.378427 GCCTTGCCTAGAAAGTTATGGTG 59.622 47.826 0.00 0.00 0.00 4.17
2392 2477 8.193250 AGTTATGGTGTTTCACGATGTTATAC 57.807 34.615 7.45 0.00 34.00 1.47
2394 2479 4.807443 TGGTGTTTCACGATGTTATACGA 58.193 39.130 0.00 0.00 34.83 3.43
2421 2506 3.003275 ACAAACTCGTGGTGCATGTTAAG 59.997 43.478 0.00 0.00 0.00 1.85
2433 2518 9.214957 GTGGTGCATGTTAAGTTGCTATATATA 57.785 33.333 10.09 0.00 39.60 0.86
2434 2519 9.958180 TGGTGCATGTTAAGTTGCTATATATAT 57.042 29.630 10.09 0.00 39.60 0.86
2472 2558 3.603857 GCCGACGTTGTGATAATGTATGC 60.604 47.826 1.30 0.00 0.00 3.14
2509 2595 2.233676 GGACTACTTTGCAAAATGGGGG 59.766 50.000 13.84 2.79 0.00 5.40
2528 2614 1.682740 GAGAAGAGGGGGTAGTCGAG 58.317 60.000 0.00 0.00 0.00 4.04
2609 2722 8.616942 GGAAATGAGGTTAGAGAAAAGCTATTC 58.383 37.037 0.00 0.00 37.32 1.75
2624 2737 4.360563 AGCTATTCGGTGAGATTTACACG 58.639 43.478 0.00 0.00 38.90 4.49
2661 2774 1.222567 AGAAGGGGTGAACTTGGTGT 58.777 50.000 0.00 0.00 0.00 4.16
2772 2885 1.126846 GGTCAAGAAAGACATGCGACG 59.873 52.381 0.00 0.00 40.29 5.12
2941 3054 3.891366 GCTTGCCTATTGACCCATACAAT 59.109 43.478 0.00 0.00 40.40 2.71
3133 3252 1.202927 TGTGAGGGCAAAAGAGGGAAG 60.203 52.381 0.00 0.00 0.00 3.46
3224 4716 4.612264 TTACAAGGACCCTGAAGTGTAC 57.388 45.455 0.00 0.00 0.00 2.90
3381 4875 6.303021 GCCATTTGCTGAGAAATTTTGAAA 57.697 33.333 0.00 0.00 36.87 2.69
3463 4957 5.990668 AGGGAAAGTGCTGGTAAACTATAG 58.009 41.667 0.00 0.00 0.00 1.31
3510 5008 7.505248 ACTGAGATATGCTATATGTCCATCGAT 59.495 37.037 0.00 0.00 0.00 3.59
3555 5070 6.094742 CCTTTGCATGTGTGTGGTAATACATA 59.905 38.462 0.00 0.00 32.86 2.29
3560 5075 7.337942 TGCATGTGTGTGGTAATACATATTTGA 59.662 33.333 0.00 0.00 28.81 2.69
3567 5082 9.878599 GTGTGGTAATACATATTTGATAGTTGC 57.121 33.333 0.00 0.00 32.43 4.17
3592 5107 2.311542 TGGTTTCTGGGGCATCATAAGT 59.688 45.455 0.00 0.00 0.00 2.24
3603 5118 5.507985 GGGGCATCATAAGTTCAAGTTATGC 60.508 44.000 17.21 10.38 39.92 3.14
3622 5137 9.769093 AGTTATGCGTAACTTGATTGTTTAATC 57.231 29.630 22.92 0.00 46.40 1.75
3644 5159 8.641498 AATCACTTCTACTTCATTGTCCAAAT 57.359 30.769 0.00 0.00 0.00 2.32
3727 5242 4.787260 TGTTTATCTACACGCTACACCA 57.213 40.909 0.00 0.00 0.00 4.17
3735 5279 2.968675 ACACGCTACACCAGGTTTATC 58.031 47.619 0.00 0.00 0.00 1.75
3977 5523 1.742761 ATCACCTCCGCTTTGACATG 58.257 50.000 0.00 0.00 0.00 3.21
4016 5562 1.900486 CCAGTCCTTACTCTTTCCGGT 59.100 52.381 0.00 0.00 31.97 5.28
4024 5570 0.535102 ACTCTTTCCGGTTGCCACAG 60.535 55.000 0.00 0.00 0.00 3.66
4035 5581 1.708993 TTGCCACAGAAGCCCTCACT 61.709 55.000 0.00 0.00 0.00 3.41
4041 5587 1.701847 ACAGAAGCCCTCACTGATGTT 59.298 47.619 0.00 0.00 35.85 2.71
4056 5602 0.976641 ATGTTTCCTGCTCGACTCCA 59.023 50.000 0.00 0.00 0.00 3.86
4059 5605 1.471829 TTTCCTGCTCGACTCCAGCA 61.472 55.000 0.00 0.00 44.80 4.41
4066 5612 2.743928 CGACTCCAGCAGGTTGCC 60.744 66.667 0.00 0.00 46.52 4.52
4067 5613 2.431683 GACTCCAGCAGGTTGCCA 59.568 61.111 0.00 0.00 46.52 4.92
4068 5614 1.673665 GACTCCAGCAGGTTGCCAG 60.674 63.158 0.00 0.00 46.52 4.85
4069 5615 2.116983 GACTCCAGCAGGTTGCCAGA 62.117 60.000 0.00 0.00 46.52 3.86
4070 5616 1.376942 CTCCAGCAGGTTGCCAGAG 60.377 63.158 0.00 0.99 46.52 3.35
4071 5617 3.060615 CCAGCAGGTTGCCAGAGC 61.061 66.667 0.00 0.00 46.52 4.09
4072 5618 3.060615 CAGCAGGTTGCCAGAGCC 61.061 66.667 0.00 0.00 46.52 4.70
4073 5619 4.711949 AGCAGGTTGCCAGAGCCG 62.712 66.667 0.00 0.00 46.52 5.52
4082 5628 4.659172 CCAGAGCCGGGCCAACAA 62.659 66.667 17.02 0.00 0.00 2.83
4083 5629 2.597217 CAGAGCCGGGCCAACAAA 60.597 61.111 17.02 0.00 0.00 2.83
4084 5630 2.197324 AGAGCCGGGCCAACAAAA 59.803 55.556 17.02 0.00 0.00 2.44
4085 5631 2.200337 AGAGCCGGGCCAACAAAAC 61.200 57.895 17.02 0.00 0.00 2.43
4086 5632 3.220999 GAGCCGGGCCAACAAAACC 62.221 63.158 17.02 0.00 0.00 3.27
4087 5633 3.541713 GCCGGGCCAACAAAACCA 61.542 61.111 8.12 0.00 0.00 3.67
4088 5634 2.733945 CCGGGCCAACAAAACCAG 59.266 61.111 4.39 0.00 0.00 4.00
4089 5635 2.733945 CGGGCCAACAAAACCAGG 59.266 61.111 4.39 0.00 0.00 4.45
4090 5636 2.866726 CGGGCCAACAAAACCAGGG 61.867 63.158 4.39 0.00 0.00 4.45
4091 5637 2.425592 GGCCAACAAAACCAGGGC 59.574 61.111 0.00 0.00 43.86 5.19
4092 5638 2.425592 GCCAACAAAACCAGGGCC 59.574 61.111 0.00 0.00 38.70 5.80
4093 5639 2.439104 GCCAACAAAACCAGGGCCA 61.439 57.895 6.18 0.00 38.70 5.36
4094 5640 1.767654 GCCAACAAAACCAGGGCCAT 61.768 55.000 6.18 0.00 38.70 4.40
4095 5641 0.035176 CCAACAAAACCAGGGCCATG 59.965 55.000 11.33 11.33 0.00 3.66
4096 5642 0.758123 CAACAAAACCAGGGCCATGT 59.242 50.000 17.55 1.30 0.00 3.21
4097 5643 0.758123 AACAAAACCAGGGCCATGTG 59.242 50.000 17.55 10.43 0.00 3.21
4098 5644 1.004679 CAAAACCAGGGCCATGTGC 60.005 57.895 17.55 0.00 40.16 4.57
4099 5645 2.573083 AAAACCAGGGCCATGTGCG 61.573 57.895 17.55 3.39 42.61 5.34
4100 5646 2.992817 AAAACCAGGGCCATGTGCGA 62.993 55.000 17.55 0.00 42.61 5.10
4101 5647 2.992817 AAACCAGGGCCATGTGCGAA 62.993 55.000 17.55 0.00 42.61 4.70
4102 5648 2.676121 CCAGGGCCATGTGCGAAA 60.676 61.111 17.55 0.00 42.61 3.46
4103 5649 2.568090 CAGGGCCATGTGCGAAAC 59.432 61.111 9.85 0.00 42.61 2.78
4104 5650 1.973281 CAGGGCCATGTGCGAAACT 60.973 57.895 9.85 0.00 42.61 2.66
4105 5651 0.676466 CAGGGCCATGTGCGAAACTA 60.676 55.000 9.85 0.00 42.61 2.24
4106 5652 0.037590 AGGGCCATGTGCGAAACTAA 59.962 50.000 6.18 0.00 42.61 2.24
4107 5653 0.885196 GGGCCATGTGCGAAACTAAA 59.115 50.000 4.39 0.00 42.61 1.85
4108 5654 1.271102 GGGCCATGTGCGAAACTAAAA 59.729 47.619 4.39 0.00 42.61 1.52
4109 5655 2.288518 GGGCCATGTGCGAAACTAAAAA 60.289 45.455 4.39 0.00 42.61 1.94
4127 5673 4.870021 AAAAATGGGGCTCTATCTCACT 57.130 40.909 0.00 0.00 0.00 3.41
4128 5674 5.975988 AAAAATGGGGCTCTATCTCACTA 57.024 39.130 0.00 0.00 0.00 2.74
4129 5675 5.975988 AAAATGGGGCTCTATCTCACTAA 57.024 39.130 0.00 0.00 0.00 2.24
4130 5676 5.975988 AAATGGGGCTCTATCTCACTAAA 57.024 39.130 0.00 0.00 0.00 1.85
4131 5677 5.975988 AATGGGGCTCTATCTCACTAAAA 57.024 39.130 0.00 0.00 0.00 1.52
4132 5678 5.975988 ATGGGGCTCTATCTCACTAAAAA 57.024 39.130 0.00 0.00 0.00 1.94
4166 5712 8.327941 ACAAGCAACTATTATGTAGCATATGG 57.672 34.615 4.56 0.00 0.00 2.74
4167 5713 7.939039 ACAAGCAACTATTATGTAGCATATGGT 59.061 33.333 12.78 12.78 0.00 3.55
4168 5714 9.435688 CAAGCAACTATTATGTAGCATATGGTA 57.564 33.333 10.55 10.55 0.00 3.25
4170 5716 9.605275 AGCAACTATTATGTAGCATATGGTATG 57.395 33.333 17.12 9.35 0.00 2.39
4171 5717 9.599866 GCAACTATTATGTAGCATATGGTATGA 57.400 33.333 17.12 8.22 0.00 2.15
4176 5722 8.877808 ATTATGTAGCATATGGTATGATGTCG 57.122 34.615 17.12 0.00 0.00 4.35
4177 5723 5.722021 TGTAGCATATGGTATGATGTCGT 57.278 39.130 17.12 0.00 0.00 4.34
4178 5724 6.827586 TGTAGCATATGGTATGATGTCGTA 57.172 37.500 17.12 0.00 0.00 3.43
4179 5725 6.617879 TGTAGCATATGGTATGATGTCGTAC 58.382 40.000 17.12 4.34 37.56 3.67
4180 5726 5.722021 AGCATATGGTATGATGTCGTACA 57.278 39.130 5.40 2.29 39.48 2.90
4181 5727 6.286240 AGCATATGGTATGATGTCGTACAT 57.714 37.500 5.40 0.91 42.43 2.29
4182 5728 6.101997 AGCATATGGTATGATGTCGTACATG 58.898 40.000 5.40 9.50 39.27 3.21
4183 5729 6.071391 AGCATATGGTATGATGTCGTACATGA 60.071 38.462 5.40 0.00 39.27 3.07
4184 5730 6.035005 GCATATGGTATGATGTCGTACATGAC 59.965 42.308 12.89 0.00 39.27 3.06
4190 5736 3.812577 TGTCGTACATGACAGCTGG 57.187 52.632 19.93 1.96 43.62 4.85
4191 5737 1.253100 TGTCGTACATGACAGCTGGA 58.747 50.000 19.93 4.16 43.62 3.86
4192 5738 1.824852 TGTCGTACATGACAGCTGGAT 59.175 47.619 19.93 6.67 43.62 3.41
4193 5739 3.020984 TGTCGTACATGACAGCTGGATA 58.979 45.455 19.93 3.81 43.62 2.59
4194 5740 3.636764 TGTCGTACATGACAGCTGGATAT 59.363 43.478 19.93 6.23 43.62 1.63
4195 5741 4.825085 TGTCGTACATGACAGCTGGATATA 59.175 41.667 19.93 0.00 43.62 0.86
4196 5742 5.476945 TGTCGTACATGACAGCTGGATATAT 59.523 40.000 19.93 0.85 43.62 0.86
4197 5743 6.657541 TGTCGTACATGACAGCTGGATATATA 59.342 38.462 19.93 0.00 43.62 0.86
4198 5744 7.175990 TGTCGTACATGACAGCTGGATATATAA 59.824 37.037 19.93 0.00 43.62 0.98
4199 5745 8.027189 GTCGTACATGACAGCTGGATATATAAA 58.973 37.037 19.93 0.00 38.75 1.40
4200 5746 8.581578 TCGTACATGACAGCTGGATATATAAAA 58.418 33.333 19.93 0.00 0.00 1.52
4201 5747 8.648097 CGTACATGACAGCTGGATATATAAAAC 58.352 37.037 19.93 2.81 0.00 2.43
4202 5748 9.712305 GTACATGACAGCTGGATATATAAAACT 57.288 33.333 19.93 0.00 0.00 2.66
4203 5749 8.839310 ACATGACAGCTGGATATATAAAACTC 57.161 34.615 19.93 1.80 0.00 3.01
4204 5750 8.432013 ACATGACAGCTGGATATATAAAACTCA 58.568 33.333 19.93 7.95 0.00 3.41
4205 5751 9.445878 CATGACAGCTGGATATATAAAACTCAT 57.554 33.333 19.93 9.97 0.00 2.90
4207 5753 9.929180 TGACAGCTGGATATATAAAACTCATAC 57.071 33.333 19.93 0.00 0.00 2.39
4208 5754 9.372369 GACAGCTGGATATATAAAACTCATACC 57.628 37.037 19.93 0.00 0.00 2.73
4209 5755 9.105844 ACAGCTGGATATATAAAACTCATACCT 57.894 33.333 19.93 0.00 0.00 3.08
4221 5767 4.939052 ACTCATACCTATTCAACTCCCG 57.061 45.455 0.00 0.00 0.00 5.14
4222 5768 3.641906 ACTCATACCTATTCAACTCCCGG 59.358 47.826 0.00 0.00 0.00 5.73
4223 5769 3.641906 CTCATACCTATTCAACTCCCGGT 59.358 47.826 0.00 0.00 0.00 5.28
4224 5770 4.035112 TCATACCTATTCAACTCCCGGTT 58.965 43.478 0.00 0.00 38.93 4.44
4239 5785 7.562454 ACTCCCGGTTGTATAATGTTTATTG 57.438 36.000 0.00 0.00 0.00 1.90
4240 5786 7.340256 ACTCCCGGTTGTATAATGTTTATTGA 58.660 34.615 0.00 0.00 0.00 2.57
4241 5787 7.830201 ACTCCCGGTTGTATAATGTTTATTGAA 59.170 33.333 0.00 0.00 0.00 2.69
4242 5788 7.987649 TCCCGGTTGTATAATGTTTATTGAAC 58.012 34.615 0.00 0.00 38.78 3.18
4289 5835 8.761575 TTTGAAACTAAATCTTCAATGATGGC 57.238 30.769 0.00 0.00 40.31 4.40
4290 5836 7.465353 TGAAACTAAATCTTCAATGATGGCA 57.535 32.000 0.00 0.00 0.00 4.92
4291 5837 7.894708 TGAAACTAAATCTTCAATGATGGCAA 58.105 30.769 0.00 0.00 0.00 4.52
4292 5838 7.814107 TGAAACTAAATCTTCAATGATGGCAAC 59.186 33.333 0.00 0.00 0.00 4.17
4293 5839 5.883661 ACTAAATCTTCAATGATGGCAACG 58.116 37.500 0.00 0.00 42.51 4.10
4294 5840 4.789012 AAATCTTCAATGATGGCAACGT 57.211 36.364 0.00 0.00 42.51 3.99
4295 5841 3.770263 ATCTTCAATGATGGCAACGTG 57.230 42.857 0.00 0.00 42.51 4.49
4296 5842 1.811965 TCTTCAATGATGGCAACGTGG 59.188 47.619 0.00 0.00 42.51 4.94
4297 5843 1.541147 CTTCAATGATGGCAACGTGGT 59.459 47.619 0.00 0.00 42.51 4.16
4298 5844 0.880441 TCAATGATGGCAACGTGGTG 59.120 50.000 0.00 0.00 42.51 4.17
4299 5845 0.109179 CAATGATGGCAACGTGGTGG 60.109 55.000 0.00 0.00 42.51 4.61
4300 5846 1.250154 AATGATGGCAACGTGGTGGG 61.250 55.000 0.00 0.00 42.51 4.61
4301 5847 3.061848 GATGGCAACGTGGTGGGG 61.062 66.667 0.00 0.00 42.51 4.96
4305 5851 4.054825 GCAACGTGGTGGGGCATG 62.055 66.667 0.00 0.00 0.00 4.06
4306 5852 2.597217 CAACGTGGTGGGGCATGT 60.597 61.111 0.00 0.00 0.00 3.21
4307 5853 2.597217 AACGTGGTGGGGCATGTG 60.597 61.111 0.00 0.00 0.00 3.21
4308 5854 4.659172 ACGTGGTGGGGCATGTGG 62.659 66.667 0.00 0.00 0.00 4.17
4309 5855 4.659172 CGTGGTGGGGCATGTGGT 62.659 66.667 0.00 0.00 0.00 4.16
4310 5856 2.676471 GTGGTGGGGCATGTGGTC 60.676 66.667 0.00 0.00 0.00 4.02
4311 5857 3.181530 TGGTGGGGCATGTGGTCA 61.182 61.111 0.00 0.00 0.00 4.02
4312 5858 2.676471 GGTGGGGCATGTGGTCAC 60.676 66.667 0.00 0.00 0.00 3.67
4313 5859 3.055719 GTGGGGCATGTGGTCACG 61.056 66.667 0.00 0.00 0.00 4.35
4314 5860 3.245346 TGGGGCATGTGGTCACGA 61.245 61.111 0.00 0.00 0.00 4.35
4315 5861 2.272146 GGGGCATGTGGTCACGAT 59.728 61.111 0.00 0.00 0.00 3.73
4316 5862 1.268283 TGGGGCATGTGGTCACGATA 61.268 55.000 0.00 0.00 0.00 2.92
4317 5863 0.532862 GGGGCATGTGGTCACGATAG 60.533 60.000 0.00 0.00 46.19 2.08
4318 5864 1.160329 GGGCATGTGGTCACGATAGC 61.160 60.000 0.00 0.00 42.67 2.97
4319 5865 0.179073 GGCATGTGGTCACGATAGCT 60.179 55.000 0.00 0.00 42.67 3.32
4320 5866 1.212616 GCATGTGGTCACGATAGCTC 58.787 55.000 0.00 0.00 42.67 4.09
4321 5867 1.471501 GCATGTGGTCACGATAGCTCA 60.472 52.381 0.00 0.00 42.67 4.26
4322 5868 2.804572 GCATGTGGTCACGATAGCTCAT 60.805 50.000 0.00 0.00 42.67 2.90
4323 5869 2.584492 TGTGGTCACGATAGCTCATG 57.416 50.000 0.00 0.00 42.67 3.07
4324 5870 1.824852 TGTGGTCACGATAGCTCATGT 59.175 47.619 0.00 0.00 42.67 3.21
4325 5871 2.196749 GTGGTCACGATAGCTCATGTG 58.803 52.381 0.00 0.00 42.67 3.21
4326 5872 1.136891 TGGTCACGATAGCTCATGTGG 59.863 52.381 10.97 0.00 42.67 4.17
4327 5873 1.212616 GTCACGATAGCTCATGTGGC 58.787 55.000 10.97 6.63 42.67 5.01
4328 5874 0.249031 TCACGATAGCTCATGTGGCG 60.249 55.000 10.97 0.00 42.67 5.69
4329 5875 0.249031 CACGATAGCTCATGTGGCGA 60.249 55.000 0.00 0.00 42.67 5.54
4330 5876 0.459899 ACGATAGCTCATGTGGCGAA 59.540 50.000 0.00 0.00 42.67 4.70
4331 5877 1.069204 ACGATAGCTCATGTGGCGAAT 59.931 47.619 0.00 0.00 42.67 3.34
4332 5878 1.723542 CGATAGCTCATGTGGCGAATC 59.276 52.381 0.00 14.68 34.52 2.52
4333 5879 2.072298 GATAGCTCATGTGGCGAATCC 58.928 52.381 0.00 0.00 34.52 3.01
4334 5880 0.106708 TAGCTCATGTGGCGAATCCC 59.893 55.000 0.00 0.00 34.52 3.85
4335 5881 1.153086 GCTCATGTGGCGAATCCCT 60.153 57.895 0.00 0.00 0.00 4.20
4336 5882 0.749454 GCTCATGTGGCGAATCCCTT 60.749 55.000 0.00 0.00 0.00 3.95
4337 5883 1.755179 CTCATGTGGCGAATCCCTTT 58.245 50.000 0.00 0.00 0.00 3.11
4338 5884 1.402968 CTCATGTGGCGAATCCCTTTG 59.597 52.381 0.00 0.00 0.00 2.77
4339 5885 1.004161 TCATGTGGCGAATCCCTTTGA 59.996 47.619 0.00 0.00 0.00 2.69
4340 5886 1.818060 CATGTGGCGAATCCCTTTGAA 59.182 47.619 0.00 0.00 0.00 2.69
4341 5887 1.243902 TGTGGCGAATCCCTTTGAAC 58.756 50.000 0.00 0.00 0.00 3.18
4342 5888 1.202879 TGTGGCGAATCCCTTTGAACT 60.203 47.619 0.00 0.00 0.00 3.01
4343 5889 1.468914 GTGGCGAATCCCTTTGAACTC 59.531 52.381 0.00 0.00 0.00 3.01
4344 5890 1.351017 TGGCGAATCCCTTTGAACTCT 59.649 47.619 0.00 0.00 0.00 3.24
4345 5891 2.224769 TGGCGAATCCCTTTGAACTCTT 60.225 45.455 0.00 0.00 0.00 2.85
4346 5892 3.008594 TGGCGAATCCCTTTGAACTCTTA 59.991 43.478 0.00 0.00 0.00 2.10
4347 5893 4.200092 GGCGAATCCCTTTGAACTCTTAT 58.800 43.478 0.00 0.00 0.00 1.73
4348 5894 4.035675 GGCGAATCCCTTTGAACTCTTATG 59.964 45.833 0.00 0.00 0.00 1.90
4349 5895 4.496507 GCGAATCCCTTTGAACTCTTATGC 60.497 45.833 0.00 0.00 0.00 3.14
4350 5896 4.878397 CGAATCCCTTTGAACTCTTATGCT 59.122 41.667 0.00 0.00 0.00 3.79
4351 5897 5.220739 CGAATCCCTTTGAACTCTTATGCTG 60.221 44.000 0.00 0.00 0.00 4.41
4352 5898 4.640771 TCCCTTTGAACTCTTATGCTGT 57.359 40.909 0.00 0.00 0.00 4.40
4353 5899 4.326826 TCCCTTTGAACTCTTATGCTGTG 58.673 43.478 0.00 0.00 0.00 3.66
4354 5900 4.041567 TCCCTTTGAACTCTTATGCTGTGA 59.958 41.667 0.00 0.00 0.00 3.58
4355 5901 4.946157 CCCTTTGAACTCTTATGCTGTGAT 59.054 41.667 0.00 0.00 0.00 3.06
4356 5902 5.065731 CCCTTTGAACTCTTATGCTGTGATC 59.934 44.000 0.00 0.00 0.00 2.92
4357 5903 5.879223 CCTTTGAACTCTTATGCTGTGATCT 59.121 40.000 0.00 0.00 0.00 2.75
4358 5904 6.373774 CCTTTGAACTCTTATGCTGTGATCTT 59.626 38.462 0.00 0.00 0.00 2.40
4359 5905 7.094463 CCTTTGAACTCTTATGCTGTGATCTTT 60.094 37.037 0.00 0.00 0.00 2.52
4360 5906 8.846943 TTTGAACTCTTATGCTGTGATCTTTA 57.153 30.769 0.00 0.00 0.00 1.85
4361 5907 8.846943 TTGAACTCTTATGCTGTGATCTTTAA 57.153 30.769 0.00 0.00 0.00 1.52
4362 5908 8.256611 TGAACTCTTATGCTGTGATCTTTAAC 57.743 34.615 0.00 0.00 0.00 2.01
4363 5909 7.334421 TGAACTCTTATGCTGTGATCTTTAACC 59.666 37.037 0.00 0.00 0.00 2.85
4364 5910 5.812642 ACTCTTATGCTGTGATCTTTAACCG 59.187 40.000 0.00 0.00 0.00 4.44
4365 5911 5.972935 TCTTATGCTGTGATCTTTAACCGA 58.027 37.500 0.00 0.00 0.00 4.69
4366 5912 6.042777 TCTTATGCTGTGATCTTTAACCGAG 58.957 40.000 0.00 0.00 0.00 4.63
4367 5913 2.972625 TGCTGTGATCTTTAACCGAGG 58.027 47.619 0.00 0.00 0.00 4.63
4368 5914 2.565391 TGCTGTGATCTTTAACCGAGGA 59.435 45.455 0.00 0.00 0.00 3.71
4369 5915 3.190874 GCTGTGATCTTTAACCGAGGAG 58.809 50.000 0.00 0.00 0.00 3.69
4371 5917 3.437213 TGTGATCTTTAACCGAGGAGGA 58.563 45.455 0.00 0.00 45.00 3.71
4372 5918 3.835978 TGTGATCTTTAACCGAGGAGGAA 59.164 43.478 0.00 0.00 45.00 3.36
4373 5919 4.285003 TGTGATCTTTAACCGAGGAGGAAA 59.715 41.667 0.00 0.00 45.00 3.13
4374 5920 4.870991 GTGATCTTTAACCGAGGAGGAAAG 59.129 45.833 0.00 2.97 45.00 2.62
4375 5921 4.775780 TGATCTTTAACCGAGGAGGAAAGA 59.224 41.667 14.88 14.88 43.01 2.52
4376 5922 5.247564 TGATCTTTAACCGAGGAGGAAAGAA 59.752 40.000 15.81 4.81 42.49 2.52
4377 5923 4.891260 TCTTTAACCGAGGAGGAAAGAAC 58.109 43.478 12.09 0.00 45.00 3.01
4378 5924 3.690475 TTAACCGAGGAGGAAAGAACC 57.310 47.619 0.00 0.00 45.00 3.62
4379 5925 1.430992 AACCGAGGAGGAAAGAACCA 58.569 50.000 0.00 0.00 45.00 3.67
4380 5926 1.430992 ACCGAGGAGGAAAGAACCAA 58.569 50.000 0.00 0.00 45.00 3.67
4381 5927 1.985895 ACCGAGGAGGAAAGAACCAAT 59.014 47.619 0.00 0.00 45.00 3.16
4382 5928 2.027100 ACCGAGGAGGAAAGAACCAATC 60.027 50.000 0.00 0.00 45.00 2.67
4383 5929 2.237392 CCGAGGAGGAAAGAACCAATCT 59.763 50.000 0.00 0.00 45.00 2.40
4384 5930 3.451178 CCGAGGAGGAAAGAACCAATCTA 59.549 47.826 0.00 0.00 45.00 1.98
4385 5931 4.101741 CCGAGGAGGAAAGAACCAATCTAT 59.898 45.833 0.00 0.00 45.00 1.98
4386 5932 5.304614 CCGAGGAGGAAAGAACCAATCTATA 59.695 44.000 0.00 0.00 45.00 1.31
4387 5933 6.183360 CCGAGGAGGAAAGAACCAATCTATAA 60.183 42.308 0.00 0.00 45.00 0.98
4388 5934 6.702282 CGAGGAGGAAAGAACCAATCTATAAC 59.298 42.308 0.00 0.00 37.42 1.89
4389 5935 6.583562 AGGAGGAAAGAACCAATCTATAACG 58.416 40.000 0.00 0.00 37.42 3.18
4390 5936 6.383147 AGGAGGAAAGAACCAATCTATAACGA 59.617 38.462 0.00 0.00 37.42 3.85
4391 5937 7.071321 AGGAGGAAAGAACCAATCTATAACGAT 59.929 37.037 0.00 0.00 37.42 3.73
4392 5938 7.385478 GGAGGAAAGAACCAATCTATAACGATC 59.615 40.741 0.00 0.00 37.42 3.69
4393 5939 7.217906 AGGAAAGAACCAATCTATAACGATCC 58.782 38.462 0.00 0.00 37.42 3.36
4394 5940 6.427242 GGAAAGAACCAATCTATAACGATCCC 59.573 42.308 0.00 0.00 37.42 3.85
4395 5941 6.749036 AAGAACCAATCTATAACGATCCCT 57.251 37.500 0.00 0.00 37.42 4.20
4396 5942 6.102897 AGAACCAATCTATAACGATCCCTG 57.897 41.667 0.00 0.00 36.32 4.45
4397 5943 4.273148 ACCAATCTATAACGATCCCTGC 57.727 45.455 0.00 0.00 0.00 4.85
4398 5944 3.008049 ACCAATCTATAACGATCCCTGCC 59.992 47.826 0.00 0.00 0.00 4.85
4399 5945 3.007940 CCAATCTATAACGATCCCTGCCA 59.992 47.826 0.00 0.00 0.00 4.92
4400 5946 4.504864 CCAATCTATAACGATCCCTGCCAA 60.505 45.833 0.00 0.00 0.00 4.52
4401 5947 4.974645 ATCTATAACGATCCCTGCCAAA 57.025 40.909 0.00 0.00 0.00 3.28
4402 5948 4.764050 TCTATAACGATCCCTGCCAAAA 57.236 40.909 0.00 0.00 0.00 2.44
4403 5949 4.703897 TCTATAACGATCCCTGCCAAAAG 58.296 43.478 0.00 0.00 0.00 2.27
4404 5950 2.871096 TAACGATCCCTGCCAAAAGT 57.129 45.000 0.00 0.00 0.00 2.66
4405 5951 1.995376 AACGATCCCTGCCAAAAGTT 58.005 45.000 0.00 0.00 0.00 2.66
4406 5952 2.871096 ACGATCCCTGCCAAAAGTTA 57.129 45.000 0.00 0.00 0.00 2.24
4407 5953 3.149005 ACGATCCCTGCCAAAAGTTAA 57.851 42.857 0.00 0.00 0.00 2.01
4408 5954 3.697166 ACGATCCCTGCCAAAAGTTAAT 58.303 40.909 0.00 0.00 0.00 1.40
4409 5955 4.086457 ACGATCCCTGCCAAAAGTTAATT 58.914 39.130 0.00 0.00 0.00 1.40
4410 5956 5.258051 ACGATCCCTGCCAAAAGTTAATTA 58.742 37.500 0.00 0.00 0.00 1.40
4411 5957 5.357032 ACGATCCCTGCCAAAAGTTAATTAG 59.643 40.000 0.00 0.00 0.00 1.73
4412 5958 5.221048 CGATCCCTGCCAAAAGTTAATTAGG 60.221 44.000 0.00 0.00 0.00 2.69
4413 5959 5.263872 TCCCTGCCAAAAGTTAATTAGGA 57.736 39.130 0.00 0.00 0.00 2.94
4414 5960 5.646215 TCCCTGCCAAAAGTTAATTAGGAA 58.354 37.500 0.00 0.00 0.00 3.36
4415 5961 6.078664 TCCCTGCCAAAAGTTAATTAGGAAA 58.921 36.000 0.00 0.00 0.00 3.13
4416 5962 6.728632 TCCCTGCCAAAAGTTAATTAGGAAAT 59.271 34.615 0.00 0.00 0.00 2.17
4417 5963 7.236640 TCCCTGCCAAAAGTTAATTAGGAAATT 59.763 33.333 0.00 0.00 38.80 1.82
4418 5964 8.536175 CCCTGCCAAAAGTTAATTAGGAAATTA 58.464 33.333 0.00 0.00 36.67 1.40
4419 5965 9.936759 CCTGCCAAAAGTTAATTAGGAAATTAA 57.063 29.630 0.37 0.37 42.53 1.40
4436 5982 8.433599 AGGAAATTAAGAATTAGGAGTAGGAGC 58.566 37.037 0.00 0.00 0.00 4.70
4437 5983 8.433599 GGAAATTAAGAATTAGGAGTAGGAGCT 58.566 37.037 0.00 0.00 0.00 4.09
4438 5984 9.267084 GAAATTAAGAATTAGGAGTAGGAGCTG 57.733 37.037 0.00 0.00 0.00 4.24
4439 5985 8.554490 AATTAAGAATTAGGAGTAGGAGCTGA 57.446 34.615 0.00 0.00 0.00 4.26
4440 5986 7.973048 TTAAGAATTAGGAGTAGGAGCTGAA 57.027 36.000 0.00 0.00 0.00 3.02
4441 5987 6.478512 AAGAATTAGGAGTAGGAGCTGAAG 57.521 41.667 0.00 0.00 0.00 3.02
4442 5988 5.524535 AGAATTAGGAGTAGGAGCTGAAGT 58.475 41.667 0.00 0.00 0.00 3.01
4443 5989 5.961421 AGAATTAGGAGTAGGAGCTGAAGTT 59.039 40.000 0.00 0.00 0.00 2.66
4444 5990 7.126733 AGAATTAGGAGTAGGAGCTGAAGTTA 58.873 38.462 0.00 0.00 0.00 2.24
4445 5991 7.787424 AGAATTAGGAGTAGGAGCTGAAGTTAT 59.213 37.037 0.00 0.00 0.00 1.89
4446 5992 7.922699 ATTAGGAGTAGGAGCTGAAGTTATT 57.077 36.000 0.00 0.00 0.00 1.40
4447 5993 5.862678 AGGAGTAGGAGCTGAAGTTATTC 57.137 43.478 0.00 0.00 35.87 1.75
4448 5994 5.273208 AGGAGTAGGAGCTGAAGTTATTCA 58.727 41.667 0.00 0.00 43.20 2.57
4449 5995 5.721960 AGGAGTAGGAGCTGAAGTTATTCAA 59.278 40.000 0.00 0.00 44.68 2.69
4450 5996 6.213600 AGGAGTAGGAGCTGAAGTTATTCAAA 59.786 38.462 0.00 0.00 44.68 2.69
4451 5997 6.879458 GGAGTAGGAGCTGAAGTTATTCAAAA 59.121 38.462 0.00 0.00 44.68 2.44
4452 5998 7.065204 GGAGTAGGAGCTGAAGTTATTCAAAAG 59.935 40.741 0.00 0.00 44.68 2.27
4453 5999 6.881602 AGTAGGAGCTGAAGTTATTCAAAAGG 59.118 38.462 0.00 0.00 44.68 3.11
4454 6000 5.880901 AGGAGCTGAAGTTATTCAAAAGGA 58.119 37.500 0.00 0.00 44.68 3.36
4455 6001 5.942826 AGGAGCTGAAGTTATTCAAAAGGAG 59.057 40.000 0.00 0.00 44.68 3.69
4456 6002 5.392487 GGAGCTGAAGTTATTCAAAAGGAGC 60.392 44.000 0.00 0.00 44.68 4.70
4457 6003 5.072741 AGCTGAAGTTATTCAAAAGGAGCA 58.927 37.500 0.00 0.00 44.68 4.26
4458 6004 5.048434 AGCTGAAGTTATTCAAAAGGAGCAC 60.048 40.000 0.00 0.00 44.68 4.40
4459 6005 5.048434 GCTGAAGTTATTCAAAAGGAGCACT 60.048 40.000 0.00 0.00 44.68 4.40
4460 6006 6.560253 TGAAGTTATTCAAAAGGAGCACTC 57.440 37.500 0.00 0.00 42.47 3.51
4461 6007 6.061441 TGAAGTTATTCAAAAGGAGCACTCA 58.939 36.000 0.00 0.00 42.47 3.41
4462 6008 6.716628 TGAAGTTATTCAAAAGGAGCACTCAT 59.283 34.615 0.00 0.00 42.47 2.90
4463 6009 6.749923 AGTTATTCAAAAGGAGCACTCATC 57.250 37.500 0.00 0.00 0.00 2.92
4464 6010 6.240894 AGTTATTCAAAAGGAGCACTCATCA 58.759 36.000 0.00 0.00 0.00 3.07
4465 6011 6.716628 AGTTATTCAAAAGGAGCACTCATCAA 59.283 34.615 0.00 0.00 0.00 2.57
4466 6012 4.836125 TTCAAAAGGAGCACTCATCAAC 57.164 40.909 0.00 0.00 0.00 3.18
4467 6013 2.807967 TCAAAAGGAGCACTCATCAACG 59.192 45.455 0.00 0.00 0.00 4.10
4468 6014 2.807967 CAAAAGGAGCACTCATCAACGA 59.192 45.455 0.00 0.00 0.00 3.85
4469 6015 2.086054 AAGGAGCACTCATCAACGAC 57.914 50.000 0.00 0.00 0.00 4.34
4470 6016 0.969149 AGGAGCACTCATCAACGACA 59.031 50.000 0.00 0.00 0.00 4.35
4471 6017 1.344438 AGGAGCACTCATCAACGACAA 59.656 47.619 0.00 0.00 0.00 3.18
4472 6018 1.728971 GGAGCACTCATCAACGACAAG 59.271 52.381 0.00 0.00 0.00 3.16
4473 6019 1.127582 GAGCACTCATCAACGACAAGC 59.872 52.381 0.00 0.00 0.00 4.01
4474 6020 1.151668 GCACTCATCAACGACAAGCT 58.848 50.000 0.00 0.00 0.00 3.74
4475 6021 2.029020 AGCACTCATCAACGACAAGCTA 60.029 45.455 0.00 0.00 0.00 3.32
4476 6022 2.092838 GCACTCATCAACGACAAGCTAC 59.907 50.000 0.00 0.00 0.00 3.58
4477 6023 2.668457 CACTCATCAACGACAAGCTACC 59.332 50.000 0.00 0.00 0.00 3.18
4478 6024 2.563179 ACTCATCAACGACAAGCTACCT 59.437 45.455 0.00 0.00 0.00 3.08
4479 6025 2.926200 CTCATCAACGACAAGCTACCTG 59.074 50.000 0.00 0.00 0.00 4.00
4480 6026 2.299013 TCATCAACGACAAGCTACCTGT 59.701 45.455 0.00 0.00 0.00 4.00
4481 6027 2.902705 TCAACGACAAGCTACCTGTT 57.097 45.000 0.00 0.00 0.00 3.16
4482 6028 3.188159 TCAACGACAAGCTACCTGTTT 57.812 42.857 0.00 0.00 0.00 2.83
4483 6029 3.537580 TCAACGACAAGCTACCTGTTTT 58.462 40.909 0.00 0.00 0.00 2.43
4484 6030 3.311322 TCAACGACAAGCTACCTGTTTTG 59.689 43.478 0.00 0.00 0.00 2.44
4485 6031 3.188159 ACGACAAGCTACCTGTTTTGA 57.812 42.857 0.00 0.00 0.00 2.69
4486 6032 3.131396 ACGACAAGCTACCTGTTTTGAG 58.869 45.455 0.00 0.00 0.00 3.02
4487 6033 2.096218 CGACAAGCTACCTGTTTTGAGC 60.096 50.000 0.00 0.00 35.07 4.26
4488 6034 2.226674 GACAAGCTACCTGTTTTGAGCC 59.773 50.000 0.00 0.00 35.45 4.70
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.705604 CTCTGCTAGAGTTGCTCTAAGC 58.294 50.000 7.22 11.65 41.74 3.09
38 39 6.585695 ATTGGCAATTATTATGGAGCTCTG 57.414 37.500 14.64 1.35 0.00 3.35
39 40 7.341256 CCATATTGGCAATTATTATGGAGCTCT 59.659 37.037 25.50 0.00 36.10 4.09
55 56 2.711009 CTCCCTAACCTCCATATTGGCA 59.289 50.000 0.00 0.00 37.47 4.92
83 84 6.970054 CCATATGGAGACTCTACTAGAGTGCA 60.970 46.154 21.32 10.94 46.33 4.57
93 94 3.928754 AGCAACCCATATGGAGACTCTA 58.071 45.455 24.00 0.00 37.39 2.43
100 101 3.052329 TGGACATAGCAACCCATATGGA 58.948 45.455 24.00 1.76 37.39 3.41
117 118 5.078411 AGGACGATCTATAATGCATGGAC 57.922 43.478 0.00 0.00 0.00 4.02
118 119 4.160439 GGAGGACGATCTATAATGCATGGA 59.840 45.833 0.00 0.00 0.00 3.41
130 131 5.014755 AGAGGTTAGATATGGAGGACGATCT 59.985 44.000 0.00 0.00 33.32 2.75
133 134 4.104261 TGAGAGGTTAGATATGGAGGACGA 59.896 45.833 0.00 0.00 0.00 4.20
134 135 4.399219 TGAGAGGTTAGATATGGAGGACG 58.601 47.826 0.00 0.00 0.00 4.79
149 150 3.511934 AGCAAATACGAAGACTGAGAGGT 59.488 43.478 0.00 0.00 0.00 3.85
150 151 3.862267 CAGCAAATACGAAGACTGAGAGG 59.138 47.826 0.00 0.00 0.00 3.69
158 159 4.245660 CCTCAAGACAGCAAATACGAAGA 58.754 43.478 0.00 0.00 0.00 2.87
169 170 3.062042 CAAAATTTGGCCTCAAGACAGC 58.938 45.455 3.32 0.00 33.98 4.40
170 171 3.656559 CCAAAATTTGGCCTCAAGACAG 58.343 45.455 12.23 0.00 45.17 3.51
185 186 4.032960 TGGATGTAGTGTGCTCCAAAAT 57.967 40.909 0.00 0.00 34.91 1.82
207 208 2.389998 CTACGCGCCAAACAATTTTGT 58.610 42.857 5.73 0.00 44.72 2.83
219 220 0.947180 TGTGAAGTTTCCTACGCGCC 60.947 55.000 5.73 0.00 0.00 6.53
221 222 2.092211 GTGATGTGAAGTTTCCTACGCG 59.908 50.000 3.53 3.53 0.00 6.01
232 233 0.543749 GAGGAGGGGGTGATGTGAAG 59.456 60.000 0.00 0.00 0.00 3.02
266 268 2.507407 TCTTTTTCCCCCAATCTCCG 57.493 50.000 0.00 0.00 0.00 4.63
269 271 6.596869 TGAGATATCTTTTTCCCCCAATCT 57.403 37.500 6.70 0.00 0.00 2.40
270 272 7.506938 TCAATGAGATATCTTTTTCCCCCAATC 59.493 37.037 6.70 0.00 0.00 2.67
290 292 1.667595 TGGGACCCACTCATCAATGA 58.332 50.000 9.95 0.00 35.16 2.57
322 324 5.410924 CAAACTAAGGATCGTCATGTCTCA 58.589 41.667 0.00 0.00 0.00 3.27
331 333 0.389426 ACGCGCAAACTAAGGATCGT 60.389 50.000 5.73 0.00 0.00 3.73
355 357 4.416516 TGCATATGGAAGCTAGCTACCTA 58.583 43.478 19.70 11.47 0.00 3.08
356 358 3.242867 TGCATATGGAAGCTAGCTACCT 58.757 45.455 19.70 9.78 0.00 3.08
357 359 3.685139 TGCATATGGAAGCTAGCTACC 57.315 47.619 19.70 12.90 0.00 3.18
358 360 6.376978 CAAAATGCATATGGAAGCTAGCTAC 58.623 40.000 19.70 14.78 0.00 3.58
367 369 2.100584 GGTCGCCAAAATGCATATGGAA 59.899 45.455 27.27 15.46 36.27 3.53
384 386 2.229062 AGAGTCGCCATATATGTGGTCG 59.771 50.000 18.66 19.98 41.47 4.79
460 464 7.041721 TGTTACTGCTCGATAAACTTCATGAT 58.958 34.615 0.00 0.00 0.00 2.45
559 564 1.068333 ACATGGCGTCAATTGTCAAGC 60.068 47.619 5.13 6.95 0.00 4.01
643 648 2.180276 GTACACACCCTGGATCAGAGT 58.820 52.381 0.00 0.00 32.44 3.24
660 665 1.183676 ACAGGTGGAGGTGGTCGTAC 61.184 60.000 0.00 0.00 0.00 3.67
661 666 1.154454 ACAGGTGGAGGTGGTCGTA 59.846 57.895 0.00 0.00 0.00 3.43
730 735 1.982958 AGGTCATTGTAACTTCGGGGT 59.017 47.619 0.00 0.00 0.00 4.95
875 880 5.449588 GGGCACAGTGAACTCAATCATATTG 60.450 44.000 4.15 0.00 0.00 1.90
926 931 5.474825 TGCATTCGAGTGTTGTAATCTACA 58.525 37.500 9.83 0.00 36.79 2.74
950 955 3.671971 CGTCAATGAAGAAGCGAGTCTCT 60.672 47.826 0.00 0.00 0.00 3.10
955 960 1.354040 AGCGTCAATGAAGAAGCGAG 58.646 50.000 0.00 0.00 45.69 5.03
975 980 2.083774 CCTCAGTTGCGATGGCTTTAA 58.916 47.619 0.15 0.00 40.82 1.52
1116 1121 9.495572 AGAAATGGATATAACTACTAAGCTTGC 57.504 33.333 9.86 0.00 0.00 4.01
1220 1226 7.224297 ACAAAGTACAGTACATTGGACAGAAT 58.776 34.615 25.23 6.72 40.55 2.40
1284 1299 6.721318 AGCAAACTAGGTTCCTTAATGATCA 58.279 36.000 0.00 0.00 0.00 2.92
1441 1459 8.816640 ACTGAAGACGAATTTGCAATAAAAAT 57.183 26.923 0.00 0.00 0.00 1.82
1449 1467 4.891627 TTGAACTGAAGACGAATTTGCA 57.108 36.364 0.00 0.00 0.00 4.08
1450 1468 5.693814 AGATTGAACTGAAGACGAATTTGC 58.306 37.500 0.00 0.00 0.00 3.68
1613 1647 8.621532 AGTACTTTAAATTGTGCAGATTCTGA 57.378 30.769 17.87 0.08 32.44 3.27
1616 1650 7.816640 TGGAGTACTTTAAATTGTGCAGATTC 58.183 34.615 0.00 0.00 0.00 2.52
1645 1679 7.399191 AGCATCAATTGGATTTATCTATGGCAT 59.601 33.333 4.88 4.88 32.57 4.40
1699 1733 7.573627 AGTTTTATCTACAGCACTTTTTCGTC 58.426 34.615 0.00 0.00 0.00 4.20
1700 1734 7.492352 AGTTTTATCTACAGCACTTTTTCGT 57.508 32.000 0.00 0.00 0.00 3.85
2138 2201 9.830294 GTACCAAAATACTTGTTACCACATAAC 57.170 33.333 0.00 0.00 43.18 1.89
2187 2250 9.623350 CAGGTTTCAAAATTTCAACAATGTTTT 57.377 25.926 0.00 0.00 0.00 2.43
2202 2265 7.118496 ACATGTTTGTATCCAGGTTTCAAAA 57.882 32.000 0.00 0.00 33.16 2.44
2266 2342 7.224557 CGAAGGAAACCAATTTCTTTTGTCAAT 59.775 33.333 0.00 0.00 42.42 2.57
2276 2352 7.813645 ACACTATTACGAAGGAAACCAATTTC 58.186 34.615 0.00 0.00 43.11 2.17
2277 2353 7.754851 ACACTATTACGAAGGAAACCAATTT 57.245 32.000 0.00 0.00 0.00 1.82
2334 2419 3.194861 GCTGGTATAATGAGCGTGTTGA 58.805 45.455 0.00 0.00 0.00 3.18
2338 2423 2.533266 AGGCTGGTATAATGAGCGTG 57.467 50.000 0.00 0.00 33.26 5.34
2359 2444 5.390567 CGTGAAACACCATAACTTTCTAGGC 60.391 44.000 0.00 0.00 35.74 3.93
2376 2461 6.963242 TGTCTACTCGTATAACATCGTGAAAC 59.037 38.462 0.00 0.00 0.00 2.78
2394 2479 1.411246 TGCACCACGAGTTTGTCTACT 59.589 47.619 0.00 0.00 0.00 2.57
2433 2518 7.166691 ACGTCGGCTAGTTGGATTAATATAT 57.833 36.000 0.00 0.00 0.00 0.86
2434 2519 6.579666 ACGTCGGCTAGTTGGATTAATATA 57.420 37.500 0.00 0.00 0.00 0.86
2435 2520 5.464030 ACGTCGGCTAGTTGGATTAATAT 57.536 39.130 0.00 0.00 0.00 1.28
2436 2521 4.924305 ACGTCGGCTAGTTGGATTAATA 57.076 40.909 0.00 0.00 0.00 0.98
2437 2522 3.814005 ACGTCGGCTAGTTGGATTAAT 57.186 42.857 0.00 0.00 0.00 1.40
2486 2572 4.340617 CCCCATTTTGCAAAGTAGTCCTA 58.659 43.478 12.41 0.00 0.00 2.94
2509 2595 1.682740 CTCGACTACCCCCTCTTCTC 58.317 60.000 0.00 0.00 0.00 2.87
2528 2614 2.419324 CTGGTTGAGCTCATCTTTCAGC 59.581 50.000 19.04 11.57 35.73 4.26
2609 2722 4.461992 AAACAACGTGTAAATCTCACCG 57.538 40.909 0.00 0.00 32.86 4.94
2624 2737 5.106673 CCCTTCTTCGATTCCACTAAACAAC 60.107 44.000 0.00 0.00 0.00 3.32
2661 2774 4.081406 GGCATATATGGGAGCATGAAACA 58.919 43.478 14.51 0.00 0.00 2.83
2772 2885 0.247736 AGCACATCTTCCTCGACACC 59.752 55.000 0.00 0.00 0.00 4.16
2941 3054 5.592282 TCTTCCACAACAGCATCTAAAAACA 59.408 36.000 0.00 0.00 0.00 2.83
3091 3210 7.068103 TCACAGTGATATTCTTTTGTGTTTGGT 59.932 33.333 0.00 0.00 37.69 3.67
3133 3252 2.554032 CCTTTCGGGATGCCATATTCAC 59.446 50.000 3.39 0.00 37.23 3.18
3224 4716 1.578583 GATGAAACCGGTATGGGTCG 58.421 55.000 8.00 0.00 35.58 4.79
3381 4875 4.757149 CGGAAAAGGAGAAGTGAGTTTGAT 59.243 41.667 0.00 0.00 0.00 2.57
3463 4957 0.733223 GCTTTCCAGACGACGTCTCC 60.733 60.000 27.03 1.91 41.37 3.71
3510 5008 5.284861 AGGTACGTCCATGCAAATACATA 57.715 39.130 0.00 0.00 39.02 2.29
3567 5082 1.215173 TGATGCCCCAGAAACCATAGG 59.785 52.381 0.00 0.00 0.00 2.57
3727 5242 9.812347 TCCATGCATAAATAGAATGATAAACCT 57.188 29.630 0.00 0.00 0.00 3.50
3735 5279 9.353999 CACATCAATCCATGCATAAATAGAATG 57.646 33.333 0.00 1.44 0.00 2.67
3822 5367 8.887264 TTTGTGGGAATTTCTAGCCTATTTTA 57.113 30.769 0.00 0.00 0.00 1.52
3939 5485 3.322254 TGATTTTAATGGTGGCAACGGTT 59.678 39.130 0.00 0.00 42.51 4.44
4016 5562 1.228245 GTGAGGGCTTCTGTGGCAA 60.228 57.895 0.00 0.00 0.00 4.52
4024 5570 2.087646 GGAAACATCAGTGAGGGCTTC 58.912 52.381 9.95 10.81 0.00 3.86
4035 5581 1.066858 GGAGTCGAGCAGGAAACATCA 60.067 52.381 0.00 0.00 0.00 3.07
4041 5587 1.908299 TGCTGGAGTCGAGCAGGAA 60.908 57.895 24.08 3.31 41.56 3.36
4056 5602 4.711949 CGGCTCTGGCAACCTGCT 62.712 66.667 0.00 0.00 44.28 4.24
4066 5612 2.199652 TTTTGTTGGCCCGGCTCTG 61.200 57.895 9.86 0.00 0.00 3.35
4067 5613 2.197324 TTTTGTTGGCCCGGCTCT 59.803 55.556 9.86 0.00 0.00 4.09
4068 5614 2.338620 GTTTTGTTGGCCCGGCTC 59.661 61.111 9.86 0.00 0.00 4.70
4069 5615 3.230990 GGTTTTGTTGGCCCGGCT 61.231 61.111 9.86 0.00 0.00 5.52
4070 5616 3.513768 CTGGTTTTGTTGGCCCGGC 62.514 63.158 0.00 0.00 0.00 6.13
4071 5617 2.733945 CTGGTTTTGTTGGCCCGG 59.266 61.111 0.00 0.00 0.00 5.73
4072 5618 2.733945 CCTGGTTTTGTTGGCCCG 59.266 61.111 0.00 0.00 0.00 6.13
4073 5619 3.147132 CCCTGGTTTTGTTGGCCC 58.853 61.111 0.00 0.00 0.00 5.80
4074 5620 2.425592 GCCCTGGTTTTGTTGGCC 59.574 61.111 0.00 0.00 36.07 5.36
4075 5621 1.767654 ATGGCCCTGGTTTTGTTGGC 61.768 55.000 0.00 0.00 41.42 4.52
4076 5622 0.035176 CATGGCCCTGGTTTTGTTGG 59.965 55.000 0.00 0.00 0.00 3.77
4077 5623 0.758123 ACATGGCCCTGGTTTTGTTG 59.242 50.000 13.03 0.00 0.00 3.33
4078 5624 0.758123 CACATGGCCCTGGTTTTGTT 59.242 50.000 13.03 0.00 0.00 2.83
4079 5625 1.757423 GCACATGGCCCTGGTTTTGT 61.757 55.000 13.03 0.00 36.11 2.83
4080 5626 1.004679 GCACATGGCCCTGGTTTTG 60.005 57.895 13.03 2.67 36.11 2.44
4081 5627 2.573083 CGCACATGGCCCTGGTTTT 61.573 57.895 13.03 0.00 40.31 2.43
4082 5628 2.990967 CGCACATGGCCCTGGTTT 60.991 61.111 13.03 0.00 40.31 3.27
4083 5629 2.992817 TTTCGCACATGGCCCTGGTT 62.993 55.000 13.03 0.00 40.31 3.67
4084 5630 3.505790 TTTCGCACATGGCCCTGGT 62.506 57.895 13.03 0.00 40.31 4.00
4085 5631 2.676121 TTTCGCACATGGCCCTGG 60.676 61.111 13.03 2.83 40.31 4.45
4086 5632 0.676466 TAGTTTCGCACATGGCCCTG 60.676 55.000 6.46 6.46 40.31 4.45
4087 5633 0.037590 TTAGTTTCGCACATGGCCCT 59.962 50.000 0.00 0.00 40.31 5.19
4088 5634 0.885196 TTTAGTTTCGCACATGGCCC 59.115 50.000 0.00 0.00 40.31 5.80
4089 5635 2.715737 TTTTAGTTTCGCACATGGCC 57.284 45.000 0.00 0.00 40.31 5.36
4106 5652 4.870021 AGTGAGATAGAGCCCCATTTTT 57.130 40.909 0.00 0.00 0.00 1.94
4107 5653 5.975988 TTAGTGAGATAGAGCCCCATTTT 57.024 39.130 0.00 0.00 0.00 1.82
4108 5654 5.975988 TTTAGTGAGATAGAGCCCCATTT 57.024 39.130 0.00 0.00 0.00 2.32
4109 5655 5.975988 TTTTAGTGAGATAGAGCCCCATT 57.024 39.130 0.00 0.00 0.00 3.16
4110 5656 5.975988 TTTTTAGTGAGATAGAGCCCCAT 57.024 39.130 0.00 0.00 0.00 4.00
4140 5686 8.786898 CCATATGCTACATAATAGTTGCTTGTT 58.213 33.333 0.00 0.00 40.21 2.83
4141 5687 7.939039 ACCATATGCTACATAATAGTTGCTTGT 59.061 33.333 0.00 0.00 40.21 3.16
4142 5688 8.327941 ACCATATGCTACATAATAGTTGCTTG 57.672 34.615 0.00 0.00 40.21 4.01
4144 5690 9.605275 CATACCATATGCTACATAATAGTTGCT 57.395 33.333 0.00 0.00 40.21 3.91
4145 5691 9.599866 TCATACCATATGCTACATAATAGTTGC 57.400 33.333 0.00 0.00 40.01 4.17
4150 5696 9.965824 CGACATCATACCATATGCTACATAATA 57.034 33.333 0.00 0.00 0.00 0.98
4151 5697 8.478066 ACGACATCATACCATATGCTACATAAT 58.522 33.333 0.00 0.00 0.00 1.28
4152 5698 7.836842 ACGACATCATACCATATGCTACATAA 58.163 34.615 0.00 0.00 0.00 1.90
4153 5699 7.404671 ACGACATCATACCATATGCTACATA 57.595 36.000 0.00 0.00 0.00 2.29
4154 5700 6.286240 ACGACATCATACCATATGCTACAT 57.714 37.500 0.00 0.00 0.00 2.29
4155 5701 5.722021 ACGACATCATACCATATGCTACA 57.278 39.130 0.00 0.00 0.00 2.74
4156 5702 6.617879 TGTACGACATCATACCATATGCTAC 58.382 40.000 0.00 0.00 0.00 3.58
4157 5703 6.827586 TGTACGACATCATACCATATGCTA 57.172 37.500 0.00 0.00 0.00 3.49
4158 5704 5.722021 TGTACGACATCATACCATATGCT 57.278 39.130 0.00 0.00 0.00 3.79
4159 5705 6.035005 GTCATGTACGACATCATACCATATGC 59.965 42.308 0.00 0.00 36.53 3.14
4160 5706 7.090173 TGTCATGTACGACATCATACCATATG 58.910 38.462 0.00 0.00 40.94 1.78
4161 5707 7.227049 TGTCATGTACGACATCATACCATAT 57.773 36.000 0.02 0.00 40.94 1.78
4162 5708 6.642707 TGTCATGTACGACATCATACCATA 57.357 37.500 0.02 0.00 40.94 2.74
4163 5709 5.529581 TGTCATGTACGACATCATACCAT 57.470 39.130 0.02 0.00 40.94 3.55
4164 5710 4.736464 GCTGTCATGTACGACATCATACCA 60.736 45.833 4.35 0.00 44.61 3.25
4165 5711 3.736252 GCTGTCATGTACGACATCATACC 59.264 47.826 4.35 0.00 44.61 2.73
4166 5712 4.442403 CAGCTGTCATGTACGACATCATAC 59.558 45.833 5.25 0.00 44.61 2.39
4167 5713 4.499696 CCAGCTGTCATGTACGACATCATA 60.500 45.833 13.81 0.00 44.61 2.15
4168 5714 3.451526 CAGCTGTCATGTACGACATCAT 58.548 45.455 5.25 0.00 44.61 2.45
4169 5715 2.417243 CCAGCTGTCATGTACGACATCA 60.417 50.000 13.81 0.00 44.61 3.07
4170 5716 2.159240 TCCAGCTGTCATGTACGACATC 60.159 50.000 13.81 1.32 44.61 3.06
4171 5717 1.824852 TCCAGCTGTCATGTACGACAT 59.175 47.619 13.81 0.00 44.61 3.06
4172 5718 1.253100 TCCAGCTGTCATGTACGACA 58.747 50.000 13.81 3.93 43.54 4.35
4173 5719 2.586258 ATCCAGCTGTCATGTACGAC 57.414 50.000 13.81 0.00 36.40 4.34
4174 5720 7.696992 TTATATATCCAGCTGTCATGTACGA 57.303 36.000 13.81 0.00 0.00 3.43
4175 5721 8.648097 GTTTTATATATCCAGCTGTCATGTACG 58.352 37.037 13.81 0.00 0.00 3.67
4176 5722 9.712305 AGTTTTATATATCCAGCTGTCATGTAC 57.288 33.333 13.81 0.00 0.00 2.90
4177 5723 9.929180 GAGTTTTATATATCCAGCTGTCATGTA 57.071 33.333 13.81 7.33 0.00 2.29
4178 5724 8.432013 TGAGTTTTATATATCCAGCTGTCATGT 58.568 33.333 13.81 5.25 0.00 3.21
4179 5725 8.837788 TGAGTTTTATATATCCAGCTGTCATG 57.162 34.615 13.81 0.00 0.00 3.07
4181 5727 9.929180 GTATGAGTTTTATATATCCAGCTGTCA 57.071 33.333 13.81 5.13 0.00 3.58
4182 5728 9.372369 GGTATGAGTTTTATATATCCAGCTGTC 57.628 37.037 13.81 0.00 0.00 3.51
4183 5729 9.105844 AGGTATGAGTTTTATATATCCAGCTGT 57.894 33.333 13.81 0.00 0.00 4.40
4195 5741 7.931948 CGGGAGTTGAATAGGTATGAGTTTTAT 59.068 37.037 0.00 0.00 0.00 1.40
4196 5742 7.270047 CGGGAGTTGAATAGGTATGAGTTTTA 58.730 38.462 0.00 0.00 0.00 1.52
4197 5743 6.113411 CGGGAGTTGAATAGGTATGAGTTTT 58.887 40.000 0.00 0.00 0.00 2.43
4198 5744 5.396436 CCGGGAGTTGAATAGGTATGAGTTT 60.396 44.000 0.00 0.00 0.00 2.66
4199 5745 4.101119 CCGGGAGTTGAATAGGTATGAGTT 59.899 45.833 0.00 0.00 0.00 3.01
4200 5746 3.641906 CCGGGAGTTGAATAGGTATGAGT 59.358 47.826 0.00 0.00 0.00 3.41
4201 5747 3.641906 ACCGGGAGTTGAATAGGTATGAG 59.358 47.826 6.32 0.00 0.00 2.90
4202 5748 3.649843 ACCGGGAGTTGAATAGGTATGA 58.350 45.455 6.32 0.00 0.00 2.15
4203 5749 4.417426 AACCGGGAGTTGAATAGGTATG 57.583 45.455 6.32 0.00 37.29 2.39
4214 5760 7.830201 TCAATAAACATTATACAACCGGGAGTT 59.170 33.333 6.32 0.00 40.16 3.01
4215 5761 7.340256 TCAATAAACATTATACAACCGGGAGT 58.660 34.615 6.32 6.31 0.00 3.85
4216 5762 7.795482 TCAATAAACATTATACAACCGGGAG 57.205 36.000 6.32 0.00 0.00 4.30
4217 5763 7.610692 TGTTCAATAAACATTATACAACCGGGA 59.389 33.333 6.32 0.00 42.95 5.14
4218 5764 7.763356 TGTTCAATAAACATTATACAACCGGG 58.237 34.615 6.32 0.00 42.95 5.73
4219 5765 9.068008 GTTGTTCAATAAACATTATACAACCGG 57.932 33.333 0.00 0.00 46.94 5.28
4220 5766 9.613957 TGTTGTTCAATAAACATTATACAACCG 57.386 29.630 16.77 0.00 46.94 4.44
4263 5809 8.866956 GCCATCATTGAAGATTTAGTTTCAAAG 58.133 33.333 4.06 0.82 43.95 2.77
4264 5810 8.366401 TGCCATCATTGAAGATTTAGTTTCAAA 58.634 29.630 4.06 0.00 43.95 2.69
4265 5811 7.894708 TGCCATCATTGAAGATTTAGTTTCAA 58.105 30.769 2.58 2.58 44.60 2.69
4266 5812 7.465353 TGCCATCATTGAAGATTTAGTTTCA 57.535 32.000 0.00 0.00 0.00 2.69
4267 5813 7.008628 CGTTGCCATCATTGAAGATTTAGTTTC 59.991 37.037 0.00 0.00 0.00 2.78
4268 5814 6.808212 CGTTGCCATCATTGAAGATTTAGTTT 59.192 34.615 0.00 0.00 0.00 2.66
4269 5815 6.071952 ACGTTGCCATCATTGAAGATTTAGTT 60.072 34.615 0.00 0.00 0.00 2.24
4270 5816 5.415701 ACGTTGCCATCATTGAAGATTTAGT 59.584 36.000 0.00 0.00 0.00 2.24
4271 5817 5.740569 CACGTTGCCATCATTGAAGATTTAG 59.259 40.000 0.00 0.00 0.00 1.85
4272 5818 5.392919 CCACGTTGCCATCATTGAAGATTTA 60.393 40.000 0.00 0.00 0.00 1.40
4273 5819 4.487948 CACGTTGCCATCATTGAAGATTT 58.512 39.130 0.00 0.00 0.00 2.17
4274 5820 3.119388 CCACGTTGCCATCATTGAAGATT 60.119 43.478 0.00 0.00 0.00 2.40
4275 5821 2.424601 CCACGTTGCCATCATTGAAGAT 59.575 45.455 0.00 0.00 0.00 2.40
4276 5822 1.811965 CCACGTTGCCATCATTGAAGA 59.188 47.619 0.00 0.00 0.00 2.87
4277 5823 1.541147 ACCACGTTGCCATCATTGAAG 59.459 47.619 0.00 0.00 0.00 3.02
4278 5824 1.269174 CACCACGTTGCCATCATTGAA 59.731 47.619 0.00 0.00 0.00 2.69
4279 5825 0.880441 CACCACGTTGCCATCATTGA 59.120 50.000 0.00 0.00 0.00 2.57
4280 5826 0.109179 CCACCACGTTGCCATCATTG 60.109 55.000 0.00 0.00 0.00 2.82
4281 5827 1.250154 CCCACCACGTTGCCATCATT 61.250 55.000 0.00 0.00 0.00 2.57
4282 5828 1.678635 CCCACCACGTTGCCATCAT 60.679 57.895 0.00 0.00 0.00 2.45
4283 5829 2.282110 CCCACCACGTTGCCATCA 60.282 61.111 0.00 0.00 0.00 3.07
4284 5830 3.061848 CCCCACCACGTTGCCATC 61.062 66.667 0.00 0.00 0.00 3.51
4288 5834 4.054825 CATGCCCCACCACGTTGC 62.055 66.667 0.00 0.00 0.00 4.17
4289 5835 2.597217 ACATGCCCCACCACGTTG 60.597 61.111 0.00 0.00 0.00 4.10
4290 5836 2.597217 CACATGCCCCACCACGTT 60.597 61.111 0.00 0.00 0.00 3.99
4291 5837 4.659172 CCACATGCCCCACCACGT 62.659 66.667 0.00 0.00 0.00 4.49
4292 5838 4.659172 ACCACATGCCCCACCACG 62.659 66.667 0.00 0.00 0.00 4.94
4293 5839 2.676471 GACCACATGCCCCACCAC 60.676 66.667 0.00 0.00 0.00 4.16
4294 5840 3.181530 TGACCACATGCCCCACCA 61.182 61.111 0.00 0.00 0.00 4.17
4295 5841 2.676471 GTGACCACATGCCCCACC 60.676 66.667 0.00 0.00 0.00 4.61
4296 5842 2.819984 ATCGTGACCACATGCCCCAC 62.820 60.000 0.00 0.00 33.49 4.61
4297 5843 1.268283 TATCGTGACCACATGCCCCA 61.268 55.000 0.00 0.00 33.49 4.96
4298 5844 0.532862 CTATCGTGACCACATGCCCC 60.533 60.000 0.00 0.00 33.49 5.80
4299 5845 1.160329 GCTATCGTGACCACATGCCC 61.160 60.000 0.00 0.00 33.49 5.36
4300 5846 0.179073 AGCTATCGTGACCACATGCC 60.179 55.000 0.00 0.00 33.49 4.40
4301 5847 1.212616 GAGCTATCGTGACCACATGC 58.787 55.000 0.00 0.00 33.49 4.06
4302 5848 2.584492 TGAGCTATCGTGACCACATG 57.416 50.000 0.85 0.00 0.00 3.21
4303 5849 2.432146 ACATGAGCTATCGTGACCACAT 59.568 45.455 0.00 0.00 43.98 3.21
4304 5850 1.824852 ACATGAGCTATCGTGACCACA 59.175 47.619 0.00 0.00 43.98 4.17
4305 5851 2.196749 CACATGAGCTATCGTGACCAC 58.803 52.381 0.00 0.00 43.98 4.16
4306 5852 1.136891 CCACATGAGCTATCGTGACCA 59.863 52.381 0.00 0.00 43.98 4.02
4307 5853 1.858091 CCACATGAGCTATCGTGACC 58.142 55.000 0.00 0.00 43.98 4.02
4308 5854 1.212616 GCCACATGAGCTATCGTGAC 58.787 55.000 0.00 0.00 43.98 3.67
4309 5855 0.249031 CGCCACATGAGCTATCGTGA 60.249 55.000 0.00 0.00 43.98 4.35
4310 5856 0.249031 TCGCCACATGAGCTATCGTG 60.249 55.000 0.00 0.00 46.22 4.35
4311 5857 0.459899 TTCGCCACATGAGCTATCGT 59.540 50.000 0.00 0.00 0.00 3.73
4312 5858 1.723542 GATTCGCCACATGAGCTATCG 59.276 52.381 0.00 0.00 0.00 2.92
4313 5859 2.072298 GGATTCGCCACATGAGCTATC 58.928 52.381 0.00 7.62 36.34 2.08
4314 5860 1.271054 GGGATTCGCCACATGAGCTAT 60.271 52.381 0.00 0.00 38.95 2.97
4315 5861 0.106708 GGGATTCGCCACATGAGCTA 59.893 55.000 0.00 0.00 38.95 3.32
4316 5862 1.153086 GGGATTCGCCACATGAGCT 60.153 57.895 0.00 0.00 38.95 4.09
4317 5863 0.749454 AAGGGATTCGCCACATGAGC 60.749 55.000 0.00 0.32 38.95 4.26
4318 5864 1.402968 CAAAGGGATTCGCCACATGAG 59.597 52.381 0.00 0.00 38.95 2.90
4319 5865 1.004161 TCAAAGGGATTCGCCACATGA 59.996 47.619 0.00 0.00 38.95 3.07
4320 5866 1.462616 TCAAAGGGATTCGCCACATG 58.537 50.000 0.00 0.00 38.95 3.21
4321 5867 1.818674 GTTCAAAGGGATTCGCCACAT 59.181 47.619 0.00 0.00 38.95 3.21
4322 5868 1.202879 AGTTCAAAGGGATTCGCCACA 60.203 47.619 0.00 0.00 38.95 4.17
4323 5869 1.468914 GAGTTCAAAGGGATTCGCCAC 59.531 52.381 0.00 0.00 38.95 5.01
4324 5870 1.351017 AGAGTTCAAAGGGATTCGCCA 59.649 47.619 0.00 0.00 38.95 5.69
4325 5871 2.115343 AGAGTTCAAAGGGATTCGCC 57.885 50.000 0.00 0.00 0.00 5.54
4326 5872 4.496507 GCATAAGAGTTCAAAGGGATTCGC 60.497 45.833 0.00 0.00 0.00 4.70
4327 5873 4.878397 AGCATAAGAGTTCAAAGGGATTCG 59.122 41.667 0.00 0.00 0.00 3.34
4328 5874 5.649831 ACAGCATAAGAGTTCAAAGGGATTC 59.350 40.000 0.00 0.00 0.00 2.52
4329 5875 5.416952 CACAGCATAAGAGTTCAAAGGGATT 59.583 40.000 0.00 0.00 0.00 3.01
4330 5876 4.946157 CACAGCATAAGAGTTCAAAGGGAT 59.054 41.667 0.00 0.00 0.00 3.85
4331 5877 4.041567 TCACAGCATAAGAGTTCAAAGGGA 59.958 41.667 0.00 0.00 0.00 4.20
4332 5878 4.326826 TCACAGCATAAGAGTTCAAAGGG 58.673 43.478 0.00 0.00 0.00 3.95
4333 5879 5.879223 AGATCACAGCATAAGAGTTCAAAGG 59.121 40.000 0.00 0.00 0.00 3.11
4334 5880 6.981762 AGATCACAGCATAAGAGTTCAAAG 57.018 37.500 0.00 0.00 0.00 2.77
4335 5881 7.750229 AAAGATCACAGCATAAGAGTTCAAA 57.250 32.000 0.00 0.00 0.00 2.69
4336 5882 8.721478 GTTAAAGATCACAGCATAAGAGTTCAA 58.279 33.333 0.00 0.00 0.00 2.69
4337 5883 7.334421 GGTTAAAGATCACAGCATAAGAGTTCA 59.666 37.037 0.00 0.00 0.00 3.18
4338 5884 7.464710 CGGTTAAAGATCACAGCATAAGAGTTC 60.465 40.741 0.00 0.00 0.00 3.01
4339 5885 6.313905 CGGTTAAAGATCACAGCATAAGAGTT 59.686 38.462 0.00 0.00 0.00 3.01
4340 5886 5.812642 CGGTTAAAGATCACAGCATAAGAGT 59.187 40.000 0.00 0.00 0.00 3.24
4341 5887 6.042777 TCGGTTAAAGATCACAGCATAAGAG 58.957 40.000 0.00 0.00 0.00 2.85
4342 5888 5.972935 TCGGTTAAAGATCACAGCATAAGA 58.027 37.500 0.00 0.00 0.00 2.10
4343 5889 5.235186 CCTCGGTTAAAGATCACAGCATAAG 59.765 44.000 0.00 0.00 0.00 1.73
4344 5890 5.105106 TCCTCGGTTAAAGATCACAGCATAA 60.105 40.000 0.00 0.00 0.00 1.90
4345 5891 4.404394 TCCTCGGTTAAAGATCACAGCATA 59.596 41.667 0.00 0.00 0.00 3.14
4346 5892 3.197766 TCCTCGGTTAAAGATCACAGCAT 59.802 43.478 0.00 0.00 0.00 3.79
4347 5893 2.565391 TCCTCGGTTAAAGATCACAGCA 59.435 45.455 0.00 0.00 0.00 4.41
4348 5894 3.190874 CTCCTCGGTTAAAGATCACAGC 58.809 50.000 0.00 0.00 0.00 4.40
4349 5895 3.447586 TCCTCCTCGGTTAAAGATCACAG 59.552 47.826 0.00 0.00 0.00 3.66
4350 5896 3.437213 TCCTCCTCGGTTAAAGATCACA 58.563 45.455 0.00 0.00 0.00 3.58
4351 5897 4.467198 TTCCTCCTCGGTTAAAGATCAC 57.533 45.455 0.00 0.00 0.00 3.06
4352 5898 4.775780 TCTTTCCTCCTCGGTTAAAGATCA 59.224 41.667 0.00 0.00 32.70 2.92
4353 5899 5.340439 TCTTTCCTCCTCGGTTAAAGATC 57.660 43.478 0.00 0.00 32.70 2.75
4354 5900 5.489249 GTTCTTTCCTCCTCGGTTAAAGAT 58.511 41.667 0.00 0.00 36.40 2.40
4355 5901 4.262765 GGTTCTTTCCTCCTCGGTTAAAGA 60.263 45.833 0.00 0.00 35.09 2.52
4356 5902 4.001652 GGTTCTTTCCTCCTCGGTTAAAG 58.998 47.826 0.00 0.00 0.00 1.85
4357 5903 3.391955 TGGTTCTTTCCTCCTCGGTTAAA 59.608 43.478 0.00 0.00 0.00 1.52
4358 5904 2.974099 TGGTTCTTTCCTCCTCGGTTAA 59.026 45.455 0.00 0.00 0.00 2.01
4359 5905 2.612000 TGGTTCTTTCCTCCTCGGTTA 58.388 47.619 0.00 0.00 0.00 2.85
4360 5906 1.430992 TGGTTCTTTCCTCCTCGGTT 58.569 50.000 0.00 0.00 0.00 4.44
4361 5907 1.430992 TTGGTTCTTTCCTCCTCGGT 58.569 50.000 0.00 0.00 0.00 4.69
4362 5908 2.237392 AGATTGGTTCTTTCCTCCTCGG 59.763 50.000 0.00 0.00 0.00 4.63
4363 5909 3.618690 AGATTGGTTCTTTCCTCCTCG 57.381 47.619 0.00 0.00 0.00 4.63
4364 5910 6.702282 CGTTATAGATTGGTTCTTTCCTCCTC 59.298 42.308 0.00 0.00 35.79 3.71
4365 5911 6.383147 TCGTTATAGATTGGTTCTTTCCTCCT 59.617 38.462 0.00 0.00 35.79 3.69
4366 5912 6.579865 TCGTTATAGATTGGTTCTTTCCTCC 58.420 40.000 0.00 0.00 35.79 4.30
4367 5913 7.385478 GGATCGTTATAGATTGGTTCTTTCCTC 59.615 40.741 0.00 0.00 35.79 3.71
4368 5914 7.217906 GGATCGTTATAGATTGGTTCTTTCCT 58.782 38.462 0.00 0.00 35.79 3.36
4369 5915 6.427242 GGGATCGTTATAGATTGGTTCTTTCC 59.573 42.308 0.00 0.00 35.79 3.13
4370 5916 7.171678 CAGGGATCGTTATAGATTGGTTCTTTC 59.828 40.741 0.00 0.00 35.79 2.62
4371 5917 6.992715 CAGGGATCGTTATAGATTGGTTCTTT 59.007 38.462 0.00 0.00 35.79 2.52
4372 5918 6.525629 CAGGGATCGTTATAGATTGGTTCTT 58.474 40.000 0.00 0.00 35.79 2.52
4373 5919 5.511545 GCAGGGATCGTTATAGATTGGTTCT 60.512 44.000 0.00 0.00 38.57 3.01
4374 5920 4.691216 GCAGGGATCGTTATAGATTGGTTC 59.309 45.833 0.00 0.00 0.00 3.62
4375 5921 4.505039 GGCAGGGATCGTTATAGATTGGTT 60.505 45.833 0.00 0.00 0.00 3.67
4376 5922 3.008049 GGCAGGGATCGTTATAGATTGGT 59.992 47.826 0.00 0.00 0.00 3.67
4377 5923 3.007940 TGGCAGGGATCGTTATAGATTGG 59.992 47.826 0.00 0.00 0.00 3.16
4378 5924 4.271696 TGGCAGGGATCGTTATAGATTG 57.728 45.455 0.00 0.00 0.00 2.67
4379 5925 4.974645 TTGGCAGGGATCGTTATAGATT 57.025 40.909 0.00 0.00 0.00 2.40
4380 5926 4.974645 TTTGGCAGGGATCGTTATAGAT 57.025 40.909 0.00 0.00 0.00 1.98
4381 5927 4.163458 ACTTTTGGCAGGGATCGTTATAGA 59.837 41.667 0.00 0.00 0.00 1.98
4382 5928 4.451900 ACTTTTGGCAGGGATCGTTATAG 58.548 43.478 0.00 0.00 0.00 1.31
4383 5929 4.497291 ACTTTTGGCAGGGATCGTTATA 57.503 40.909 0.00 0.00 0.00 0.98
4384 5930 3.366052 ACTTTTGGCAGGGATCGTTAT 57.634 42.857 0.00 0.00 0.00 1.89
4385 5931 2.871096 ACTTTTGGCAGGGATCGTTA 57.129 45.000 0.00 0.00 0.00 3.18
4386 5932 1.995376 AACTTTTGGCAGGGATCGTT 58.005 45.000 0.00 0.00 0.00 3.85
4387 5933 2.871096 TAACTTTTGGCAGGGATCGT 57.129 45.000 0.00 0.00 0.00 3.73
4388 5934 4.718940 AATTAACTTTTGGCAGGGATCG 57.281 40.909 0.00 0.00 0.00 3.69
4389 5935 5.891551 TCCTAATTAACTTTTGGCAGGGATC 59.108 40.000 0.00 0.00 0.00 3.36
4390 5936 5.837829 TCCTAATTAACTTTTGGCAGGGAT 58.162 37.500 0.00 0.00 0.00 3.85
4391 5937 5.263872 TCCTAATTAACTTTTGGCAGGGA 57.736 39.130 0.00 0.00 0.00 4.20
4392 5938 5.993748 TTCCTAATTAACTTTTGGCAGGG 57.006 39.130 0.00 0.00 0.00 4.45
4393 5939 9.936759 TTAATTTCCTAATTAACTTTTGGCAGG 57.063 29.630 0.00 0.00 39.88 4.85
4410 5956 8.433599 GCTCCTACTCCTAATTCTTAATTTCCT 58.566 37.037 0.00 0.00 32.38 3.36
4411 5957 8.433599 AGCTCCTACTCCTAATTCTTAATTTCC 58.566 37.037 0.00 0.00 32.38 3.13
4412 5958 9.267084 CAGCTCCTACTCCTAATTCTTAATTTC 57.733 37.037 0.00 0.00 32.38 2.17
4413 5959 8.993424 TCAGCTCCTACTCCTAATTCTTAATTT 58.007 33.333 0.00 0.00 32.38 1.82
4414 5960 8.554490 TCAGCTCCTACTCCTAATTCTTAATT 57.446 34.615 0.00 0.00 34.90 1.40
4415 5961 8.554490 TTCAGCTCCTACTCCTAATTCTTAAT 57.446 34.615 0.00 0.00 0.00 1.40
4416 5962 7.620094 ACTTCAGCTCCTACTCCTAATTCTTAA 59.380 37.037 0.00 0.00 0.00 1.85
4417 5963 7.126733 ACTTCAGCTCCTACTCCTAATTCTTA 58.873 38.462 0.00 0.00 0.00 2.10
4418 5964 5.961421 ACTTCAGCTCCTACTCCTAATTCTT 59.039 40.000 0.00 0.00 0.00 2.52
4419 5965 5.524535 ACTTCAGCTCCTACTCCTAATTCT 58.475 41.667 0.00 0.00 0.00 2.40
4420 5966 5.862678 ACTTCAGCTCCTACTCCTAATTC 57.137 43.478 0.00 0.00 0.00 2.17
4421 5967 7.922699 ATAACTTCAGCTCCTACTCCTAATT 57.077 36.000 0.00 0.00 0.00 1.40
4422 5968 7.565398 TGAATAACTTCAGCTCCTACTCCTAAT 59.435 37.037 0.00 0.00 36.46 1.73
4423 5969 6.895756 TGAATAACTTCAGCTCCTACTCCTAA 59.104 38.462 0.00 0.00 36.46 2.69
4424 5970 6.432581 TGAATAACTTCAGCTCCTACTCCTA 58.567 40.000 0.00 0.00 36.46 2.94
4425 5971 5.273208 TGAATAACTTCAGCTCCTACTCCT 58.727 41.667 0.00 0.00 36.46 3.69
4426 5972 5.599999 TGAATAACTTCAGCTCCTACTCC 57.400 43.478 0.00 0.00 36.46 3.85
4427 5973 7.065204 CCTTTTGAATAACTTCAGCTCCTACTC 59.935 40.741 0.00 0.00 42.19 2.59
4428 5974 6.881602 CCTTTTGAATAACTTCAGCTCCTACT 59.118 38.462 0.00 0.00 42.19 2.57
4429 5975 6.879458 TCCTTTTGAATAACTTCAGCTCCTAC 59.121 38.462 0.00 0.00 42.19 3.18
4430 5976 7.016153 TCCTTTTGAATAACTTCAGCTCCTA 57.984 36.000 0.00 0.00 42.19 2.94
4431 5977 5.880901 TCCTTTTGAATAACTTCAGCTCCT 58.119 37.500 0.00 0.00 42.19 3.69
4432 5978 5.392487 GCTCCTTTTGAATAACTTCAGCTCC 60.392 44.000 0.00 0.00 42.19 4.70
4433 5979 5.182001 TGCTCCTTTTGAATAACTTCAGCTC 59.818 40.000 0.00 0.00 42.19 4.09
4434 5980 5.048434 GTGCTCCTTTTGAATAACTTCAGCT 60.048 40.000 0.00 0.00 42.19 4.24
4435 5981 5.048434 AGTGCTCCTTTTGAATAACTTCAGC 60.048 40.000 0.00 0.00 42.19 4.26
4436 5982 6.205464 TGAGTGCTCCTTTTGAATAACTTCAG 59.795 38.462 0.00 0.00 42.19 3.02
4437 5983 6.061441 TGAGTGCTCCTTTTGAATAACTTCA 58.939 36.000 0.00 0.00 39.62 3.02
4438 5984 6.560253 TGAGTGCTCCTTTTGAATAACTTC 57.440 37.500 0.00 0.00 0.00 3.01
4439 5985 6.716628 TGATGAGTGCTCCTTTTGAATAACTT 59.283 34.615 0.00 0.00 0.00 2.66
4440 5986 6.240894 TGATGAGTGCTCCTTTTGAATAACT 58.759 36.000 0.00 0.00 0.00 2.24
4441 5987 6.500684 TGATGAGTGCTCCTTTTGAATAAC 57.499 37.500 0.00 0.00 0.00 1.89
4442 5988 6.348458 CGTTGATGAGTGCTCCTTTTGAATAA 60.348 38.462 0.00 0.00 0.00 1.40
4443 5989 5.122239 CGTTGATGAGTGCTCCTTTTGAATA 59.878 40.000 0.00 0.00 0.00 1.75
4444 5990 4.083110 CGTTGATGAGTGCTCCTTTTGAAT 60.083 41.667 0.00 0.00 0.00 2.57
4445 5991 3.250762 CGTTGATGAGTGCTCCTTTTGAA 59.749 43.478 0.00 0.00 0.00 2.69
4446 5992 2.807967 CGTTGATGAGTGCTCCTTTTGA 59.192 45.455 0.00 0.00 0.00 2.69
4447 5993 2.807967 TCGTTGATGAGTGCTCCTTTTG 59.192 45.455 0.00 0.00 0.00 2.44
4448 5994 2.808543 GTCGTTGATGAGTGCTCCTTTT 59.191 45.455 0.00 0.00 0.00 2.27
4449 5995 2.224281 TGTCGTTGATGAGTGCTCCTTT 60.224 45.455 0.00 0.00 0.00 3.11
4450 5996 1.344438 TGTCGTTGATGAGTGCTCCTT 59.656 47.619 0.00 0.00 0.00 3.36
4451 5997 0.969149 TGTCGTTGATGAGTGCTCCT 59.031 50.000 0.00 0.00 0.00 3.69
4452 5998 1.728971 CTTGTCGTTGATGAGTGCTCC 59.271 52.381 0.00 0.00 0.00 4.70
4453 5999 1.127582 GCTTGTCGTTGATGAGTGCTC 59.872 52.381 0.00 0.00 0.00 4.26
4454 6000 1.151668 GCTTGTCGTTGATGAGTGCT 58.848 50.000 0.00 0.00 0.00 4.40
4455 6001 1.151668 AGCTTGTCGTTGATGAGTGC 58.848 50.000 0.00 0.00 0.00 4.40
4456 6002 2.668457 GGTAGCTTGTCGTTGATGAGTG 59.332 50.000 0.00 0.00 0.00 3.51
4457 6003 2.563179 AGGTAGCTTGTCGTTGATGAGT 59.437 45.455 0.00 0.00 0.00 3.41
4458 6004 2.926200 CAGGTAGCTTGTCGTTGATGAG 59.074 50.000 0.00 0.00 0.00 2.90
4459 6005 2.299013 ACAGGTAGCTTGTCGTTGATGA 59.701 45.455 0.00 0.00 0.00 2.92
4460 6006 2.688507 ACAGGTAGCTTGTCGTTGATG 58.311 47.619 0.00 0.00 0.00 3.07
4461 6007 3.402628 AACAGGTAGCTTGTCGTTGAT 57.597 42.857 0.00 0.00 0.00 2.57
4462 6008 2.902705 AACAGGTAGCTTGTCGTTGA 57.097 45.000 0.00 0.00 0.00 3.18
4463 6009 3.311322 TCAAAACAGGTAGCTTGTCGTTG 59.689 43.478 0.00 0.00 0.00 4.10
4464 6010 3.537580 TCAAAACAGGTAGCTTGTCGTT 58.462 40.909 0.00 0.00 0.00 3.85
4465 6011 3.131396 CTCAAAACAGGTAGCTTGTCGT 58.869 45.455 0.00 0.00 0.00 4.34
4466 6012 2.096218 GCTCAAAACAGGTAGCTTGTCG 60.096 50.000 0.00 0.00 32.18 4.35
4467 6013 2.226674 GGCTCAAAACAGGTAGCTTGTC 59.773 50.000 0.00 0.00 35.30 3.18
4468 6014 2.230660 GGCTCAAAACAGGTAGCTTGT 58.769 47.619 0.00 0.00 35.30 3.16
4469 6015 2.997485 GGCTCAAAACAGGTAGCTTG 57.003 50.000 0.00 0.00 35.30 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.